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Query: IDP05226 putative membrane associated lipoprotein [Listeria monocytogenes EGD-e] lmo0460 [Listeria monocytogenes EGD-e], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKKLSMRVILIVTIIFIACGSANVSIAQERDTTNILPEEELDSLYTSNLITEEVAQDKPAEVENLEEAPITEDLVQNPDVLEQPIADSDDSDLTVVNSGDFWTIYRNTVNGEYSLHMFGNVPSSKPTAWNSYLNRIKHIEIEEATLTGNFSSYFRNNVFTVLESVRIERSNLSRVTSFALAFYSSGIEKVIIRDNNYPTAPSLLTTEGMFKNCSNLMEVDLSGLDTSAVTTMWDMFNSCRALEELDVSHFDTSSVTNMSYMFYDNRNLEVLDVSNLDTSSVTNMYAMFEDCTSLEELDVSHFDTSSVTDMYRVFNGCEKLKKLDVSNFDTSSATAMVQMFRNCSALEKLDVSNFNTSLVTDMRAMFAGCTSLEALDVSNFDTSSVTNMAAMFSDNEKVEKLDLSTFDTSSVTNMGTMFKNCTALKSLYLDNFTHAASSTDMFTGTTSLSYLFVSHNVSNFNGLENTNWYDEKNWVQFETLSQLQTYHRKQSEPTGYRKGAFLSLTMDAMGGQFEDAEEQKVQNKFSGEYWEEVIPVKEGHYFDGWYLNQDCTNKFDFSLPADASITIYAKWIENYTVIIPASISLNETSELKVEGINRGDKNLSVGLNRTATSISESNKLTLTNTADTTVQCLAPLSWDGSETNPEKAILTLTPGSEITEGDAVMNISIPENIQAGKYTGNLVFSIKYELast
1 -134.000IDP05226 putative membrane associated lipoprotein [Listeria monocytogenes EGD-e] lmo0460 [Listeria monocytogenes EGD-e]  ali  100  1MKKLSMRVILIVTIIFIACGSANVSIAQERDTTNILPEEELDSLYTSNLITEEVAQDKPAEVENLEEAPITEDLVQNPDVLEQPIADSDDSDLTVVNSGDFWTIYRNTVNGEYSLHMFGNVPSSKPTAWNSYLNRIKHIEIEEATLTGNFSSYFRNNVFTVLESVRIERSNLSRVTSFALAFYSSGIEKVIIRDNNYPTAPSLLTTEGMFKNCSNLMEVDLSGLDTSAVTTMWDMFNSCRALEELDVSHFDTSSVTNMSYMFYDNRNLEVLDVSNLDTSSVTNMYAMFEDCTSLEELDVSHFDTSSVTDMYRVFNGCEKLKKLDVSNFDTSSATAMVQMFRNCSALEKLDVSNFNTSLVTDMRAMFAGCTSLEALDVSNFDTSSVTNMAAMFSDNEKVEKLDLSTFDTSSVTNMGTMFKNCTALKSLYLDNFTHAASSTDMFTGTTSLSYLFVSHNVSNFNGLENTNWYDEKNWVQFETLSQLQTYHRKQSEPTGYRKGAFLSLTMDAMGGQFEDAEEQKVQNKFSGEYWEEVIPVKEGHYFDGWYLNQDCTNKFDFSLPADASITIYAKWIENYTVIIPASISLNETSELKVEGINRGDKNLSVGLNRTATSISESNKLTLTNTADTTVQCLAPLSWDGSETNPEKAILTLTPGSEITEGDAVMNISIPENIQAGKYTGNLVFSIKYE 689
2 -21.000IDP05553 hypothetical protein lmo1136 [Listeria monocytogenes EGD-e] lmo1136 [Listeria monocytogenes EGD-e]  ali follow..  15  25..................................................................................................................................TKPHTVEAEIVYSLTNPKPVNEIFTDPKLAQVVADWLKLPAATSSVTQTQL------NTIKALHFDSKGVQSLEGVEYL----KNLTQVFGYGNQVSDLGPLSNL----TKLEVIQMPRNQISDLTPIANL----TALMSLDFEFNNLQTIEPIKNL----TNMLELNVSANPISDINAVKNM----TQLEFLTLRDCEVSDLSPVENL----SNMLMFWAGRNNISDITPLKNM----SKLLGLSLFGNQIKDVSVIKNL----TSLEDFDIKANQVSDISSLATS----TTLETLTLSF-NQIIDISPL-KNLTNLTRLELENQTRALDAVEID............................................................................................................................................................................................................................... 316
3 -20.600IDP05699 hypothetical protein lmo2396 [Listeria monocytogenes EGD-e] lmo2396 [Listeria monocytogenes EGD-e]  ali follow..  11  36..............................................................................................................................................DPVLNSGLKNIIGNPFLDEITEANMATITVADLSNMSGA-------------PGYPVTGLIKDLTGL-DKAVNMTKLYFS--NQSQIKNLDKI-KNLPNLKKIVAVTTGLNNISALGEM----PALEEVELGGDYITDFTPLLEK----ENLTSFSYNSYAWSNPAYHQINFTKLKSLVKLDLTWNNITDLSPLTEN----DHITNLNLNYNQFTNVAPIATM----KNLKVLYLNNNNLTSIDALNTL----RGLTIAYADNNNITDLSNLKNF................................................................................................................................................................................................................................................................................ 279
4 -19.500IDP05423 gene: inlH; internalin H [Listeria monocytogenes EGD-e] lmo0263 [Listeria monocytogenes EGD-e]  ali follow..  11  1................................................................................................................................MKKRWNSVFKLVLMVTAILGLSLYVTTSQGVEVRAESITQPTAINVIFPDPAL------ANAIKIAAGKSNVTDTVTQADL----DGITTLSAFGTGVTTIEGVQYL----NNLIGLELKDNQITDLTPLKNL----TKITELELSGNPLKNVSAIAGL----QSIKTLDLTSTQITDVTPLAGL----SNLQVLYLDLNQITNISPLAGL----TNLQYLSIGNAQVSDLTPLANL----SKLTTLKADDNKISDISPLASL----PNLIEVHLKNNQISDVSPLANT----SNLFIVTLTN-QTITNQPVFYQNNLVVPNVVKGPSGAPIA.................................................................................................................................................................................................................................... 290
5 -19.500IDP00034 internalin, putative BA_1346 [Bacillus anthracis str. Ames]  ali follow..  18  2.........................................................................................................................................FLNTNEILDYSALKYM------PNLKSLTVANAKIKDPSFFANL------KQLNHLALRGNEFSDVTPLVKM----DHLDSLDLSNNKITNVAPLIEM----KNVKSLYLSGNQIEDVTALAKM----EQLDYLNLANNKITNVAPLSAL----KNVTYLTLAGNQIEDIKPLYSL-----PLTDLVLTRNKVKDLSGIEQM----KQLEELWIGKNEIKDVTPLSKM----TQLKQLHLPNNELKDITPLSSL----VNLQKLDLEANYISDLTPASNL----KKLVFLSFVA-NEIRDVRPV-IELSKTAYINVQNQVFLEETEVNK............................................................................................................................................................................................................................... 280
6 -19.200IDP00005 internalin, putative BA_0552 [Bacillus anthracis str. Ames]  ali follow..  10  200..................................................................................................................................EDLKEIKELNIYAGQGIESLKGL---EYMENLERITIQGSDVRNIAPISQL------KRLKVVDLSFNKIENVEPLVNL----EKLDILELQNNRIADVTPLSQL----KKVRTINLSGNKISDIKPLYNV----SSLRKLYVSNNKITDFTGIEQL----NKLGTLGVGSNGLVNIEPISQM----SGIVELNLEKNDIKDITSLSKL----TGLQSLNLEENYVSDVSSLSNL----INLYELKLATNEIRDIRPIQEL----GKRIKIDAQR---QKVFLDEAYMNEEVKIPVYDVNGKSEGGSITNGVIKWNSLGEKMYE-DMKLRQYMNKHNFERKNVNTPITKEDLLTVKALKITDGKKEGITDFNVEELTLQNVNMKNAEFISSLRNLKSVDLSYNQIEDIKPLHSLEDLEKLNVSDNGIKNVPELFKM--------HQLENLDALLVNNNEINNLDEISKVSKLNKLEMMSNKVRDISPLA---------SLKNLQWLNLSDNKIQDISTLSSMLDLLSLKLAGNEIRDVRPVIQL----AQWITVDIK.. 758
7 -19.100IDP02569 gene: inlE; internalin E [Listeria monocytogenes EGD-e] lmo0264 [Listeria monocytogenes EGD-e]  ali follow..  13  40...............................................................................................................................................................................TPINEIFTDPVLTDNVKTLLGKADVTDEVTQTDL----DSVTHLSAKSAGITTIEGLQYL----TNLSELELIDNQVTDLNPLTNL----TKITELRLSGNPLKDVSALAGL----KNLKTMDLIYTDITDVTPLAGL----SNLQVLNLDINQITDITPLAGL----SNLQFLSFGSTQVSDLTPLANL----SKLTTLNAMNSKVSDVSPLTGL----SNLTEVYLEENQISDVSPLAKL----PNLSIVTLTN-QTITNQPVFYQNKPIVPNVVTGLSGELIA.................................................................................................................................................................................................................................... 288
8 -18.800IDP05663 hypothetical protein lmo0333 [Listeria monocytogenes EGD-e] lmo0333 [Listeria monocytogenes EGD-e]  ali follow..  13  257AQGCNIKTLELKNPAGAVLPELETFYLQENDLTNLTSLAKLPKLKNLYIKGNASLKSTKLQLIDASNCTDLETLGDISGLSELEMIQLSGCSKLKEITSLKNLPNLVNI--TADSCAIEDLGTLN------NLPKLQTLVLSDNENLTNITAI---TDLPQLKTLTLDGCGITSIGTLDNL------PKLEKLDLKENQITSISEITDL----PRLSYLDVSVNNLTTIGDLKKL----PLLEWLNVSSNRLSDVSTLTNF----PSLNYINISNNVIRTVGKMTEL----PSLKEFYAQNNSISDISMIHDM----PNLRKVDASNNLITNIGTFDNL----PKLQSLDVHSNRITSTSVIHDL----PSLETFNAQTNLITNIGTMDNL----PDLTYVNLSFNRIPSLAPIGDL----PNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNLSDLTNLTELNLRNNVYIDDISGLSTLS-------RLIYLNLDSNKIEDISALSNL----------TNLQELTLENNKIENISALSDLENLNKLVVSKNKIIDISPVANM........................................................................................................................... 772
9 -18.700IDP01745 hypothetical protein lmo2821 [Listeria monocytogenes EGD-e] lmo2821 [Listeria monocytogenes EGD-e]  ali follow..  15  10.....................................................................................................................................................................SLVSLTMVSNPLLTFAATNDV-------IDNTTEITTDKETSSTQPTIKNTLKAGQTQSFNDWFPD--------DNFASEVAAAFEMQATDTIS--EEQLATLTSLDCHNSSITDMTGIEKL----TGLTKLNITTLDLSQNTNLTYLACDSNKLTNLDV-----TPLTKLTYLNCDTNKLTKLDVSQ-----NPLLTYLNCARNTLTEIDVSHLDVTPQTQLTTLDCSFNKITELDVSQLDLNQNIQLTFLDCSSNKLTEI---DVTPLTQLTYFDCSVNPLTEL----DVSTLSKLTTL............................................................................................................................................................................................................................... 310
10 -18.200IDP05076 hypothetical protein lmo0801 [Listeria monocytogenes EGD-e] lmo0801 [Listeria monocytogenes EGD-e]  ali follow..  15  58...............................................................................................................................................................KSLNLKKLNKKSTSDTVTQTEL---------SLTGSFQAINKGIKSIEGV-EYLQNITELDVEKNQITDIAPVANL----KKLTTLLINTNQITDISPVADL----ANLTTFYCGNNPISDISAVQNL----TKLSIFNCYTANVEDISPVKNL----VNLKTLSLGSNNIHDISDIEKL----TALEYLSFSNNPVENPEVIGNL----TNLNTLWLYNAQIRNIDFTANL----PKLKSVYLYNNQISNISEVSNW----ANIEYLELNN-NQITDITPV-ANLTTLKTLKLNDQ......................................................................................................................................................................................................................................... 311
11 -17.900IDP91680 INLB_LISMO [Listeria monocytogenes]  ali follow..  13  1.................................................................................................................................................................MKEKHNPRRKYCLISGLAIILWIIIGNGAKVQAETITVPTPIKQIFSD-DAFAETIKDNLKKKSVTDAVTQNEL----NSIDQIIANNSDIKSVQGIQYL----PNVTKLFLNGNKLTDIKPLANL----KNLGWLFLDENKVKDLSSLKDL----KKLKSLSLEHNGISDINGLVHL----PQLESLYLGNNKITDITVLSRL----TKLDTLSLEDNQISDIVPLAGL----TKLQNLYLSKNHISDLRALAGL----KNLDVLELFSQSNLVVPNTVKNTDGSLVTPEIISDDGDYEKPN................................................................................................................................................................................................................................. 282
12 -17.800IDP05666 gene: inlA; internalin A [Listeria monocytogenes EGD-e] lmo0433 [Listeria monocytogenes EGD-e]  ali follow..  16  2.................................RKKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPIN-----------QIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQAD---EYLNNLTQINFSN----NQLTDITPLKNLTKLVDILMNNNQIADITPLANL------TNLTGLTLFNNQITDIDPLKNL----TNLNRLELSSNTISDISALSGLLANLTTLERLDISSNKVSDISVLAKL----TNLESLIATNNQISDITPLGIL----TNLDELSLNGNQLKDIGTLASL----TNLTDLDLANNQISNLAPLSGL----TKLTELKLGANQISNISPLAGL----TALTNLELNENQLEDISPISNL----KNLTYLTLYFNNISDISPVSSL----TKLQRLFFYNLANLTNINWLSAGHNQISDLTPLANLTRITQLG................................................................................................................................................................................................................................. 411
13 -16.300IDP05426 hypothetical protein lmo0610 [Listeria monocytogenes EGD-e] lmo0610 [Listeria monocytogenes EGD-e]  ali follow..  13  37...............................................................................................................................................................................AQDVVNIPDPALKSYLNGLLGQPSTSDITE-----AQMDTITDVTISNASLTDLTGLDYA----HNLTILHLTNTGVTDYSLVANI----PSLTNLNISGSNLTTIPDLNGL----TNVTNLNLSSLDNSALTKFNKL----PNLTFLNLDN--NPSITDFMPL-KSLPNLASLFIQFCGVNDFRGIDSF----PKLTNLAAFGQNVGSAILINST----IKSSALNYNEANQTIFVPFTLM................................................................................................................................................................................................................................................................................ 250
14 -16.300IDP05549 hypothetical protein lmo0549 [Listeria monocytogenes EGD-e] lmo0549 [Listeria monocytogenes EGD-e]  ali follow..  13  6...............................................................................................................................................................KVVLLFVLILAFIVPVYSKAVE---TGKEVPKSPELLDDKSSTLKNVNTP----KNLKASPLTIPANSTIADLF---TENNNFQTPTKTDWKVDDVVTEVEL----NRMWYLTSVA----TIGSIEGI-QYLPNLYDVRLQDKQCKDLSPFLKAPNGYSQLYRLNINNGNISDISPLTEL--SAPTLNDIDLGGNNISDLSLFPKLPNKFPNLEEISLERNNISDVSPLAKF--ASTKIKIFNLDE---NHITDLSSL-NKMPNLQRLYVRY.................................................................................................................................................................................................................................................................. 268
15 -16.200IDP02440 hypothetical protein lmo0331 [Listeria monocytogenes EGD-e] lmo0331 [Listeria monocytogenes EGD-e]  ali follow..  16  2..........................................................................................................................................................................KLSKILTIIVL--SATVTSSLPIPMVKAESTTANEMKTE----NQLLKTDKEKTPNNNLKNQLVQAGTKTYNDYFPDDNLNKNADESVT--VEELAKVTKLDARSQGIEDSTGIEYL----TGLEVLNLKSIDVSKNLNLKELTCSNNPLANLDVSKLDVSQNTALEYLYCPRNQLTKLDVSKLDVSKNPALTNLGCTKNQLTDLDVSQLDVSQNQALENLACDNNELKNIDINQLDTTQNLALEILYCDDNQLTDL---DVRKNVNLLILFCNNNQLTNLAVGETIAKV..................................................................................................................................................................................................................................... 358
16 -16.100IDP01994 hypothetical protein lmo1290 [Listeria monocytogenes EGD-e] lmo1290 [Listeria monocytogenes EGD-e]  ali follow..  15  34..........................................................................................................................................................................PGLKASQDNVNIPDSTFKAYLNGLLGQASTANITE-----AQMDSLTYITLANINVTDLTGIEYA----HNIKDLTINNIHATNYNQISGL----SNLERLRIMGADVTSIPNLSGL----TNLTLLDLSH-DDSILTKINTL----PKVTSIDLSY--NGAITDIMPL-KTMPELKSLNIQFDGVHDYRGIEDF----PKLNTLLAYSQTIGGKKLINSD----IKSSKLTYNAENQTLYVPFSLM................................................................................................................................................................................................................................................................................ 252
17 -15.700IDP05656 hypothetical protein lmo0171 [Listeria monocytogenes EGD-e] lmo0171 [Listeria monocytogenes EGD-e]  ali follow..  10  95...............................................................................................................................................................................KTYAELFPDVNLAKIIAKNISG-DINAEVSEAEL----QTITNLVATNQNITSLTGIEHL----TALENINVNN---NELTTIDSL-FNIPTLKSISANN---NKITGNFSLVKTLPELHTLEITELDIENQPNLVTLSADELELKKLTLK--NLSQLNGLGRI-ASSISIDWGDLESVTLMNLPEIISVDISGNYLDSDDIH---LENLPAVKNLDISSNELTRLP----KINDFPLLTTINVRSNKIDRLESSKLVDVPKLATLNADKQAVT................................................................................................................................................................................................................................................ 349
18 -15.600IDP05548 hypothetical protein lmo0409 [Listeria monocytogenes EGD-e] lmo0409 [Listeria monocytogenes EGD-e]  ali follow..  13  10........................................................................................QITTIMTVVSLLIMVLGIQGNNDVKAAPQVAPPASINQIFPDADLAEGIRAELQK----SSVTDVVTKEELESISQLSVYAKKIASIEGLEYL------TNLKFLNLNGNQITDLSPLSNL----TKLTEIYIGDNKISDISPLQNL----TNVTDLYLVDNDISDLRPLANL----TQMYSLRLGG---NSNISDLNPVRNMTRLNNLEVTGSILKDLTPLADV----TSLTRLTLSDNQIEDLSPLAGL----TKLDNIAAYSNKITDITPVTNL----TRLQYLDLGSNEITDLSPVANL----QKLTSLHLANNQITNISMLEDL----TNLTSLGLQNLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQ................................................................................................................................................................................................................................. 348
19 -15.200IDP01918 hypothetical protein lmo0514 [Listeria monocytogenes EGD-e] lmo0514 [Listeria monocytogenes EGD-e]  ali follow..  13  19...............................................................................................................................................................YPSTAAHAEETNIVNIPD-------ANLKTYLNGLLKQASDAPITK-----TQMNTIQTVTLSGSTYTDLTGLEEA----GNLVTLSLNNTNIQTLEPIKNQ----TSLTYLTVGG---DNVKDSLVDLNGLVNLQSLSING---SEVTHNVKTFNKLPKLTYLYAQ--NSMKITDISAL-ASLPALTTLFLQFDGIDDFRPLNDF----ESFKNGNLKALAAFGTGRTNPR----ITLKSGKLDYNETNQTLYLPFS-MMPKPLTSFD..................................................................................................................................................................................................................................................................... 253
20 -15.000IDP92552 gene: NOD2; nucleotide-binding oligomerization domain-containing protein 2 [Homo sapiens] NP_071445 [Homo sapiens]  ali follow..  12  746......................................................................................................................................................................LYEMQEERLARKAARGLNVGHLKLTFCSVG---PTECAALAFVLQHLRRPVALQLDYNSVGD-IGVEQLLPCLGVCKALYLRNISDRGICKLIECALHCEQLQKLALNKLTDGCAHSMAKLLACRQNFLALRLGYITAAGAQVLAEGLRGNTSLQFLGFWRVGDEGAQALAEALGDHQSLRWLSLVGNNIGSAQALALMLAKNVMLEELCLEHLQDEGVCSLAEGLKKNSSLKILKLSCITYLGAEALLQALERNDTILEVWLRNTFSLEEVDKLGCRDTRLL................................................................................................................................................................................................................................................ 1039
21 -15.000IDP05561 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo2026 [Listeria monocytogenes EGD-e]  ali follow..  10  3.....................................................................................................................................................................................................................KKFVYLLLLV---LFMTVLPFQMLEAQAASTSWIEQ-ELDGNEPFIAETEKILSKNRQTIQKIHVFGADSIPNKISDYKNLTALEANY---GTITEVPESVGSLKELVTLNVDE---NNLQEFPMVIFQLPKLEVLYISRGNITEIPTEITTL--ASHLKVLDVSNQKLVTIPDSILTTNWKAMHDGKLGMSLAGNQIASDIPA................................................................................................................................................................................................................................................................................ 202
22 -13.900IDP95476 internalin [Listeria monocytogenes EGD-e] NP_465993 [Listeria monocytogenes EGD-e]  ali follow..  15  39...............................................................................................................................................................................APIIDVFPDDGLAKDMAKNLNKDSVNDVIDQDDL----DALTGLGFETSTITN---ERAMFNNVTDVSIMEFGA-KLTEFPDITTI----PHLKTLFFADPPGRLTRNLSPNYQNYPEMDTITMSG---NNLIGSIPDFTGMPALKQLYMSEMLITSD--ELPNFNNIPLLITLDLSSNQLTTIPDFQNI----PNLTFLDLNANLLTNTPDFQNL----PKLTDLNLRH---NNLTGTMVNYTNLPSLESLNLDY-NFLTELPSNVLDTIYVQSQNGE........................................................................................................................................................................................................................................... 295
23 -13.900IDP05081 putative cell surface protein, internalin proteins [Listeria monocytogenes EGD-e] lmo2027 [Listeria monocytogenes EGD-e]  ali follow..  13  39...............................................................................................................................................................................APIIDVFPDEGLAKDMAKNLNKDSVNDVIDQDDL----DALTGLGFETETITNMQLLERAMFNNVNIVSVMEFGEDLTEFPDISTI----PHLNTLFFNTPPEGVTRNLS--YQNYPEMVTITMSG---SNLIGAIPDFTGMPDLSQLYMADMMITSDD---PDFHTIPKLSTLDLSHNQLTNLPDFQNL----TNLAELNLSF---NNLTNTMTNFTNLSNLNNLNLDY---NHLNELPSNVLNSIFIENQSGTVPDQIIKQGET........................................................................................................................................................................................................................................................ 284
24 -13.800IDP02661 hypothetical protein lmo1289 [Listeria monocytogenes EGD-e] lmo1289 [Listeria monocytogenes EGD-e]  ali follow..  13  26................................................................................................................................................................SLPSFAAEEIALKESQDVV-NIPDPQLKKELNLYLNQAENADITE-----AQMATFRNITLN----SGIKDLTGI-EYLKNITTLSINN-INASYEPIQTL----SSLEKLVINGENVNAIPDLSVL----SNLTFLDLSR---TNIDDTISKISNIPNLNKLDISN-GITKISELNNL----PSLQELRVSDCQITNFKGIEKF----PNLTAFYGDG---QLFGIDSFETDGFKNIKSSELTFDANAKTLFVPFSIVTVNTILNYD..................................................................................................................................................................................................................................................................... 263
25 -13.400IDP02719 gene: inlG; internalin G [Listeria monocytogenes EGD-e] lmo0262 [Listeria monocytogenes EGD-e]  ali follow..  12  2......................................................................................................................................................................................................KQRKTSVLHVL-LVVTAILGISLWVNASHGMK----------AQAESIAQPAPINEIFTDPAL----ADEVKTELGKTSVTDEVTQTDL----NQITKLEADDKGINSIEGIQYL----TNLNMLGVSSNQITNITPLANL----TNLDSLYLGDNKISDVTPLSGL----TQLTFVQLSINQIKDVTPLANL----TKLNYLDLRENQISDASPLVNM----TDLTVLHLEK-QQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNNGTFASPNITWNLDSITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSS............................................. 424
26 -12.900IDP91625 gene: ECs2073; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB35496 [Escherichia coli O157:H7 str. Sakai]  ali follow..  10  5.................................................................................................................................................................SIFNKIKPQSIQQHPEKNQLNWMLELNKWKE------ERILTGEIHRPECRNEAAKRINCAFLSKQN-LNLSTQPPGLQNFTSINLTHFDATNYDRLVKLSLNSNTLESINIHQGRNVSITHIS--------MNNNCLRNIDIDRLSSITYFSAAHNKLEFVQL-----ESCEWLQYLNLSHNQLTDIVTGN-----KEELLLLDLSHNKLASLHNALFNNNLLSEIKMFYSNFCKVQTLNAAN-FLTYLSSIKSLRLDNNKITRIDTENTSDIRSLFPIIKKSESLNFL----NISGENNCPTI............................................................................................................................................................................................................................... 307
27 -12.600IDP95186 gene: lmo2445; lmo2445 [Listeria monocytogenes EGD-e] CAD00523 [Listeria monocytogenes EGD-e]  ali follow..  14  18...............................................................................................................................................................................APIIEAFPVEAIAEAIAGELDKDSVNDTITQADL--TAIPLPSLGLTGEDLSVLNN-------FTNAIELAIWS---NNIGELPDLSEALPALENIEANG---ANITVF----ANYPNLTNVDLSQ---NNFGFNIPKFVGMEGLVSINMENAGLSGYI--EDIWMNMPNLDSLILNE---NHLISIPEDIFLSQQLGTHSFAN---QTATYPPTTIKQGENLKVFVPFIYQALDFIAPS.................................................................................................................................................................................................................................................................................. 235
28 -11.600IDP01916 hypothetical protein lmo0327 [Listeria monocytogenes EGD-e] lmo0327 [Listeria monocytogenes EGD-e]  ali follow..  14  2.......................................................................................................................................................................................................................LKKIFIALIALVVIINTTSVSASTPTWLEQTMNNNEPFIKEIETETGKTRANITQTDLEAITALRVTGASDIPANIDMLTHLTLLKAVQGTISSVPNSVGNLKELKILNLNT---NHLSNFPTIVYQLPKLEELQLNDGTIEEIPA--TITNMASHLKFLTVNNNRLVKVTIIFSTNWSNSSTGELDLFTTGNQIVTDIP.................................................................................................................................................................................................................................................................................. 200
29 -11.400IDP91566 gene: ECs1568; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB34991 [Escherichia coli O157:H7 str. Sakai]  ali follow..  17  4........................................................................................................................................................................................................TSQLRPT--GTFCSYSAETS----ADIKSEITPIQIEEARASGRLYIKDCDIEYLPQL-------NEITSVTIE--NCNNLTTLTGL----VNTQNLSVINCEKLQITDM-------STVKNLHIELTDSPFIHFIS------EGIECLTVCHCYISGVPE---------SVRYLEIKGSATDSIKNV-------NGLSSLSIN--SYNPENQARIDNLISPSLKTLSLTGCSNIILPEKLPESVTSVT................................................................................................................................................................................................................................................ 206
30 -11.300IDP91701 gene: SLIT3; slit homolog 3 protein precursor [Homo sapiens] NP_003053 [Homo sapiens]  ali follow..  18  61...............................................................................................................................................................RNAERLDLDRNNITRITK--MDF--AGLKNLRVLHLEDNQVSVIER--GAFQDLKQLERLRLNKNKLQVLPE--LLFQSTPKLTRLDLSENQIQGIPR--KAFRGITDVKNLQLDNNHISCIED--GAFRALRDLEILTLNNNNISRILV--TSFNHMPKIRTLRLHSLEQNSIKAIAGAFTQYKKLKRIDISKNQISDIAPDA--FQGLKSLTSLVLYGNKITEIAK--GLFDGLVSLQLLLLNANKINCLRV--NTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQN......................................................................................................................................................................................................................................... 437
31 -9.990CPX_91662_05666 Complex of CADH1_HUMAN with INLA_LISMO [Undefined organism]  ali follow..  15  990...................................................................................................................................................NNQLTDITPLKNLTKLVDILMNNNLANLTNLTGLFNNQNLTNLNRLELSSNTISDISALSGL----TSLQQLSFGN----QVTDLKPL-ANLTTLERLDISSNKVSDISVLAKL----TNLESLIATNNQISDITPLGIL----TNLDELSLNGNQLKDIGTLASL----TNLTDLDLANNQISNLAPLSGL----TKLTELKLGANQISNISPLAGL----TALTNLELNE-DISPISNLKNLTYLTLYFNNIDIS---VSSLTKLQRLFFYNNKVSDVS--SLANLTNINWLSAGHNQISDLTPLANLTRITQLDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKAIFNDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQ------------EPTAPTKEGYTFKGWYDAKT-----DKWDAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFK 1556
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.