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Query: IDP05548 hypothetical protein lmo0409 [Listeria monocytogenes EGD-e] lmo0409 [Listeria monocytogenes EGD-e], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKSKNNYFKQITTIMTVVSLLIMVLGIQGNNDVKAAPQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISDLNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPLANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEENLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDTLLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTFEGWYDAEVGGTKWDFKTMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAGENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKALast
1 -114.000IDP05548 hypothetical protein lmo0409 [Listeria monocytogenes EGD-e] lmo0409 [Listeria monocytogenes EGD-e]  ali  100  1MKSKNNYFKQITTIMTVVSLLIMVLGIQGNNDVKAAPQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTKEELESISQLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSNISDLNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPLANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEENLIPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDTLLNEPTTPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTFEGWYDAEVGGTKWDFKTMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAGENTTELATAKLPKTGDNAPWKTLFAGILLSSSAFYIWRKKA 821
2 -78.600IDP05666 gene: inlA; internalin A [Listeria monocytogenes EGD-e] lmo0433 [Listeria monocytogenes EGD-e]  ali follow..  39  40...QDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSF-GNQVTDLKPLANLTTLERLDISSNK-VSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQP-------------------------------------------------------------------------LKAIFNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVAPPTTGGN----TPPTTNNGGNTTPPSANIPGSDTSNTSTGNSASTTEASLPTTGDSDNALYLLLGLLAVGTAMALTKKA. 796
3 -59.800IDP05663 hypothetical protein lmo0333 [Listeria monocytogenes EGD-e] lmo0333 [Listeria monocytogenes EGD-e]  ali follow..  24  372ITADSCAIEDLGTLNNLPKLQTLVLSDNELTNITAITDLPQLCGITSIGTLDNLPKLEKLDLKENQITSISEITDLPRLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINISNNVIRTVGKMTELPSLKEFYAQNNSISDISMIHDMPNLRKVDASNNL-ITNIGTFDNLPKLQSLDVHSNRITSTSVIHDLPSLETFNAQTNLITNIGTMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNNSYSLGTMDGVPKLRILDLQNNYLNYTSSLSDLTNLTELNLRNNVYDDISGLSTLSRLIYLNLDSNKIEDISALSNLTNLQELTLENNKIENISALSDLENLNKLVVSKNKIIDISPVANMVNRGAIVTASNQTYTLPTVL................................................................................................................................................................................................................................................................................................................................................................................................................................ 792
4 -58.600CPX_91662_05666 Complex of CADH1_HUMAN with INLA_LISMO [Undefined organism]  ali follow..  37  919ATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSF-GNQVTDLKPLANLTTLERLDISSNK-VSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDIT---------------------------------------------------------------NLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKA------------FNVKFHVDGKETTKEVEAGNLLTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKAGYTFKGWYDEKTDGKKWDFATDKMPANDITLYAQFTKNPVTPPTTNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDSDNALYLLLGLLAVGTAMALTKK.. 1678
5 -56.700IDP00005 internalin, putative BA_0552 [Bacillus anthracis str. Ames]  ali follow..  23  253VDLSFNKIENVEPLVNLEKLDILELQNNRIADVTPLSQLKKVNKISDIKPLYNVSSLRKLYVSNNKITDFTGIEQLNKLGTLGVGSNGLVNIEPISQMSGIVELNLEKNDIKDITSLSKLTGLQSLNLEENYVSDVSSLSNLINLYELKLATNEIRDIRPIQELGKRIKIDAQRQKVFLDEAYMNEEVKIPVYDVNGTALQNIEWLLTVKALKITDGKKEGITDFSGLEFMTNVEELTLQNVNMKNAEFISSLRNLKSVDLSYNQIEDIKPLHSLEDLEKLNVSDNGIKNVPELFKMQKLKTLDLSNNKLDNADGIHQLENLDALLVNNNEINNLDEISKVSKLNKLEMMSNKVRDISPLASLKNLQWLNLSDNKIQDISTLSSMLDLLSLKLAGNEIRDVRPVIQLAQWITVDIKNQKIVLE.............................................................................................................................................................................................................................................................................................................................................................................................................. 765
6 -52.600IDP02719 gene: inlG; internalin G [Listeria monocytogenes EGD-e] lmo0262 [Listeria monocytogenes EGD-e]  ali follow..  31  1.....................................................................................................................................................MKQRKTSVLHVLLVVTAILGISLWVN-------ASHGMKAQAESIAQPAPINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQITNITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPP-------------------------------------------------------------------------------------------TTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPIVEAPVNYITTFDVDGTTTTENVVVDTLITEPAEPTKEGYTFSGWYDAETGGNEWDFAVDKMPATNMTLYAQFTINSYTATFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVGWYDAKTGGTEWDFATSKMPTSDITLYARFTKNPSSDNSQTAPGKDNDKDKLTIKANDSADATSTKLPKTSDDSSMI----PTILGTLFIGGAILILRKKTTN................................................................................... 489
7 -51.800IDP91680 INLB_LISMO [Listeria monocytogenes]  ali follow..  19  4KHNPRRKYCLISGLAIIFSLWIIIGNGAKVQAETITVP----TPIKQIFSDDAFAETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNK-ITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNINHQSNLVVPNTVKNTDGSLVTPEIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKARFHGRVTQPLKEVYTVSYDVDGTVIKTKVEAGTRITAPKPPTKQGYVFKGWYTEKNGGHEWNFNTDYMSGNDFTLYAVFKAETTEKAVNLTRYVKYIRGNAGIYKLPREDNSLKQGTLASHRCKALTVDREARNGGKLWYRLKNIGWTKAENLSLDRYDKMEYDKGVTAYARVRNASGNSV----------------------------------WTKPYNTAGAKHVNKLSVYQGKNMRILREAKTPITTWYQFSGWVDTRALNTFYKQSMEK--PTRLTRYVSANKAGESYYKVPVADNPVKRGTLAKYKNQKLIVDCQATIEGQWYRIRTSSTFI.............................................................................................................................................................................. 618
8 -51.100IDP05076 hypothetical protein lmo0801 [Listeria monocytogenes EGD-e] lmo0801 [Listeria monocytogenes EGD-e]  ali follow..  24  14LLNGFVPNAHAKTESPSADNNLQVAPPAAIKDLFPDPAMAN----------EVLKSLNLKKLNKKSTSDTVTQTELNSLTGFQAINKGIKSIEGVEYLQNITELDVEKNQITDIAPVANLKKLTTLLINTNQITDISPVADLANLTTFYCGNNPISDISAVQNLTKLSIFNCYTAN-VEDISPVKNLVNLKTLSLGSNNIHDISDIEKLTALEYLSFSNNPVENPEVIGNLTNLNTLWLYNAQIRNIDFTANLPKLKSVYLYNNQISNISEVSNWANIEYLELNNNQITDITPVANLTTLKTLKLNDQIITNREIQKNISIENKVMDNFGNIVTPNNISDNGTYNSPTLSWNLNETKDNLSFTTKITILNINATYSGTVIQPLTKDSTRPIITADGKVSYPTTKTTTEFLTDIHATTDDGSPIEVDLNALDFGTAGSYTVTLTAVDTAGNEATPVDVTIIITSVDTSKPVITAD........................................................................................................................................................................................................................................................................................................................................................... 483
9 -50.100IDP05423 gene: inlH; internalin H [Listeria monocytogenes EGD-e] lmo0263 [Listeria monocytogenes EGD-e]  ali follow..  34  3...................................................KRWNSVFKLVLMVTAILGLSLSQGVEVRAESITQPTAINVIFPDPALANAIKIAAGKSNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLTPLKNLTKITELELSGNP-LKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITNQPVFYQNNLVVPNVVKGPSGAPIAPA-TISDNGTYASPNLTWNLTSFINNVSYTFNQSVTFKNTTVPFSGTVTQPLTEAYTAVFDVDGKQTSV--------------------------------------------------------------------TVGANELIKEPTAPTKEGYTFTGWYDAKTGGTKWDFATDKMPAEDITLYAQFTINSYTATFDIDGKLTTQKVTYQSLLEEPVAPTKDGYTFTGWYDAKTGGTKWDFATGKMPAGNITLYAQFTKND.............................................................................................................................................................................................................................. 484
10 -49.900IDP05553 hypothetical protein lmo1136 [Listeria monocytogenes EGD-e] lmo1136 [Listeria monocytogenes EGD-e]  ali follow..  25  11LLLSFACVFSIGDFTKPHTVEAEIV-----------YSLTNPKPVNEIFTDPKLAQVVADWLKLPAATSSVTQTQLNTIKALHFDSKGVQSLEGVEYLKNLTQVFGYGNQVSDLGPLSNLTKLEVIQMPRNQISDLTPIANLTALMSLDFEFNNLQTIEPIKNLTNMLELNVSANP-ISDINAVKNMTQLEFLTLRDCEVSDLSPVENLSNMLMFWAGRNNISDITPLKNMSKLLGLSLFGNQIKDVSVIKNLTSLEDFDIKANQVSDISSLATSTTLETLTLSFNQIIDISPLKNLTNLTRLELENQTR-ALDAVEIDNPLILPAPVIDENGSRVQPSKVSHAGVYANGEITWEGLQSNYILNYEYALPVTIGSLTTTYSGKITQPLLEKPVDPVTPVDPVDPVDPVDPVDPVDPVDPVDPVDPVDPVDPVDPVD................................................................................................................................................................................................................................................................................................................................................................................................. 433
11 -47.900IDP00034 internalin, putative BA_1346 [Bacillus anthracis str. Ames]  ali follow..  22  1MFLNTNEILDYSALKYMPNLKSLTVANA---------------KIKDPSFFANLKQLNHLALRGNEFSDVTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIEDVTALAKMEQLDYLNLANNKITNVAPLSALKNVTYLTLAGNQIEDIKPLYSL-PLTDLVLTRNK-VKDLSGIEQMKQLEELWIGKNEIKDVTPLSKMTQLKQLHLPNNELKDITPLSSLVNLQKLDLEANYISDLTPASNLKKLVFLSFVANEIRDVRPVIELSKTAYINVQNQKVFLEETEVNKEVKVPIYEKDGKISTKIRLKGEGGTYSNDAVKWSTPGEKVYEVKDPFADTGIFFTGSVIQNVVESKADNTSKEDNTSKEDAKVEVVEFKDVPKGHWSEEAIHYLAKENIFKGYG.......................................................................................................................................................................................................................................................................................................................................................................................................................... 396
12 -47.800IDP02569 gene: inlE; internalin E [Listeria monocytogenes EGD-e] lmo0264 [Listeria monocytogenes EGD-e]  ali follow..  26  1..........MKRNKTALRILVTLAVVLAITFWVGMSSKEVQTPINEIFTDPVLTDNVKTLLGKADVTDEVTQTDLDSVTHLSAKSAGITTIEGLQYLTNLSELELIDNQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQ-ITDITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIAPYTSPNLTWDLNSFINSVSYTFNQSVTFKNTTAPFSGTVTQPLTEVYAVVFDVDGEQTSAMVGVNELINEPTAPAKEGYIFDGWYDAKTDGNKWDFGIDKMPASDITLYAKFT................................................................................................................................................................................................................................................................................................................................................................................................................................ 409
13 -46.100IDP05699 hypothetical protein lmo2396 [Listeria monocytogenes EGD-e] lmo2396 [Listeria monocytogenes EGD-e]  ali follow..  14  3........KLVKIILALFLITTVFLPFSNVKAAPTDVVNIPDSGLKNIIGNPFLDEITEANMATITVADLSNMSGAPGYPVT----GLIKDLTGLDKAVNMTKLYFSNSQIKNLDKIKNLPNLKKIVAVTTGLNNISALGEMPALEEVELGGDYITDFTPLLEKENLTSFSYNSYAWNDEFKNFTKLKSLVKLDLTWNNITDLSPLTENDHITNLNLNYNQFTNVAPIATMKNLKVLYLNNNNLTSIDALNTLRGLTIAYADNNNITDLSNLKNFFEAMVAQGDYEGLQINNQTITLPTINIKKGATANSTNPTLDINGQKMPVSNISNDGTVSADNKTVSFANLPIGNKTVTYKAKFTATSSKGVPLSYSINVSQPINVSEQTDSTVSVFYQDENGNELAPTETLSGKSGEDYQTTEKTIANYQLKEIEGQASGQFTDTDSTVTYVYEKADGAPVTVKYVDADGNDLATSDTLNGKIDAPYQTSAKSLSGWTVKTTPNNATGVFT------NSKQTVTYVYEKADGAPVTVKYDGDGNELATSDTLNGKIDAPTAKSLSGWTVKTTPNNATGVFTNSKQTVTY------VYEKADGAPVTVKYDADGNELATSDTLNGKIDAPYQTTAK--SLSGWTVKTTPNNATGVFTNSKQTVTYVYEKADGAPVTVKYVDADGNELATSDTLNGKIDAPTAESLSGWTVKTTPNNATGVFTNSKQTVT------YVYEKADGAPVTVKYVDGDGNELATSDTLNGKIDAPYQT-TAKSLSGWTVKTTPNNATGVFTNSKQTVTVYEKADGAPVTVKY......... 804
14 -38.900IDP01994 hypothetical protein lmo1290 [Listeria monocytogenes EGD-e] lmo1290 [Listeria monocytogenes EGD-e]  ali follow..  16  1.......MSVKSNIVKIGVCFAVLAVPVSQTTLPVFAAEQPGLKASQ-IPDSTFKAYLNGLLGQASTANITE-AQMDSLTYITLANINVTDLTGIEYAHNIKDLTINNIHATNYNQISGLSNLERLRIMGADVTSIPNLSGLTNLTLLDLSHSAHDDLTKINTLPKVTSIDLSYNGAITDIMPLKTMPELKSLNIQFDGVHDYRGIEDFPKLNTLLAYSQTIGGKKLINSDIKSSKLTYNAENQTLYVPFSLMTERTVNYDGYVPDFVKS---TASSDTYFTMNEQQVNGNRLTITSDGLTVSDVSKTDFDNLEKMEYNARIDLSYQSYNTPEQFQNGGSYT--ISMPIYDHYFTVDHSLNITADSEKTYIENQLVTEATFLSDIHAKTD............................................................................................................................................................................................................................................................................................................................................................................................................................................... 384
15 -38.500IDP05656 hypothetical protein lmo0171 [Listeria monocytogenes EGD-e] lmo0171 [Listeria monocytogenes EGD-e]  ali follow..  13  11ALCFSLVSPSLY-ASADTITAVQITKEATTDTTEPTTIDQPSRMDNSQTAPQKMTASSSEEAATTNSTEEE-NTPKNNLKSTSENSKTYAELFPDVNLAKIIAKNISGTEINAEVSEAELQTITNLVATNQNITSLTGIEHLTALENINVNNNELTTIDSLFNIPTLKSISANNNKITGNFSLVKTLPELHTLEVLGNAITELD-IENQPNLVTLSADELELKKLT-LKNLSQLNGLGRIASSIS---------------IDWGDLESVT-LMNLPEIISVDISGNYLDSDIHLENLPAVKNLDISSNELTRLPKINDFPLLTTINVRSNKIDRL--------------------ESSKLVDVPKLATLNADKQAVTLSKTIAAGNFTIPNNVENLAGQMVTPKIISNNGTYSDQSIAWASGELSGLSKVSYTEVINSPAIAGKYTGTVNQPIEVKAVPVIVADKSVSYAPVNAKDEATFLQDIRASASENAQITSDYSEVVDFATPGDYTVTLHAKNEFDLKADPVTVVVHINDIQKNSNDISFEVGTELTSEVLLAKSGAVVTDLYDEAIKMEVDLSEVDSSKLGTYEA---------TIIAKSKSGASSDPIKLSVKIVDTEKPIGSELTEGQIIDQVGITATDNYDQDLNIHMDLSKVDTSKPGSYEVTIYTEDSSGNRSETVTITVKETLAKEIEGYTLKENPANSSG-------VFEETRQTIQYIYVKDIINPEFPVYSENNVTPELPSNNNNSVNGSRQTPSKSVKKQSKAY--KINQMPMNLPETGDSTNLLFIFMGVLLLAGLTLSKAKR. 829
16 -38.100IDP05426 hypothetical protein lmo0610 [Listeria monocytogenes EGD-e] lmo0610 [Listeria monocytogenes EGD-e]  ali follow..  17  1.............MKKMGVKIGLCILLIMPFTISFSANVSAEAQDVVNIPDPALKSYLNGLLGQPSTSDITE-AQMDTITDVTISNASLTDLTGLDYAHNLTILHLTNTGVTDYSLVANIPSLTNLNISGSNLTTIPDLNGLTNVTNLNLSSGKLDALTKFNKLPNLTFLNLDNNPSITDFMPLKSLPNLASLFIQFCGVNDFRGIDSFPKLTNLAAFGQNVGSAILINSTIKSSALNYNEANQTIFVPFTLMTERSMNFDGYLFTTNTASSSTYFTLNGVQISGSRLSIDDTGVTVSGITKDFF-----------DSITKMEYNAFYDNPAGSYNSPPNFNSYSVSSGTYDHYFDIDHSLTITNDSAISYGEQTTVT........................................................................................................................................................................................................................................................................................................................................................................................................................................................... 366
17 -38.000IDP01745 hypothetical protein lmo2821 [Listeria monocytogenes EGD-e] lmo2821 [Listeria monocytogenes EGD-e]  ali follow..  22  4TKIVIASLVSLT-MVSNPLLTFAATNDVIDNTT----EITTDKETSSTQPDDNFASEVAAAFEMQATDTIS-EEQLATLTSLDCHNSSITDMTGIEKLTGLTKLICTSNNITTLD-LSQNTNLTYLACDSNKLTNLD-VTPLTKLTYLNCDTNKLTKLD-VSQNPLLTYLNCARNTLTE---DVSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITELD-VSQNKLLNRLNCDTNNITKLD-LNQNIQLTFLDCSSNKLTEID-VTPLTQLTYFDCSVNPLTELD-VSTLSKLTTLHCIQTDLLEID-LTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGITELD-LSQNPKLVYLYLNNTELTELD......................................................................................................................................................................................................................................................................................................................................................................................................................................................... 385
18 -35.700IDP05549 hypothetical protein lmo0549 [Listeria monocytogenes EGD-e] lmo0549 [Listeria monocytogenes EGD-e]  ali follow..  18  3................................................FNWKVVLLFVLILAFIVPVYSKAVETGKEVPKSPELLDDKSSTLKNVNTPKNLKASPLANSTIADLFPDEGMNNFQTPTKTDWKVDDVVTEVELNRMWYLTS-VATIGSIEGIQYLPNLYDVRLQFDKQCKDLSPFNGYSQLYRLNINNGNISDISPLTELSTLNDIDLGGNNISDLSLFPKLPNLEEISLERNNISDVSPLAKFTKIKIFNLDENHITDLSSLTKMPNLQRLYVRYQTLDMEPVVTSSKYEFSIQPSIFKITATKPKATIDPITSKITYSAEEMAKKPFYYTPLFPGVTYSWDENFPLNGSNSLVDFR...................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 356
19 -35.100IDP01918 hypothetical protein lmo0514 [Listeria monocytogenes EGD-e] lmo0514 [Listeria monocytogenes EGD-e]  ali follow..  15  3.KALKLFLATICMFIMIYPSTAAHAEETNIVNI----------------PDANLKTYLNGLLKQASDAPIT-KTQMNTIQTVTLSGSTYTDLTGLEEAGNLVTLSLNNTNIQTLEPIKNQTSLTYLTVGGDNVKLFVDLNGLVNLQSLSINGSEVTHFKTFNKLPKLTYLYAQNSMKITDISALASLPALTTLFLQFDGIDDFRPLNDFESFKNGNLKALAAFG-----------------QNTGRTNPRITLKSGKLDYNETNQTLYLPFSMMPKPLTSFDGTVAPFSKSTSASNTITDDGITVSGVTKEEFDNLDEIEYNARYDFPTGSYPTPPSMTSYTISSGTYDQYFDISHTLDLTADESFD...................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 353
20 -33.100IDP02440 hypothetical protein lmo0331 [Listeria monocytogenes EGD-e] lmo0331 [Listeria monocytogenes EGD-e]  ali follow..  21  22IPMVKAESTTANEMKTENQLLKTDLKETPKEKTPNQLVQAGTKTYNDYFPDDNLAKEVAETMNKNADESVT-VEELAKVTKLDARSQGIEDSTGIEYLTGLEVLNLEDNQLKSID-VSKNLNLKELTCSNNPLANLD-VSKNLALEELTCENNELTQLD-VSQNTALEYLYCPRNQLTK---DVSKNSALRYLACDVNQLTNLD-VSKNPALTNLGCTKNQLTDLD-VSQNPNLGTLVCSDNQLTNLD-VSQNQALENLACDNNELKNID-INQALSLKELSCENNQLTNLD-TTQNLALEILYCDDNQLTDLD-VRKNVNLLILFCNNNQLTNLAV---GETIAKVRCNNNQLKDVSSLPDYF......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 375
21 -32.800IDP02661 hypothetical protein lmo1289 [Listeria monocytogenes EGD-e] lmo1289 [Listeria monocytogenes EGD-e]  ali follow..  16  9MKIGVCSVMVLVPLSSLPSFAAEEIALKESQD-------------VVNIPDPQLKKELNLYLNQAENADITE-AQMATFRNITLNSG-IKDLTGIEYLKNITTLSIN-NINASYEPIQTLSSLEKLVINGENVNAIPDLSVLSNLTFLDLSRTNIDDFSKISNIPNLNKLDISNNKGITKISELNNLPSLQELRVSDCQITNFKGIEKFPNLTAFYGDGQLFGDSFETDGFKNIKSSELTFDANASIVTVNTILNYDGLSLPYNTNPDYTSIALGDQSYVVTNDKISINQQGTLSDFTQADFDELEAFEVYLGFDSGNISKPANLANGTYSLKQIGSYRAFSVDHSVNITAQDNISYIQNDTVTPEKFLT................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 377
22 -30.400IDP91625 gene: ECs2073; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB35496 [Escherichia coli O157:H7 str. Sakai]  ali follow..  13  3FPSIFNKIKPQS-IQQHPEKNQLNWMLELNKWKEERILTGEIHRPEKRINCAFLSKQNDIDLSGLNLSTQPP--GLQNFTSINLDNNQLTHFD-ATNYDRLVKLSLNSNTLESINHQGRNVSITHISMNNNCLRNID-IDRLSSITYFSAAHNKLEFVQ-LESCEWLQYLNLSHNQLTD---VTGNKEELLLLDLSHNKLASLH-NALFPNLNTLLINNNLLSEIKMYSNFCKVQTLNAANNQLEKINLLTYLSSIKSLRLDNNKITRIENTSDIRSLFPIIKKSESLNFLN-ISGENNCPTIQLMLFNLFSPAKLNTGLAILSPGAFEDHSDGLD-VDNELFHYTINKAYTPYNIHTTLDEINNTYCNNDYYNEAIREE......................................................................................................................................................................................................................................................................................................................................................................................................................................................... 401
23 -29.900IDP91701 gene: SLIT3; slit homolog 3 protein precursor [Homo sapiens] NP_003053 [Homo sapiens]  ali follow..  20  45VDCHGLGLRAVPR----RNAERLDLDRNNITRITK-------------MDFAGLKNLRVLHLEDNQVSVIEAFQDLKQLERLRLNKNKLQVLPEFQSTPKLTRLDLSENQIQGIPRFRGITDVKNLQLDNNHISCIEAFRALRDLEILTLNNNNISRILSFNHMPKIRTLRLHSNHLYCDLAWLSDWLRQRRTVGQFTLCMAPVHLRGFNVANIVDCRGKGLMEIP-----EGIVEIRLEQNSIKAIPAFTQYKKLKRIDISKNQISDIAPFQGLKSLTSLVLYGNKITEIALFDGLVSLQLLLLNANKINCLRVFQDLQNLNLLSLYDNKLQTISLFAPLQSIQTLHLAQNPFV.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 440
24 -29.800IDP05081 putative cell surface protein, internalin proteins [Listeria monocytogenes EGD-e] lmo2027 [Listeria monocytogenes EGD-e]  ali follow..  14  2.............KKILTGLSTTLLLTVLL--------------LTITGGDLKAKAASDLYPLPAPIIDVFPDEGLAKDMAKNLNKDSVNDVIDQDDLDALTGLGITNDSMQLLERMFNNVNIVSVMEFGEDLTEFPDISTIPHLNTLFFNTPPEGVTPDYQNYPEMVTITMSGSNLIGAIPDFTGMPDLSQLYMADMMITSDPDFHTIPKLSTLDLSHNQLTNLPDFQNLTNLAELNLSFNNLTNTTNFTNLSNLNNLNLDYNHLNELP-----SNVLNSIFIENQSGTVPDIIKQGETCTIQLP-FQLAEINMLVNPTPVEVVTTTNADTESIDTSELSPGVYNFNVQFNDAYPIQEGCVYDWVLTVN................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 367
25 -28.200IDP95476 internalin [Listeria monocytogenes EGD-e] NP_465993 [Listeria monocytogenes EGD-e]  ali follow..  17  27....................................................KAKAASDLYPLPAPIIDVFPDDGLAKDMAKNLNKDSVNDVIDQDDLDALTGLGFETSTITN-AMFNNVTDVSIMEFGAKEFPDITTIPHLKTLFFADPPGRLTRNLPNYQNYPEMDTITMSGNNLIGSIPDFTGMPALKQLYMSEMLITSDPNFNNIPLLITLDLSSNQLTTIPDFQNIPNLTFLDLNANLLTNTPDFQNLPKLTDLNLRHNNLTGTVNYTNLPSLESLNLDYNFLTELP--SNVLDTIYVQSQNGELPD--QTINQGDTCTIDLETNMLVSPEVTGEYIGISVIQLPTTVNEEGNTITVSPGEYKLDVSYNHNYATGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................ 377
26 -27.900IDP91619 gene: ECs2672; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB36095 [Escherichia coli O157:H7 str. Sakai]  ali follow..  13  2FPLNDLSLKTQSQLNKITSNTESTIKQHELVSDDAI--------------INELSSELVSCLGNDKFTPVSESNLLNMLSEFKLLREQCFRWGNTLLFENYGAYDKTGSITIEKSQEGTLPIRHKLEFISTNIAELLDLTKITDARLCKGFSDWASSVKEGASNLHSNELNLSSLSLGSVPP---LPEWIEMLSLVYNELDSIQ----PESCKELELDFNNLTEFPQV--PDGITLISVNNNLISYIDSF--PPKAKKIFICHNKLSEIP--ALPDTAKVFDCSENNIKEIRWF--PKNLKEAYIEYNKIEVIPAI--PGNLKLLCMKCNPIKEAFLMWTLTGIRYEISQRKYIVMNADYDKYSDMVKKHVIDGEEFIIK......................................................................................................................................................................................................................................................................................................................................................................................................................................................... 376
27 -27.000IDP95186 gene: lmo2445; lmo2445 [Listeria monocytogenes EGD-e] CAD00523 [Listeria monocytogenes EGD-e]  ali follow..  16  4............................APTIKAQADTVPLPAPIIEAFPVEAIAEAIAGELDKDSVNDTITQADLDTMTAI-----------------PLPSLGLTGEDLSVLNN-EVFTNAIELAIWSNNIGELPDSEALPALENIEANGANITVF-PDANYPNLTNVDLSQNNFGFNIPKFVGMEGLVSINMENAGLSGYIAWMNMPNLDSLILNENHLISIPEIFLSQQLGTHSFANQTATYPPTIKQGENLKVFVPFIYQALDFIAP-SNHDLIIIKDNGRTLYEPPYTYDGSYMYTIETAGLQPGEHLEISLGYNSGEYTGWYDFPVTIT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 299
28 -27.000IDP91618 gene: ECs2674; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB36097 [Escherichia coli O157:H7 str. Sakai]  ali follow..  11  2FPLNDLSLKTQSQLNKITSNTESTIKQHELVSDDAI--------------INELSSELVSCLGNDKFTPVSECNLLNMLSEFKLLREQCFRWGNTLLFENYESYDKTGSITIEKNQEGTLPIRHKLEFISTNIAELDKLTKITDARLCKGFSDWASSVKEGGS-LHSNELDLSYLFLGSVPPLPD---WIEMLSLVYNELDSIQ----PESCKELELDFNNLTEFPQV--PDGITLISVNNNLISHIDSF--PPKAKKIFISHNKLSETPAI--PDTAKVFDCGYNKIQEIRYF--PKNLKEARIGYNNIEVVPAI--PGNLKILFMECNPIKEAFLMWTLTGICYEISQRKYIVTNADYDKYSDMVKKHVIDGEELIIK......................................................................................................................................................................................................................................................................................................................................................................................................................................................... 376
29 -21.400IDP05561 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo2026 [Listeria monocytogenes EGD-e]  ali follow..  10  2................KKKFVYLLLLVLFMTVLPFAQAASTSWIEQELDGNEPFIAETEKILSKNRQD--ITLADLETIQKIHV--FGADSIPNISDYKNLTALEANYGTITEVPEVGSLKELVTLNVDENNLQEFPVIFQLPKLEVLYISRGNITEIPTITTLSHLKVLDVSNQKLVTIPDSILTTNWKAMHDGKLGMSLAGNQIASDIPANYLDNFNSGGNMLEPTIDYLQKQDQLTYTGGTIEVPLNTDFKQLTPDKTNLGLKSNIPLFSQYYDDGTSANILTNGVATDGDGYITIKSTLSTNSNPFAKVRVIKVTAPLKGADVTVQYLDSNDTLATPDILS------------GNEGDAYASTPKTIDGYTLTQTP......................................................................................................................................................................................................................................................................................................................................................................................................................................................... 369
30 -18.500IDP05755 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo0732 [Listeria monocytogenes EGD-e]  ali follow..  15  1.......MKKAFLCLSAIVLSLNFVWINPITGSASKI-------------ETTKETNQQVNLKNNVTDIVTSLGGQTWLNEVNRQLAPKT--LTFEDLAKITTISLNNRSLTG-PEIKNLVSLQRLYLFSNKLSG-AELGELTKLTELRLDYNELSGKIP-DGLGNISEIALQNNRLVGQIPLYENRTGKNEVNVSGNQVTI-QSEPSVYSAYTYPSSTPEYSG-ANNSFISNLTNDMNLTPFLKNSPT---FINLQVVYMFNSELFDGHDVTITDTNDGRVLYDGTLTS-IPLTNFKSGVHVINVMLDNAP-PVPAHDLTVNYVDEAGAEIHEPQTVSG-NVGDDYDVTTPEFE.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 362
31 -16.700IDP92552 gene: NOD2; nucleotide-binding oligomerization domain-containing protein 2 [Homo sapiens] NP_071445 [Homo sapiens]  ali follow..  18  671LQITAAFLAGLLSREHWGLLAECQTSEKALLRRQACARWCLARSLKSVHAMPGFIWLIRSLYEMQEERLARKAARGLNVGHLKLTFCSVGPTEVLQHLRRPVALQLDYNSVGDIG-LPCLGVCKALYLRDNNISDIECALHCEQLQKLALFNNKLTD----GCAHSMAKL-------------LACRQNFLALRLGNNYITAAEGLRGNTSLQFLGFWGNRVGDAEALGDHQSLRWLSLVGNNIGSALMLAKNVMLEELCLEENHLQDAEGLKKNSSLKILKLSNNCITYLQALERNDTILEVWLRGNTFSLEEVDKLGCRDTRLLL.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 1040
32 -15.600IDP05226 putative membrane associated lipoprotein [Listeria monocytogenes EGD-e] lmo0460 [Listeria monocytogenes EGD-e]  ali follow..  13  89.........DDSDLTVVNSGDFWTIYRNTVNGEYSLHMFGNVPSSKPTAWNSYLNRIKHIEIEEGNFSSYFRNNVFTVLESVRIERSNLSRVTSFALAEKVIIRDNNYPTAPSLLTTEGMSNLMEVDLSGLDTSAVTTMWDMRALEELDVSHFDTSSVTNMSYMRNLEVLDVSNSSVTNMYAMFEDCTSLEELDVSHFDTSSVTDMYRVEKLKKLDVSNFDTSSATAMVQMSALEKLDVSNFNTSLVTDMRAMTSLEALDVSNFDTSSVTNMAAMEKVEKLDLSTFDTSSVTNMGTMTALKSLYLDN--------FTHAASSTDMFTGTTSLSYLFVSHNVSNFNGLE......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 464
33 -14.500IDP01916 hypothetical protein lmo0327 [Listeria monocytogenes EGD-e] lmo0327 [Listeria monocytogenes EGD-e]  ali follow..  12  2.......LKKIIALIALVVIINTVSFTSVSASTPTWLEQTMNNNEPFIKEIETETGKTRANITQTDLEAIT-----------ALRVTGASDIANIDMLTHLTLLKAVQGTISSVPNVGNLKELKILNLNTNHLSNFPTVYQLPKLEELQLNDGTIEEIPA-NMASHLKFLTVNNNRLVKVPTIIFSTGELDLFTTGNQIVTDIPA-NMLEFYDGQFQKQDQLTTTP-----GYTIDVPVGTDFNQLTPDKTKLALTSGRTLLAQHEFEYYDDGSSSLIHNGVAAAPGQATIFIKSKFSTQSNKFARTQVTVNIAALNG-ITVKHEDTKGQELAPPVILNGKDG-DPYTTTQKTFPGYT-LVATPANQNGAFTLNPATVNYVYSANDYKLTSTFKDAQGQELKAPVVDTKDYHIQDNYTTTAATIPGYSLVSTPANQNGTFGAGNVTVNYVYKKDDYTLTSTYKDTNGQELKAPVVDATTY-YTTTAAVFPGYTLVATPTNATG---------TFGSSNITVHYVYQANGYQLTSDQQGKTISPDDVDTKTYHVNDPYTTTAKTIPGYTLVTTPTN----NQGNFGTSDITVDYVYKAEDYTLTSDAQGKELKQPVVDSKKYHSTSAATIPGYTLVATPANETG---------TFHTSDVTVNYVYKLTDLKLTSDAQGTELKPPVVDSKTYHIQDNYATTAAVIPGYTLVATPANQ----SGTFGSTDIQVNYVYQAVAYKLTSDQQGNDLALPKVDTKTYHIQDGYTTSDIAIPGYTLVAAPTNQTGTFGASDVTVNYVYKANDYTLTSTY......... 806
34 -11.700IDP91566 gene: ECs1568; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB34991 [Escherichia coli O157:H7 str. Sakai]  ali follow..  13  1...................................................................................MLPTSQLRPT-GTFCSYSAETSADIKSEITPIQIEEARASGRLYIKDCDIEYLPQL--PNEITSVTIENNNLTTLTGL--PVNTQNLSVINCEKLQITD-----STVKNLHIELTDSPFIHFISE--GIECLTVCHCYISGVP-----ESVRYLEIKGSATDSIKNV---NGLSSLSINSYNPENQIDNLISPSLKTLSLTGSNIILPEKL--PESVTSVTIHAEKTTWNIGVEGMPDG--LDLDLQNVLLSPDVVKAKNIT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 246
35 -10.700CPX_91686_91680 Complex of A1L467_HUMAN with INLB_LISMO [Undefined organism]  ali follow..  12 1452...................................................................................................................................................................................................LKKKSVTDAVTQNELNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNKPINHQSNLVV---------------------------------------------------------------------NTVKNTDGSLVTPEIISDDGDYEKPNVTNEVSFIF--------------YQPVTIGKAKARFHGRVTKEVYTVSYDVDGTVIKTKVEAGTRITAPKPPTKQGYVFKGWYTEKNGGHEWNFNTDYMSGNDFTLYAVFKAETYKLPREDNSLKQGTLASHRCKALTVDREARNGYRLKGWTKAEN---SLDRYDKMEYDKGVTAYARVRNASWTKPYNTAGAVNKLSVYQGKILREAKTPITTWYQFSGWVDTRALN---------------TFYKQSMEKPTRLTRYVSANKAGES----------KVPVADNPVK-----RGTLAKYKNQKLIVDCQATIEGQL.................. 1998
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.