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Query: IDP05695 hypothetical protein lmo2080 [Listeria monocytogenes EGD-e] lmo2080 [Listeria monocytogenes EGD-e], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .
# Score Template Links and tools%idFirst MMTGFKKVILPVLLVVLFLAGCNQAEVPALVLDGTITDTSLLENNNELTVNGTLTWNGEKNDYASEVMITVSSNTAVTNATTGKAMKLADIKEEDTVRAVFPQGSNITSPAPGKVSENATSLKVTPKLast
1 -74.000IDP05695 hypothetical protein lmo2080 [Listeria monocytogenes EGD-e] lmo2080 [Listeria monocytogenes EGD-e]  ali  100  1MMTGFKKVILPVLLVVLFLAGCNQAEVPALVLDGTITDTSLLENNNELTVNGTLTWNGEKNDYASEVMITVSSNTAVTNATTGKAMKLADIKEEDTVRAVFPQGSNITSPAPGKVSENATSLKVTPK 127
2 -41.100IDP05607 putative lipoprotein [Bacillus anthracis str. Ames] BA_4862 [Bacillus anthracis str. Ames]  ali follow..  14  1MDRHMKFMFMFLGVVLIILAACTTKSVEQVPKEGYIILR----NETVFLADDKTFETKIELQNYIEQQMNQDYPSDIVLIFKDKD-AYDQLKTGDKIKVWSSQ-TFESYPVKMIVEKFEIAEK.... 123
3 -38.500IDP05448 hypothetical protein lmo2594 [Listeria monocytogenes EGD-e] lmo2594 [Listeria monocytogenes EGD-e]  ali follow..  21  1....MKKSIIFIFCTLLFVTACSTSQTQATEATGTIEQV----ETDAILINNF---KEKKDKYNPEAAIRFDIVDKYY-DETGNKIKITDLNKNDDVKIILDFPIQETSPAQIDPKYVQKIILLN.. 118
4 -16.400IDP05670 hypothetical protein lmo0617 [Listeria monocytogenes EGD-e] lmo0617 [Listeria monocytogenes EGD-e]  ali follow..  10  1.MKKLKSILMGIITFALALTACGGTEDKASTEKIETAKAETKKKSNKVEILSSEVVKDFEGNNAIAIKTKFTNNSKQQAFQNGTQLETKDVQPGGTLEVTE------LYKLQDTQNTVDIE...... 145
5 -14.800IDP05125 putative lipoprotein [Bacillus anthracis str. Ames] BA_4310 [Bacillus anthracis str. Ames]  ali follow..  16  1....MKKLIMTLFIAMLALAGCNTNKEEPKKEQKVQTNPKEIKPGEKTEVQALVTQGKEKVTDADDVKFEVWKA----GDEKHEMLEGKHKGKGVY-------AVEKTFETDGV--HIIAHTNAR.. 116
6 -14.600IDP05121 conserved hypothetical protein [Bacillus anthracis str. Ames] BA_0915 [Bacillus anthracis str. Ames]  ali follow..  11  1.MLKKFTTCILGGALVFNLSGCGNTSDKTSSESKETNSKQEEKNVQTTDEAKTKENTKQKNTEQTKEKSKIKEKEYAVNKDPKFDVTVKRVVERDKV----GKESIGFQKPEDGHVFIVVEAEGK.. 123
7 -14.500IDP04197 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_2510 [Clostridium perfringens ATCC 13124]  ali follow..  16  1....MKKPVLVIIIFALLFVGCTNSSNSSSDSSVEIINSNQQNSNSNNNNSSNNDTKKSDSNNASH............................................................. 65
8 -14.300IDP91154 hypothetical protein SAOUHSC_00808 [Staphylococcus aureus subsp. aureus NCTC 8325] SAOUHSC_00808 [Staphylococcus aureus subsp. aureus NCTC 8325]  ali follow..  10  1....MKKVMGILLASTLILGACGHHQDSAKKESTSHKKKENDNEELNEELKEFKSKKNMDIKVSDKFEAKIKEPFIINEKDEKKKY......................................... 88
9 -14.300IDP04392 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_1500 [Clostridium perfringens ATCC 13124]  ali follow..  7  1....MRVLVILAIIPAFLFMGCGEFSKND---VAKVSFEKLSEKEEQIL--------------------LTDNRVFFYKVKNISKNKGYRIDL--NYEVYKEGKEVKN................... 82
10 -14.000IDP05580 putative lipoprotein [Bacillus anthracis str. Ames] BA_0936 [Bacillus anthracis str. Ames]  ali follow..  26  1.M--LKKLGILVLAVALSLVACGDSTKEASNEKKEEPKQEAKKENKE................................................................................ 46
11 -13.900IDP05508 putative lipoprotein [Bacillus anthracis str. Ames] BA_5398 [Bacillus anthracis str. Ames]  ali follow..  6  1..MTIRKRTSFIWIFLFSLVACSPPNTT------------IDKKNDVVVKGTGISNLDKFEQFVLNVEQVKVDKIRIVHYTHEGDPIFQTLESKNDILYASD......................... 89
12 -13.900IDP04088 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_2931 [Clostridium perfringens ATCC 13124]  ali follow..  11  1....MKKGMILLILSSFLLVGCDSIKMDKLAANNNERVKTIANDL-------------IGDIDLSLYFDGTKDEQNPKIEQQEILVDGDEILGQYLIQALIQGPLAPILPKDTKLLSFDIK...... 109
13 -13.700IDP05658 hypothetical protein lmo0207 [Listeria monocytogenes EGD-e] lmo0207 [Listeria monocytogenes EGD-e]  ali follow..  16  1.MKMLKKGTLFVMIMAVMLVACGDKEETKTGVDSKLTYTYKGDKVTKQTAENTMSYASLGVASKEDAEKMLKATSDKFQGIDGEKIEYKDDKAIETLEVDYT......................... 111
14 -13.600IDP05437 putative lipoprotein [Bacillus anthracis str. Ames] BA_2898 [Bacillus anthracis str. Ames]  ali follow..  13  1....MKKVLLIIPLFIILLSGCSNN-----DIYGS----VVDNKNGLCPISYKFETVVKEEKKEKIIQYLVEMQTT---KKKEDLYKGSFVKDSNVYHIDYGNSFTSDQTLQVVDGKLNVYFYAVEK 113
15 -13.600IDP05588 putative lipoprotein [Bacillus anthracis str. Ames] BA_2883 [Bacillus anthracis str. Ames]  ali follow..  12  1.MKVYVKLLCLTFTCIFALAACKGTDEKKETNPTSENSKNEQNTSSEGKKEPEVKSNTDSNSKDIV............................................................. 67
16 -13.500IDP05010 putative lipoprotein [Bacillus anthracis str. Ames] BA_4934 [Bacillus anthracis str. Ames]  ali follow..  12  1.MKKVLMLFVLLLTASILLIGCSTKKEKAGMNLEKAQKVEIESLTDSSEKK............................................................................ 50
17 -13.100IDP05677 hypothetical protein lmo1068 [Listeria monocytogenes EGD-e] lmo1068 [Listeria monocytogenes EGD-e]  ali follow..  14  1....MKKVIISIISLVALLGACGNNDNEKDQEDKSTTDSTTKKAKSSSNESNKAAETKENDTNDKAATTDKGSSNPTKEEKDTSTTTDTPKKETPKSP............................. 96
18 -13.100IDP05078 hypothetical protein lmo1340 [Listeria monocytogenes EGD-e] lmo1340 [Listeria monocytogenes EGD-e]  ali follow..  10  1....MKKLITILVGLVFISFGCSEEKETPKKTAKEVQGVQIKTKEFQRVVG-------------------LSKDSVLLQTKKSGVTYF-NIYNEKKRPIFNTKESISEVQISPDYRNILLYSAES.. 110
19 -12.700IDP05313 putative lipoprotein [Bacillus anthracis str. Ames] BA_1061 [Bacillus anthracis str. Ames]  ali follow..  17  1....MRKLLTVIGITFLILAGCSNGDFEKEIDAGKTALTNKEYKNALSSFERALDEKKDDSG................................................................. 58
20 -12.700IDP05460 putative lipoprotein [Bacillus anthracis str. Ames] BA_0985 [Bacillus anthracis str. Ames]  ali follow..  10  1....MKKIICALTALSFTLIGCASTSATDKSPQAKQEHKQNAFQLNSANITDIEILQTTNNTTSKSQTDNKEMIQSIVSAVQKGTPKTITLDQKKTITVTYKDDAKEEF.................. 113
21 -12.600IDP05009 putative lipoprotein [Bacillus anthracis str. Ames] BA_4237 [Bacillus anthracis str. Ames]  ali follow..  14  1....MKASIFVLCSFLLMLSGCFHQEEKKVEPKKKESIPETKEYGGRELKKVGQKVKETGWGTFKLEQIHSVNQT.................................................... 73
22 -12.600IDP05242 hypothetical protein lmo2079 [Listeria monocytogenes EGD-e] lmo2079 [Listeria monocytogenes EGD-e]  ali follow..  9  1....MKKLLSILLALVLVISACGESAEEQGKFVQTMKNGMNVPDQYTYTTSFAVNDINVSSTDPSAQTMGILKDIKL---SVTTSTDKKANKSEAKFNVTSTNPISMDLDFLVDSKTGNAYIPLKT. 130
23 -12.500IDP05148 putative lipoprotein [Bacillus anthracis str. Ames] BA_0177 [Bacillus anthracis str. Ames]  ali follow..  11  1....MKKFVSSLVLAISLGVGCSNEKTAKTDEPKKESVQKEKELTAKDVFKKTNEAFKNEEHVTMTYGVGVKAE..................................................... 72
24 -12.400IDP05763 hypothetical protein lmo2331 [Listeria monocytogenes EGD-e] lmo2331 [Listeria monocytogenes EGD-e]  ali follow..  15  1....MKKLAGFMLAFSIFLTGCGGTDNTRKENHSDGSAEVKNKKDNNTSDEYVEDGLLLKVGEWTKDKDYDTKVTLEKIATPKIKVGLGDLNM-KDVKI............................ 100
25 -12.400IDP06193 gene: lpp20; lipoprotein [Helicobacter pylori J99] NP_224067 [Helicobacter pylori J99]  ali follow..  10  1MKNQVKKILGMSVVAAMVIVGCSHAPKSGISKSNKAYKEATKGAPDWVVGDLEKVAKYEKYSGVFLGRAEDLITNNDVDYSTNQATAKARANLAANLKSTLQKDLENEKTRTVDASG.......... 117
26 -12.400IDP05442 putative lipoprotein [Bacillus anthracis str. Ames] BA_0171 [Bacillus anthracis str. Ames]  ali follow..  11  1MSKKLLSLFSAVIVAAFVITGCGQSDTTNKEQKENAAKENKTEKTDTTKENKPEEKNPKTRKLKIKRRKIPLLAPAIILNLFPTWKKKQAEKQKFFLKI............................ 99
27 -12.300IDP05267 hypothetical protein lmo0255 [Listeria monocytogenes EGD-e] lmo0255 [Listeria monocytogenes EGD-e]  ali follow..  12  1....MKKFLLSILVLALLVTACGSDSSDKKSAKKEEKMETVTYIADINGAKLEATFSHVGDN................................................................. 60
28 -12.200IDP05429 hypothetical protein lmo0791 [Listeria monocytogenes EGD-e] lmo0791 [Listeria monocytogenes EGD-e]  ali follow..  13  1....MKKSMVLVLAMVLVLSACGASRVEPKKGEITVNAVVYNKDTDKVKDVYGEDGSKFEKEFETSFKESFISTFTASFSSDVNLDKQVDEFYDALRKQVNEKTSYTTKVTNDDKESPEIQFAIKG. 126
29 -12.100IDP05592 putative lipoprotein [Bacillus anthracis str. Ames] BA_3194 [Bacillus anthracis str. Ames]  ali follow..  10  1....MKILGIIGALSITLLIGCTSNSNETKASEASTAVKEKEIVYENVMFEQKEVRKLEISPVNSKSSNQVVNTENIMESAEKKTLLLDQEAKNYKMKVTYQDNSIQEF.................. 118
30 -12.100IDP05390 putative lipoprotein [Bacillus anthracis str. Ames] BA_2766 [Bacillus anthracis str. Ames]  ali follow..  17  1.MKSIMKVTCTALLFTGLMAGCNGNTAPKQEKSAIEKNAMHYGEIVKNEYYRATVENAKFEKIDKERRITTRVMINNVRDD-GQTIDLSEIKQDEKTGQKYEGEAHPI-HEFSLTTDVVFELKTSPK 136
31 -11.900IDP06159 hypothetical protein jhp0866 [Helicobacter pylori J99] NP_223584 [Helicobacter pylori J99]  ali follow..  7  1MNKKHRAFLGLIVGVLFFFSACQH----------------------RLHMGYYSEVTGDYLFNYNSTIVVAYDRSDAMTSYYINVIVYELQKLG-----FYNVFTQAEFPLDKAKNVIYVRIVRNIS 101
32 -11.600IDP05430 hypothetical protein lmo1265 [Listeria monocytogenes EGD-e] lmo1265 [Listeria monocytogenes EGD-e]  ali follow..  11  1....MKNTMIAGIVCLSILTACSSSESVKGTTSEEAENMDNLEKDAPIIIKATKKSEKTTKENVFPTDFYTMSDVQINSIEKDTT---GKLSENMTIKVLEYSVEIDGYKNMEKGEEYTLFLEKNPD 166
33 -11.600IDP00404 gene: virG; needle complex outer membrane lipoprotein precursor YPCD1.48 [Yersinia pestis CO92]  ali follow..  14  1....MSRIIA--LIISFLLVGCATPPMPAQRIVGEVRMSRPLSRIAHIDVSMFGLYEGKQRTHFETGNLPLFFSIKL------NPAQRGEGELYLRSTLSFPERGVQAVAQQKLTGKNKVVLQMIPK 119
34 -11.600IDP90095 ZZZ_0011 [Escherichia coli 042]  ali follow..  8  1.LMTIKCLLLAVMVCPFFITACSDKYSEQDRVQAINNADAPFGAGLQISSDTQLNSLNEISNSCALLFLQASDKNTLQDIMNNPVLIKQFFIGTGKVDGILKVDKYVAMPGQEITLHIDRNEGTK.. 127
35 -11.500IDP91374 outermembrane lipoprotein [Vibrio vulnificus CMCP6] VV1_1919 [Vibrio vulnificus CMCP6]  ali follow..  18  1....MKN-IGLLLLASLFLAGCTTPTHLPLSGSQAIEIRIDDQFNPK-----HCQYLGTVTGNEGHWYSYLFFSNDTMMQGAVNDLKNNAKELDDTIFVIAPQAFVTSFSLLGTAYR.......... 108
36 -11.400IDP05554 hypothetical protein CD3669 [Clostridium difficile 630] CD3669 [Peptoclostridium difficile 630]  ali follow..  13  1MKNKKIMLVLSILSISIFAVGCTNAQNGDVDKTDLIENKVDLNKIDENTLFEELQKLKVVPESAKLNSFTTKDIDGVKTGILDVSSDFTKSNLGSDAETLMLDSVARTYIKNMNVEQIKITVDGSN. 176
37 -11.400IDP02672 hypothetical protein FTT1602 [Francisella tularensis subsp. tularensis SCHU S4] FTT1602 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  12  1....MKKQLISITTALLVLSACGQTGPPDEDKLNSGSTLAKSGSSIMVKQNQQNNSTSTSDNQSDTSTKVDNDPTAPVRNNNPTTSELFEGENNFNYNNNIQNSQNAG-P................. 112
38 -11.300IDP05507 putative lipoprotein [Bacillus anthracis str. Ames] BA_5374 [Bacillus anthracis str. Ames]  ali follow..  7  1.MRKLGLITALFALLFSSFTGCDNSPLDKKVKEEAKRTEKEKGPKLTKMSTESFNQSISQGAKKRALAMDGIIKSAAVNSNLDLYIAVIPEHHERFGLKPLRKKLQKQLSDEHPTFDVRVSTDKK.. 124
39 -11.300IDP04091 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_1278 [Clostridium perfringens ATCC 13124]  ali follow..  14  1.MKKITKIFLITLCFSLLLISCSKEKPSLNYHTKNLSELVSKNNIKIRLLDMNIIVDNEDVRIIDDLLKSLKDSNFINEEALPNKPLYKDLNSEKYVIDIYGDDLITLYPWDSDVRKDYLSLKDIPN 139
40 -11.200IDP05451 putative lipoprotein [Bacillus anthracis str. Ames] BA_0580 [Bacillus anthracis str. Ames]  ali follow..  14  1....MKKIGTMLLFS-ILIAGCTQAQPDLKKPK----KEAIATSSTQVNAPSFFHLSVLKDVNWEETPSFIQEKIPLKGIEEKIAMADSPIIANEKNEIMW.......................... 92
41 -11.100IDP04240 extracellular solute-binding protein [Clostridium perfringens ATCC 13124] CPF_1077 [Clostridium perfringens ATCC 13124]  ali follow..  11  1.MIKRKKILSGIVCSSLILTGCGNSKEEESKETVNLTWYVIGDEPADNDIVEEEVNKYLKDKINATVDIKHIPFGDYTKKMS--------SNSGEPYDLAFTCSWAFPYLEYARKGAFL........ 116
42 -10.900IDP05503 putative lipoprotein [Bacillus anthracis str. Ames] BA_4863 [Bacillus anthracis str. Ames]  ali follow..  11  1....MKRALFFFISI-FFLGSCSIWYVTSSESKSWTGQYKGHIKDDSEDGMFTFRYKGGDGNTEFKNLEIAINGAFSTMTQTSENHKGAKIEMKSEIVIKWDDKYEEKMVLKRK............. 124
43 -10.800IDP05485 putative lipoprotein [Bacillus anthracis str. Ames] BA_3234 [Bacillus anthracis str. Ames]  ali follow..  10  1..MNMKGSVVFIAIVIFIIAGCSNMIGNEDQTDDTYEDLKVVTDNKQVQQVKKILNDAHFENKKVQIWVIPNKDKIEIIAGNSQYVQLEGKNAATLFQIITGEKLVE.................... 141
44 -10.700IDP05486 putative lipoprotein [Bacillus anthracis str. Ames] BA_4573 [Bacillus anthracis str. Ames]  ali follow..  21  1.MRAFFRGIGPFLIVVLLLVGCQSEENKIEQKATTTKAEEKKEEEKSIQDVMDKFVRTTNEKNLAEHIELFSKKMP................................................... 79
45 -10.500IDP05029 putative lipoprotein [Bacillus anthracis str. Ames] BA_0864 [Bacillus anthracis str. Ames]  ali follow..  14  1....MKKLYSLMLLTLLFLSACSNSAQPKEENDVQSIKDVTVKIPETIFTSSKKNETINEDEMKRSIKTYLDYSGELYENTVPLSSAMSDEKVTES............................... 94
46 -10.500IDP04565 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_1805 [Clostridium perfringens ATCC 13124]  ali follow..  24  1.MIKKIVVAVGLAFSLSFLVGCGNKS..................................................................................................... 25
47 -10.400IDP05515 putative lipoprotein [Clostridium difficile 630] CD1687 [Peptoclostridium difficile 630]  ali follow..  12  4IVKKSISLMIILTIFIFMLTACEKDEQPDSVDIQT-NEIKIDEGNAKVLNIGKSEIINIDEGDKVDTSTKVENNSTFNISNVELIYNEYD-ENKKII---------------SSDSKALLDMTLMP. 115
48 -10.300IDP05504 gene: modA; putative molybdenum ABC transporter,substrate-binding protein [Clostridium difficile 630] CD0869 [Peptoclostridium difficile 630]  ali follow..  18  1.MKKILGILGLVACLTLGTVGCNSNEDKKDNGKQEKTTKSSDSVELNISAAASLK---EAMAKIEEEYKKVDSNVKLTVNYGASGSLQQQIEQGAPCDLFISAG....................... 100
49 -10.200IDP05440 hypothetical protein BA_3272 [Bacillus anthracis str. Ames] BA_3272 [Bacillus anthracis str. Ames]  ali follow..  19  1..MGMKKLILAGALGIAALSGTNVPGLELTKASAASIESNFSTLEGRVVEVDNGVIVVKSKQYEEPVSVYIDSL--------------SNVKVGDEVKA............................ 83
50 -10.100IDP04378 extracellular solute-binding protein [Clostridium perfringens ATCC 13124] CPF_2335 [Clostridium perfringens ATCC 13124]  ali follow..  11  1.MLKFKKTACAMLTTSVALTGCGADKTANAG----------EGETVKLTWYTIGQTPKDLDMVQEKANEYLKEKINATIDDYTQKMGV--INSGEPYDLAFTCSWANPYLENARKGAFLLLETKGKE 130
51 -10.100IDP91483 putative lipoprotein VirG [Vibrio parahaemolyticus RIMD 2210633] VP1700 [Vibrio parahaemolyticus RIMD 2210633]  ali follow..  12  1....MKSSKWAGLIGLMLLTGCAQSVGTSQPF----------SVQSQANVYGWISVEGYHPPVSTYIEVE------MCQDFENQCLTVASQQQGVQLPVQYSFLIA---PIQAGKGEMKVIGKLY.. 103
52 -10.000IDP04329 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_1466 [Clostridium perfringens ATCC 13124]  ali follow..  11  1.MLKNKKLLGGIIGTSSILAGCGSGGSASSSDGEGEKPVNLVWYVIGKPQNDGELVEEEVNKYIKDKINATVDIKHIDFGDYSQKMNV--ANSGEEYDLAFTCSWAFPYLDNARKGAFLLIDSHGKD 133
53 -9.970IDP04063 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_0514 [Clostridium perfringens ATCC 13124]  ali follow..  17  1..MNKRKIVASILTTSLLLVGCVGSNNKANTSSNDSKVQESVENQSDFNDLRTYVGKTYNEVAGKKVIVSSSYSTRMFNYNANLILELDDSKNISAVSVHFKGIEPENILENIK............. 129
54 -9.920IDP05672 hypothetical protein lmo0778 [Listeria monocytogenes EGD-e] lmo0778 [Listeria monocytogenes EGD-e]  ali follow..  13  1....MKKKWLLLILSVIVLCAIIFGIKWLLYRDNLVEMMQV--DDTLYIVSYEPAKQEDALEKIGEIEHRIRHYRI-----PNKNFTSNYLSEGTEL.............................. 86
55 -9.740IDP06529 gene: acm; collagen-binding MSCRAMM Acm (Fms8) [Enterococcus faecium DO] AFK59905 [Enterococcus faecium DO]  ali follow..  10  1.MKKCRNIILSMLFIITNITSLHVYADAGRDISSNVTSLTVDPDGGNIKVKFSFDEKKQNIQPGDYLWINWPSEGNIRGEQKEIPLMIENKNVGDSAQVVFNENIKNLDSVEGWGQ........... 130
56 -9.710IDP05380 gene: gerKC; spore germination protein GerKC [Bacillus anthracis str. Ames] BA_0633 [Bacillus anthracis str. Ames]  ali follow..  11  1.MFKKRVKLLFILCTSAFLSGCWDQEPLREARLAYSIGSDITEENKLQQTIELVKSSSGEQASFENEIHSATGHNIRDTSDALKKNVTGNIRYFKYGVQLLGTKILKK................... 107
57 -9.680IDP92694 TpgX protein [Staphylococcus aureus subsp. aureus ST398] YP_005735174 [Staphylococcus aureus subsp. aureus ST398]  ali follow..  15  1....MKKLVTGLLALSLFLAACGQDSDQQKDSNKEKDDKAKTEQQDKKTNDSSKDKKDNKDNSKDVNKDNKDNSANDNQQQSNSNATNNDQNQTNN............................... 92
58 -9.670IDP05094 hypothetical protein BA_3160 [Bacillus anthracis str. Ames] BA_3160 [Bacillus anthracis str. Ames]  ali follow..  10  1MLSKKAKTMVIAIPLATVIGGYSAFNSHFSPVAEATSDLNQMINEADLVVIGEYEGLDSKWNMARNPSNPSEEDKENYVEGHLYNFNISETIKGV................................ 112
59 -9.640IDP93894 lipoprotein [Yersinia enterocolitica subsp. enterocolitica 8081] YP_001005558 [Yersinia enterocolitica subsp. enterocolitica 8081]  ali follow..  12  1....MKLTKISLLLAASVLAGCATAPKPIYHWDNYQSTVYEYYKSDA----------EQQIAALKESIEKSRAQGLPVPPGLHAHLGMLYGNTGHTDLA---NTEKSAFPESTPFMDFLMSKDKGAF 117
60 -9.570IDP91964 ABC transporter, substrate-binding protein [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100007935 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  14  1....MKFSAVLLTASLAVLAACGSKNTASSPDYKLEGVTFPLQEKKTLKFMTASSPLSPKDPNEKLILQRLEKETGVHIDWTNYQSDFAEISSGDLPDAIHNDGASDVDLMNWAKKGVIIPVKYMPN 138
61 -9.560IDP91435 DNA uptake lipoprotein [Vibrio vulnificus CMCP6] VV1_0485 [Vibrio vulnificus CMCP6]  ali follow..  14  1....MKHHTLAGLLAVSVLFGCSSSEQIVPDVPPAQTSLQGGNWLTAIEKLEALDSRYPFGAYSEQVQLDLIYAYYKNDDLALGLATISRF--------------TRLNPTHEKMDWV......... 106
62 -9.540IDP05365 hypothetical protein BA_2909 [Bacillus anthracis str. Ames] BA_2909 [Bacillus anthracis str. Ames]  ali follow..  19  1.MKYMHRNGVVMLTIFLCITACSSGER.................................................................................................... 26
63 -9.510IDP06182 hypothetical protein jhp1453 [Helicobacter pylori J99] NP_224171 [Helicobacter pylori J99]  ali follow..  11  1....MR--VLLFFILLLWFKGCGYKPIATYAQNALGDSV-------YVKLIVNLPNPENSVEFKDLMNRLVVQRFQNRLASEKD----ADSIIIIEITNVTDTSITQNKEGFTTFYRATVSVNYT.. 108
64 -9.460IDP05525 putative sugar transporter, substrate-binding lipoprotein [Clostridium difficile 630] CD2550 [Peptoclostridium difficile 630]  ali follow..  10  8MLKKLCSLAMVAIMTTTLITGCSSGNGKDSKKDGEKEKLVL-----------MPPVENNMKEVWDPILDKFEEKNNC-------EVDLQIIPWDNYSEKFATAISAGEGP................. 100
65 -9.450IDP05558 hypothetical protein lmo1757 [Listeria monocytogenes EGD-e] lmo1757 [Listeria monocytogenes EGD-e]  ali follow..  14  1....MKKLIIAALGLTLVLSGCAPKLDSN--------DKVVQKDDSKAETGIMTKNQISSNYYKTVLPYKASKSRGLVVSNIYSRYDINELESG................................. 82
66 -9.420IDP05586 putative lipoprotein [Bacillus anthracis str. Ames] BA_2746 [Bacillus anthracis str. Ames]  ali follow..  9  1....MKI-LIYILMVCFLITGCSIGKKDSPNEKSEQKNVSMKNNKPNEKAADHLASLAASVPGVNDATAVVVGKYAIVGIDVKAKLDRTRVES-------IKYSVAESLKNDPDGANAVVVADVD.. 120
67 -9.390IDP95127 pullulanase-specific type II secretion system outer membrane lipoprotein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] YP_002917879 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]  ali follow..  15  1....MRIPLIFPLCMVALLSGCQQKPASTL--SPAISSQAQLEQLSSVAAGTRYLKNKCNRSDLPADETIYRAAVNVGKARGWGNIDVATLS--QNSDRLYQQLLQDSTPEATQCSQF......... 110
68 -9.380IDP05034 conserved hypothetical protein [Bacillus anthracis str. Ames] BA_1274 [Bacillus anthracis str. Ames]  ali follow..  15  1....MNKKTIFFLLTCLLLVASTTYIICNKREQVP----MLVWEGQEYYVTNEPAKAEEVGQRLGEVTKKIETSEKPIKNSES-----NIVQEKTEV.............................. 85
69 -9.360IDP05702 hypothetical protein lmo2568 [Listeria monocytogenes EGD-e] lmo2568 [Listeria monocytogenes EGD-e]  ali follow..  8  1....MKKGLFGLLAAIFVLTMVVIEFSAPIGSAANTYYVTIKNDG-----------KEVTKSKFKGYSFRESCLDNQGNSHKVNFMSTTQLKKNKQYKIVVQDNELLVQAKEINSVPL-------AS 105
70 -9.350IDP05647 hypothetical protein CD3457 [Clostridium difficile 630] CD3457 [Peptoclostridium difficile 630]  ali follow..  9  9VKFNIKGIIYGVIALVFVGGFIFIPSMFVEKSKPIDYTVLQRNSIPEKILD------DKYTNEERALAAKIDNKIYIINKYGIEMDKIESVVEEGKRVKIKYKDKEDSFP................. 123
71 -9.290IDP05151 putative lipoprotein [Bacillus anthracis str. Ames] BA_0307 [Bacillus anthracis str. Ames]  ali follow..  10  1....MKKIALAVLSLGLLVSGCSAGADKD--------EKVVEKSGKAKEQVIVPNYSISDEYYKTTIPFEGGNARGLVVQGVSNRLDIDEFETG................................. 82
72 -9.270IDP05183 putative lipoprotein [Bacillus anthracis str. Ames] BA_5237 [Bacillus anthracis str. Ames]  ali follow..  12  1....MKRLSLVFILICLVSAGCAKDKEGEKLE-GVVGEKPKDTFRNVKFEEMKLEELEKKSKEVDGFLIMKAH-------QEASTDQYKNVFSSLKKPVFFIGLQDKSYSI................ 110
73 -9.200IDP91126 extracellular solute-binding protein, putative [Staphylococcus aureus subsp. aureus NCTC 8325] SAOUHSC_00176 [Staphylococcus aureus subsp. aureus NCTC 8325]  ali follow..  14  1.MSKILKCITLAVVMLLIVTACGPNRSKEDIDKALNKDNSKDKPNQLTM-----VDGDKQMAFYKKITDQYTKKTGI-------KVKLVNIGQNDQLENISLDAPAGKGP................. 98
74 -9.200IDP06544 extracellular solute-binding protein, family 1 [Enterococcus faecium DO] EAN09718 [Enterococcus faecium DO]  ali follow..  15  1....MKKVTTCLLATGFLLTACGESQSSNESQQTTIQFMHSSVEQERLSVINELVADFEKEN-------DIKIKQVPVEESAFNTKIVTLARSGKLPEVMEDGKSYIAAPISGWVQGIWYDKEKEPE 169
75 -9.180IDP04058 ABC transporter, solute-binding protein [Clostridium perfringens ATCC 13124] CPF_0556 [Clostridium perfringens ATCC 13124]  ali follow..  13  1MKRKLVKMLTVACVTAIAFVGCGNKEEAPKD-NEKPSTEQAEGSGEKKVLEIAVFEGGFGKDYWDACIDAFEAE-----------------HPDVEVKM-------EANPKIGDIIRPKLSSENTPD 105
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. Discovering new genes with advanced homology detection. Trends Biotechnol. 2002 Aug;20(8):315-6.