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Query: IDP05538 putative collagen-binding surface protein [Clostridium difficile 630] CD3392 [Peptoclostridium difficile 630], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKKILKRLCTGFLAFATVVTALPSTPVHAESKQYWTESAERVGIIEKVMNDGSIGSTFNEGMMKVEGETAYCIDINTDFKNGYKTRADASSRMSADQISDVALSLEYVKQYGEAHKELNYKQVYLLEQCVVWQRLSVHLGWQCDNVRASYDEIPKATQDEVFAGAKAFVKENKGRYECGGYIYSGEGQELGQFWAKLNVGNAKLQKTSSNTSITDGNGNYSIAGATYGVFSDKDCTKQLATLTTDKNGNTDVIEVKAGTVYIKELSAPAGYKVDKTIYPLTIKAGETATLKVSDTPKVTDTLVELFKIDMETQKDNPQGNASLAGAEFTWKYYAGFYNKDNLPAEATRTWVTKTIAETDSDGTTHYITKLADAYKVSGDSFYMQDGKAVLPLGTLTVEETKAPNGYLLDGAYMQAGDKSEQIKGLYLTQITEDGDLAVLTGSNQFSVSDKVIRGGVKIQKRDLETGDTKPQGSATLKDTAFDIISLNDNAVLVEGKLYKKNEVVKTIHTDLEGVASTSADLLPYGKFRIVESEAPDGYLTDGAKPIDFAITENGKIVDLTDEAHSIYNQIKRGDIEGVKIGAGTHKRLADVPFRITSKTTGESHVVVTDDNGQFSTSADWASHKHNTNAGKTSEDGVWFGASEPDDSKGALPYDAYIIEELKCESNKGFELIPPFEIVVSRNNLVIDLGTLTDEYEKEISIHTTATSKDGEKTILAGKEVTIVDTVKLDGLTKGTKYQLKGWQMLKEENAELIIDGKRVENDYTFIADEEEMKVEISYTFNASALGGKNLVTFEELYDLSNPDEPVKVAEHKDIEDDGQTVLITERIIKIHTTATDKDGNKELEAGKDVTIIDTVTLEGLEVGTQYKLVGWQMLKEENAELLVNGKRVESDYTFIADSENMKVEVAFTFDATSLDGKQLVTFEELYDLSNTDEPKKVTEHKDIEDEGQTITFKEKPEVPEKPEQPQTPEKPSRPSDSPKTGDSTNLMAFIVMLLVSGGGLAGTYLYKRRKMKKSLast
1 -280.000IDP05538 putative collagen-binding surface protein [Clostridium difficile 630] CD3392 [Peptoclostridium difficile 630]  ali  100  1MKKILKRLCTGFLAFATVVTALPSTPVHAESKQYWTESAERVGIIEKVMNDGSIGSTFNEGMMKVEGETAYCIDINTDFKNGYKTRADASSRMSADQISDVALSLEYVKQYGEAHKELNYKQVYLLEQCVVWQRLSVHLGWQCDNVRASYDEIPKATQDEVFAGAKAFVKENKGRYECGGYIYSGEGQELGQFWAKLNVGNAKLQKTSSNTSITDGNGNYSIAGATYGVFSDKDCTKQLATLTTDKNGNTDVIEVKAGTVYIKELSAPAGYKVDKTIYPLTIKAGETATLKVSDTPKVTDTLVELFKIDMETQKDNPQGNASLAGAEFTWKYYAGFYNKDNLPAEATRTWVTKTIAETDSDGTTHYITKLADAYKVSGDSFYMQDGKAVLPLGTLTVEETKAPNGYLLDGAYMQAGDKSEQIKGLYLTQITEDGDLAVLTGSNQFSVSDKVIRGGVKIQKRDLETGDTKPQGSATLKDTAFDIISLNDNAVLVEGKLYKKNEVVKTIHTDLEGVASTSADLLPYGKFRIVESEAPDGYLTDGAKPIDFAITENGKIVDLTDEAHSIYNQIKRGDIEGVKIGAGTHKRLADVPFRITSKTTGESHVVVTDDNGQFSTSADWASHKHNTNAGKTSEDGVWFGASEPDDSKGALPYDAYIIEELKCESNKGFELIPPFEIVVSRNNLVIDLGTLTDEYEKEISIHTTATSKDGEKTILAGKEVTIVDTVKLDGLTKGTKYQLKGWQMLKEENAELIIDGKRVENDYTFIADEEEMKVEISYTFNASALGGKNLVTFEELYDLSNPDEPVKVAEHKDIEDDGQTVLITERIIKIHTTATDKDGNKELEAGKDVTIIDTVTLEGLEVGTQYKLVGWQMLKEENAELLVNGKRVESDYTFIADSENMKVEVAFTFDATSLDGKQLVTFEELYDLSNTDEPKKVTEHKDIEDEGQTITFKEKPEVPEKPEQPQTPEKPSRPSDSPKTGDSTNLMAFIVMLLVSGGGLAGTYLYKRRKMKKS 1014
2 -263.000IDP05502 putative collagen-binding surface protein [Clostridium difficile 630] CD0386 [Peptoclostridium difficile 630]  ali follow..  94  1MKKMLKRLCTGFLALATVVTALPTTPVHAESKQYWTESAERVGIIEKVMNDGSIGSTFNEGYMKVEGETAYCIDINTDFKNGYKTRTDASSRMSADQISDVALSLEYVKQYGEAHKELNYKQVYLLEQCVVWQRLSVHLGWQCDNVRASYDEIPKATQDEVFAGAKAFVKENKGRYECGGYIYSGEGQELGQFWAKLNVGNAKLQKTSSNASITDGNGNYSIAGATYGVFADKDCTKQLATLTTNENGNTDVVEVTTGTVYIRELSAPAGYKVDKTVYSLKVEAGKTATLKVSDTPKVTDTLIELFKIDMETQKDNPQGNASLAGAEFTWKYYAGFYNKENLPAEATRTWVTKTIAETDSDGTTHYITKLADAYKVSGDSFYMQDGKAVLPLGTLTVEETKAPNGYLLDGAYMQAGDKSEQIKGLYVTQITEDGDLAVLSGSNQFSVSDKVIRGGVKIQKRDLETGDTKPQGSATLKDTAFDIISLNDNVVLVEGKLYKKNEVVKTIHTDIEGVASTSADLLPYGKFRIVESEAPNGYLTDGAKPIDFAITENGKIVDLTDEAHSIYNQIKRGDIEGVKIGAGTHKRLADVPFRITSKTTGESHVVVTDDNGQFSTSADWASHKHNTNAGKTSEDGVWFGTSEPDDSKGALPYDTYIIEELRSDSNKGFELIPPFEIVVSRNNLVIDLGTLTDEYEKEISIHTTANSKDGEKTILAGKEVTIVDTVKLDGLTKGTKYQLKGWQMLKEENAELIIDGKRVENDYTFIADDEAMKVEIAYTFNASELGGKNLVTFEELYDLSNPDEPVKVAEHKDIADDGQTVLITERIIKIHTTATDKDGNKELEAGKEVTIIDTITLEGLEVGTQYKLVGWQMLKEENAELLINGKRVESDYTFTADSETMKVEVAFTFDATSLDGKQLVTFEELYDLSNPDEPKKVTEHKDIEDEGQTITFKEKPEVPEEPETPQTPEKPSRPSDSPKTGDNTNLYGLLALLLTSGAGLAGIFFYKRRKMKKS 1014
3 -101.000IDP06545 gene: fms18; LPXTG family cell surface protein Fms18 [Enterococcus faecium DO] AFK59452 [Enterococcus faecium DO]  ali follow..  17  1MKKPRFKNWRLLATLSLLCQTIGGSLGPTIAFADEITHPQTVTVELDLAHQYAVEGTFSDGVYNGVKQDIFCIEPSIKRSDGSAVNIAAIESKINQAIADKPSFHNSTVKTVLGQSTTVTDTNGLNLSEFDEVVENIAN--RVNGNQLVITPNANSKESGELTLKKSANTGTPVAYKMAGQQTLMAGAIDKPNTDVETEGSLKIKK-------VDKETGNVVPGTVFHLDFGKT--LPAKDVTTDKEGIATLDEIHGAKVTITEKSVPAPYTIDTTPITATIKSGETISVTSKNTRE--KGQIILNKMGVETGTDLWNDKYSLAGNTFAIR-------------KDSPTGEIVQEMTTDEKGHAETPKEIANA----------------LELGTYYVTETKASNGFVNTFKPVKVELNYVNQTVALVT--------------SNVKGQNQEITGETTLTKEDKDTGNE-TQGKAEFKGAEYTLFTAKDGQAVKWSEATKASDETVTLTLDEKNQVAV--KHLAINEYYWQETKAPEGYTLDETKPVSIKKVDDNEKNAVITRDVTAKEQVIRFGFDFFKFAGSAETGFNDLTFKVSPLEGTSAYNEQLGFDGYGKF-ENLPYGDYLLEEVEAPEGFQKITPLEIRSTFKENKADYTKSEYIFTITEKGQKQPIKTVTVPYEKLTNKAFSVSLNRPEEEDSLTSLGTWKDGGKELTDLDSTELVDKLSYNLHEIKEDWYVVAQAIDVEATKAAQEKDEKAETTATLANKEKTGTWKILHKLTAEQVLDKTIVLFNYVYEKPYEAGDDPVAKDASLNNQAQTVNCTVERVSIQTKAHLEDGSQTFTHGDVVDMFDDVSIHDVLDGSKEAFETILYALLPDNTTKEIWKSGKIDYE-VNDKEFTKTVLAEKVDTSKYPEGTSFTFKEINYGKDGNI--NGKHNEDLKEKTQTLTPKKVPTTPSAPEQPEIPTVPSDSKTFPQTGEKNSNVLLFIGFTLIFATAGYYFWNRRN..... 1075
4 -74.500IDP05077 hypothetical protein lmo1115 [Listeria monocytogenes EGD-e] lmo1115 [Listeria monocytogenes EGD-e]  ali follow..  14  5SKSLLRKMTTYIMVLVTICGTFFTSSTSVHASDLVLNEPTAYSYTGVSPHLGYAITHNPIYVMKMDGKKVFCVESEVGTSIVYTKPQHQTLVEFHLESAKQATVKVDVIKLGNVQITKVDEETGRPLPDTTMKFEYNG---TSTELVTDSNGIALIKDIPEGTKITITEVKAPNGYVNKGVSQVVTIEPNKTIENKEQLGIATLTKAGEEAKHTFKYNANVVAGVTYRIEATQDKGDTVATVTTDEKGQWHSPNLYLGEYQAVEVSAPAGYILDTRPIPFSLTYAGQEVTAIKATNEFQTLDLRLFKDEESILSQPEIEVIQGQEKVFGVFTREAQALTDEVHVPANAL---LGYQTVSDGVASFELK---------------------LPQGKYYLKELEAGTSHVLNDTEYDFKFTAENNNATYPIYIYQDTVAVTMLKIARTPIINKLHFNEFIIKKLNEQAIGVEFNYDGLGTGAIFTLENEDN-------------EVIQEVTIDKDGQGNF--KNIPVGTFYLKEKSASSTHYLMSEKVIRIESTKDGIKAFDEDDKLEIENDLKKGTAELTKKDVSTGELLPNTGIRILDEEKNTIAEGRTDDKGIYTF-EKLPAGKYYFQEYDAPTGYQLDDTPMLFEITENGEVVKCEMTNNK................................................................................................................................................................................................................................................................................................................................................................ 829
5 -73.700IDP05452 collagen adhesion protein, C-terminal [Bacillus anthracis str. Sterne] BAS5207 [Bacillus anthracis str. Sterne]  ali follow..  16  11......................................................................YALA-IINLSKYYDKNTSPIKFTITESQTTSATVTAKNSLTKGGIEKVNAADEKETLEGAVFKIVNRDTNEDARTNLVTNSEGKLVVDDLRPGNYKLIETKAPTYYDVNVEPIEFTIEKGQQTLLPLTFKNSLTKGKVKLIKEDDVESSIALAGAVFTLQDANG-TEIAKDLKTDEHGVLVIPDLAPGDYQFIETAAPEHYKLDQTPIKFTIERSQTKHVFVTATNSLTKGSVELIKVD------DVEENTTLEGAVFKIVNKDGHDVRTDLT--------------TDKNGRLVV---------------------DELPPGDYEFIETKAPTHYDLNETPIKFTVKKGQEKIA------------------SVTATNSLTKGAVELSKVDDIDGS-------TLKDAVFKIVDMNGN------------DVRTDLTTNKDGKISV--SDLRPGDYQFVETKAPTHYDLNQTPINFTVEKSQTATASVT-----AKNSLTKGAVELTKVDDIDGTTLEGAIFKIVDQNGNDVRTDLTTDKDGKISVSDLRPGDYQFVETKAPTHYDLNQTPINFTVEKS--QTATASVTATNSLTKGAVELTKVDDIDGATLEGAVFKIVDMNGNDVRTDLTTDKDGKISVSDLRPGDYQFIETKAPKHYDLNQNPINFTVEKSQTATASVTATNSLTKGAVELMKDDIDGTTLEGAIFKIVDSNGHDVRDLTTDKDGKISVSDLRPGDYQFIETKAPTGYDLNAKPIPFTITKGQSQVTSVTALNSL--------------TTGSMELTKVDIDHNGTL--------EGAIFNILDQDGKVVRE----GLKTDGHGKLIVNDLKPGNYQLVETKAPEGYQLDASPISFTIEKAQASPLQITVSNKKVESSSGGDNKPITPPNK............................. 814
6 -62.300IDP05655 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo0159 [Listeria monocytogenes EGD-e]  ali follow..  15  1MGNFLKKVGLAFLSILIVASTIFQTTVVKAATSYGSQFLNTVELLDKDGVPQTDFGYYDNMDVHYTGDTM-----DFTLPSQLALATDLATATVKKATNQVTLVFSDYVEKHSDVKWTAFNQKVITGNETVDLVFPLENGTTVIDVEVGEKTPVSPTETLFKYGWVDASNPSLIHWVVRVNYAKVNIPNAVFTDITLNFDSIKAFHGTYSADKEDAKTKATLEGAEFKLVDSKG-TVLQENITTNASGQLSIADLKFDTYQLIETKAPTGYKLDTTPVEFTIGENNQAITVTKENTL--------NTGSVELTKLDAATKATLAGATFELQDKEGNTLQTDLK--------------TDENGVLKV---------------------TDLVPGSYQFVETSAPTGYKLDNSPVSFEVIAGETDQVVKV-----------------TKENTLEVGSVELTKLDSATKA-------TLAGATFELQDKEGNTLQ------------TDLKTDENGVLKVT--DLVPGSYQFVETSAPTGYKLDNSPVSFEVVAGETDQVV----KVTKENTLEVGSVELTKLDSATKATLAGATFELQDKEGNTLQTGLTTDENGVLKVTDLVPGTYQFVETKAPIGYELDTTPVSFEIVAGETDPIVKVTKENTLVPPTPVPPTP-VPPTPVPPTPVPPTPLPPVPYEPTVPPTKPEVPVTPKKTENSEDSPKTTPIRITQSLPKT....................................................................................................................................................................................................................................................................................... 767
7 -51.900IDP05088 LPXTG-motif cell wall anchor domain protein [Bacillus anthracis str. Ames] BA_0871 [Bacillus anthracis str. Ames]  ali follow..  18  302...........................................................................AVVETKGGSINGQAYVGGLHQRDGFEVHN-PAAKKGNLQIKKVDENNENIVLKDAKFDVIDKE--NNVVDTVTTNEKGIAEVKDLPFGDYFVKEISAPEGYIKIDAPVKVTIDNTNIITKKLENGQLKLLK-------KDSESGQLLPGAKFDVIDKDG--KVVETIVTDDKGEALSKQLPVGSYTLKEVEAPKGYELSSSSVSVDVEANKVVTVDVVNKPEKVTGQFEVVKVDAN------DKTKLLSGAEFEVYKDGKKVAE----------------LKTGESGKVMS---------------------PKLPLGEYTVKETKAPAGYKLSDKEWKVTIQNEKEVV-------------------KVEAENEKILGSLQIIKMDDKDQTK------RLAGAEFTLKDVKGN------------VVKEGITTDKSGTVKV--DGLVPGEYTLEETKAPEGYKALEVTIEVNVVANEVVKQDVLNE---KVKEEITGQLEITKVDADINKKLAGAVFEIW-KDGTKIDTLTSDENGKAIS-KELDPGDYILKEVQAPEGYELSDKEIEFTISNQKFEVVKLQITNKKETSKGPENPG--------------------------------------------------------------------------------------------EETEKPGEETEKPGEETEKPGEETEKP---------------------------------------GEETEKPG--------------EETEKPGEET-EKPG-----------------EETEKPGEETEKPGEETEKPG----------------------EETEKPGGETEKPGKETEKPGEGMENPDKEKENPTLPEKGQGTSHAQQLPATGHDMNYL-PFIGFALVLLGIRLRFMTKNN..... 969
8 -51.700IDP01796 cell wall surface anchor family protein [Bacillus anthracis str. `Ames Ancestor`] GBAA5258 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  18  1MKRKMVGKWFSFLSALIILLGIAMPQVKAEVMNRETYK------MDWSYSNSKQREIKTEIIKTASGSIAYCLTPDLRSPNGEDLPEM----GKTSDAVYRVLLNGYPQKGPSELGVATTEEAHYATQLAVWIAANNENGEEKSTLSINEKFKILLPKDTSSGNFKMKVKSTLTNLQAIAFKGSEKVQNTTVLVNWESVGSLKIMKLG--------EKKEVLKGAVFEVSNENF----KQNVTTSDKGIAELGNLPIGIYSVKEIQAPAGYVLDRSVKKIEVKTGETAVLELKNENV--KGELEITKVDVA------DGNTKLPNAEFTIYNEQGKEVVK---------------GKTDEKGVAKFK----------------------LPYGKYTYKETIAPNGYVINEETFAFEIKENGEII-------------------KHIVQDKKVEGELEITKVDVADGNT------KLPNAEFTIYNEQG-------------KEVVKGKTNEQGIAKFK---LPYGKYTYKETIAPNGYVINEEK-FGFEIKENGEIIKHI-----VKNKKEEKASFPSKPNKPTPNGKPSADVKPMQQPSTHNVRLPATGGVSNQFTSLFVLGISFI................................................................................................................................................................................................................................................................................................................................................................................................... 612
9 -51.200IDP05697 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo2178 [Listeria monocytogenes EGD-e]  ali follow..  17  962...........................................................................ATTASPDYGSLPMTYKSRTTSISPAFTIGSGSGTATIGEITKVDKKDNSKKLTGAKFQLYT-LEGDKAGQEATTDSDGKIVMDGLQSGKYKLVETEAPTGYTISDEYKDGKEITVTADIATSVTIENTEQTGSVVLLKEDSATKDAIAGAEFELQ-NADGTKVADNLVSNADGKIEVTDLAPGDYQFVETKAPTGYVLDGAPTKFTVEFNQEAAVIVTKENTAKTGSVVLTKED-------SVSKATLSGAEFELQNATGTKVKDNLT--------------TNADGKLEV---------------------TDLAPGDYKFVETKAPTGYELDATPVTFTIEFNQATAV------------------NVTKENVAKTGSVVLTKLDSKSRS-------NLAGAEFELQTKLGVSLK------------DKVVTEANG--QLQIDNLAPGDYQLVETKAPTGYDLDATPVEFTIEFNQKAPIQVTKT-----NTMSTGSVVLTKTDGETKALLANATFKLVDEDNNVTENLTTDASGKLEI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TNLAPGDYQLIETKAPAGYELDTVPVDVKITFDQKETLQVTKTNLKT----------------VVSGKVIAEFVD-----TKGNVLAEKEIHTGIVGDKYATKAK------DIKGYKLTKQPTNKEGVFKETEQKVTFVYEKNKAPIVVNKPVTPVKPTKPVDPAKKPTVKTSLPSTGDESPYGIIFTGLFASFMGLFLL---RKSKKIND 1599
10 -51.200IDP05567 pepdidoglycan bound protein [Listeria monocytogenes EGD-e] lmo2576 [Listeria monocytogenes EGD-e]  ali follow..  18  918................................................................................................................................................DTQTTDKNGVIEFDDLVYGDYTLKEVSAPEGYTLPTASTENIQVKLEQDEKVVQEKMPIKETGEVHLVKTDKATGATLAGAEFSLYDKSG-AELQNGLTTDENGELTIHNLDLGSYYLKETKAPEGYKLSEKTWEFSVESGQVDAIEIQAENEKDLGEAVLTKVD-------SETNAKLSGAKFNLLNDSGEVIQTNLV--------------SDENGEIRV---------------------QNLEPGDYAFQETEAPTNYDLATNTWPFTIVAGQTSATMVTAEN------------NKTGKPDVDTGEVILVKQDSATGE-------TLEGAVFDLMTADGA------------IVASNLTTDANG--EITVTNLAPGKYSFKETKAPEGYELATDVWEFTIAPNQPEKITITAENTKLAPIPDAGSVKIIKQDSENGVRLAGAEFSLIAENGETLQTNLKTDEAGELEVNNLAPGNYRIQETKAPDGYQLESTPWQF---------------------------------------------------------EIVANDTSQVTVIAENAKLEPDVAETGAVRLIK-------------------------------TDSETGTRLSGAVFSLLDESGKVIQA---------------------------------------NLTTDENG--------------EIFIDGLTPG-NYSL-----------------KETKAPDGYELAEQP----WNFQIVKGQVDAVIIKAEN--------------------SPIIANGAISFEGDETDKPESIETDTLATEVTKLPQTGDKTSFPRVILGGSAVLMSLLYL--RKKSS.... 1530
11 -48.000IDP05436 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo2085 [Listeria monocytogenes EGD-e]  ali follow..  11  1MQRKLIGFILMVLLIIGSTSEKVQASPTSSNGWQLKWA--------------------------KNND--FED-VDITDYGQNAGTTNVWMVNQAGVDAWGTTNPTGNELNSDGIGPVYQDIRTIPGSNLTWKFSHRDTADLLIGSPESQTEVSRVSNGETWGSFEGNYTVPAGQTITRLTFNPISTANGSLTSGNFLDDVQDVVWYDFNGDGIQQDSEEPAPGVKVDLLTKDG--TFKESATTNNIGSYLFTDVLPGDYQVKFSLPNNDFIFSKANQGNDKSLNSKPDKTGIASVNVPNLKSENFDTNGKVEIQKLSGDKALSGAVYAIKDNSQSEVAK---------------ITTNQNGTGTA---------------------EGLPPGNYTATEVTAPLGYQKNTTPKKFTITYGDTNPV------------------KLTFQNAEKTGSITIFKQDEANKK-------GLANAVFDVKSIDGT-------------TLKKVTTNSKG--YALAENLQPGTYVITEVTAPPGYEKSANEIRVTIPFNPQKTINIT-----FSDNKIMVPLKPTPTKGSTVVKVSGETTKITALPQTGDSSSSSTIFTGLLIV--VASGLFVYRR................................................................................................................................................................................................................................................................................................................................................................................................. 561
12 -46.600IDP05223 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo0160 [Listeria monocytogenes EGD-e]  ali follow..  14  1MMSNLKKFGLAFLSVILLVNVIFQTNFVKAATNYGSDFLKTVELLDADGNPQTDFGYYDSIKVHYTGDTM-----EFVLPPELKIVTDLDFSLKDHDGNTVGHVIAKKSTGQVVITFTDFVEKNSNISGYLWVVRVNYSKQNIQNAVYEDTDSVKISYYTTSTDNGASPNYTNKGQLTGDNFIKQEIEVATPTSGGGGGGE-GTTGSVELTKTDDSSQKNPLEGAEFKLVNGAG-ATVQTGLKTNADGKLAISNLKYDTYQLIETKAPQGYVLDASPVKFTIDDTHQSLFVSKENTA--------IKGSVSLEKVDRDTKSLLADAEFELQDKDGNTLKTNLK--------------TDQKGKLTVAD---------------------LLPGEYQFVETKAPTGYILDTTPLKFKISTEALNV-------------------TVTKENTKKPEIPKVPVPPKKPEKPDKIISEDSKQTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 534
13 -43.600IDP06530 surface protein [Enterococcus faecium DO] AFK59398 [Enterococcus faecium DO]  ali follow..  15  2..........................................................................................................................................................................................................................TGFDENTGVALYDPAESAL---TFTTDTEGSISVNGLIDGNYTLVETKAPDGYQLTNPQKETTFIVKNGKLQQTTGIIHGADEANVQNYGDFHFIKQDVNTQEKLADAEFSILRAKDPTVKLMKKIANLASGEYPYAWSDEVTGS-------DWEEVKLISDSEGKFSIEGLKQGAYCLQETKAPEGYALPKNEAAYTE----------FTVDDDPTTSDETTIDNQPKGILPSTGGMGIIVFILV-------GTALVGGAVIYFKKRHQETEA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 271
14 -30.900IDP06516 von Willebrand factor, type A [Enterococcus faecium DO] EAN10603 [Enterococcus faecium DO]  ali follow..  12  636...................................................................RIKYQVKLDAGAQDGNFCTVNNMAYIQNLEDYENDITTGRYEHKGRNFQVSKKGQNGEPLAGVEFALYDQNGEAEPIETSKTTTDGIAIFETKVSDIFWIREIAGPPRYQLVDETYQFQIKKYAANEDEMLGHYELVDEYTSNINKLIEGSNMPINGAEFELYEESQNPEGFKEPDENDTWILRLYDNAIGTIQLKQTGEENWQYLT-----YTTDEEDRLWVAFTAYNTFDYREIRVRKLDHE--------GHTLDGAGFDIRKVGDSSFPLYRAYTGNPLEPEESKRLPGIG------YFYSRAVGVEKYVDLNYDQPLHLSIGEYEVSESVAPNGYRLSDQVFQFALNEEGKFIIEDTVIEDETAPEIIDGVLQVTLEDELAPIDLELLKIDSMNSR-------RLEGAEFSIEKQNSAG------EYEIIEGGLAPDPNDSS--LFNASDLLEGVYRIKEVKSPDSYRKLPGYFILEISYREEPDIENDRVVPGKEAGTLKVEISYYPNEEAETPDLQQELEYELLETNRIRLQLSVGNDPENPLPATGGSGRL..................................................................................................................................................................................................................................................................................................................................................................................................... 1315
15 -29.400IDP05117 putative collagen-binding protein [Clostridium difficile 630] CD2831 [Peptoclostridium difficile 630]  ali follow..  17  719.......................................................................................................................................................................................QINGSSPPGVETTKQGYAFEAKK-------VDALDKNVLSGAKFNLE-DAFGNIVVKDLVSDEDGIIQSSVKNPGTYYLVEIMAPRGYEKLKDKIKVEIGNKDIGRIVDIGNIENIR.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 827
16 -28.000IDP06520 gene: ebpCfm; pilus subunit protein EbpCfm (Fms9) [Enterococcus faecium DO] AFK59016 [Enterococcus faecium DO]  ali follow..  1MKNH-KKINVMLGVLFLILPLLTKVFAEETAAQVILHKKKMTDLPDPLIQNSGKEMSEFDQYQGLAD-ISFSV---------YNVTQEFYAQRDKGASVDAAKQ-----------------------------AVQSLTPGTPVASGTTDADGNVTKQNGKDAVYTIKEEPKDGVSAAANMVLAFPVYEMIKQADGSYKYGTE-NDGTLKVTKIGTAENEALNGAEFIISKEEGTGNNDFAEASIEKGQLIVNHLEVGKYNLEEVKAPDNAEMIEKQTITPFEILANSQTPVEKTIKNDTSKVDKTTPQLNGKDVAIGEK-----IQYEISVN----IPLGIADKEGTQNKYTTFKLIDTHDAALTFDNDSSGTYAYALYDGNKEIDPV---DGFTVSVDPNYIPSLTPGGTLKFVYYMHLNEKADPTKGFSNQANVDNGHTNDQTPPSDVVTGGKRFVKVDGDVTSDQ-----TLAGAEFVVRDQDSDTAKYLSIDVSAKESATVFTTTSNG--LIDVTGLKYGTYYLEETKAPEKYVPLTNRVAFTIDEQSYVTAGQLISPEKIPNK............................................................................................................................................................................................................................................................................................................................................................................................................................................................. 586
17 -27.500IDP06539 gene: fms13; LPXTG family cell surface protein Fms13 [Enterococcus faecium DO] AFK58158 [Enterococcus faecium DO]  ali follow..  11  25.......................................................................................................................................................................................NGKLVKAEEVAQKPSEVTITLHKKGFSSVPEERPNSENIPGVDFDLFDLKYRLTSIDKQTTNEAGEAVFSTVQ-KVYLFLETYSPAHISRIASPMVVMMPVMMPTDVHLYPKNEIREADKQMNVEESDLRQVTIINEAGEQETISYIDLERGKTASYTITAPIPYFIDSVLENGSAVIKNYKITDTPTVGLTYYDQEIEVRAGETILTKGQYIVEVVSNGFVVTILTETYNLKVSTELEADDFHNNTAVIEIGRNDEFDYEEGVEPPEKTGGRKFEKYDASSSE-------LLKDARFELWNEDRSEYAADRIEWATSGQATEFVADGNG--YFEVQGLDYGTYQMKETMAPEGYVLPTGE-AAFTEFIISYGSYNEEIQIVGVENPGPERVPNMK................................................................................................................................................................................................................................................................................................................................................................................................................................................... 526
18 -27.100IDP92699 Ser-Asp rich fibrinogen/bone sialoprotein-binding protein SdrE [Staphylococcus aureus subsp. aureus USA300_TCH1516] YP_001574462 [Staphylococcus aureus subsp. aureus USA300_TCH1516]  ali follow..  17  624....................................................................................................................................................................................................................QGTDSKEKPMANVLVTLTYPDG---TTKSVRTDANGHYEFGGLKDGETYTVKFETPTGYLPTKVNGTTDGEKDSNGSSVTVKINGKDDMSLDT--EDTNKDGIQDANEPGIKDVKVTLKDSTGKVIGTTT---------------TDASGKYKF---------------------TDLDNGNYTV-EFETPAGYTPTVKNTTADDKDSNGLTTTGVIKDADNMTLDS-KTPKYSLGDYV---------YDSNKDGKQDSTEKGIKDVTVTLQNEKGE-------------VIGTTKTDENG--KYRFDNLDSGKYKVIFE-KPAGL............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 900
19 -27.000IDP06525 gene: fms17; LPXTG family cell surface protein Fms17 [Enterococcus faecium DO] AFK58157 [Enterococcus faecium DO]  ali follow..  11  1MKKLL-CLMLQLLVLLPLAAVLLPHAMSAEESGEDVVEFVLHKRMIRDIDYNDQFEYHENDGLAISEEAG--IISQTVPLNGATFAI----YDMTDYYHEKKAAENMTPKEFVQQIAETNRNNIRQLITEERLVQIGTSVTTGKDTVGGLGDGIARIKQDRDAVYLIFEESIDPEVGLDVDIDQTAIPIAAILKNVGYLRDPYFFKYGRQ--RGTTEKGKPLEGAVFALYQMIEGDKNVSKFISDKEGLVTTGQLPSGTYYFEELKGVEGYEMDEASKRIEVIIPEFWVDAKGQPQYVVVNGQEMAELESGKVPVSAYESATPRVYNETVKETTDKPKEPSGPSNPGQSGKWSVFPQTNEARTL.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 412
20 -25.900IDP91037 gene: sdrD; Ser-Asp rich fibrinogen-binding, bone sialoprotein-binding protein [Staphylococcus aureus subsp. aureus Mu3] SAHV_0560 [Staphylococcus aureus subsp. aureus Mu3]  ali follow..  11  596..................................................................................................................................VTVTVFDNNTNTKVGEAVTKEDGSYLIPNLPNGDYRVEFSNLPKGYEVTPSKQGNNEELDSNGLSSVITVNGKDNLSDTNKNGIQDQDEKGISGVTVTLKDENG--NVLKTVTTDADGKYKFTDLDNGNYKVEFT-TPEGYTPTTVTSGSDIEKDSNGLTTTGVINGADNMTLDSG--DTNKDGKQDSTEKGISGVTVTLKNENGEVLQ---------------TTKTDKDGKYQF---------------------TGLENGTYKVEFE-TPSGYTPTQVG-DEGIDSNGTSTTGVIKDKDNDTIDSGFYKPTYNLGDYV---------EDTNKNGVQDKDEKGISGVTVTLKDEND-------------KVLKTVTTDENG--KYQFTDLNNGTYKV-EFETPSGYTPTSVTSGNDTEKDSNGLTTTGVIKDADNMTLDSGDSNKDGKQDSTEKGIKDVKVILLNEKGEVIGTTKTDENGKYRF-DNLDSGKYKVIFEKPTG-------------------------------------------------------------TQTGTNTTEDDKDADGGEVDVTITDHDDFTLDNGYYEEETSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS---------------DSDSDSDSDSDSDSDDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS------DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDAGKHTPVKPMSTTKDHHNKAKALPETGNENSGSNNATLFGGLFAALGSLLLF---RRKKQNK. 1385
21 -25.600IDP01916 hypothetical protein lmo0327 [Listeria monocytogenes EGD-e] lmo0327 [Listeria monocytogenes EGD-e]  ali follow..  10  338...............................................................ILNGKDGDPYTTTQKTFPGYTLVATPANQNGAFTLNPATVNYVYSANDYKLTSTFKDAQGQELKAPVVDTKDYHIQDNYTTTAATIPGYSLVSTPANQNGTFGAGNVTVNYVYKKDDYTLTSTYKDTNGQ----ELKAPVVDATTYHYQDTYTTTAAVFPGYTLVATPTNATGTFGSSNITDQQGKYTTTAKTIPGYTLVTTPTNNQGNFGTSDITVDYAEDYTLTSTYKDAQGKELKQPVVDSKKYHIQDNYSTSAATIPGYTLV-ANETGTFHTSDVTVN-KLTDLKLTSTYKDAQGTELKPPVVDSKTYHIQDNYATTAAV-------YTLVATPANQSGTFGSTDIQVNYVYQAVAYKLTSTYKDQQGNDLALPKDGYTTSDIAIPG-YTLVAAPTNQTGTFGASDVTVNTLTSTYKDAQGKELKTPVIDSQKYHINDTYTTTGPGYTLVAAPANQSGTFGAANVTVNYVYKADDYTLTSTYKDANGKELKAPVVDSKTYHTKDNYSTSAATIPGYTLVAAPANQTGTFNTSNVTVNYFYKANEYTLTSTFKNVQGTELKPAIVKKGFIIKDGYSTSGVTIPGYTLVATPSNKKGTFGASNVTVNYVYKANGYALITTYKDTQGKDLKPLAIDTKTYNINDPYTATALNIPGYTLTTTANEKGVFGASDETVNYVYKANDYTLTTTYKDANGKELQAPKVDAKTYHIQDTYKTTAAVIPGYTLVAIPKNDQGTFGANNVTVNYVYQTNDYTLTATFKDAQGNELKATEVDAQKYHIHDTYTSKAAVIPGYTGTFNASDIQV--NYVYKANDYQLTSQGNEIALP---TVDAKTYHIHEAYTTKARLIPGYSLVAAPKNQIGAFGTSDVTVNYVYKKDAIIKPITPAKPTILTIKTPASKVIKTKVVKQTLPKTGDDDAGLLNLLRLIGLVLILGVFLAVGSKKLR.. 1348
22 -24.100IDP92687 Ser-Asp rich fibrinogen/bone sialoprotein-binding protein SdrE [Staphylococcus aureus subsp. aureus str. Newman] YP_001331559 [Staphylococcus aureus subsp. aureus str. Newman]  ali follow..  12  648................................................................................................................................................KSVRTDANGHYEFGGLKDGETYTVKFETPTGYLPTKVNGTTDGEKDSNGSSKEPKYNL----EDTNKDGIQDANEPGIKDVKVTLKDSTG--KVIGTTTTDASGKYKFTDLDNGNYTV-EFETPAGYTPTVK----DKDSNGLTTTGVIKDADNMTLDRGFYKTDSNKDGKQDSTEKGIKDVTVTLQNEKGEVIGTTK---------------TDENGKYRFDN---------------------LDSGKYKV-IFEKPAGLTQTVTNTTEDDKDADGGEVDVTITDHDDFTLDNGYFEEDTSDSDS---------SDSDSDSDSDSDSDSDSDSDSDSDSDSD----------SDSDSDSDSDSDSDS--DSDSDSDSDSDSDSDSDSDSD.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 1010
23 -16.800IDP06529 gene: acm; collagen-binding MSCRAMM Acm (Fms8) [Enterococcus faecium DO] AFK59905 [Enterococcus faecium DO]  ali follow..  10  1MKKCRNIIL-SMLFIITNITSLIPVHVYADAGRDISSNVTSLTVDPTNITDGGNIKSFDEKKQNIQPGDYLWIN-----PSEGNIRGEGFQKEIPLMIENKNVGTLTVRKDSAQVVFNENIKNLDSVEGWGQFEIQARNVTDTGEENTGPFT-NINNNGTYVEQPVKISDEIQSGQRLDPSTFEIESFNHTVKNISASGGVNGTVRGELKIFKYINDTEIGIPNVTFELRRADEQPQSSILLTSNEQGEASIKGLQVGDYVVKEKEAPNWIDFDPNELKFSINENDTEGVSLPIYNKKKVTNITATKIWNGGTTPRPSIYFKLF-RASTNNWEPVPDAETKRLDNGITSVTWEDIQQYDDSGN------------------------------TFKVQEVDQN-GN-------DYVPSGYQKIENGLVVTNENKEVI-----------------SVSGQKTWEDNENQDGKRPTTIT------------------NLLADGQPIQHKEVSEKDDWRYRFTNLP--IYTVTEDNVPDGYNIKNSYTPEKTNISIPGSHITPWKNFPEKTEREKIRNLFSQKLQIFAHTGESSEQRSNYISKRAVPKQITNKSKSILPKTSSKKS....................................................................................................................................................................................................................................................................................................................................................................................................... 696
24 -16.600IDP91521 C2 domain-containing protein [Toxoplasma gondii ME49] TGME49_040910 [Toxoplasma gondii ME49]  ali follow..  1233..............................................................................................................................................................................................................................RSAFFSL---------AVMLYNLPGELVSTYVYICVTQKVTERERRRILAQKEKQSREDAQRKARKQRRKAGHEGADNGAEDKQGAEGNEEEHGDAAAAAVAEES----VSAEAVQGDEEPKKVVKKGAVPRVKKRSYDQVEGTEVAAIAIERDFFTEAEAPDFKNLMS------VEHAINTHLGLSPGRVRAFQARYAEKRIVFAVGPPMDDATEADAVSSVALMEKLRDILPSMAHEEGRFQEVTGGGATL-RIAQEQATAGEGEQQTSEGIPTRDMQVDGTAVLEEAGEKSDKKKKKKEKKEKKEKKEKKEKKEKKEKKKKKGGETAAEPEEASAVLAPPPVPVPAAAIPSVLLPADSEDGEKEQPKEKKKEKKEKKKKKDGETDAEPEEASAVLAPPPVPVPAAAIPSILLPTDGEDGEKEKTKEKKTEKKKEKHTEKKHKKKSEALPESETTAVVTVTPGEEDETSPLVPVPSSIASSEAPEPPASTRVTPAPEPKAKPGLSMGAALLAVRARSRLQRKHLAQQLSSSSSSEVSASSASSLSPSSSSSSDFAETRAKADALRARLQAAQARLAAARETEVSSSETESSETSEASFLSSDGEWDALWQSQRAAAMERQQRLQKMVSGVKAAYRRLEEENTRLAATRRRDDKLQRQVEAERERAVELLKEATRAKEEKDLIARQPPPARDWSDTVVLSTPQIFVNSQAACAPFADSGRDEGGRDEWYEVSDACSRRAESSNESRTTAGAKLRQQQLD-------LAGRT.................... 1990
25 -15.900IDP05657 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo0175 [Listeria monocytogenes EGD-e]  ali follow..  15  236............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................SVNVQATDKAGNVSNTLNVTVHVSTTVNHLD-SNGNK-TLTGVVNSNYQSESKKITGYTLET----TPTNATGTFT----------DTPQTVDY--IYKKDTVTPTPITVNPVE-VNPVVNKPVTVKPANDNTNPSTSNSVEKTTYSSLPTTGDTDQSKSSTIFGALLLLISAPLLLFKKK..... 415
26 -15.800IDP05555 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo1413 [Listeria monocytogenes EGD-e]  ali follow..  16  226.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................PTETLSGKIGTTFQAEVKEIDGYELSQVPSNQSGTYTDQTQSVIFKYKKITTPDE-----VAKDVTVTYKDTKGN---------QLADPVILKG-DIGSTFETE----------AKSFKGYKLTK----TPSNHSSVFT----------SDSQEVEY--VYSKDDAVITPPVTPVNPDKPIINPVKPVNPATSTVPNKNISKKGKTSTALQLPKTGDSENNLPLIIGVSLLISGVYIF--TTRRKRVK. 439
27 -14.800IDP02799 hypothetical protein GBAA4787 [Bacillus anthracis str. `Ames Ancestor`] GBAA4787 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  10  21..................................................................................................................................................................................................................................................TLQPLAVQAATKLADGEYSIDEESMMNQYS--VSPGTLKVKDGKKVSFTLTNSSWITKFETEKAGKLVATNVISEDKEKDTRVVEFDVEDVEKVLNAKDQNSITPIHVEQPNEKEDPANKPDPNEKPDPSQKPDQKPDPDQQPNSNTIKDGEYSIPEESKMNTYMIENGKKKAIVTLKSSSLIKNFQTEKDGAFVDAKVVSENKEKDKKLNTKVFIEMASRNYKQTHD--QLLFEQDKLEQIKNEEKQPEVEKPEVEKPEVEKPEVEKPDENKKTDAETIKDGEYSINEISMMNTYTKSPGL---LKVKDGKKYVSFTLTNSSWITKFEFSFVDANVISEDKKADTRVVEVAVDDLSKKLNAKVKVDIDSMNYHHFYDIQFAFDKGSIKPLDNQGGNDNQGGNNNQGGNNNHDDNKTIDPNALKDGEYSIGFKVLKDKTEEISMMNTYTKNP----------------GVLKVKDGKKYVSFTLTNSSWITKFEFEKNGAFVDAKV---LGTNKEQDTRVVEVEVADLSKKLNAKVKVDIDSMN------YHHFYDIQFAFDKGSIKSLGNQGGDTNQDGNGNQGGNDNQGGSNNQDDNNNQDGTNNLNENPTVDPKNLKDGQYDIAFKVLKDKTEEISMMNQ--VVSPARLTVKDGKKYIAMTLKVSEDKAANTRVVEFE-----NDLFAKLNAKVKVDIDHHFYDVQIPDFNRNADGKKKNEATNNDAKKEKNSKTADTAQLGLYM----VLLLGSLALLVRKYRAGR.. 884
28 -14.000IDP05371 conserved repeat domain protein [Bacillus anthracis str. Ames] BA_3601 [Bacillus anthracis str. Ames]  ali follow..  10  297...................................................................................................................................................................GWDITNVDASSSLVNNQTSATVRFVTNGDGYAAAGFGVQIDATGPIINPVKSVNRTVAGVGLTYTIVPNTGTGSAENVVLRDSNGTTNLGTIPNNTFQVRITSFPNPNPIPNRAMVSYQFRPFVGSPLITSMSSSNTVQTTVNQATISMQKSVDLQTAT-LNLTYTV------------NVTNNGNVTANNVIFVDS-------TFVANSVIVNGVARPGANPASSINLGSINASQTTV---------RFQVRVTSNPLVNPIPNRASATFTFTPVPGQQPVSGQATSNTVVTTINIADIRTRKIVDRAFATVNDVTYTVTIENTGNVLATNVVFQSVTVDGVSQPGANPATGFTVANISPGQVRVTSTPSGGTIPNRGNVTANFVVIPNQPPITINRQTNTVVTQVNTGGLNVIKEVNTTQAVVGDTTIAVQNTGNVPLTNVFFQDA---VSFVANSVTINGVPQSGLNPNTGFSLPNIPAAQTVVVTFDVLIIQDPENEDILNQANVTASFQVNPSEPPVTINVPSNIVNTTVQSGNFEVVKSVNTDVATVGDVLVYTIEIINAGSVPATNVFFQDSIPQSVFVNGVLQEGADPELGFPLNDLPTGASVIVTFEVLIDEIPLGNNVVNSANVTGDFLVN---------------------PTEPPITVTEPSNTVMTVVNSSGLNVIKSVSATEAGVGDTYTVR-----------IQNSGTVAATNVSFLDPIPSGTTFVANSVIINNIPVGGMVTVAFQVTITSVPPNRVLPNNANVPLQPPITIVTISNIVVTRVNVGSLNVMKSVNTLQAGVGDTLTYTILI........................ 1158
29 -13.800IDP05561 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo2026 [Listeria monocytogenes EGD-e]  ali follow..  16  346..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................SGNEGDAYASTPKTIDGYTLTQTPTNAQGTFTEEPQTVITKNSVAAAPVTVKYLNEEGKILTASDNLTG----------NVDDPYQTKAKE--AGYTLDESKLPTNASGVFKTNAQTVTWSAKDNFDSAVDSLGVAVPFDEVKVDGSVDTTKAGVYPVTYSFAGDSVTAPANPNTPSTQQTPTKQSGTLKIKATHQEQPIVAGNLKLPTTGDNLWDSVLYSIFGFITVCLSFVLFFRLKKQKNS 626
30 -12.800IDP05461 conserved repeat domain protein [Bacillus anthracis str. Ames] BA_1618 [Bacillus anthracis str. Ames]  ali follow..  1126.........................................................................................................................................................................................ETSLSNTVSTQINLANVVIVKQVDLTIADVGQP------ITYTIALANPGNTPANNVVTDIPGGLQVGTIPAGVFQIGANSLPSPNPVQNSAVLQYNFIADPNSPPVVRNSASNIVTTQINTANIVATKLTSTNFADVGDITYAT------------ILTNNGNIPASNVTFTDI--IFLPNTVTINGVPIANANPANGILIGTIGANAFQVFVPTIPSANPIANQSSTTFQYTYDPSKPAVMQMVASNTVQTTINNATITSVKSADKQFANVNDIITYTTTLTNNGNTLASNIVFTDAIPSGTSFIPNSVTVNGTT-----LSNANPANGIAIDPINPNQVQVNSIPNPNPIPNQSNTTYQYVVNPNLPPASSNTLSNVITTQINNATIIATKSVNTPNAAIGDVTYTIAVTNTGNIPASATVLTDGLGPGASFIPNSVTINNVSQPGLDPSLGDDISPEGTTFITFQVKILAIPPSGTLTNNALVNYEYTVNPTETPAVGSTVTNTTVTPIVDATLVINKNASTTFATIGDTITFTSVVTNTGNTTANNIVFTDSI-----------NGTTFVPNSFKINGVTVPNTNPQNSINIGNLNANASVTLSFQVNITTLPNPNPIPNQSSLQYRFIV----DINEPPVSRTVQSNKTFTQVNSASVIATKTASSAFAAVGDTYTTT-----------LTNSGNTTANTPVFIDILPAELSFVPDSVQINT-VGGTIISFQAIVGSNPTLNQSSTTYSIIVDPVTEIATSNPTLIQINEAIIQATKSVDRLFSDVAPGNSFLTYTVLLTATNIIFTDPI............. 1977
31 -12.600IDP05002 hypothetical protein lmo0086 [Listeria monocytogenes EGD-e] lmo0086 [Listeria monocytogenes EGD-e]  ali follow..  11  1MKKILVVIIVSVLAISAIVSAFFLM------------------------------------------DDAYAIETE-----GFTYSPKGKVVDFSSEAK-------YNDTWINNEKTITDKKEMKPINLARTLFLKDGRIQFLGKSVAVKSASD------------LIELPSKTSITESKGSYKAKSDSNKTLAQLPKGTVVKLA-----------EGRYIILDNAYLKNKQGLNKKLPKNVSIDENKKVML----MGDKTIEELGGDDAYIMENNHYHFDLK--KEMLVSQTAKETDIDIRSIKVEIDDNAEKRSLKTAKETEKETTKDSTEKESEKQSNDASGQKSAQNNERSESKDDQTQDASGNNTNGSANNNTARSNGTGGSNS--------TNGSQPGGTQNKPNEGDVNKANEIIKKLNEAENTNTFQV-------------PIVDVNLTVKGQVAAAKLKLTDSSKRLNSLEAILYDSKNNIVKKESTKANQNFTFNNLKYGETYQVVVQ------GSYKSASNKNQDTIFFRQT---------EAKPVVLTPKVTERGED----YMKAELTATELYGHIDKLVLKIKENNSNVITSQKVTVD---------------ASQLTKDGQVEVKFNSLSSDKEYIIEMEELIVDGKNVTDDGWYFISSTLKAKPTIEGLNLSYSTDKGEFVASPVNLVDRDESITSIRYVAYLEDDYKVN---SNAKEYAYSVVDANQKKTAVKVGRTVDMNDGNYIFVGYISGNNGQSDYTFATPASNSVVVGKKTKPTVEFSLKEAEQDKLTINYEVFDADNTLLFDNLTHPTLKLYKSDAQGATVDLTKKSDITNLLEFDGLESEAYYVVV---YNLDDGAGIMVD-ELIGQSSVFRTTTTKVAINVKLSDAAVNLNDANLKIYEK--KTNTLVKTVPLHGDFEMSDSGNSYLFENLSINKEYL--KVEDGYDSGMNHVPVEGQ................................ 873
32 -12.300IDP05488 putative LPXTG-motif cell wall anchor domain protein [Bacillus anthracis str. Ames] BA_4789 [Bacillus anthracis str. Ames]  ali follow..  16  21................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................LVMPYGNASAKLADG-TYDINYVIQKAENDSASMAND--FEKPAKLIVKNGEMRVQVPMNVSKDESADKRTVEFK---NGVAATTKNNDQAKTDTQVKEEKTKVESKETAKEVNKETKNENGKAEKTDNPKTGDEARIGLFAA--LILISGVFLIRKVKLSK.... 237
33 -11.500IDP91912 hypothetical protein SpneCM_07064 [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100007064 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  11  313.....................................................................................................................................................................................................QLPSLTVKKILEGEQSPNKS--------TINVTLSDKDGKPINQISLKNSQETALSYLPRDHYKVEEVENSRGYHVTYEKQEGTLSEDVQTIVT-----NHRLPTLSVTKK---------TGAFANLLQSFKITINVKDAQNKPLNGSYSAIVNNQKTTLQFTNGKATVDLKKDKTIKILD-----------LPLNRYSIEEEASSRGYQVSYDKKEGTLDANKSATVTNNK......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 530
34 -11.400IDP01769 putative inner membrane lipoprotein [Salmonella typhimurium LT2] STM2532 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  288.........................................................................................................................................................................................................AHRYHNRLDIFTQSLENGAAQSGIEIVLLNDKG--QTLAQATSDAQGHVQLEADKAAALLLARKEEQTTLLLDLSEFNVA-PGYSKQFFMFGPRDLYRPGETVILNGLLRDSDGKTLPDQPVK---LEVVKPDGQVMRTVVS--------------QPENGLYRLNYPLDINAPTGLWHVRANTGDNLLRSWDFHVED------FMPERMALNLTAQKTPLAPADEVKFSVVGY---------APANGNTLQGQLFLRPLRDAVAA--------LPGFQFGNIAEENLSRSLD---------EVQLTLDKGGRGEVSAA--PLQVILQASLLESGGRPVTRRVEQAI--KAVYDYRTDTTVNQPIVDEDSNAAFDIVYANA-QGEKKAVSGLQVRLIRERRDYYWNWSESEGWQS-------QFDQKDLVEGEQTLDLNADETGKVSFPVEWGAYRLEVKAPNETVSSVRFWAGY-------------------------------QDNSDGSGAARPDRVTLKLDKANYRPGDTMKLHIAAPVAGKGYAMVESSDGPLWWQAIDVPAQGLELTIPVDKTWNR----STLVVRPGDKSRSATPKRAVGRRLDLALESPAKMRPNQPLTVRVKASVKHGEMPKQINVLVSAVDSLNITDYAT-DIYDIYGQVIEGQGRLAALRFGNHVNIIAQQAQ-NEQGEGVVTLPIG--DFNGERVMA---------------QAWTADFGRGESKVVVAAP------------------ELNMPRGGDVSRLVLDVLNIALAASGLLELLSQQPQPVN.. 1066
35 -11.300IDP91038 hypothetical protein SAHV_2481 [Staphylococcus aureus subsp. aureus Mu3] SAHV_2481 [Staphylococcus aureus subsp. aureus Mu3]  ali follow..  1MRDKIRKFTVGTASILIGSLMYLGTQQEAEAAENNIENPTTLKDNVQSKEVKIEEVTNKDTAPQGVEAKS-----EVTSNKDTIEHEASVKAEDISKKEDTPKEVANVAEVQPKSSVTHNAEAPKVRKARSVDEGSFDITRDSKNVVESTPITIQGKEHFEGYGSVDIQKNPTDLGVSEVTRFNVGNESNGLIGALQLKNKIDFSKDKVRVANNHQSNTTGADGWGFLFSKGNAEE-------YLTNG---------GILGDKGLVNSGGFKIDTRGYGAFVKNDSSGNSQMVGENIDKSKTNFLNYADNSTNTSDGKHGQRLNDVILTYVASTGKMRETSITDLGLSKNQAYNFLITSSQRWGLNQGINANGWMRTDLKGSEEKKVEEIPFKKERKFNPDLAPG----TEKVTREGQKGEKTITTPTLKNPLTGEIISKGESKEEITKDPINELTEYGPETIAPGHRDEFDPKLPTGEKEEVPGKPGIKNPETGDVVRPPVDSVTKYGPVKGDSIVEKEEIPFEKERKFNPDLAPG-----TEKVTREGQKGEKTITTPTLKNPLTGEIISKGESKEEITKDPINELTEYG-DVVRPPVDSVTKYGPVKGDSIVEKEEIPFKKERKFNPDLAPGTEKVTREGQKGEKTITTPTLKNPLTGEIISKGESKEEITKDPINELTEYGPETITPGHRDEFDPKLPTGEKEEVPGKPGIKNPETGDVVRPPVDSVTKYGPVKGDSIVEKEEIEKERKFNPDLAPGTEKVTREGQKGEKTITTPTLKNPLTGEIISKGESKEEITKDPVNELTEF-NLPTDQTEKVPGKPGIKNPDTGKVIEEPVDDVIKHGPKTGTPETKTVEIPFETKREFNPKL--QPGEERVKQEGKTITTPITVNPLTGEKVGEGQPTEEITKQPVDKIV--PTHPSGPVNPNNPGLSKDRAKPNGPVHSMDKNDKVKKSKIAKESVANQEKKRAELPKTGLESTQKGLIFSSIIGIAGLMLLA--RRRKN... 1115
36 -11.200IDP05663 hypothetical protein lmo0333 [Listeria monocytogenes EGD-e] lmo0333 [Listeria monocytogenes EGD-e]  ali follow..  11 1045....................................................................................................................................................................................................................................LDDIDADTNDGSIVTSNFATAVNLDKA--GDYTVTNSINSDGVAGTPTAIIVHVEKEKIATISTN--------------------------------TAQQYEKYAKINETQFLKDVHASINASPTTAVLESDFETVVKLDVPGTYTVTITATNEDGGVSAPKEVSVIVRKIPAPE--ITADKEITYPKFDEVSEAEFLNDIHATISDKNVAITSNFSTDNLNKAGDYTVTLNATNEDATPVEVIVHVQQGERPVITADATISYDKFANITEAKFLEDIHATSSSNFQTATNFKTAMSYTVTLNAVNDGISAEPVAVTVTINKEPAAALKADAEVSYAKNEAVTESDFFKDVHLEGTE---------------------------APSTAKATSNFDSVVDRSKTGDYTVTINATNEDGAVSTPIEVIVHIEAESAPVITANAEVKYNKHEQTDERRFLYDSEAKIDEANVEIKTDFAEKVDINKV----TLTATNEDGQAANPVEVSVIVSDAAAEKVNVKYVDENGSEISAAETLTGNLDE-----TFSIDAKSIAGYKC-------------DATLSGVFSTVEQTVVFHYKAIKPGVVTIKYEDTNGKA----DEDKQITGEV-------GDDFTVSGYSCRAIASGKITEEPQTITFTYS---TATPSKKSGEITVQYVDESGKKLKKVTGNIDDSYSVEAKAIEGYSVFTEKSQTVTFDPKVKGKTNQPSSTDTKLKVDNNSLPATGDTEN---VLIGFNMLIVASIFLF--RKPKTNQ. 1778
37 -10.200IDP05698 hypothetical protein lmo2186 [Listeria monocytogenes EGD-e] lmo2186 [Listeria monocytogenes EGD-e]  ali follow..  12  18................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................FLSTGLTAQAALKDG-TYSVDYTVIQGDSDSASMAND--FDKPATVTVN--GGKSTVSLQVNHSKWITGLWVEGNAVSVTSKNASSDTRKVSFPVSTLSNPVNAKAVKSSDNNTTTPATKSDSSNKVTNPKSSDSSQMFLYGIIFVATGAGLILLKRRAIFK.... 207
38 -10.000IDP06509 gene: fms20; LPXTG family cell surface protein Fms20 [Enterococcus faecium DO] AFK60478 [Enterococcus faecium DO]  ali follow..  15  352................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................EKTGVDKNGNNVNDKMLQVGDTIQYDLLAVYDRFELIDNLVNYVDAHVESGTNKKFDVSGEVTYDKTKHQVKYAAK-NRMKYNGETYVKVNELANQNSVAKNQGTSIINKVEKDTNIITVYFPKIPVKEVQQNRNDGKKGTPTAPLNAGSEVQYL........................... 535
39 -9.960CPX_91689_91672 Complex of C4BPA_HUMAN with ARP4_STRPY [Undefined organism]  ali follow..  12  838..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................DKQISDASRQGLSRDLEASREAKK----VEADLAEAKLQALEKLNKELEEGKKLSEKEKAELQARLEAEAKALKEQLA-------KQAEELAKLKNQTPNAKVAPQANRSRSAMT----------------------QQKRTLPSTGETANFFTAAAATVMVSAGMLAL-----KRKEEN 984
40 -9.920IDP05082 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo2179 [Listeria monocytogenes EGD-e]  ali follow..  2.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................NHLKKLVSILICTLLIVSLLPFSVWADSQERDGTDVEEITTKEKVTQETTSNETTSEPLKGTTVNKAINAKSFPTGNYSGDFSINSQKDVIESGQTYNIY-----KITGPNTRYQNAKLVKNGEFTPSYNKTTRQLVYTYQT---SGVVDVILKMTTKNGYTPNGTKLVVTGELSADNLSEKVTEQAETTVNATATTALSNDNSINNNPSQGDIGIWSFMEEGKKIVIEYTL............. 265
41 -9.890IDP91950 beta-N-acetylhexosaminidase [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100006639 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  14 1058....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ANVETRPELITRTEEIPFEVIKKENPNLPAGQENIITAGVKGERTHYISVLTENGKTTETVLDSQVTKEVINQVVEVGAPVTHKGDESGLAPTT-KEEIPFTTVTRENPLLLKGKTQVITKG----VNGRSNFYSVSTSADGKEVKTLVNSVVAQEAVT--QIVEVGTMVTHVGDENGQAAIAEEKPKLEIPSQPAPSTAPAEESKALPQDPAPVVIEKKLPETGTHDSAGLVVAG----LMATLAAYGLTKRKED.. 1312
42 -9.830IDP02817 hypothetical protein lmo2185 [Listeria monocytogenes EGD-e] lmo2185 [Listeria monocytogenes EGD-e]  ali follow..  11  18.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................IFQLIPGFASAADSRLKDGGEYQVKESSEADKYIDHTAT---IKVENGQPYMYLT-----ITNSTWWQTMAVSKNGTRPEKPAQADVYQDRYEDVQTVSTDAAKDT--------------RVEKFKLSSLDDVIFSYMHIKVDAISYDHWYQVDLTIDPSTFKVISEPAVTTPVTLSDGIYTIPFVAKKANDDSNSSMQNYFNNPAWLKVKNGKKMVAMTVNDNKTVTALKTTLAGTLQDVKV---VSEDKDANTRIVEFEVEDLNQPLAAHVNYEAPFNGSVYKGQADFRYVFDTAKATAASSYPGSDETPPVVNPGETNPPVTKPDPGTTNPPVTTPPTTPSKPAVVDPKNLLNNH-TYSIDFDVFKDGTTETSMMES--VMKPALIKVENNQPYVYLTLTVSGDINKNTRTVKYP-----KDGTANTDVKTHVLIEDHEYTVQVKPKLAKPDFDDTNSVQKTASKTEKNAKTNDSSSMVWYIT----LFGASFLYLAYRLKRKRLS 569
43 -9.540IDP05755 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo0732 [Listeria monocytogenes EGD-e]  ali follow..  15  366..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................DKYELDTEQMPTNGLGTLSSEAQTVTYVYKKVNGAP-------VTVKYEDQNGVEIDVLTGKLDATYQSKAKEIAGFTLDNSKLPANASGIFETNPQTVTYVYQAVPATIKAHDSTI--YVEDKWSAEDNFDSAVNSVGAAVSFDDLEVEGKAGVYPVTYSFAGE--SVTINVTVKAKDLPAPPVTPTKPVVPIQPTNPDQPDIQAAPGEHQAST----DKSEALKVTVAQKEQPTVAGNLKLPTTGDNLWDSVLYSVFGLIAVCVAFSLFFWRKKQKHS 638
44 -9.510IDP05200 pepdidoglycan bound protein [Listeria monocytogenes EGD-e] lmo2714 [Listeria monocytogenes EGD-e]  ali follow..  11  30.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ENGNNSTPTEEKTTDTTENIITEEKTEPAEPTKDTTVTPPQKSKVQTTIDITDSQEVYSYEQNSKIDLKDFTATLTDYTDTKLTNYRLAANSKLSTAQTGIQEVTLLGDNEDGKTTAVKLNYLVKEKTAQLTITDMNFDLETKIFTGKTKPFASVYMSSPADENFGEGTTTADKDGTTPKQITAYAFDESGNYSEEVTYQVPAKKQNEKVKKIETKNAVKSATTKPTDVTKVTKDDKTDLPSTGDKGTEWIFVVAGVIVILVAVLLLRKRKK..... 315
45 -9.060IDP91913 cell wall surface anchor family protein [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100006539 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  11  16................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGDGTATIVFTIPGNQLVAQDPKAQDSTKPTAEKSTVKAPAQRVDVKDITHLTDEEKVKVAILQANGSALDGATINVAGDGTA--TITFPD---GSVVTILGTVQQSAKGESVTQEATPEYKLETTPGGDKGGNTGSS-EIKGAPLSDKEKAELLARVEAEKQAALKEIENAKTMEDVKEAET-TTSAPQATAGTMQDVTYQSPAGKQLPNTGSASSAALASLGLVVATSGFALL---RKTRRRK. 334
46 -9.010IDP05699 hypothetical protein lmo2396 [Listeria monocytogenes EGD-e] lmo2396 [Listeria monocytogenes EGD-e]  ali follow..  13  602.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................DADGNELATSDTLNGKIDAPYQTTAKSLSGWTVKTTPNNATGVFTNSKQTVTYVYEKADGAPVTVKYVDADGNELATSDTLNGKIDAPYQTTAESLSGWTVKTTPNNATGVFTNSKQTVTVYEKADGAPVTVKYVDGDGNELATSDTLNGKIDAPYQTTAKSLSGWTVKTTPNNATGVFTNSVYEKADGAPVTVDGNELATPDTL-----NGKLDTSYAVTAKNLSGWKLTATPSNANGVFTTDAQTVTFVYAKQEDDPKKD-KTPIKINENKPTASKVTTIKRQTKLPKTGDTQQDSILFGLVGTCFVLLGIYSISKKNS.... 940

FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.