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Query: IDP05449 hypothetical protein lmo2595 [Listeria monocytogenes EGD-e] lmo2595 [Listeria monocytogenes EGD-e], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKKRGLLLVSVLMLFIFLTVACGSSEDNEESGEISTKEIELTVDDPIIPTDENGEATIEGTVDPKSKLTIDGKAVKKDDSGRFTYTYSLTNDNVAEVDVKLLAVRKNYKDEKYTITITNNSKAYNDNMVKQEAIQKEEAEKAEKERKEAEEKAKQEEEAAAAKAATTDENTPSDDTVYGTLASKDTLTKEGDAFYKDEALDVLYSTVENDEIFQVLIQLGDESTIRKDLDKNHLTELARDYMESDATLIQTVSDESFVYESPSINKTYTVDYMLNDEGYVIAVYVTQAKLast
1 -124.000IDP05449 hypothetical protein lmo2595 [Listeria monocytogenes EGD-e] lmo2595 [Listeria monocytogenes EGD-e]  ali  100  1MKKRGLLLVSVLMLFIFLTVACGSSEDNEESGEISTKEIELTVDDPIIPTDENGEATIEGTVDPKSKLTIDGKAVKKDDSGRFTYTYSLTNDNVAEVDVKLLAVRKNYKDEKYTITITNNSKAYNDNMVKQEAIQKEEAEKAEKERKEAEEKAKQEEEAAAAKAATTDENTPSDDTVYGTLASKDTLTKEGDAFYKDEALDVLYSTVENDEIFQVLIQLGDESTIRKDLDKNHLTELARDYMESDATLIQTVSDESFVYESPSINKTYTVDYMLNDEGYVIAVYVTQAK 289
2 -17.800IDP05670 hypothetical protein lmo0617 [Listeria monocytogenes EGD-e] lmo0617 [Listeria monocytogenes EGD-e]  ali follow..  24  1MKKKSILLLMGIITFALALTACGGTEDKASTEKIETAKAETKKKSNPNELGD-------------YKVEILSSEVVKDFEGNIAIKTKFTNNSKENISF.............................................................................................................................................................................................. 89
3 -16.300IDP05580 putative lipoprotein [Bacillus anthracis str. Ames] BA_0936 [Bacillus anthracis str. Ames]  ali follow..  17  1MLKK-LGILVLGSAVALSLVACGDSTKEASNEKKEEPKQEAKKENKENKESKK............................................................................................................................................................................................................................................ 52
4 -16.200IDP04197 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_2510 [Clostridium perfringens ATCC 13124]  ali follow..  13  1MKKL-LVPVLVIIIFALLFVGCTNSSNSSSDSSVEIINSNQQNSNSNNNNSSNNDTKKSDSNNASHK--------------------------------------------------------DNKDNNVSNNKNTNKKLDNKAEKLLKDIKEKAVKGEIIDYDFKLGDSIYDVIDKLGKPSSENYVAEAKGNYFNFDSYNLSFGCNKGDQIFEIRS-------LNKDLKSLDLNNVENFFGKPDYTVTTKSKEKIIGYKITK---DFKILFVFNTSYKLDHYSVLYPS 223
5 -16.100IDP05125 putative lipoprotein [Bacillus anthracis str. Ames] BA_4310 [Bacillus anthracis str. Ames]  ali follow..  12  1MKK----LIMTLFIAMLALAGCNTNKEEPKKEQKLEAKVAVQTNPKEIKPGE--KTEVQALVTQGKEKVTDADDVKHKGKGVYAVEKTFETDGVYHIIAHTNAREMHVMPEVKVAVGNAKVEDAKKENSDHGAGHGDHKSDTMIHLMAGDIKANAESTMKVHLK............................................................................................................................. 176
6 -15.100IDP05763 hypothetical protein lmo2331 [Listeria monocytogenes EGD-e] lmo2331 [Listeria monocytogenes EGD-e]  ali follow..  16  1MKKGIALLAGFMLAFSIFLTGCGGTDNTRKENHSDGSAEVKNKKDNNTSDEYVED.......................................................................................................................................................................................................................................... 55
7 -14.900IDP05442 putative lipoprotein [Bacillus anthracis str. Ames] BA_0171 [Bacillus anthracis str. Ames]  ali follow..  19  1MSKKLLSLFSAVIVAAFVITGCGQSDTTNKEQKENAAKENKTEKTDTTKENK............................................................................................................................................................................................................................................. 52
8 -14.100IDP05009 putative lipoprotein [Bacillus anthracis str. Ames] BA_4237 [Bacillus anthracis str. Ames]  ali follow..  15  1MKA--WKSIFVLCSFLLMLSGCFHQEEKKVEPKKKESIPELKKVGQKVKETGWGTFKLEQIHSVNQTFEVAPMKIHVQD.................................................................................................................................................................................................................. 85
9 -13.500IDP05677 hypothetical protein lmo1068 [Listeria monocytogenes EGD-e] lmo1068 [Listeria monocytogenes EGD-e]  ali follow..  15  1MKK--WMVIISIISLVALLGACGNNDNEKDQEDKSTTDSTTKKAKSSSNESNKAAETKENDTNDKAATTDKGSSNPTKEEKDTSTTTDTPKKETPK................................................................................................................................................................................................. 94
10 -13.100IDP05588 putative lipoprotein [Bacillus anthracis str. Ames] BA_2883 [Bacillus anthracis str. Ames]  ali follow..  11  1MKVVKIALLCLTFTCIFALAACKGTDEKKETNPTSENSKNEQNTSSEGKKEP------------------------------------------------------------------------EVKSNTDSNSKDIVINQKSINHVKNLFELAKEGKVPNVPFAAHTGDIEEIEKAWGKADKTEQAGNGMYATF--TNKNVSFGFNKGSQVFDVRSYHAELKSITL--------QEIEKALGKPNSVKGNGEDKIYVYKVNK---QFELKFIIPKSGKVNHISVFSPE 206
11 -12.600IDP05148 putative lipoprotein [Bacillus anthracis str. Ames] BA_0177 [Bacillus anthracis str. Ames]  ali follow..  11  1MKK--IIFVSSLVLAISLGVGCSNEKTAKTDEPKKESVQK----EKELTAKDVFKKTNEAFKNEEHVTMTYGVGVKAEGTEMDIVKAKMQLEPKTNSRSEMNISGTDVVVYTVDGKVAGEVKKPNTGEVITVPEEQLNAGGMKATQDIIDKLEVPEVVLDKMKLEKSGDKY------------------------------KLKFTLKGQETESMLTSMDETQKKMLQAQNAKIEEVDAEYIITKDFKYESAKIDMIMSSNGKDKAHIITNAKYTSYEKFDPIQLPAAK 254
12 -12.500IDP05267 hypothetical protein lmo0255 [Listeria monocytogenes EGD-e] lmo0255 [Listeria monocytogenes EGD-e]  ali follow..  25  1MKK--FLSILSILVLALLVTACGSDSSDKKSAKKEEKM-----ETVTYIADING-------AKLEATFSHVGDNLRK.................................................................................................................................................................................................................... 63
13 -12.400IDP05010 putative lipoprotein [Bacillus anthracis str. Ames] BA_4934 [Bacillus anthracis str. Ames]  ali follow..  22  1MKK--LMLFVLLLTASILLIGCSTKKEKAGMNLEKAQKVEI........................................................................................................................................................................................................................................................ 40
14 -11.900IDP04063 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_0514 [Clostridium perfringens ATCC 13124]  ali follow..  12  1MNKRKIVSILTTSLLVTSLVGCVGSNNKANTSSNDSKVQESVENQSDFND-----RTYVGKTYNEVSENKGTENIEEVAGKKVIVSSSYSTR--YNANLILELDDSKNISAVSVHFKGIEPENILENIKKVLGEPKISKDKENGDSKV............................................................................................................................................. 148
15 -11.900IDP91154 hypothetical protein SAOUHSC_00808 [Staphylococcus aureus subsp. aureus NCTC 8325] SAOUHSC_00808 [Staphylococcus aureus subsp. aureus NCTC 8325]  ali follow..  17  1MKK----VMGILLASTLILGACGHHQDSAKKESTSHKKKENDNEELN-KSKKNMDIKIKGDTSDKFEAKIKEPFIINEKDEKIAFKMEITAKKDDK................................................................................................................................................................................................. 102
16 -11.400IDP05554 hypothetical protein CD3669 [Clostridium difficile 630] CD3669 [Peptoclostridium difficile 630]  ali follow..  17  1MKNKKIMLVLSILSISIFAVGCTNAQNGSDSSKKETKSNTNVEQPKEENNTEKEVPNNKAKPTPKEE.............................................................................................................................................................................................................................. 67
17 -11.200IDP05121 conserved hypothetical protein [Bacillus anthracis str. Ames] BA_0915 [Bacillus anthracis str. Ames]  ali follow..  15  1MLKK-FTTCILGGALVFNLSGCGNTSDKTSSESKETNSKQEEKNVQTTDEAKTKENTKQKNTEQTKE.............................................................................................................................................................................................................................. 66
18 -11.200IDP05448 hypothetical protein lmo2594 [Listeria monocytogenes EGD-e] lmo2594 [Listeria monocytogenes EGD-e]  ali follow..  15  1MKK---TSIIFIFCTLLFVTACSTSENQTQATEEQVETDAILINNFKEKKDKYNPEAAIRFDIVDKYYDETGNKIKITD.................................................................................................................................................................................................................. 81
19 -11.200IDP05407 conserved domain protein [Bacillus anthracis str. Ames] BA_1485 [Bacillus anthracis str. Ames]  ali follow..  12  1MKN----LVIGLVALLFVVVGGFYIKKYQETTETVGDVQEVKWDVSNGKGNEKADIVFQLLNNKSSEVRGVNDQITFAGNGSYKVSSKIAKDEGYTIFLYEDKNKSVQSFAKKDFGKEIDEKNKKKVKFPIDSVLTKKIGEYEVSLLFGALHPNEPVTLT----------------------------------------------------FQFQAKKGEKLKLHAERGEVEALYIVDETRENFLYAIPVDTDEQLQYRIT----TYKIWGDFYINGKKYEVQVQKRK 255
20 -11.200IDP05485 putative lipoprotein [Bacillus anthracis str. Ames] BA_3234 [Bacillus anthracis str. Ames]  ali follow..  14  3MKGRNVSVVFIAIVI-FIIAGCSNMIGNEDQTIKVQKHVDDTYEDLKVVTDNKQVQQVKKILN---DAHFENKKVQMSRPADYHFVFQFKNPKIEAKATLYQIWVIPNKDKIEIIAGNSQYVQLEGKNAAT.............................................................................................................................................................. 129
21 -10.900IDP05417 conserved domain protein [Bacillus anthracis str. Ames] BA_4788 [Bacillus anthracis str. Ames]  ali follow..  9  1MFKQFKMIIAVFAVLFTFIATLGLQDAKAATKLAD----KYNIAFTVWKGDKDESSRMNRYFESPATLTV--------KNGKQYVSFKVKDST.................................................................................................................................................................................................... 82
22 -10.900IDP05515 putative lipoprotein [Clostridium difficile 630] CD1687 [Peptoclostridium difficile 630]  ali follow..  11  4IVKKSISLMIILTIFIFMLTACEKDEQPDSVDIQTEDKNEIKIDEGNAKVDEGDKVDTSTKVENNSTFNISNVELIYDENKKI-----ISSDSKALLDMTLMPGKVAYIECGHKTFVKGVEVYAYEYEAEGKIVYVNLKENTINIRNNNIKLENSSQYEVLSTSELKKVNESNEGITYQVKVKNSSSKD-------LGNIILKTAEVNENGEYLTVNRVPSYKILKPSEETD--------IDILCSTKAKSVEIVGYTYDDIKEKANVDIDLKSHK............. 273
23 -10.800IDP05275 hypothetical protein lmo2686 [Listeria monocytogenes EGD-e] lmo2686 [Listeria monocytogenes EGD-e]  ali follow..  10  1MKEFLFFAVFTFIMIGVGVINASASEIENPDNIQEAEVETFDLNGNIAQELEDGTGTLGVMPIIDERPLLKGTYSLANGTSTWKIYWY---SGVYNCSFNAKINVSKGKGKITSAYNPWYQFYSPGLDVKKSKLSKTSSGSSAS................................................................................................................................................. 147
24 -10.700IDP02672 hypothetical protein FTT1602 [Francisella tularensis subsp. tularensis SCHU S4] FTT1602 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  13  1MKK--QLFAISITTALLVLSACGQTGPPDEDKLNSGSTLAKSGSSIMVKQNQQNNSTSTSDNQSDTSTKVDNDPTAPVRNNN............................................................................................................................................................................................................... 83
25 -10.600IDP05242 hypothetical protein lmo2079 [Listeria monocytogenes EGD-e] lmo2079 [Listeria monocytogenes EGD-e]  ali follow..  17  1MKKGILLSILLALV--LVISACGESAEENGMNVPDQYTYTTSFAVNDINVSSTDPSAQTMGILKDIKLSVTTSTDKKANKSEAKFNVTSTNNL.................................................................................................................................................................................................... 106
26 -10.600IDP04392 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_1500 [Clostridium perfringens ATCC 13124]  ali follow..  13  1MRV--LKGVILAIIPAFLFMGCGEFSKNDVEKLSEKEEQILNLTDNRVSKNKGYRIDLEGKEVKNEPILTSVSETYEKGKENITLGINFKDDNRINCLLGGDGAYSRHNYKAEENIKDYFSANFAGDYDLELEKGKR........................................................................................................................................................ 154
27 -10.200IDP05460 putative lipoprotein [Bacillus anthracis str. Ames] BA_0985 [Bacillus anthracis str. Ames]  ali follow..  17  1MKK--IISICALTALSFTLIGCASTSATDKSPQQEHKQNAFQLNSANITLQTTNNTTSKSQTDNKEMIQSIVSAVQKGTPKTITLDQKKRKSAHSTITVTYK........................................................................................................................................................................................... 106
28 -10.200IDP05592 putative lipoprotein [Bacillus anthracis str. Ames] BA_3194 [Bacillus anthracis str. Ames]  ali follow..  17  1MKI--LKFGIIGALSITLLIGCTSNSNETKASNKEVNTENIKTIFTSMESAETLLLDQEAKNYIHSKMKVSDIVIAKASDETHGEGYDLREDNSKKI................................................................................................................................................................................................ 152
29 -10.100IDP02402 hypothetical protein FTT1778c [Francisella tularensis subsp. tularensis SCHU S4] FTT1778c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  15  1MKLRKVLIATLLGASALSLSSCGTAAYISGEYSMNMSGSVKDIYNATLKAQSNDDFVITKKSITSVDAVVDGSIKVDSTS--FYVKIEKLTDNASKVTIKFGTFGDQAMSATLMDQIQK.......................................................................................................................................................................... 128
30 -9.850IDP05451 putative lipoprotein [Bacillus anthracis str. Ames] BA_0580 [Bacillus anthracis str. Ames]  ali follow..  9  1MKK-----IGTMLLFSILIAGCTQAQPDLKKPKKEAIATSSTQVNAPSFFHLSVLKDVNWEETPEEKIAMADSPIIANEKNEIMWYFLDPEMPTGKLSIIALKQGSVTPTPLLF............................................................................................................................................................................... 121
31 -9.810IDP05607 putative lipoprotein [Bacillus anthracis str. Ames] BA_4862 [Bacillus anthracis str. Ames]  ali follow..  16  1MDRHKFSMFMFLGVVLIILAACTTKSVEQVAVKEVPKEGYI------ILRNETVFLADDKTFETKIE.............................................................................................................................................................................................................................. 62
32 -9.720IDP93899 hypothetical protein YE3559 [Yersinia enterocolitica subsp. enterocolitica 8081] YP_001007717 [Yersinia enterocolitica subsp. enterocolitica 8081]  ali follow..  9  1MKSKKSYSYYLILILSLVLSGCTLPTDNSHNYNGGYIQGNILSNSKTIPENVKITLSLSQNKASGEKEYMLHEYSFMTKTKSLTIPFRLQ-LSSQPLNISVRVEKEGK..................................................................................................................................................................................... 118
33 -9.680IDP05488 putative LPXTG-motif cell wall anchor domain protein [Bacillus anthracis str. Ames] BA_4789 [Bacillus anthracis str. Ames]  ali follow..  11  1MKKVSVLPAFIITFVCMLAFLVMPYGNASAKLADGTYDINYVI----QKAENDSASMANDYFEKPAKLIVKNGEMKDESADKRTVEFKVDDLSKPKIHVVVPNANYDHHYTIRFAFDANVKAVGGDNGVAATTKNNDQAKTDTQVKEEKTKVESKETAKEVNKETKNENGKAEK................................................................................................................... 203
34 -9.620IDP92719 hypothetical lipoprotein [Francisella tularensis subsp. tularensis SCHU S4] FTT0991 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  12  2MKVRYIHTIFLFILSVVLLASCGFHPRGVLSDGNAGNFDSLVGTKVYIKADNYNAIVVNDEKSADYIINIQDVKTSIVGGASYTVTYNVVKPDDKTPVISINAQQFWQSNSGTQLAQNNEANRIYSYLEGQLVNNMATQIAALLPSKNTTQASTSSDNSLQ................................................................................................................................ 191
35 -9.610IDP05429 hypothetical protein lmo0791 [Listeria monocytogenes EGD-e] lmo0791 [Listeria monocytogenes EGD-e]  ali follow..  12  1MKKG-LFSMVLVLAMVLVLSACGASRVEPKKAGEITDKVKDVYGEDGSKFEKEFETSFKESFISTFTASFSSDVNLDKQVDEFYDALRKQVNEKTSYTTKVTNDDKESPEIQFAIKGLDMKGVQTELVEELTKAATADPSIASDDQKMAE........................................................................................................................................... 159
36 -9.550IDP05476 putative lipoprotein [Bacillus anthracis str. Ames] BA_2745 [Bacillus anthracis str. Ames]  ali follow..  19  1MKK--STLILCSLCLGFSMTACEQKKEVKKQTATSSTVMENQ-KKESININHFSNI--EGMTYKEVKDLIGFEGDLLIEEGV............................................................................................................................................................................................................... 78
37 -9.450IDP05480 putative lipoprotein [Bacillus anthracis str. Ames] BA_3532 [Bacillus anthracis str. Ames]  ali follow..  28  1MKKKLTILFSIVCI--LVLAACGQTKANKEETKKVMSQKSL........................................................................................................................................................................................................................................................ 39
38 -9.410IDP06532 prophage superinfection immunity protein [Enterococcus faecium DO] AFK58444 [Enterococcus faecium DO]  ali follow..  14  20YKKVWFWVLAVILIIIIGSALNGGSDSNKASDNGGEKVTKSSTSASSSKEEKSDTFYKIGDTVKVGDAEYTLNSVELTDERNQF-----ENQPAQVVKITYTVKNDGDSD................................................................................................................................................................................... 125
39 -9.260IDP91374 outermembrane lipoprotein [Vibrio vulnificus CMCP6] VV1_1919 [Vibrio vulnificus CMCP6]  ali follow..  18  1MKN-----IGLLLLASLFLAGCTTPTHLPLS---GSQAIEIRIDDQFNPKHCQYLGTVTGNEMQGAVNDLKNNAKELDADT................................................................................................................................................................................................................ 87
40 -9.100IDP00403 gene: pal; peptidoglycan-associated outer membrane lipoprotein YPO1125 [Yersinia pestis CO92]  ali follow..  16  1MQLNKVLKGLMLALPVLAVAACSSNKSANNDQSGMGNIVYFGFDKYDIGSDFAQMLDAHARSNPSDKVVVEG---HADERGTPEYNIALGERRASAVKMYLQGKGVSADQISIV............................................................................................................................................................................... 141
41 -9.080IDP05596 putative lipoprotein [Bacillus anthracis str. Ames] BA_3366 [Bacillus anthracis str. Ames]  ali follow..  8  1MSKMKWFISLLLSL--GLLAGCEEAAVKLEKKVEPKQEEVAKQEEKKDEAKPEEKPEEKQAEQEQNKQDEQKEKQEQKVEEKPKEEKPQAQLEVKKEEKQQEQPKEQPAVNKQPEQQKAQEEKQQQPKAQEVKEEAKVVNQPKETPKQEQKKKPEENNSVPTP.............................................................................................................................. 161
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. Discovering new genes with advanced homology detection. Trends Biotechnol. 2002 Aug;20(8):315-6.