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Query: IDP05429 hypothetical protein lmo0791 [Listeria monocytogenes EGD-e] lmo0791 [Listeria monocytogenes EGD-e], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKKGLFSMVLVLAMVLVLSACGASRVEPKKAGEITVNAVVYNKDTDKVKDVYGEDGSKFEKEFETSFKESFISTFTASFSSDVNLDKQVDEFYDALRKQVNEKTSYTTKVTNDDKESPEIQFAIKGLDMKGVQTELVEELTKAATADPSIASDDQKMAEKTMEIYTKAVQNADAVSEAKTVTLKLKADPDDDSLWKMENDMAFMQELTTAFFMGGMLast
1 -83.700IDP05429 hypothetical protein lmo0791 [Listeria monocytogenes EGD-e] lmo0791 [Listeria monocytogenes EGD-e]  ali  100  1MKKGLFSMVLVLAMVLVLSACGASRVEPKKAGEITVNAVVYNKDTDKVKDVYGEDGSKFEKEFETSFKESFISTFTASFSSDVNLDKQVDEFYDALRKQVNEKTSYTTKVTNDDKESPEIQFAIKGLDMKGVQTELVEELTKAATADPSIASDDQKMAEKTMEIYTKAVQNADAVSEAKTVTLKLKADPDDDSLWKMENDMAFMQELTTAFFMGGM 216
2 -21.000IDP05580 putative lipoprotein [Bacillus anthracis str. Ames] BA_0936 [Bacillus anthracis str. Ames]  ali follow..  22  1MLKKLGILVLGSAVALSLVACGDSTKEASNEKKEEPKQEAKKENKENKESKKKITAAD.............................................................................................................................................................. 58
3 -20.000IDP04197 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_2510 [Clostridium perfringens ATCC 13124]  ali follow..  11  1MKKLLVPVLVIIIFALLFVGCTNSSNSSSDSSVEIINS--SNSNNNNSSNNDTKKSDSNNASHKDNKDNNVSNNKNTNKKLDNKAEKLLKDIKEKAVKGEIIDYDFKLGDSIYD...................................................................................................... 116
4 -18.700IDP05486 putative lipoprotein [Bacillus anthracis str. Ames] BA_4573 [Bacillus anthracis str. Ames]  ali follow..  12  1MRAFFRGIGPFLIVVLLLVGCQSEENKIEQKATT------KAEEKVQITKEEEKSIQDVMDKFVRTTNEKNLAEHIELFSKKMPSAEDLKTQKEAAFQKGNKKIELHIDIKASKAGYVVVETKEK--------------------------------------------EIDGEITLQKKVQYAIG---KEEDGWKIEEVR............... 150
5 -18.600IDP05010 putative lipoprotein [Bacillus anthracis str. Ames] BA_4934 [Bacillus anthracis str. Ames]  ali follow..  13  1MKKVLMLFVLLLTASILLIGCSTKKEKAGMNLEKAQKVEIESLTDSSEKKVITDKKEIEKLFEVMKMDKWEMQSAPLDTPQGKTFKMYQEDTTKLSESSKDKKELHEIGTMTVYKDVPYVEVEMKNKKMSFKVPEDVAKDLLK......................................................................... 143
6 -17.900IDP05442 putative lipoprotein [Bacillus anthracis str. Ames] BA_0171 [Bacillus anthracis str. Ames]  ali follow..  21  1MSKKLLSLFSAVIVAAVITGCGQSDTTNKEQKENAAKENKTEKTDTTKENKPEEKNPKTRKLKIK....................................................................................................................................................... 66
7 -17.200IDP05267 hypothetical protein lmo0255 [Listeria monocytogenes EGD-e] lmo0255 [Listeria monocytogenes EGD-e]  ali follow..  16  1MKK-FLSILSILVLALLVTACGSDSSDAKKEEKMETVTYIADINGAKLEATFSHVGDNLRKVDQKMVYPLTALGLESGANLDDATKKQLEEQVASQYSAYKESKGASLETKFTDEAELTMSVDLYKADKDSVAS.................................................................................. 137
8 -16.500IDP05121 conserved hypothetical protein [Bacillus anthracis str. Ames] BA_0915 [Bacillus anthracis str. Ames]  ali follow..  12  1MLKKFTTCILGGALVFNLSGCGNTSDKTSSESK---ETNSKQEEKNVQTTDEAKTKENTKQKNTEQTKEKSKIKEKEYAVNKDFHTPKFDVTVKRVERDKVGKESIGFQKPEDGHVFIVVEAEGKNIT........................................................................................ 126
9 -16.300IDP02402 hypothetical protein FTT1778c [Francisella tularensis subsp. tularensis SCHU S4] FTT1778c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  14  1MKRKVLIATLLGASALSLSSCWLLVGAAVGGTAAYISGEYSMNMSGSVKDIYNATLKAVQSNDDFVITKKSITSVDAVVDGSIKVDST----------------SFYVKIEKLTDNASKVTIKFGTFGDQAMSATLMDQIQKNL........................................................................ 130
10 -15.600IDP05554 hypothetical protein CD3669 [Clostridium difficile 630] CD3669 [Peptoclostridium difficile 630]  ali follow..  8  1MKKKIMLVLSILSISIFAVGCTNAQNGSDSSKKETKSNTNVEQPKEENNTEKEVPNNKAKPTPKEETKAQSATIYSFDVDKTDLIENKVNTLFEELQKLKVVPESAKLNSFTTKDIDGVKTGIL--------------DVSSDFTKSNLGSDAETLMLDSVARTYIKNMN--------EQIKITVDGSNYESGHIVLEEGDYL............. 190
11 -15.600IDP05625 putative lipoprotein [Clostridium difficile 630] CD1348 [Peptoclostridium difficile 630]  ali follow..  11  1MNK-IAVSFLIIATTLLSTACMDYSISAVELVDSKESAVVKKDEDAKEETTSKMINSKKTTKIIEIISKDEKIVKYLQIDEESSLKDKLRLILDTLSNEYFNGLDMEVEVKEKDN--------LVKINLIEPDKKSRVSWKDDYLNEQNIIYTINNIIKNVIQE--IWIEEVEIYYNGKLIELR................................ 178
12 -15.500IDP05125 putative lipoprotein [Bacillus anthracis str. Ames] BA_4310 [Bacillus anthracis str. Ames]  ali follow..  17  1MKK---LIMTLFIAMLALAGCNTNKEEPKK-----------EQKLEAVKVAVQTNPKEIKPGEKTEVQALVTQGKEKVTDADDVK-KAGDEKHEMLEGKHKGKGVYAVEKTFETDGVYHIIAHTNAREMHVMPEVKVA-VGNAKVEDAKKENSDHGAGHGDHKSDTMIHLMAGDIKANAESTMKVHLKQKEE........................ 180
13 -15.400IDP02672 hypothetical protein FTT1602 [Francisella tularensis subsp. tularensis SCHU S4] FTT1602 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  13  1MKK-QLFAISITTALLVLSACGQTGP--------YLPDEDKLNSGSTLAKSGSSIMVKQNQQNNSTSTSDNQSDTSTKVDNDPTAPVRNNNPTTSELFEGENNFNYNNNIQNSQNAGGTPTL.............................................................................................. 114
14 -15.200IDP05658 hypothetical protein lmo0207 [Listeria monocytogenes EGD-e] lmo0207 [Listeria monocytogenes EGD-e]  ali follow..  11  1MKKKGTAVLFVMIMAVMLVACGDKEETKTYTLSQ------------------GVDSKLTYTYKGDKVTKQTAENTMSYASLGVASKEDAEKMLKATSDKFQGIDGLKEKIEYKDDKIETLEVDYTKISSEDMNKIPGMSSNGDTSKGISMEESAKMLESQGYKEVSK................................................. 153
15 -15.200IDP05588 putative lipoprotein [Bacillus anthracis str. Ames] BA_2883 [Bacillus anthracis str. Ames]  ali follow..  8  1MKVKIALLCLTFTCIFALAACKGTDEKKETNPT---SENSKNEQNTSSEGKKEPEVKSNTDSNSKDIVINQKSINHVKNLFELAKEGKVPNVPFAAHTGDIEEIEKAWGKADKNKGSQVFDVRSYHAELKSITLQEIEKALGKPNSVKGNGEDKIYVYK---------------VNKQFELKFIIPKSTGKVNHISVFSPEDSINKMAG....... 214
16 -15.200IDP02678 hypothetical protein FTT1653 [Francisella tularensis subsp. tularensis SCHU S4] FTT1653 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  9  1MKKLLLRMLITILVTIIVAGCASINDSNTRYENGYYIAELNYNFNDVYQATI------------NSISSGITYDENGHVYNLLENSEINNKATITAVNNEDPKDRLEIIIFKISKNNTKIMIKYADHGDSIRSSALLDTINESL........................................................................ 135
17 -15.000IDP05483 putative lipoprotein [Bacillus anthracis str. Ames] BA_3005 [Bacillus anthracis str. Ames]  ali follow..  12  1MRR-MLLIIISAIAAFALAACTGNSKNFISKAEEIVSLLNEAKYKEVHEKFDSKMTAALSEEKMKDLTPII---------------EKAGTFEKIEKQSIEEKDGLYTVILVAKYSKEQRTFIIT........................................................................................... 115
18 -14.900IDP05507 putative lipoprotein [Bacillus anthracis str. Ames] BA_5374 [Bacillus anthracis str. Ames]  ali follow..  11  1MRKLGLITALFALLFSSFTGCDNSPLDKKV-----------------------------------KEEAKRTEKEKGPKLTKMSTESFNQSISQGAKKRALAMDGIIKSAAVNSNLDLYIAVIPEHHELKPLRKKLQKQLSDEHPTFDVRVSTDKKIFMLL-EKLERKIKEKEVSKDEINKQLK................................ 151
19 -14.700IDP06193 gene: lpp20; lipoprotein [Helicobacter pylori J99] NP_224067 [Helicobacter pylori J99]  ali follow..  10  1MKNVKKILGMSVVAAMVIVGCSHAPKSGISKSNKAYKEATKGITNNDVDYSTNQATAKARANLAANLKSTLQKDLENEKTRTVDGKRSISGTDTEKISQLVDKEASKMLARYVGKDRVFVLVGLDKQIVDKVREELGM.............................................................................. 172
20 -14.700IDP02585 lipoprotein [Francisella tularensis subsp. tularensis SCHU S4] FTT1416c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  7  1MKKAKIYIIFLAAVLAVISGCATDKGTQ---------------KDGYYITTLNYNFNTVYNATLQAIQNGQTFDYKSNPYDISVNKNNGTDAEIVSASDSDSTDSLQVAMKKLPNNATRISIKYGSQGNSIRSSALIGIIEGNIRYANT................................................................... 137
21 -14.700IDP05592 putative lipoprotein [Bacillus anthracis str. Ames] BA_3194 [Bacillus anthracis str. Ames]  ali follow..  10  1MKI-LKFGIIGALSITLLIGCTSNSNETKA-----------SNKEASTAVKEKEIVYENVMFEQKEVRKLEISPVNSKSSNQVVNTENIKTIFTSMESA--EKKTLLLDQEAKNYIHSKMKVTYQDNSIQEFFDSDIVIAKASDETHGEGYDLREDNSKKIIQFFEKEF............................................... 160
22 -14.600IDP05677 hypothetical protein lmo1068 [Listeria monocytogenes EGD-e] lmo1068 [Listeria monocytogenes EGD-e]  ali follow..  12  1MKK-WMVIISIISLVALLGACGNNDNEKDQEDKSTTDSTTKKAKSSSNESNKAAETKENDTNDKAATTDKGSSNPTKEEKDTSTTTDTPKKETPKSPAKTEAFSFYLSSSKSFQKDFEALTLFINQYKVEHV.................................................................................... 152
23 -14.300IDP05607 putative lipoprotein [Bacillus anthracis str. Ames] BA_4862 [Bacillus anthracis str. Ames]  ali follow..  9  1MDRKFSMFMFLGVVLIILAACTTKSVEQVAVKEVPKEGYIILRNETVFDKTFETKIELQNYIEQQMNQDYPSDIVLIFKDKDAYDQLKTGDKIKVWSSQTFESYPVKMIVEKFE...................................................................................................... 119
24 -14.100IDP05670 hypothetical protein lmo0617 [Listeria monocytogenes EGD-e] lmo0617 [Listeria monocytogenes EGD-e]  ali follow..  23  1MKKSILLLMGIITFALALTACGGTEDKASTEKIE...................................................................................................................................................................................... 36
25 -13.900IDP04565 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_1805 [Clostridium perfringens ATCC 13124]  ali follow..  22  1MIKKIVVAVGLAFSLSFLVGCGNKSL---EQGKAAIKQGNYEEATAIFKAASEEDSKDKEE........................................................................................................................................................... 59
26 -13.900IDP92720 hypothetical lipoprotein [Francisella tularensis subsp. tularensis SCHU S4] FTT0289c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  10  1MKK-IKLLAAYTLATLTLVSCSNNASLSNDLNSAGDSIVRFVN-GTFYAEIYNTSLQSVYNATLLALNNSNIYSVKNNTINSKDAEITGTYATDKNFFNKSGQDDFAIRLVKGNQDTINLFIKIGKLGDKQASVDLLAKIQTNL........................................................................ 142
27 -13.800IDP04063 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_0514 [Clostridium perfringens ATCC 13124]  ali follow..  9  1MNKRVASILTTSLLVTSLVGCVGSNNKANTSSND----------SKVQESVENQSDFNDLRTYVGKTYNEVSENKGTGNENIEEVAGKKVIVSSSYSTRMFNYNANLILELDDSKNISAVSVHFKGIEPENILENIKKVLGEPKISKDKENGDSKV............................................................ 148
28 -13.800IDP05148 putative lipoprotein [Bacillus anthracis str. Ames] BA_0177 [Bacillus anthracis str. Ames]  ali follow..  9  1MKK-IIFVSSLVLAISLGVGCSNEKTAKTD-----------EPKKESVQKEKELTAKDVFKKTNEAFKNEEHVTMTYGVGVKAEGTEMDIVKAKMQLEPKTKNSRSEM---NISGTDVVVYTVDGKVAGEVKKPNTGEVITVPEEQLNAGGMKATQDIIDKLEVPEVVLDKMKLEKSGDKYKLKFTLKGQE......................... 176
29 -13.700IDP05460 putative lipoprotein [Bacillus anthracis str. Ames] BA_0985 [Bacillus anthracis str. Ames]  ali follow..  11  1MKK-IISICALTALSFTLIGCASTSATDKSPQAKQEHKQNAFQLNSANITDIEILQTTNNTTSKSQTDN--------------------KEMIQSIVSAVQKGTPKTITLDQKKRKSAHSTITVTYKDDAK-----NKEQITIAKDKKKDKVEGVTVNIKNTKMMKDFFK.............................................. 152
30 -13.700IDP06159 hypothetical protein jhp0866 [Helicobacter pylori J99] NP_223584 [Helicobacter pylori J99]  ali follow..  9  1MNKKHRLLGLIVGVLFFFSACQH---RLHMGYYSEVTGDYLFNYNSTIVVAYDRSDAMTSYYINVIVYELQKLGFYNVFTQAEFPLDKAKNVIYVRIVRNISAVPFYNGFSEQILMSANSHFILDWYDVVL-----QKRVLYVDGSVSGRTCGYQMLYRDLIKSTIKRIDFNRPERYYYNLRL................................. 210
31 -13.600IDP05451 putative lipoprotein [Bacillus anthracis str. Ames] BA_0580 [Bacillus anthracis str. Ames]  ali follow..  10  1MKK----IGTMLLFSILIAGCTQAQPDLKK----------PKKEAIATSSTQVNAPSFFHLSVLKDVNWEETPSFIQEKIPLKGIEEKIAMADSPIIANEKNEIMWYFLDPEMPTGKLSII--------------------------ALKQGSVTPTPLLFQQESSEPTWTTSNTIDSTTNELPLTMSLPSSGLWVLN-NEKYYDQFV........ 170
32 -13.600IDP05485 putative lipoprotein [Bacillus anthracis str. Ames] BA_3234 [Bacillus anthracis str. Ames]  ali follow..  8  3MKGRNVSVVFIAIVIFIIAGCSNMIGNEDQTIK--------------VQKHVDDTYEDLKVVTDNKQVQQVKKILNDAHFENKKVQMSRPADYHFVFQFKNPKIEAKATLYQIIPNKDKIEIIAGNSQYVQLEGKNAATLFQIITGEKLVE................................................................. 141
33 -13.600IDP04392 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_1500 [Clostridium perfringens ATCC 13124]  ali follow..  15  1MRV-LKGVILAIIPAFLFMGCGEFSKNDVAKVS....................................................................................................................................................................................... 32
34 -13.500IDP05763 hypothetical protein lmo2331 [Listeria monocytogenes EGD-e] lmo2331 [Listeria monocytogenes EGD-e]  ali follow..  12  1MKKGIALLAFMLAFSIFLTGCGGTDNTRKE--------------NHSDGSAEVKNKKDNNTSDEYVEDGLLLKVGEWTKDKDYDTKVTLEKIATPKIKVGLGDLNMLIKDVKITDPYYTIQVKYDLENTGKIITDQKQQIDVMTDNIGINGVFTVQPDVIVEDEYVICILKKDNVDKINKVTIKTSPVYNSETYDEITKSMTINIEF......... 225
35 -13.400IDP91374 outermembrane lipoprotein [Vibrio vulnificus CMCP6] VV1_1919 [Vibrio vulnificus CMCP6]  ali follow..  16  1MKN----IGLLLLASLFLAGCTTPTHLPLSGSQAIEIRIDDQFNPKHCQYLGTVTGNE.............................................................................................................................................................. 54
36 -13.300IDP05009 putative lipoprotein [Bacillus anthracis str. Ames] BA_4237 [Bacillus anthracis str. Ames]  ali follow..  15  1MKA-WKSIFVLCSFLLMLSGCFHQEEKKVEPKKKESIPETKEYGGRELKKVGQKVKET.............................................................................................................................................................. 57
37 -13.100IDP06182 hypothetical protein jhp1453 [Helicobacter pylori J99] NP_224171 [Helicobacter pylori J99]  ali follow..  11  1MR-----VLLFFILLLWFKGCGATYAQNALGDSVYVKLI----------------VNLPNPENSVEFKDLMNRLVVQRFQNRLASEKDADSIIIIEITNVTDTSITQNKEGFTTFYRATVSVNYTYDNKRGTQKTFQNSGYYNYAVNLQDPLNTFQNRYYAINQAVEQTLT............................................. 154
38 -12.600IDP05448 hypothetical protein lmo2594 [Listeria monocytogenes EGD-e] lmo2594 [Listeria monocytogenes EGD-e]  ali follow..  28  1MKK--TSIIFIFCTLLFVTACSTSENQTQA.......................................................................................................................................................................................... 28
39 -12.500IDP05694 hypothetical protein lmo2007 [Listeria monocytogenes EGD-e] lmo2007 [Listeria monocytogenes EGD-e]  ali follow..  12  1MKKKWGVIIASLCLLLGLSACGSDEKADANEVPT-LKWYMIGTPQKDTEEVMKEVNKYTEEKI---------------------------------------GVKVEMTQIDWGDYGKRMQTVINSGENFDIAYSAAGEFVSYSQKGAFLPLNK--YLDKEGKKMKAELNDVLWEGATIDGNI................................. 141
40 -12.200IDP05695 hypothetical protein lmo2080 [Listeria monocytogenes EGD-e] lmo2080 [Listeria monocytogenes EGD-e]  ali follow..  13  5FKK---VILPVLLVVLFLAGCNQAEVPALV-LDGTITDTSLLENNNELTVNGTLTWNGEKNDYASEVMITVSSNTAVTNATTGKAMKLADIKEEDTVRAVFPQGSNITSPAPGKVSENATSLKVTP.......................................................................................... 126
41 -12.200IDP05266 hypothetical protein lmo0047 [Listeria monocytogenes EGD-e] lmo0047 [Listeria monocytogenes EGD-e]  ali follow..  12  1MYKKLATVGMTVLLVGALSACSFNDDKDTSSNNS------NNETTSSKSSNNESSSDSLQNKSLDMSYEDAINAFKDKHSDAEISSVELEKS---------GKYVYKV-DGISNDNEYEMKFNAETKEQLSDETDRLDREDAGGVEKENEKLSLDGIKS-----PKEAMDKAVSEQAGDVTSWKIER-ELDTTYYEVTKQDNNKYEIKLNAKTLEI 196
42 -12.100IDP05430 hypothetical protein lmo1265 [Listeria monocytogenes EGD-e] lmo1265 [Listeria monocytogenes EGD-e]  ali follow..  12  1MKNRIT-MIAGIVCLSILTACSSSESVKGTT---------------------SEEQTTSQSGAEMIKANNGVVSYHGKYLKLAENMDNLEKDAPIIIKATKKSEKTTVTKETKENVFPTDFYTMSDVQINSIEKDTTGKLSEKVLEYSVENVLVEG------EEYDLTIDGYKNMEKGEEYTLFLEKNPDGDSKFPVEELSE.............. 187
43 -12.100IDP05508 putative lipoprotein [Bacillus anthracis str. Ames] BA_5398 [Bacillus anthracis str. Ames]  ali follow..  11  1MTIRKR-TSFIWIFLFSLVACSPPNTTIDKKNDVVVKGTGISNLDKFEQFVLNVEQVKVDKIRIVHYTHEGDPIFQTLERSKNDILYASDNRKDQFDGDNKGLYKDSCKSIVKDERESGTTYRLIDCT........................................................................................ 127
44 -12.000IDP92719 hypothetical lipoprotein [Francisella tularensis subsp. tularensis SCHU S4] FTT0991 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  7  1MVRYIHTIFLFILSVVLLASCGGVLSDGNAGNFDSLVGTKVYIKADNFANFANALKRNLTNYNAIVVNDEKSADYIINIQDVKQESQLTSIVGGASNNTFQLIYTVTYNVVKPDDKTPVIPNR-------NAQQFWQSNSGTQLAQNNEANRIYSYLEGQLVNNMATQIAALLPSKNTTQASTSSDNSLQ.......................... 191
45 -12.000IDP04088 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_2931 [Clostridium perfringens ATCC 13124]  ali follow..  13  1MKK---GMILLILSSFLLVGCDSIKMDKLAA----------NNNERVKTIANDLIGDIDLSLYFDGTKDEQNPKIEQQEILVDGDEILGQYLIQALIQGPSQKGSLKLLSFDIKDDIAIINLSKEAIVNMSATKETLEGIIATITQIPSINKINILVDNQMVDSLGGNFDISKPFGKEDIPNLKI............................... 182
46 -11.800IDP05089 putative prophage LambdaBa02, lipoprotein [Bacillus phage lambda Ba03] BA_4065 [Bacillus anthracis str. Ames]  ali follow..  8  1MFKKILILIFTALCTLTLSACSSDSSSASKEVRSFVTNFNGILDENGSSTNTEKLSKDLKVVKEKGYQDKTLHVVSLIENQNIKDDGTVELGNMKNFRVILDDKQKVIQKITYVGDVFLFSLESLKIDATKEVKDMLEDIRIKINRKDPKVESVAYTSSYKISF------TYDPNSPTALLNFSFEKNN........................... 198
47 -11.700IDP90329 hypothetical protein [Chlamydia trachomatis D/UW-3/CX] CT_548 [Chlamydia trachomatis D/UW-3/CX]  ali follow..  10  1MLK-MFWLNSLVFFSLLLSACGYVEKKFSLSEGIYVCPIEGDSLGDLVSSLSYEKRGLHTRSQGTSSGYVLKVSLFNETDENIGFAYTPQKPDEKPVKHFIVSNEGRL--------ALSAKVQLIKNRTQEILVEKCLRKSVTFDFQPDLGTANAHQLALGQFEMHNEAIKSASRILYSQLAETIVQQ---YDLF..................... 194
48 -11.700IDP04518 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_2883 [Clostridium perfringens ATCC 13124]  ali follow..  10  1MVKKIMASLIIGSL-FLFMGCNRISNAAISIAEEYMEALKSNDLEKIKRLS----------------------------------DKEVDKNIIISPSKDLEITGIKQVGSAQLGNKTMFKFYVTRTKEGEPKADLE--------------------------------------------QYYLEVRKTEEGEYKVSELKSTEL........... 146
49 -11.600IDP05445 hypothetical protein lmo0821 [Listeria monocytogenes EGD-e] lmo0821 [Listeria monocytogenes EGD-e]  ali follow..  16  1MKK--IIFTVVLSLVLVLAGC----------ADVTNTVKVDKKGEATISFDIDISSV----------------AGIFASSYSDEVEAKLKEAGFTVDKKSNTSYHIEKKVDKNETTKSDMKPEDFGVKITNSKSFFTQKIKVDADIDIEKIWKKEVADVPFPKEILSQVD---------TFILDLKSVDGGKLTWDVPLDKK.............. 176
50 -11.500IDP05313 putative lipoprotein [Bacillus anthracis str. Ames] BA_1061 [Bacillus anthracis str. Ames]  ali follow..  10  1MRK---LLTVIGITFLILAGCSNGDFE--KEIDAGKTALTNKEYKNALSSFERALDEKKDDSGAIVLVEQTKIMMEAVKLKEEKKIEESIQSFEKVENKQAKKERTALLAILEQKKKYSEQLTKSEELINKKNYAEAKETLNKLVLETKDNKNLEEYNKKAVGLVTKIGEEEKTAKSKATAK.................................. 186
51 -11.500IDP05242 hypothetical protein lmo2079 [Listeria monocytogenes EGD-e] lmo2079 [Listeria monocytogenes EGD-e]  ali follow..  13  1MKK-GILLSILLALVLVISACGESAEEPQGKFVQTMKNGMNVPDQYTYTTSFAVNDINVSSTDPSAQTMGILKDIKLSVTTSTDKKANKSEAKFNV-TSTNNLLPISMDDFLVDSKTGNAYIPLKYLSTEELTSSLTDQPEAKTAVNTKEIEAAKDLNKKAIKLIDTYFTGLEKDRFKEADDVSVTIKNAD......................... 232
52 -11.500IDP05515 putative lipoprotein [Clostridium difficile 630] CD1687 [Peptoclostridium difficile 630]  ali follow..  9  5VKKSISLMIILTIFIFMLTACEKDEQPDSVDIQTEDKNEIKIDEGNAKVLNIGKSEIINIDEGDKV---DTSTKVENNSTFNISNVELIYNEYDENKKIISSDSKALLDMTLMPGKVAYIEVEVYAYEYEAEGKIVYVNLKENTINIRNNNIKLENSSQYEVLSTSE-LKKVNESNEGITYQVKVKNSSSKD........................ 201
53 -11.300IDP93848 lipoprotein [Yersinia enterocolitica subsp. enterocolitica 8081] YP_001005557 [Yersinia enterocolitica subsp. enterocolitica 8081]  ali follow..  9  1MMKKIF-LATTLITTVLLSGCATESSRSLEVAKVTSYGTQYNGPRSPISVGKFDNRSSYMSGIFSDGVDRLGNQSKTILVTHLQQTGRFNVLERTNMEELKNEAAISGKSQQLKGQVAYAKVNLNIVNVNQGAGEYELSNREVIGFGGTASYDSTLNGKVLDLAIREAVNNL............................................ 210
54 -11.100IDP05025 hypothetical protein BAS4742 [Bacillus anthracis str. Sterne] BAS4742 [Bacillus anthracis str. Sterne]  ali follow..  8  1MKKKFITGMISAALLLSFTLPSIADASIETEDDGIVT-----EYIPEINLGIDLSKVDTSDFDFENFGKEYDFLVNDPVFLQLEEEVSKLRVESVVEKN-------PFTGELVVKQEILPAI------VLGALRVLVSKVGRTAADKA-------AVARPYVQKALNSPKQYILEAAKGGMIIQVRSKATGNRVFAID.................. 174
55 -10.900IDP91154 hypothetical protein SAOUHSC_00808 [Staphylococcus aureus subsp. aureus NCTC 8325] SAOUHSC_00808 [Staphylococcus aureus subsp. aureus NCTC 8325]  ali follow..  25  1MKK---VMGILLASTLILGACGHHQDSAKKESTSHKKKENDNEELNEELKEFKSKKNM.............................................................................................................................................................. 55
56 -10.900IDP05272 hypothetical protein lmo1649 [Listeria monocytogenes EGD-e] lmo1649 [Listeria monocytogenes EGD-e]  ali follow..  17  1MKKWLL-VVLTLALGLSLAACSGSNSSDKKEDTKKETTSDKDKVLNYYMDLVDV----------NENNGDYNAYVGAVGADPKPSEADLAALAKPASESALKVSE-SEKTPDLGKSTDDFKAAVKQL------SDAYKLEADALKASGRDTTKADEAMAKADEAIASVLKDAGLNPSSITTDTA................................ 170
57 -10.900IDP05612 putative lipoprotein [Bacillus anthracis str. Ames] BA_5233 [Bacillus anthracis str. Ames]  ali follow..  16  1MLKTIKNTLLFFLCLVVLSGCFTREGTIVGGKVHGGS----NSIDGKYKSFTGFATQDMDVKKGESWTFTFEDKTKQGTIKAYVLDSNVNSGNSKNNIKVSKDDTYKVKIITEEGGEFEISWKKE........................................................................................... 128
58 -10.900IDP05390 putative lipoprotein [Bacillus anthracis str. Ames] BA_2766 [Bacillus anthracis str. Ames]  ali follow..  13  1MKSIMKVTCTALLFTGLMAGCNGNTAPKQEKSAIEKNAMHYGEIVKNEYYRATVENAKFEKIDKERR-----------------------------------TTRVMINNVRDDGQ----TIDLSEIKYFIQDEKTGQKYEGEAHPIYDEHYKNVPHEFSLTTDVVFELKTSPKDLNNMYLYIDSKAAPLTDTYWKLDH................. 161
59 -10.800IDP06507 extracellular solute-binding protein, family 1 [Enterococcus faecium DO] EAN11122 [Enterococcus faecium DO]  ali follow..  16  1MKKNIVMMGVALVSGLVLAGCGNGSASNSDKVELSINYYNGAISKKAMDNAKKEFSDYKLSFKQIPANDDFDTKLKASLNSKSAPDVNLLDYDSETLAADFVEWKWDSCFTNDKKTQIAMPIDIGPTAL----------YNVDAFAKAGLPTNDQEISKAL-ESLMAAAKQMKEKA........................................ 189
60 -10.800IDP05480 putative lipoprotein [Bacillus anthracis str. Ames] BA_3532 [Bacillus anthracis str. Ames]  ali follow..  30  1MKKKL-TILFSIVCILVLAACGQTKANKEETKKV...................................................................................................................................................................................... 33
61 -10.800IDP05579 amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Ames] BA_0855 [Bacillus anthracis str. Ames]  ali follow..  10  1MKKLFSVLAVTTLAIGIVAGCGKEEKKDTASQDALQKIKQSGELVIGTEGTYP---------------------------TFHDSSNKLTGFDVELAEEVAKRLGVKPVFKETQWDSLLAGLDAKRFDMVANEVGIREDRQKKYDFSKPYVSSSAALVIAKDKDKPATFADVKGLKGAQSLTSNYADIAKKNGA-GVEGFSQAAELLASGRVDFTI 193
62 -10.800IDP90095 ZZZ_0011 [Escherichia coli 042]  ali follow..  6  1LMTIKCLLLAVMVCPFFITACSDKYSEQDRVQAINNADAPFGAGLLTFQISSDTQLNSLNEISNSCALLFLQASDKNTLQDIMNNPVLIKQFFIGKVDGILKVDKYVAMPGQEITLHIDRNEGTKYVGVVAGYYPFPGKQHMLLLDIPVDVVEEGWWNKSLHASLLPLSKKISMGKESISMK.................................. 184
63 -10.800IDP05472 putative lipoprotein [Bacillus anthracis str. Ames] BA_2584 [Bacillus anthracis str. Ames]  ali follow..  10  1MKSGKKLIVFLFSIAV-LCACEPEMEESKSEDSIVMDIATAAVKEESFSENANEIKKEINKRLQIQGIMSYKVNISQRNKEIVNAEHRWELVFGQIFDDVFRKNGYEGFGIQQINYKKNQPVTID-------------------TKIRDDEVGAREFGQKIEKEVEDVLKTEAVKKWIENDSYAIGIYDIENRK...................... 195
64 -10.700IDP02726 maltosaccharide ABC transporter, maltosaccharide-binding protein, putative [Bacillus anthracis str. `Ames Ancestor`] GBAA4229 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  14  1MKKALSLLTVSALSIGMLSACGPKDSGKKEESKAKKDYDLL-------------------------------------------EDDKKGVGLEPAVKSFEEKYKVKVKVVEMQMTDQVKKLRLTGPDVVTLPHDQIGNAVTELSEVKADDAVKSKFTDSSIETYNGKLYGLPKAIETPVFIYNKKLMPKAPETM..................... 163
65 -10.600IDP05503 putative lipoprotein [Bacillus anthracis str. Ames] BA_4863 [Bacillus anthracis str. Ames]  ali follow..  13  1MKR----ALFFFISIFFLGSCSIWYESKSWTGQYKGHIKDDSEDGMFTFRYKGGDGNTEFKNLEIAINGAFSTMTQTSENHKGAKIEMKSSCVSCAPLSKDEPIEIVIKWDDKYEEKMVLKRK............................................................................................. 124
66 -10.600IDP91126 extracellular solute-binding protein, putative [Staphylococcus aureus subsp. aureus NCTC 8325] SAOUHSC_00176 [Staphylococcus aureus subsp. aureus NCTC 8325]  ali follow..  14  1MSKILKCITLAVVMLLIVTACGPNRSKEDIDKALNKDNSKDKPNQLTM-----------------------------------VDGDKQMAFYKKITDQYTKKTGIKVKLVNIGQNDQLENISLKGPDIFFLAHDNTGSAYLQAAEIKLSKDELKGFNKQALKNYDNKQLALPAIVETTALFYNKKLVKNAPQTLE.................... 171
67 -10.600IDP02622 ABC transporter, periplasmic substrate-binding protein [Coxiella burnetii RSA 493] CBU_0109 [Coxiella burnetii RSA 493]  ali follow..  10  1MLKKLMRLLISGVMLVGLTACHQKEAKNEVRVTQLMEVAKQVALNRYGLHVNIITFSDYNTPNEALADGSVDANMFQHLPYLKAQIEMRGYKIVSIGKTFVYPMGLKITALTQLKTGAKIAVPSDPSNEARALLLLEKAQLIQLKTHVTINATPMDIASNPKKLKIVELDAAQLSRSLGDVDLAA............................... 195
68 -10.500IDP05268 hypothetical protein lmo0366 [Listeria monocytogenes EGD-e] lmo0366 [Listeria monocytogenes EGD-e]  ali follow..  11  1MKK-LIIVMLTIFTAVLVVGCSGTGTADKAETKK----------ETTKESKQANAVKKEVKEMKSNLDDVKKAISDKDKSALQSSAAELHKHWLEFENNVRDLYPLQYTDVEKYETPIFYESKNDNPNFDTLLDGALDTLEKAKETKAKTSEVLDKAVDNYSKYVTEQVDEFVAQTEIFTNAVKSGDIEKAKAAY..................... 190
69 -10.500IDP05647 hypothetical protein CD3457 [Clostridium difficile 630] CD3457 [Peptoclostridium difficile 630]  ali follow..  7  11FNIKGIIYGVIALVFVIGGFIFIPSMFVEKSKPIDYTVLQRNSIPEKILDVMDKYTNEERALAAKIDNKIYNNKYGIEMDKIESVVEEGKDVLRVKIKYKDKEDSFPYIVVETNMSELPDRIELN........................................................................................... 141
70 -10.500IDP05662 putaive secreted, lysin rich protein [Listeria monocytogenes EGD-e] lmo0303 [Listeria monocytogenes EGD-e]  ali follow..  10  1MSKKLVSIIFLGICLL-LVGCGKEETDAAGKVSLDLDIDAEGNVKELYIDDAVAITNSYKLKKKGDDEYQYDGTLISKKVYSYETESD-KENVETMLKFLKSKDNVKITKNEQKGDEYHIDVKADEKDFVFSLEMQSGKLIFKKVDTKEKVLIKETYKK......................................................... 183
71 -10.400IDP05586 putative lipoprotein [Bacillus anthracis str. Ames] BA_2746 [Bacillus anthracis str. Ames]  ali follow..  10  1MKI----LIYILMVCFLITGCSIGKKDSPNE------------------------------------KSEQKNVSMKNVNYTNKSNKPNEKAADHLASLAASVPGVNDATAVVVGKYAIVGIDVKAKLDRTRVESIKYSVAESLKNDPDGANAVVVADVDTYERLKQIGKQIKKGKTGEGILDELAAIVGR......................... 151
72 -10.400IDP92716 sugar ABC transporter substrate-binding protein [Streptococcus pneumoniae D39] YP_817037 [Streptococcus pneumoniae D39]  ali follow..  12  1MRKGTMLSVVAGLSLAILAGCSGGTNSKQASSSNDIK-------------------------------------VWVQFSDETNEGKAWQKVVDNFNQSGKSKYKVVTEYIPRSGSEDKVNAAITTNSLPDVITLDGPNTAAYAKSKVITPLDDYLKDNNMDDVLDSIKQQGTYNGK-KEAGIAESELPTLEKPWTWDEFNTIAKKL......... 193
73 -10.300IDP91953 extracellular solute-binding lipoprotein [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100002215 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  12  1MKRKLACTVLASAAVLGLAACGNSGGSKDAGKSG------------------------------GDGAKTEITWWAFPVFTQEKTGDGVGTYEKSIIEAFEKAVKVKLETIDFKSGPEKITTAIEAGTAPDVLFDAPGRIIQYGKNGKLAELNDLFTDDFVKDVNNENIVQASKAGDKKKMLEDAGVANLVKEGWTTDDFEKVLKALKDK...... 200
74 -10.300IDP05001 putative lipoprotein [Bacillus anthracis str. Ames] BA_1090 [Bacillus anthracis str. Ames]  ali follow..  20  1MKR-VMYVVLLLSFVIGMTACNDETSSSRTLLS------IGKPAKDNVIYFTHTDNKRKIQEIQDMFQN................................................................................................................................................... 62
75 -10.300IDP05476 putative lipoprotein [Bacillus anthracis str. Ames] BA_2745 [Bacillus anthracis str. Ames]  ali follow..  18  1MKKSTL-ILCSLCLGFSMTACEQKKQKKESININHFSNINEGMTYKEVKDLIGFEGDLLIEEGVE....................................................................................................................................................... 79
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. Discovering new genes with advanced homology detection. Trends Biotechnol. 2002 Aug;20(8):315-6.