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Query: IDP05418 conserved hypothetical protein [Bacillus anthracis str. Ames] BA_1561 [Bacillus anthracis str. Ames], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSINKWLFRFIGFLVMLVVITTLNSLNVFASVNDLAQPIASAKVIEVELNDDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGIDVVVESGKEKNITVKPKSAGTYELICRYHLLKGMEGKVIVKLast
1 -66.700IDP05418 conserved hypothetical protein [Bacillus anthracis str. Ames] BA_1561 [Bacillus anthracis str. Ames]  ali  100  1MSINKWLFRFIGFLVMLVVITTLNSLNVFASVNDLAQPIASAKVIEVELNDDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGIDVVVESGKEKNITVKPKSAGTYELICRYHLLKGMEGKVIVK 129
2 -21.900IDP91016 hypothetical protein y2451 [Yersinia pestis KIM 10] y2451 [Yersinia pestis KIM10+]  ali follow..  19  1MISSGSYYMSIWFFRRTALHAALLSL----PVFAISAQAADIQQVKITVNDKQCEPMALTVPAG-KTQFIVHNVSQKGLEWEILKVEERENIAPGFTQKMTANL-EPGEYDMTC............... 112
3 -20.200IDP05047 gene: ctaC; cytochrome c oxidase, subunit II [Bacillus anthracis str. Ames] BA_4154 [Bacillus anthracis str. Ames]  ali follow..  17  86HKLEIIWTVIPIILLLILAVPTVTYTFKLADVSAMEKKNIDKDTIVVDVTANLYTSQDLVIPTGKKVYLNLKGAD-IKHSFWVPSLAGKMDTNTDNVNKMWLKADKSGTYNGFCTEFCGPSMQFKVKA. 227
4 -18.500IDP02304 gene: qoxA; quinol oxidase, subunit II [Bacillus anthracis str. `Ames Ancestor`] GBAA0703 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  13  92....EIIWTLVPVIIVIALSIPTVKATYASEEVPKESKHIKPVEIYVTSANWKWTVNYLNIPAGVPIQFKLTSVG-PMNAFWVPELGGMKYTMDGMIMDLYLQADKPGSYLGRSANFSGEGMEFEVEA. 227
5 -17.300IDP05038 multicopper oxidase family protein [Bacillus anthracis str. Ames] BA_1902 [Bacillus anthracis str. Ames]  ali follow..  13  1MMRYILTAVTVSVIFLIAACSVTTNTTNDHKNRNDKKEIVKGPEVTLIAKNGSSPGPEIRVKKGEKVKVTLKNELSAPVSIHWHGYPVQDAVEPGKSFTYEFEANVLGTYWYHSVNQLDRGLYGTFVVE 172
6 -16.200IDP00435 gene: sufI; repressor protein for FtsI YPO0673 [Yersinia pestis CO92]  ali follow..  12  1MSLSRRQFIQAAGLALGAGSLPLRAQASSTQQPQLPVPSRRGQPLFLTLQNGMYLGPTVRVFNGDDVKLIYSNRLTEPSGLQVPMGGEARMIRPGEDWSPVLPVRQAANCWYHANTPNRMGLAGMWLVE 165
7 -14.000IDP05615 putative lipoprotein [Bacillus anthracis str. Ames] BA_5522 [Bacillus anthracis str. Ames]  ali follow..  15  1..MFKKV--FVPLFAATVLISGCNKEVVKESPKDKVEQHKKNTPLKI-------DEVKINTVNGKTLMVDVKKGEKLTYAYYIKGEEIVEKIWYKPENSLKYEVKEPGKYKVKAYAKDANKKI-EVTIE 125
8 -13.000IDP06529 gene: acm; collagen-binding MSCRAMM Acm (Fms8) [Enterococcus faecium DO] AFK59905 [Enterococcus faecium DO]  ali follow..  10  1..MKKCRNIILSMLFIITNITSLIPVHVYADAGRDISSNVTSLTVDIKV-KFSFDEKKQNIQPGDYLWINWPSE-----NIRGEGFQKEIPLMIENKNVGTLTVRKDSQVVFNENIKNLDSVEGWGQFE 132
9 -12.900IDP05159 gene: calY; camelysin [Bacillus anthracis str. Ames] BA_1290 [Bacillus anthracis str. Ames]  ali follow..  13  1MSLKKKLGMGVASAALGLSLIGGGTFAYFSDKEVSNNT---------------FAAGTLDLTLDPKTLVDIKD------------------LKPGDSVKKEFLLKNSGSLTI................. 79
10 -12.900IDP05612 putative lipoprotein [Bacillus anthracis str. Ames] BA_5233 [Bacillus anthracis str. Ames]  ali follow..  12  1..MLKTIKNTLLFFLCLVVLSGCFT---REGTIVGGKVHGGSNSIDGKYKSFT-ATQDMDVKKGESWTFTFKTKQGTIKAYVLDSNDNTILEVNSGNSKNNIKVSKDDTYKVKII---TEEHGGEFEIS 124
11 -12.400IDP05463 spore coat-associated protein [Bacillus anthracis str. Ames] BA_1288 [Bacillus anthracis str. Ames]  ali follow..  18  1MTLKKKLGMGIASAVLGAALVGGGTFAFFSDKEVSNN---------------TFATGTLDLALNPSTVVNVSN------------------LKPGDTVEKEFKLENKGTLDI................. 79
12 -11.200IDP05670 hypothetical protein lmo0617 [Listeria monocytogenes EGD-e] lmo0617 [Listeria monocytogenes EGD-e]  ali follow..  18  1MKKLKSILLLMGIITFALALTACGGTEDKASTEKIETAKAETKKKPNELGDYKVEILSSEVVKDFEIKTKFTNNSKENISFMVSMGGSEKDVQPGGTLEVTELYK........................ 134
13 -11.000IDP05125 putative lipoprotein [Bacillus anthracis str. Ames] BA_4310 [Bacillus anthracis str. Ames]  ali follow..  11  1..MKKLIMTLFIAMLALAGC---------NTNKEEPKKEQKLEAVKVAVQ----NPKEIKPGEKTEVQALVTQGKEKVTDADDVKFMLEGKHKGKGVYAVEKTFETDGVYHIIAHTNAREMPEVKVAV. 128
14 -10.700IDP05667 hypothetical protein lmo0462 [Listeria monocytogenes EGD-e] lmo0462 [Listeria monocytogenes EGD-e]  ali follow..  11  1..MNKLVLSTLSVAAMGMVIFSGGTAYAADKEGNTVVEYSVEGDYTLVV------PEKVNLEPGKEVEVTLSSGLSADGEIELERVG-------ATSDVITSSFKKAGAY------------QTTLTFT 157
15 -10.300IDP00500 putative copper resistance protein YPO1784 [Yersinia pestis CO92]  ali follow..  17  1MFIRKVRSSCRMLSALIVLFVGLSSQQALAHAHLKAETPAADTTIN--------APEALTLGFSEGIGVKVTGPDNNVVK--------DLKLDPANNTQLILPIGHAGKYHV-VDGHKTKGT--SFTVK 128
16 -9.990IDP05407 conserved domain protein [Bacillus anthracis str. Ames] BA_1485 [Bacillus anthracis str. Ames]  ali follow..  10  1..MKNLVIGLVALLFVVV--------GGFYIKKYQETTETVGDVQEVKW-----DVSNGKGNEKADIVFQLLNNKSSERAVIVDG-QTKPTFAGNGSYKVSSKIAKDEGYTIFLYEDKNKS........ 119
17 -9.550IDP05014 putative lipoprotein [Bacillus anthracis str. Ames] BA_1972 [Bacillus anthracis str. Ames]  ali follow..  16  1..MKKMIAICLLTTMSFSTLVGCD------IKGSNAVQESKIKKATYKDFTYDVNPETFTLTEKDRTSWEYPDQK-VKVNVEKKKDYLNIEVESTGAESFTWPKVQAENYTL---------WEGKQI.. 135
18 -9.540IDP05655 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo0159 [Listeria monocytogenes EGD-e]  ali follow..  13  1MSKNGNFLKKVGLAFLSILIVASTIFQTTVVKAATSYGSQFLNTVELLDKDYTWSPNSTNVKAGDTMDFTL------PSQLALATDLAFDVKDSKGQVVGTATVKKATTLVFSDYVEKHSDVKGELDFW 143
19 -9.210IDP06532 prophage superinfection immunity protein [Enterococcus faecium DO] AFK58444 [Enterococcus faecium DO]  ali follow..  17  20..YKKVWFWVLAVILIIIIGSALNGGSDSNKASDNGGEKVTKSS-TVKVGDAEYTLNSVELTDERNITYTVKNDGDSDIPVGTDNENTMGSVAPGKQMDVTAHFTLNQKGEIEIHFSPLVSFEKAAIFK 191
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Schwarzenbacher R, Godzik A, Jaroszewski L. The JCSG MR pipeline: optimized alignments, multiple models and parallel searches. Acta Crystallogr D Biol Crystallogr. 2008 Jan;64(Pt 1):133-40. Epub 2007 Dec 5.