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Query: IDP05699 hypothetical protein lmo2396 [Listeria monocytogenes EGD-e] lmo2396 [Listeria monocytogenes EGD-e], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MYKLVKIILALFLITTVFLPFSNVKAAPTDVVNIPDPVLNSGLKNIIGNPFLDEITEANMATITVADLSNMSGAPGYPVTGLIKDLTGLDKAVNMTKLYFSNQSQIKNLDKIKNLPNLKKIVAVTTGLNNISALGEMPALEEVELGGDYITDFTPLLEKENLTSFSYNSYAWSNPAYHQINNDEFKNFTKLKSLVKLDLTWNNITDLSPLTENDHITNLNLNYNQFTNVAPIATMKNLKVLYLNNNNLTSIDALNTLRGLTIAYADNNNITDLSNLKNFFEAMVAQGDYEGLQINNQTITLPTINIKKGATANSTNPTLDINGQKMPVSNISNDGTVSADNKTVSFANLPIGNKTVTYKAKFTATSSKGVPLSYSINVSQPINVSEQTDSTVSVFYQDENGNELAPTETLSGKSGEDYQTTEKTIANYQLKEIEGQASGQFTDTDSTVTYVYEKADGAPVTVKYVDADGNDLATSDTLNGKIDAPYQTSAKSLSGWTVKTTPNNATGVFTNSKQTVTYVYEKADGAPVTVKYVDGDGNELATSDTLNGKIDAPYQTTAKSLSGWTVKTTPNNATGVFTNSKQTVTYVYEKADGAPVTVKYVDADGNELATSDTLNGKIDAPYQTTAKSLSGWTVKTTPNNATGVFTNSKQTVTYVYEKADGAPVTVKYVDADGNELATSDTLNGKIDAPYQTTAESLSGWTVKTTPNNATGVFTNSKQTVTYVYEKADGAPVTVKYVDGDGNELATSDTLNGKIDAPYQTTAKSLSGWTVKTTPNNATGVFTNSKQTVTYVYEKADGAPVTVKYVDADGNELATPDTLNGKLDTSYAVTAKNLSGWKLTATPSNANGVFTTDAQTVTFVYAKQEDDPKKDDKTPNNTKPDTNKTPIKINENKPTASKVTTIKRQTKLPKTGDTQQDSILFGLVGTCFVLLGIYSISKKNSLast
1 -166.000IDP05699 hypothetical protein lmo2396 [Listeria monocytogenes EGD-e] lmo2396 [Listeria monocytogenes EGD-e]  ali  100  1MYKLVKIILALFLITTVFLPFSNVKAAPTDVVNIPDPVLNSGLKNIIGNPFLDEITEANMATITVADLSNMSGAPGYPVTGLIKDLTGLDKAVNMTKLYFSNQSQIKNLDKIKNLPNLKKIVAVTTGLNNISALGEMPALEEVELGGDYITDFTPLLEKENLTSFSYNSYAWSNPAYHQINNDEFKNFTKLKSLVKLDLTWNNITDLSPLTENDHITNLNLNYNQFTNVAPIATMKNLKVLYLNNNNLTSIDALNTLRGLTIAYADNNNITDLSNLKNFFEAMVAQGDYEGLQINNQTITLPTINIKKGATANSTNPTLDINGQKMPVSNISNDGTVSADNKTVSFANLPIGNKTVTYKAKFTATSSKGVPLSYSINVSQPINVSEQTDSTVSVFYQDENGNELAPTETLSGKSGEDYQTTEKTIANYQLKEIEGQASGQFTDTDSTVTYVYEKADGAPVTVKYVDADGNDLATSDTLNGKIDAPYQTSAKSLSGWTVKTTPNNATGVFTNSKQTVTYVYEKADGAPVTVKYVDGDGNELATSDTLNGKIDAPYQTTAKSLSGWTVKTTPNNATGVFTNSKQTVTYVYEKADGAPVTVKYVDADGNELATSDTLNGKIDAPYQTTAKSLSGWTVKTTPNNATGVFTNSKQTVTYVYEKADGAPVTVKYVDADGNELATSDTLNGKIDAPYQTTAESLSGWTVKTTPNNATGVFTNSKQTVTYVYEKADGAPVTVKYVDGDGNELATSDTLNGKIDAPYQTTAKSLSGWTVKTTPNNATGVFTNSKQTVTYVYEKADGAPVTVKYVDADGNELATPDTLNGKLDTSYAVTAKNLSGWKLTATPSNANGVFTTDAQTVTFVYAKQEDDPKKDDKTPNNTKPDTNKTPIKINENKPTASKVTTIKRQTKLPKTGDTQQDSILFGLVGTCFVLLGIYSISKKNS 940
2 -82.400IDP01916 hypothetical protein lmo0327 [Listeria monocytogenes EGD-e] lmo0327 [Listeria monocytogenes EGD-e]  ali follow..  23  1MLKKIIALIALVVIINTVSFTSVSASTPTWLEQTMNNN-EPFIKEIETETG-ANITQTDLEAITALRVTGASDIP-----------ANIDMLTHLTLLKA-VQGTISSVNSVGNLKELKILNLNTNHLSNFPTVYQLPKLEELQLNDGTIEEIPA-NMASHLKFLTVNNNRLVKVPTIIFSTNWSN--SSTGELDLFTTGNQIVTDIPA-GGPITVKHEDTKGQELAPPVILNGKDG-DPYTTTQKTFPGYTLVATPANQNGAFTLNPATVNYVYSANDYKLTSYTTTAAVFPGYTLVATPTNATGTFGSSNITVHYVYQANGYQLTSTFKDQQGKTISPDDVDTKT-DPYTTTAKTIPGYTLVTTPTNNQGNFGTSDITVDYVYKAEDYTLTSTYKDAQGKELKQPVVDSKKIQDNYSTSAATIPGYTLVATPANETGTFHTSDVTVNYVYKL-TDLKLTSTYKDAQGTELKPPVVDSKTIQDNYATTAAVIPGYTLVATPANQSGTFGSTDIQVNYVYQKANDYTLTSTYKDAQGKELKTPVIDSQHINDTYTTTGATIPGYTLVAAPANQSGTFGAANVTVNYVYKADNEYTLTSTFKNVQGTELKPAIVKTYNINDPYTATALNIPGYTLTTTPANEKGVFGASDETVNYVYKA-NDYTLTTTYKDANGKELQAPKAKTYHIQDTYKTTAAVIPGYTLVAIPKNDQGTFGANNVTVNYVYQT-NDYTLTATFKDAQGNELKATEVDAYHIHDTYTSKAAVIPGYTLEKTPTNETGTFNASDIQVNYVYKAND-YQLTSTFKDQQGNEIALPDAKTYHIHEAYTTKARLIPGYSLVAAPKNQIGAFGTSDVTVNYVYKKDAIIKPITPAKPTILTIKTPASKV-----------IKTKVVKQTLPKTGDDDAGLLNLLRLIGLVLILGVFLAVGSKK 1346
3 -74.800IDP05663 hypothetical protein lmo0333 [Listeria monocytogenes EGD-e] lmo0333 [Listeria monocytogenes EGD-e]  ali follow..  19  469..TTIGDLKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINNVIRTVGKMTELPSLKEFYAQNNSISDISMIHDMPNLRKVNLITNIGTFDNLPKLQSLDVHS-NRITSTSVIHDLPSLETFNAQTNLITNIGTMDNLPDLTYVNLSFNRIPSLAPIGDLPNLETLIVSDNKLRILDLQNNYLNYTSSLSDLTNLTELNLRNNVYDDISGLSTLSRLIYLNLDSNKIEDISALSNLTNLQELTLENNKIENISALSDLENLNKLVVSKNKIIDISPVANMVNRGAIVTASNQTYTLPTVLSYQSSFTITVTLNSINSDGVAGTPTAIIVHVEKEKIATISTNTAQQYEKYAKINETQFLKDVHASINASPTTAVLESDFETVVKLDVPGTYTVTITATNEDGGVSAPKEVSVIVRKIP-DVNLNKAGDYTVTLNATNEDGVKATPVEVIVHVQQGERTADATISYDKFTEAKFLEDIHATSSDGQSSTVITSNFQSYTVTLNAVNEDGIALKADAEVSYAKNEAVTESDFFKDVHLEGTEAPSTAKATSNFDSVVDRS--KTGDYTVTINATNEDGAVSTPIEVIVHIEAESATANAEVKYNKHEQTDERREANVEIKTDFAEKVDINKVGTYTVTLTATNEDGQAAN-PVEVSVIVSDAAAEKVNVKYVDENGSEISAAETLTGNLDETFSIDAKSIAGYKC---DATLSGVFSTVEQTVVFHYKAIKPGVVTIKYEDTNGKAVDEDKQITGEVGDDFEAEAQTVSGYSCRA---IASGKITEEPQTITFTYSTAKSGEITVQYVDESGKKLADSKKVTGNIDDSYSVEAKAIEGYSVVG-DDSAKGVFTEKSQTVTFKYKKNTQVSKDDPKVKGKTN-------------QPSSTDTKLKVDNNSLPATGDTENMILVLIGFNMLIVASIFLFRKPKTN 1777
4 -67.300IDP01745 hypothetical protein lmo2821 [Listeria monocytogenes EGD-e] lmo2821 [Listeria monocytogenes EGD-e]  ali follow..  25  8.IASLVSLVSNPLLTFAATNDVIDNTTESFNDWFPDDNFASEVAAAFEMQATDTISEEQLATLTSLDCHN----------SSITDMTGIEKLTGLTKLICTS-NNITTLD-LSQNTNLTYLACDSNKLTNLD-VTPLTKLTYLNCDTNKLTKLD-VSQNPLLTYLNCARNTLTEID-----------VSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITELD-VSQNKLLNRLNCDTNNITKLD-LNQNIQLTFLDCSSNKLTEID-VTPLTQLTYFDCSVNPLTELD-VSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELD-------------------------------------------------------------------------VTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTELDVSHNTKLKSLSCVNAHIQDFSSVGKIPALNNNFEAEGQ--------------TITMPKETLTNNSLTIAVSPDLLDQFGNPMNIEPGDGGVYDQATNTITWENLSTDNPAVTYTFTSENGAIVGTVTTPFEAPQPIKGEDVTVHYLDDKGEKLADDEVLSGNLDDPYTSSAKDIPDYTLTTTPDNATGTFTTTSQSVTYVYTKNAAEPVTVNYVDDTGKTLSPSEILNGNVGDTYNATAKQIDGYTLSAEPTNATGQFTSSAQTVNYIYTKNPKGVVEIHYVDEDNKQLNSTTEISGTIGDNYTTEPKTIEGYTLTTTPGNATGTFTTGSQTVTYVYTKNIAEPITVNYVDANGKTLAPSETLNGNVGDTYKATAKQIDGYTLSAEPTNATGQFTSSAQTVNYIYTKNTNTDQPLPTKKPTNTTPTKPSNL---------KTTEVKKASDTLPKTGDSAPWKSAL--LGVFLSSTALVIWKKKK. 851
5 -60.500IDP05555 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo1413 [Listeria monocytogenes EGD-e]  ali follow..  25  1.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MKHAKKSLFTFIIFMTILSITFNPFSAKMLNLPAPQVDQLYIGDDYITGKLQQEVPMHYPG-NAAYVLFNNKQYNITDYTVENDVNFRLKLPKTLEAGDTLNYFITGNVLDPVAYPGQESYKLAGPFSPIEKANIQVNYVDETNQTLATSDTLSGKLGETYTTSPKAIDGYQVKETPTNATGTYTTNTETIQINYVYEKTAVSVEYINEATNESIAPTETLSGKIGTTFQAEVKEIDGYELSQVPSNQSGTYTDQTQSVIFKYKKIVAKDVTVTYKDTKGNQLADPVILKGDIGSTFETEAKSFKGYKLTKTPSNHSSVFTSDSQEVEYVYSKDDAVITPPVTPVNPDKPIINPVKPVNPATSKTVNQTGKTSTALQLPKTGDSENNLPLIIGVSLLISGVYIFTTRRKRV 438
6 -57.600IDP05561 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo2026 [Listeria monocytogenes EGD-e]  ali follow..  21  2...................................................KKKFVYLLLLVLFMTVLFQMLEAQAASTSWIEQELDGNEPFIAETEKILSKNRQDITLADLETIQKIH------FGADSINKISDYKNLTALEANYGTITEVPEVGSLKELVTLNVDENNLQEFP---------MVIFQLPKLEVLYISRGNITEIPTITTLSHLKVLDVSNQKLVTIDSILTTNWKAMHDGKLGMSLAGNQIASDIPANYLDNFNSGGNMLE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FYDNPTIDYLQKQDQLTYTGGTIEVPLNTDFKQLTPDKTNLGLKSNIPLFSQHEFMYYDDGTSANILTNGVATDVGDGYITIKSTLSTNSNPFAKVRVPIKVT-APLKGADVTVQYLDSNGDTLATPDILSGNEGDAYASTPKTIDGYTLTQTPTNAQGTFTEEPQTVIYVYTKVAAAPVTVKYLNEEGKILTASDNLTGNVDDPYQTKAKEFAGYTLDELPTNASGVFKTNAQTVTYVYKTIPASDSTMNVGDTWSAKDN-FDSAVDSLGVAVPFDEVKVDGSVDTTKAGVYPVTYSFAGDSVTIKVTVKATVVPAPPITPIKPVVPAPANPNTPSTQKATHQEQPIVAGNLKLPTTGDNLWDSVLYSIFGFITVCLSFVLFFRLKK 622
7 -56.300IDP05668 hypothetical protein lmo0576 [Listeria monocytogenes EGD-e] lmo0576 [Listeria monocytogenes EGD-e]  ali follow..  22  8.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CVFAVILFFTGFLFGNSPVNAAETDTSNVTYNYIDISTLTETQKNSIIKGNPNETLTNDYENYSFVYQKNTSEPTTNT--DNTSDNNKNQNGTLLKAGDVGPNSYLIILGFILIGSGIGLLTLKKRYARQLLVFLVVVEKGTVTVNYQDEQGNSLATSETLKGDIGQPYQTATKNIEGYQLKEVNGNTTGTFTEKAQVVTYVYQKVPVATVTVKYLDQDGNKIHDPQTISGNIGEPYDASTDQIDGYTLTKLPNNANGIFTNQAIEVTYIYTKEAQDKITIKFVDSNGDPFVLTDLTTYKNGDLVPIY-PNLDQYHMRLNYNQQIYNQGEAVPDIVIPAKEGEPERMTFNILDDQGKQIPYV---ISQNADFSSTGIERWENYQS--IPTNREGTLTSEDVVVTYQILVYGVLIPE....................................................................... 486
8 -55.600IDP05656 hypothetical protein lmo0171 [Listeria monocytogenes EGD-e] lmo0171 [Listeria monocytogenes EGD-e]  ali follow..  16  81.......NTPKNNLKSTSENSKTYAEL------FPDVNLAKIIAKNISGTEDIN------AEVSEAELQTITNLV---TNQNITSLTGIEHLTALENINVNN-NELTTIDSLFNIPTLKSISANNNKITGFSLVKTLPELHTLEVLGNAITELD-IENQPNLVTLSADELELKKL--------TLKNLSQLNGLSSISIDWGDLESVT-LMNLPEIISVDISGNYLSDDIHLENLPAVKNLDISSNELTRLPKINDFPLLTTINVRSNKIDRLSKLVDVPKLATLNADKQAVTLSKTIAAGNFTIPNNVENLAGQMVTPKIISNN----------------------------------------------------------------------------------------------TYSDQSIAWASGELSGLSKVSYTFDEVINSPAIAGKYTGTVNQPIEVKAVPVIVADKSVS-------PVNAKDEATFLQDIRASASENAQITSDYSEVVDFATPGDYTVTLHAKNEFDL---------------------------------------KADPVTVVVHINDIQKPQVAVNSNDIS------------------------------------------EVGTELTSEVLLAKSGAVVTDLYDEAIKMEVDLSEVDSSKLGTYEATIIAKSKSGASSDPIKLSVKIVDTEKPIIQINNEKGSELTEGQIIDQVGITATDNYDQDLNIHMDLSKVDTSKPGSYEVTIYTEDSSGNRSETVTITVKVPEARIGKITIQYMDSENNELAESNTITGEVGETYETLAKEIEGYTLKENPANSSGVFEETRQTIQYIYVKDIINPEFPVYSENNVTPELPSNTPSKSVKKQSKAYSKINQMPMNLPETGDSTNLLFIF--MGVLLLAGLTLSKAKRKN 831
9 -51.200IDP05423 gene: inlH; internalin H [Listeria monocytogenes EGD-e] lmo0263 [Listeria monocytogenes EGD-e]  ali follow..  18  1MKKRWN------SVFKLVLMVTAILGLSLYVTTSQGVEVPTAINVIFPDPALANAIKIAAGKSNVTDTVTQADLDGITTLTGVTTIEGVQYLNNLIGLELKD-NQITDLTPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQIT----------NISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITNQPVFYQNNLVVPNVVKGPSGAPIA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 290
10 -50.700IDP05076 hypothetical protein lmo0801 [Listeria monocytogenes EGD-e] lmo0801 [Listeria monocytogenes EGD-e]  ali follow..  21  1MKKLCTVILFLTLLLNGFVPNAHAKTESPSADNNLQVAPPAAIKDLFPDPAMKSLNLKKLNKKSTSDTVTQTELNSLTGSKGIKSIEGVEYLQNITELDVEK-NQITDIAPVANLKKLTTLLINTNQITDISPVADLANLTTFYCGNNPISDISAVQNLTKLSIFNCYTANVE----------DISPVKNLVNLKTLSLGSNNIHDISDIEKLTALEYLSFSNNPVENPEVIGNLTNLNTLWLYNAQIRNIDFTANLPKLKSVYLYNNQISNISEVSNWANIEYLELNNNQITDITPVANLTTLKTLKLNDQIITN................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 315
11 -49.900IDP05666 gene: inlA; internalin A [Listeria monocytogenes EGD-e] lmo0433 [Listeria monocytogenes EGD-e]  ali follow..  18  45..NQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLVDINQIADITPLANLTNLTGLTLFN-NQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANLTTLERLDISSNKVSDLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKAIFNVKFHVDGKETTKEVEAGNLLT----------------------AKPVKEGHTFVGWFDAQTGGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQEP---TAPTKEGYTFKGWYDAKTGG-----DKWDFATSKMPAKNITL-------------------------------------------YAQYSANSYTATF---------------DVDGKSTTQAVDYQGLLKEP---KAPTKAGYTFKGWYDEKTDG-----KKWDFATDKMPANDITL---------------------------------------------------------YAQFTKNPVAP---PTTGGNTPPTTNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPY---------------------------------------------NSKEASLPTTGDSDNALYLL--LGLLAVGTAMALTKKARA 798
12 -49.700IDP05553 hypothetical protein lmo1136 [Listeria monocytogenes EGD-e] lmo1136 [Listeria monocytogenes EGD-e]  ali follow..  13  2.......KKTIKITTSLLLSFACVFSIGDFTKPHTVEAEPKPVNEIFTDPKLAQVVADWLKLPAATSSVTQTQLNTIKALKGVQSLEGVEYLKNLTQVFGYG-NQVSDLGPLSNLTKLEVIQMPRNQISDLTPIANLTALMSLDFEFNNLQTIEPIKNLTNMLELNVSANPIS----------DINAVKNMTQLEFLTLRDCEVSDLSPVENLSNMLMFWAGRNNISDITPLKNMSKLLGLSLFGNQIKDVSVIKNLTSLEDFDIKANQVSDISSLATSTTLETLTLSFNQIIDISPLKNLTNLTRLELENQTRA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 309
13 -49.700IDP91680 INLB_LISMO [Listeria monocytogenes]  ali follow..  18  12..CLISGLAIIFSLWIIIGNGAKVQAETITV--------PTPIKQIFSDDAFAETIKDNLKKKSVTDAVTQNELNSIDQISDIKSVQGIQYLPNVTKLFLNG-NKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKIT----------DITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNINHQSNLVVPNTVKNTDGSLVTPEIISDDGDYEKPNVKWHLPEFTNEVSFIFYQPVTIGKAKARFH................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 312
14 -49.100IDP05755 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo0732 [Listeria monocytogenes EGD-e]  ali follow..  20  1..................................................................................MKKAFLCLSAIVLSLNFVWINPITGSASKETTKETNQQVNLKNNVTDIVEDLGGQTWLNEVNRQLAPKT--LTFEDLAKITTISLNNRSLTG-----------PEIKNLVSLQRLYLFSNKLSG-AELGELTKLTELRLDYNELSGKIP-DGLGNISEIALQNNRLVGLSLYENRTGKNEVNVSGNQVTINSQQS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PSVYSAYTFVYPSSTPEYSGHIKANNSFISNLTNDMNLTPFL--------------------------------------------KNSPTFINLQVVYMFNSELFDGHDVTITDTNDGRVLYDGTLTSDISIPLTNFKSGV---HVINVMLDNAPNNPQNQTTFLIDILPVPAHDLTVNYVDEAGAEIHEPQTVSGNVGDDYDVTTPEIDKYELEQMPTNGLGTLSSEAQTVTYVYKKVNGAPVTVKYEDQNGVEITTSDVLTGKLDATYQSKAKEIAGFTLSKLPANASGIFETNPQTVTYVYQAVPAAHDSTIYVEDKWSAEDNFDSAVNSVGAAVSFDDLEVEGTVDTTKAGVYPVTYSFAGESVTINVTVKPTNPDQPDIQAAPGEHQASTDKSEALKVTVAQKEQPTVAGNLKLPTTGDNLWDSVLYSVFGLIAVCVAFSLFKQKHS 638
15 -48.900IDP02569 gene: inlE; internalin E [Listeria monocytogenes EGD-e] lmo0264 [Listeria monocytogenes EGD-e]  ali follow..  18  1....MKRNKTALRILVTLAVVLAITFWVGMSSKEVQAAVPTPINEIFTDPVLTDNVKTLLGKADVTDEVTQTDLDSVTHLAGITTIEGLQYLTNLSELELID-NQVTDLNPLTNLTKITELRLSGNPLKDVSALAGLKNLKTMDLIYTDITDVTPLAGLSNLQVLNLDINQIT----------DITPLAGLSNLQFLSFGSTQVSDLTPLANLSKLTTLNAMNSKVSDVSPLTGLSNLTEVYLEENQISDVSPLAKLPNLSIVTLTNQTITNQPVFYQNKPIVPNVVTGLSGELIA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 288
16 -47.700IDP00034 internalin, putative BA_1346 [Bacillus anthracis str. Ames]  ali follow..  12  9..LDYSALKYMPNLKSLTVANAKIKDPSFFANLKQLNHLGNEFSDVTPLVKMDHLDSLDLSNNKITNVAPLIEMKNVKSLNQIEDVTALAKMEQLDYLNLAN-NKITNVAPLSALKNVTYLTLAGNQIEDIKPLYSL-PLTDLVLTRNKVKDLSGIEQMKQLEELWIGKNEIK----------DVTPLSKMTQLKQLHLPNNELKDITPLSSLVNLQKLDLEANYISDLTPASNLKKLVFLSFVANEIRDVRPVIELSKTAYINVQNQKVFLEETEVNKEVKVPIYEKDGKISTKIRLKGEGGTYSNDAVKWSTPG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 317
17 -46.800IDP01918 hypothetical protein lmo0514 [Listeria monocytogenes EGD-e] lmo0514 [Listeria monocytogenes EGD-e]  ali follow..  16  1MKKTICMFIMIYPSTAAHAEETNIVN-------IPDANLKTYLNGLLKQASDAPITKTQMNTIQTVTLSG----------STYTDLTGLEEAGNLVTLSLNN-TNIQTLEPIKNQTSLTYLTVGGDNVKLFVDLNGLVNLQSLSINGSEVTHFKTFNKLPKLTYLYAQNS---------MKITDISALASLPALTTLFLQFDGIDDFRPLNDFESFKNGNLKALATGRTNPRITLKSGKLDYNETNQTLYLPFSMMPKPLTSFDGTVAPFSKSTSASNTYLGFNDVALPSSRLSITDDGITVS---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GVTKEEFDNLDEIEYNARYDFPTGSYPTPPSMTSYTISSGTYDQYFDISHTLDLTADESFDYNQYDTTSEEQFLKD-----------------------------------VHAETDDGTAVKSDFDQ--------VVKLDVPGEYTVTLNAENAAGLKATPVTVKVTVHEKPV--------ITSDSQISYKKETTKSVDEFLKEIHGSVTGNAVLTSDFDKVVDLNTPGEYTVTLNAI------------NDRGQ---------------------------------------------------KADPVTVVVTVTTSDSGHVDPVPPTPQEETDQTIIPEPQSETTEDSVKEDQAKDGQAKSEEKAD-------------------------KTSLTTKENKVEKSEKTNQPKTKALPQTGDTNKTALPI--AGVMLSLAALLIFRKSKS 605
18 -46.500IDP00005 internalin, putative BA_0552 [Bacillus anthracis str. Ames]  ali follow..  10  261..ENVEPLVNLEKLDILELQNNRIADVTPLSQLKKVRTINNKISDIKPLYNVSSLRKLYVSNNKITDFTGIEQLNKLGTLNGLVNIEPISQMSGIVELNLEK-NDIKDITSLSKLTGLQSLNLEENYVSDVSSLSNLINLYELKLATNEIRDIRPIQELGKRIKIDAQRQKVFLTDGKKEGITDFSGLEFMTNVEELTLQNVNMKNAEFISSLRNLKSVDLSYNQIEDIKPLHSLEDLEKLNVSDNGIKNVPELFKMQKLKTLDLSNNKLDNADGIHQLENLDALLVNNNEINNLDEISKVSKLNKLEMMSNKVRDISPLASLKNLQWLNLSDNKIQDISTLSSMLDLLSLKLAGNEIRDVRPVIQLAQWI......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 753
19 -46.100IDP05548 hypothetical protein lmo0409 [Listeria monocytogenes EGD-e] lmo0409 [Listeria monocytogenes EGD-e]  ali follow..  14  9..KQITTIMTVVSLLIMVLGIQGNNDVKAAPQVAPP----ASINQIFPDADLAEGIRAELQKSSVTDVVTKEELESISQLKKIASIEGLEYLTNLKFLNLNG-NQITDLSPLSNLTKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRPLANLTQMYSLRLGGNSN---------ISDLNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAYSNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNLTSLGLQNNKISDISVLKNLTHVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPLANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTLIAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEENLIPEPTSPTKQGYTFDGWYDAETGGTKQMPANDLTLYAHFSVNSYQANF-DIDGVVTNEAVVYDTLLNEP---TTPTKQGYTFDGWYDAETGGNKWDFKTMKMFYAHFTINNYQANF-DIDGEVKNETIAYDTLLNEPTTPTKQTFDGWYDAETGGTKWDFKTKEMPANDVTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEP---TSPSKTGFTFEGWYDAEVGGTKWDFKTMKTLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTSQNNNITVTAGENTTELATAKLPKTGDNA-PWKTLFAGILLSSS........................................................................................................................................ 812
20 -45.800IDP05657 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo0175 [Listeria monocytogenes EGD-e]  ali follow..  18  2...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................FNKKKTIASLIVLSSLASQIALTPISALADTHDTNNIALLQNTNENVPYKYTST-LTFPTLTNQTQEDYKLEIKLALPSGMNYTDLQVSVGGEDITNQ--VGTTSFDNSTNTVTFKFDKKVKFDWKTSYSGEGGEAKIDSLVATATATSEDKAGNKSTSTGSLK-PKDISAPVVKAEETEITYSP---GSDVTEEQFLTDIHASVTDNYDSTISLTSNFTSAVNLAVDYSVNVQATDKAGNVSNTLNVTVHVSTPAPGANITVNHLDSNGNKIAESDTLTGVVNSNYQSESKKITGYTLETTPTNATGTFTDTPQTVDYIYKKDTVTPTPITVNPVEPVKPVNPVVNKPVTVKPANDNTNPSTTYSSLPTTGDTDQSKSSTIFGALLLLISAPLLLFKKK. 415
21 -45.400IDP01994 hypothetical protein lmo1290 [Listeria monocytogenes EGD-e] lmo1290 [Listeria monocytogenes EGD-e]  ali follow..  18  1MSVK-SNIVKIGVCFAVLAVPVSQTTLPVFAVNIPDSTFKAYLNGLLGQASTANITEAQMDSLTYITLAN----------INVTDLTGIEYAHNIKDLTINN-IHATNYNQISGLSNLERLRIMGADVTSIPNLSGLTNLTLLDLSHSAHDDLTKINTLPKVTSIDLSYN---------GAITDIMPLKTMPELKSLNIQFDGVHDYRGIEDFPKLNTLLAYSQTIGGKKLINSDIKSSKLTYNAENQTLYVPFSLMTERTVNYDGYVPDFVKSTASSDTYF.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 277
22 -44.200IDP05426 hypothetical protein lmo0610 [Listeria monocytogenes EGD-e] lmo0610 [Listeria monocytogenes EGD-e]  ali follow..  21  1MKKTISFSANVSAEENISIKAAQDVVN------IPDPALKSYLNGLLGQPSTSDITEAQMDTITDVTISN----------ASLTDLTGLDYAHNLTILHLTN-TGVTDYSLVANIPSLTNLNISGSNLTTIPDLNGLTNVTNLNLSSGKLDALTKFNKLPNLTFLNLDNNP---------SITDFMPLKSLPNLASLFIQFCGVNDFRGIDSFPKLTNLAAFGQNVGSAILINSTIKSSALNYNEANQTIFVPFTLMTERSMNFDGYLFTTNTASSSTYFTLNGVQISGSRLSIDDTGVTVSGIT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 300
23 -41.900IDP05549 hypothetical protein lmo0549 [Listeria monocytogenes EGD-e] lmo0549 [Listeria monocytogenes EGD-e]  ali follow..  17  1MKFNWKVVLLFVLIKSPELLDDKSSTLKNIADLFPDEGMAKTIANQLGRTENNNFQTPTKTDWKVDDVVTEVELNRMWYLATIGSIEGIQYLPNLYDVRLQFDKQCKDLSPFNGYSQLYRLNINNGNISDISPLTELSTLNDIDLGGNNISDLSLFPKLPNLEEISLERNNIS----------DVSPLAKFTKIKIFNLDENHITDLSSLTKMPNLQRLYVRYQTLDATKPKATIDPITSKITYSAEEMAKKPFYYTPLFPGVTYSWDENFPLNGSNSLVDFR................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 356
24 -39.300IDP02661 hypothetical protein lmo1289 [Listeria monocytogenes EGD-e] lmo1289 [Listeria monocytogenes EGD-e]  ali follow..  23  9MKIGVCSVMVLVPLSQTSLPSFAAEEIAQDVVNIPDPQLKKELNLYLNQAENADITEAQMATFRNITLN-----------SGIKDLTGIEYLKNITTLSIN--NINASYEPIQTLSSLEKLVINGENVNAIPDLSVLSNLTFLDLSRTNIDDFSKISNIPNLNKLDISNNK---------GITKISELNNLPSLQELRVSDCQITNFKGIEKFPNLTAFYGDGQLFGDSFETDGFKNIKSSELTFDANASIVTVNTILNYDGLSLPYNTNPDYTSIALGDQSYVVTNDKISI........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 294
25 -36.800IDP02719 gene: inlG; internalin G [Listeria monocytogenes EGD-e] lmo0262 [Listeria monocytogenes EGD-e]  ali follow..  16  1...........................................................MKQRKTSVLHVLLVVTAILGIS---WVNASHGMKAQAESIAQP-APINEIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGINSIEGIQYLTNLNMLGVSSNQIT----------NITPLANLTNLDSLYLGDNKISDVTPLSGLTQLTFVQLSINQIKDVTPLANLTKLNYLDLRENQISDASPLVNMTDLTVLHLEKQQITAAPVVYQTNLVAPDILKNAYGEVVPPTTISNN............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 231
26 -33.500CPX_91662_05666 Complex of CADH1_HUMAN with INLA_LISMO [Undefined organism]  ali follow..  22 1010MNNDITPLANLTNLTGLTL-------------------FNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNQVTDLKPLANLTTLERLDISS-NKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISN----------LAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQA------------------------------------------------------TNAPVNYKANVSIPNTVKNVTGALIAPATISDGGSYTEPDIT------------------------------NLPSYTNEVSYTFSQ-----------------------------------------VTIGKGTTTFSGTVTQPLKAIFNV-------------FHVDGKETTKEVEAGNLLTEP---AKPVKEGHTFVGWFDAQTG-------------------------------------------GTKWNFSTDKMPTNDI-----NLYAQFSINSYTATF---------------DNDGVTTSQTVDYQGLLQEP---TAPTKEGYTFKGWYDAKTGTSKMPAKNIT-LYAQYSANSYTATF-DVDGKSTTQAVDYQGLLKEP---KAPTKAGYTFKGWYDEKT-----DGKKWDFATDKMPANDITL-YAQFTKNPVAPPTT-TTNNGGNTTPPSANIPG---SDTSNTSTGNSASTTSTMNAYYNSKEA----------------------------------------SLPTTGDSDNALYLL--LGLLAVGTAMALTKKARA 1681
27 -30.500IDP95476 internalin [Listeria monocytogenes EGD-e] NP_465993 [Listeria monocytogenes EGD-e]  ali follow..  17  1MRKVLMFLSTALLLAILSLSFTGLDLKAKAASDL--YPLPAPIIDVFPDDGLAKDMAKNLNKDSVNDVIDQDDLDALTGLDSMQLLERFNNVTDVSIMEFGAKTEFPDITTIPHLKTLFFADPPGRLTRNLPNYQNYPEMDTITMSGNNLIGIPDFTGMPALKQLYMSEMLITSDEL--------PNFNNIPLLITLDLSSNQLTTIPDFQNIPNLTFLDLNANLLTNTPDFQNLPKLTDLNLRHNNLTGTVNYTNLPSLESLNLDYNFLTELPS......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 281
28 -30.100IDP05082 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo2179 [Listeria monocytogenes EGD-e]  ali follow..  20  732.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................NGNSEESRITSGNHYILNTSNHLKISKKAKGNRDKEYSGLANATTNSIVSSLENDSDEKIANMVLMDVLPSENDLGITDNSERGSKFNLALTKAVEVPKEWKDKVEVTYSTAKNPKRAGILDKHTIYPIGTEPLVDNTEATQADWLTASEVK-------SNIYSFKIELKEGIEWIPGKSMKIQFDLKTPKKNQIDKTLLKQQTKKEDRAAWNSFAVAVN-VALDDSVAPVTVQYVDQNHKQIASPETLTGAYGEKFTAKQKKINNYSLVKIPANVSGTFNEKAQTITFIYQKVTAGRIIVNYVDKNGEKIADSIVLNGKLNSSYTTSSKKISGYKLYQTPKNATGKFLNTSQTVTYVYERTSNLSIS-----------------------SSNKGTENVKKLAKLPHTGDSTT-TNLWVIIGLFMLSGAFVIMKKR.. 1152
29 -30.100IDP02440 hypothetical protein lmo0331 [Listeria monocytogenes EGD-e] lmo0331 [Listeria monocytogenes EGD-e]  ali follow..  18  31...TANEMKTENQLLKTDLKETPKEKTPTYNDYFPDDNLAKEVAESVTVEELAKVTKLDARSQGIEDSTGIEYLTGLEVLNQLKSID-VSKNLNLKELTCSN-NPLANLD-VSKNLALEELTCENNELTQLD-VSQNTALEYLYCPRNQLTKLD-VSKNSALRYLACDVNQLTNLDVSKNQLTDLD-VSQNPNLGTLVCSDNQLTNLD-VSQNQALENLACDNNELKNID-INQALSLKELSCENNQLTNLD-TTQNLALEILYCDDNQLTDLD-VRKNVNLLILFCNNNQLTNLAVGETIAKV............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 358
30 -29.300IDP05081 putative cell surface protein, internalin proteins [Listeria monocytogenes EGD-e] lmo2027 [Listeria monocytogenes EGD-e]  ali follow..  15  1MKKILTGLSTTLLLTVLLL--TITGGDLKAKAASDLYPLPAPIIDVFPDEGLAKDMAKNLNKDSVNDVIDQDDLDALTGLDSMQLLRAMFNNVNIVSVMEFG-EDLTEFPDISTIPHLNTLFFNTPPEGVTPDYQNYPEMVTITMSGSNLIGIPDFTGMPDLSQLYMADMMITSDDV--------PDFHTIPKLSTLDLSHNQLTNLPDFQNLTNLAELNLSFNNLTNTTNFTNLSNLNNLNLDYNHLNELDQIIKQGETCTIQLP.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 290
31 -28.200IDP95186 gene: lmo2445; lmo2445 [Listeria monocytogenes EGD-e] CAD00523 [Listeria monocytogenes EGD-e]  ali follow..  15  11.................................ADTVPLPAPIIEAFPVEAIAEAIAGELDKDSVNDTITQADLDTMT-------------AIPLPSLGLTG-EDLSVL-NNEVFTNAIELAIWSNNIGELPDSEALPALENIEANGANITVF-PDANYPNLTNVDLSQNNFGFN---------IPKFVGMEGLVSINMENAGLSGYDIWMNMPNLDSLILNENHLISIEDIFLSQQLGTHSFANQTATYPTTIKQGENLKVFVPFIYQALD............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 230
32 -26.700IDP91625 gene: ECs2073; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB35496 [Escherichia coli O157:H7 str. Sakai]  ali follow..  14  7.FNKIKPIQQHPEKNQLNWMLELNKWKEERILTIHRPECRNEAAKRINCAFLSKQNDIDLSGLNLSTQPGLQNFTSINDNNQLTHFD-ATNYDRLVKLSLNS-NTLESINHQGRNVSITHISMNNNCLRNID-IDRLSSITYFSAAHNKLEFVQ-LESCEWLQYLNLSHNQLTDIV-----------TGNKEELLLLDLSHNKLASL-HNALFPNLNTLLINNNLLSEIKFYSNFCKVQTLNAANNQLEKIHFLTYLSSIKSLRLDNNKITRIENTSDIRSLFPIIKKSESLNFLN.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 297
33 -21.200IDP91619 gene: ECs2672; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB36095 [Escherichia coli O157:H7 str. Sakai]  ali follow..  10  9LKTQSVQLNKITSNTESTIKQHELVSDDAIINELSSELVNDKFTPVEDSNLLNMLSEFKLLREQCFRWNYTLLFENYGAYDKTGSIQGEGTLPIRHKLEFISTNKLTKITDARLCLHSNELNLSSLSLGSVPPL--PEWIEMLSLVYNELDSIQ----PESCKELELDFNNLTEFPQVPDGITLINLISYIPKAKKIFICHNKLSEIPAL--PDTAKVFDCSENNIKEIRWF--PKNLKEAYIEYNKIEVIPAI--PGNLKLLCMKCNPIKEAFLMWTLTGIRYEISQRKYIVMN..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 352
34 -20.900IDP91618 gene: ECs2674; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB36097 [Escherichia coli O157:H7 str. Sakai]  ali follow..  10  9LKTQSVQLNKITSNTESTIKQHELVSDDAIINELSSELVNDKFTPVEDCNLLNMLSEFKLLREQCFRWGNTLLFENYESYDKTGS-QGEGTLPIRHKLEFISTNKLTKITDARLCLHSNELDLSYLFLGSVPPL--PDWIEMLSLVYNELDSIQ----PESCKELELDFNNLTEFPQVPDGITLINLISHIPKAKKIFISHNKLSETPAI--PDTAKVFDCGYNKIQEIRYF--PKNLKEARIGYNNIEVVPAI--PGNLKILFMECNPIKEAFLMWTLTGICYEISQRKYI........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 349
35 -20.600IDP05226 putative membrane associated lipoprotein [Listeria monocytogenes EGD-e] lmo0460 [Listeria monocytogenes EGD-e]  ali follow..  11  143...................................EATLTGNFSSYFRNNVFTVLESVRIERSNLSRVTSFALANNYPTAPSLLTTEGMKNCSNLMEVDLSDTSAVTTMWDMNSCRALEELDVSHFDTSSVTNMSYMRNLEVLDVSNLDTSSVTNMYAMTSLEELDVSHFDTSSVTDMYRV------FNGCEKLKKLDVSNFDTSSATAMVQMSALEKLDVSNFNTSLVTDMRAMTSLEALDVSNFDTSSVTNMAAMEKVEKLDLSTFDTSSVTNMGTM..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 417
36 -19.900IDP92552 gene: NOD2; nucleotide-binding oligomerization domain-containing protein 2 [Homo sapiens] NP_071445 [Homo sapiens]  ali follow..  16  736MPGFIWLIRSLYEMQEERLARKAARGLNVGHLKLTFCSVGPTECAALALQHLRRPVALQLDYNSVGD-IGVEQL--------------LPCLGVCKALYLRD-NNISDIECALHCEQLQKLALFNNKLTD-KLLACRQNFLALRLGNNYITAAEGLRGNTSLQFLGFWGNRVGDEGAQALA----EALGDHQSLRWLSLVGNNIGSALMLAKNVMLEELCLEENHLQDAEGLKKNSSLKILKLSNNCITYLQALERNDTILEVWLRGNTFSL............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 1025
37 -19.600IDP91701 gene: SLIT3; slit homolog 3 protein precursor [Homo sapiens] NP_003053 [Homo sapiens]  ali follow..  13  49.GLGLRAV---RNAERLDLDRNNITRITKMD-----------------FAGLKNLRVLHLEDNQVSVIERFQDLKQLERLNKLQVLLLFQSTPKLTRLDLSE-NQIQGIPAFRGITDVKNLQLDNNHISCIEAFRALRDLEILTLNNNNISRILSFNHMPKIRTLRLHSNHLY--NIVDCRGKGLMEIP--EGIVEIRLEQNSIKAIGAFTQYKKLKRIDISKNQISDIAPFQGLKSLTSLVLYGNKITEIAKFDGLVSLQLLLLNANKINCLRVFQDLQNLNLLSLYDNKLQTIS.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 419
38 -15.100IDP91566 gene: ECs1568; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB34991 [Escherichia coli O157:H7 str. Sakai]  ali follow..  12  1................................MLPTSQLRPTGTFCSYSAETSADIKSEITPIQIEEARASGRLY--------CDIEYLPQLNEITSVTIENCNNLTTLTGL--PVNTQNLSVINCEKLQITDMPS--TVKNLHIELTDSPFIHFIS--EGIECLTVCHCYISGVP---------------ESVRYLEIKGSATDSIKNV---NGLSSLSINSYNPENQARIDNSPSLKTLSLTGSNIILPEKL--PESVTSVTIHAE................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 210
39 -12.800IDP05697 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo2178 [Listeria monocytogenes EGD-e]  ali follow..  18 1018...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AKFQLYTLEGDKAGQEATTDSD-GKYKLVETEAPTGYTISDEYKDGKEITVTADIATSVTIENTEQAGAEFELQNADGTKVADNLVSNADPGDYQFVETKAPTGYVLDGAPTKFTVEFNQEAAVIVTKENTAKTGSVVLTKEDSVSKATLSGDNLTTNADGKLEVTDLAPGDYKFVETKAPTGYELDATPVTFTIEFNQATAVNVTFELQTKLGVSLKDKVVTEANPGDYQLVETKAPTGYDLDATPVEFTIEFNQKAPIQVTKTNTMSTGSVVLKLVDEDNNVTENLTT-SGKLGDYQLIETKAPAGYELDTVPVDVKITFDQKETLQVTKTNLKTSGKVIAEFVDTKGNVLAEKEIHTGIVGDKYATKAKDIKGYKLTKQPTNKEGVFKETEQKVTFVYEKNKAPIVV-----------NPDKPVTPVKPTKPVDPAKKPTVKTSLPSTGDESPYGIIF--TGLFASFMGLFLLRKSKK 1596
40 -12.300CPX_91689_91672 Complex of C4BPA_HUMAN with ARP4_STRPY [Undefined organism]  ali follow..  6  625................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AVLGAGFANQTEVKAAEIKKPQADSAWNWPKEYNALLKENEELKVEREKYLSY---------------ADDKEKDPQYRALMGENQDLRKREGQYQDKIEELEKERKEKQERQEQ-------LERQYQIEADKHYQEQQKKHQQEQQQLEAEKQKLAKDKQISDASRQGLSRDLEASRAAKKELEAEHQKLK----------EEKQISDASRQGLSRDLEASREAKKKVEADLAALTAEHQKLKEDKQISDASRQGLSRDLE----------REAKKKVEADLAEANSKLQALEKLNKELEEGKKLSEKEKAELQARLEAEAKALKEQAKQAEE--------------AKLKGNQTPNAKVAPQANRSRSAMTQQKRTLPSTGETANPFFTAAAATV-MVSAGMLALKRKEE 983
41 -11.000IDP06520 gene: ebpCfm; pilus subunit protein EbpCfm (Fms9) [Enterococcus faecium DO] AFK59016 [Enterococcus faecium DO]  ali follow..  11  256............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................NNDFAEASIEKGQLIVNHLEVGKYNLEEVKAPDNAEMIEKQTITPFEILANSQTPVEKTIKNDTSKVDKTTPQLNGKDVAIGEKIQYEIS----VNIPLGIADKEGTQNKYTTFKLIDTHDAALTFDNDSSGTYAYALYDGNKEIDPVNYSVTEQT-DGFTVSVDPNYIPSLTPGGTLKFVYYMHLNEKNQANVDNGHTNDQTPPSVDVVTGGKRDGDVTSDQTLAGFVVRDQDSDTAKYLSIDPSTKAVSWVSAKESATVFT-TTSNGL------DVTGLKYGTYYLEETKAEKYVPL-----------TNRVAFTI------------------------DEQSYVTAGQLISPEKIPNKHKGTLPSTGGKGIYVYIGAGVVLLLIAGLYFARRKHSQ 624
42 -11.000IDP05655 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo0159 [Listeria monocytogenes EGD-e]  ali follow..  20  256...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................NFSATSDGFSVALGNLTDSVQISYTTTTTDGGKSTQYDNTAKLAGTDFVTKQTSTWTPASGGGGEGGGTTGSVTLTKEDAKTKATLEGAEFKLVDSKGTVLQENITTNASFDTYQLIETKAPTGYKLDTTPVEFTIGENNQAITVTKENTLNTGAGATFELQDKEGNTLQTDLKTDENPGSYQFVETSAPTGYKLDNSPVSFEVIAGETDQVVKVTKENTLEAGATFELQDKEGNTLQTDLKTDENPGSYQFVETSAPTGYKLDNSPVSFEVVAGETDQVVKVTKENTLEAGATFELQDKEGNTLQTGLTTDEN---TYQFVETKAIGYELDTTPVSFEIVAGETDPIVKVTKENTLVPPTPVPPTPVPPTPVPPPVTPKKTENSEDSPKTTPIRITQSLPKTGDTNSFAGLG--VILIALSLSGLLLKRK.. 793
43 -10.900IDP91710 gene: NXF1; nuclear RNA export factor 1 isoform 1 [Homo sapiens] NP_006353 [Homo sapiens]  ali follow..  11  164..EDASTASALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRI--------------ENIPELLSLNLSNNRLYRLDDMSSIPNLKILNLSGNELKSERELDKIKKLEELWLDGNSLCDTFRDQSTYISRERFPKLLRLDGHELPPPIAFDVEAPTTLPPCKGSYFGTENLKSL--VLHFLQQYYAIYDSGDRQGLLDAYHDGACCSLSIPFI................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 423
44 -9.960IDP91911 G5 domain family protein, partial [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100005012 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  13  437..........................................................................................................................................................................................................................................................................................................................................................................................................................................................KDGKTANITTTENPDGSHTITVTNPDGSTKETVVKNGKDGKTPKVEVTDNNDGTHTVKVTDGDGNVTNKDGKAATATTTENPDGSHTVTITNPDGTKNEFVVKNGRDGVDGRTPTASVRDN-VITNPEGVTTETTVRDGKSPKVTITDEQNGTHKISVLNGDGTTTETIIKDGKSPVATVRDNQDGTYTIRVENGNGTVSETTVRDGKSPTAKVVDNGDGTHTITVVNSDGTTTTTTVRYGREPKLEVIDNNDGSHTIKVTGADGKETTTTIFDGKSPKANIVDNGDGTHTLTIVDSDGREYKSIIK-DGKDGVSPTVTVENNNDGTHVVTITNPDGSKTKDGKSPKVSVEDNGDGSHTITIINSDGT-VTKTVIKDGKDGRDGRDGRDGKDG---PSNDKPVPPAPNVPTPEVL---QPTPAVPTPEVPVPEQPVVPTPAQPATPVNANPVAPTTGKENRGDKLPETGSQSDYISVLLGSGILLSLYV----RRKED 974
45 -9.860IDP01796 cell wall surface anchor family protein [Bacillus anthracis str. `Ames Ancestor`] GBAA5258 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  9  175......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................NGDYLETGFYAVQTNAVSGSYTILPENAPKGLRIVNENGEEKSTLSINEKFKILLPKDTSSGNF---KMKVKSTLTNLQAIAFKTTVLLQRNSEKISTDLVVNWESVGSLKIMKLGEKKEVLKGAV-------------------------------------------FEVSNENFKQNVTTSDKGIAELGN-----PIGIYSVKEIQAPAGYVLDRSVKKIE--VKTGETAVLELKNENVKGELEITKVDEQGKEVVKGKT-KGVAGKYTYKETIAPNGYVINEETFA---EIKENGEIIKHIVDKKVEGELEITKVDEQGKEVVKGKT-QGIAGKYTYKETIAPNGYVINEEKFGFEIKENGEIIKHIVKNKKEEKASFPSKPNKPTPNGEVKPSAD-------KPMQQPSTHNEVRLPATGGVSNQFTSLFVLGISFIIAGAYVLRMKNR 624
46 -9.630CPX_91710_91752 Complex of NXF1_HUMAN with TIP_SHV2C [Undefined organism]  ali follow..  14  205...................................KPEQVEQLKLIMSKRYDGSQQALDLKGLRSPDLVAQNIDVVLNRRSCMAATLRIENIPELLSLNLSN-NRLYRLDDMSSIPNLKILNLSGNELKSERELDKIKKLEELWLDGNSLCDRERFPKLLRLDGHELPPPIAFDVEAPTTLPPCKGSYFGTENLKSL-YDSGDRQGLLDAYHDGACCSLSIPSRNVKKLKDPT--LRFRLLKHTRLNV--VAFLNELPKTQ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 473
47 -9.010IDP05538 putative collagen-binding surface protein [Clostridium difficile 630] CD3392 [Peptoclostridium difficile 630]  ali follow..  13  690.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TLTDEYEKEISIHTTATSKDGEKTILAGKEVTIVDTVKLDGLTKGTKYQLKGWQMLKEENAELIIDGKRVENDYTFIADEEEMKVEISYTFNASALGGKNLVTFEELYDLSNPDEPVKVA-EHKDIEDDGQTVLITERIIKIHTTATDKDGNKELEAGKDVTIIDTVTLEGLEVGTQYKLVGW------QMLKEENAELLV-----NGKRVESDYTFNMKVEVAFTFDATSLDGKQLVTFEELYDLSNTDEPKKVTEHKDIEDEGQTIT------------KEKPEVPEKPEQPQTPEKPSRPSDSPKTGDSTNLMAFIVMLLVSGGGLAGTYLYKRRK 1010
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.