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Query: IDP05755 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo0732 [Listeria monocytogenes EGD-e], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKKAFLCLSAIVLSLNFVWINPITGSASKIETTKETNQQVNLKNNVTDIVTSEDLGGQTWLINEVNRQLAPKTVDVNLTFEDLAKITTISLNNRSLTGEVPPEIKNLVSLQRLYLFSNKLSGEIPAELGELTKLTELRLDYNELSGKIPDGLGNISEIALQNNRLVGQIPLSLYENRTGKNEVNVSGNQVTINSQQSEPSVYSAYTFVYPSSTPEYSGHIKANNSFISNLTNDMNLTPFLKNSPTFINLQVVYMFNSELFDGHDVTITDTNDGRVLYDGTLTSDISIPLTNFKSGVHVINVMLDNAPNNPQNQTTFLIDILPVPAHDLTVNYVDEAGAEIHEPQTVSGNVGDDYDVTTPEFELAIDKYELDTEQMPTNGLGTLSSEAQTVTYVYKKVNGAPVTVKYEDQNGVEITTSDVLTGKLDATYQSKAKEIAGFTLDNSKLPANASGIFETNPQTVTYVYQAVPATIKAHDSTIYVEDKWSAEDNFDSAVNSVGAAVSFDDLEVEGTVDTTKAGVYPVTYSFAGESVTINVTVKAKDLPAPPVTPTKPVVPIQPTNPDQPDIQAAPGEHQASTDKSEALKVTVAQKEQPTVAGNLKLPTTGDNLWDSVLYSVFGLIAVCVAFSLFFWRKKQKHSLast
1 -141.000IDP05755 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo0732 [Listeria monocytogenes EGD-e]  ali  100  1MKKAFLCLSAIVLSLNFVWINPITGSASKIETTKETNQQVNLKNNVTDIVTSEDLGGQTWLINEVNRQLAPKTVDVNLTFEDLAKITTISLNNRSLTGEVPPEIKNLVSLQRLYLFSNKLSGEIPAELGELTKLTELRLDYNELSGKIPDGLGNISEIALQNNRLVGQIPLSLYENRTGKNEVNVSGNQVTINSQQSEPSVYSAYTFVYPSSTPEYSGHIKANNSFISNLTNDMNLTPFLKNSPTFINLQVVYMFNSELFDGHDVTITDTNDGRVLYDGTLTSDISIPLTNFKSGVHVINVMLDNAPNNPQNQTTFLIDILPVPAHDLTVNYVDEAGAEIHEPQTVSGNVGDDYDVTTPEFELAIDKYELDTEQMPTNGLGTLSSEAQTVTYVYKKVNGAPVTVKYEDQNGVEITTSDVLTGKLDATYQSKAKEIAGFTLDNSKLPANASGIFETNPQTVTYVYQAVPATIKAHDSTIYVEDKWSAEDNFDSAVNSVGAAVSFDDLEVEGTVDTTKAGVYPVTYSFAGESVTINVTVKAKDLPAPPVTPTKPVVPIQPTNPDQPDIQAAPGEHQASTDKSEALKVTVAQKEQPTVAGNLKLPTTGDNLWDSVLYSVFGLIAVCVAFSLFFWRKKQKHS 638
2 -81.000IDP05561 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo2026 [Listeria monocytogenes EGD-e]  ali follow..  35  2.........KKKFVYLLLLVLFMT-VLPFQMLEAQAASTSWIEQE---------LDGNEPFIAETEKILS--KNRQDITLADLETIQKIHVFGAD---SIPNKISDYKNLTALEANYGTIT-EVPESVGSLKELVTLNVDENNLQ-EFPMVIFKLEVLYISRGNIT-EIPTEITTLASHLKVLDVSNQKLV-TIPDSILTTNWKAMHDGKLGGNMLEFYDNPTIDYLQKQDQLTYTGGTIEVPLNTDFKQLTPDKTNLGLKSNIPLFSQHEFMYYDDGTSANILTNGVATDVGDGYITIKSTLSTNSNPFAKVRVPIKVTAPLKGADVTVQYLDSNGDTLATPDILSGNEGDAYASTPKT----IDGYTL--TQTPTNAQGTFTEEPQTVIYVYTKVAAAPVTVKYLNEEGKILTASDNLTGNVDDPYQTKAKEFAGYTLDESKLPTNASGVFKTNAQTVTYVYKTIPASIKAHDSTMNVGDTWSAKDNFDSAVDSLGVAVPFDEVKVDGSVDTTKAGVYPVTYSFAGDSVTIKVTVKATVVPAPPITPIKPVVPAPANP-------NTPSTQQTPTKQSGTLKIKATHQEQPIVAGNLKLPTTGDNLWDSVLYSIFGFITVCLSFVLFFRLKKQKNS 626
3 -49.300IDP01916 hypothetical protein lmo0327 [Listeria monocytogenes EGD-e] lmo0327 [Listeria monocytogenes EGD-e]  ali follow..  16  1......................MLKKIFIALIALVVIINTVSFTSVSASTLEQTMNNNEPFIKEIETETGKTRANITQT--DLEAITALRV--TGAS-DIPANIDMLTHLTLLKAVQGTIS-SVPNSVGNLKELKILNLNTNHLS-NFPTIVYKLEELQLNDGTIE-EIPATITNMASHLKFLTVNNNRLV-KVPTIIFSTNWSNSSTGELDLFTTGNQIVTDIPANYVSNFNNGQNMLEFYDGQFQKQDQLTTTPGYTIDVPVGTDFNQLTPDKTKLALTSGRIHNGVAAAPGQATIFIKSKFSTQSNKFARTQVTVNIAALNGGPITVKHEDTKGQELAPPVILNGKDGDPYTTTQKT----FPGYTL--VATPANQNGAFTLNPATVNYVYSANDYK-LTSTFKDAQGQELKAPVVDTYHIQDNYTTTAATIPGYSLVST--PANQNGTFGAGNVTVNYVYKKDDYTL----TSTYKDTNGQELKAPVVTTYHYQDTYTTTAAVFPGYTLVATPTNATGTFGSSNITVHYVYQANGYQLPDDVDTKTYHVNDPYTTTAKTIPGYTLVTTPTNNQGNFGTSDITVDYVYKAEDYT-TYKDAQGKELKQPVVDS....................... 614
4 -49.100IDP05699 hypothetical protein lmo2396 [Listeria monocytogenes EGD-e] lmo2396 [Listeria monocytogenes EGD-e]  ali follow..  20  83IKDLTGLDKAVNMTKLYFSNQSQIKNLDK-IKNLPNLKKIVAVTTGLNNI--SALGEMPAL-EEVELGGDYIT----TPLLEKENLTSFSYNSYAWSN---KNFTKLKSLVKLDLTWNNITD---SPLTENDHITNLNLNYNQFTNVAPATMKNLKVLYLNNNNLTS---IDALNTLRGLTIAYADNNNITDLSNLK-TSAKSLSGWTVKTTPNNATGVFTNSKQTVTYVYEKADGAPVTTGVFTNSKQTVTYVYEKADGAPVTVKYVDADGNELATSDTLNGKIDAPYQTTAKSLTVKTTPNNATGVFTNSKQTVTYVYEKADGAPVTVKYVDADGNELATSDTLNGKIDAPYQTTAES----LSGWTV--KTTPNNATGVFTNSKQTVTYVYEKADGAPVTVKYVDGDGNELATSDTLNGKIDAPYQTTAKSLSGWTV--KTTPNNATGVFTNSKQTVTYVYEKADG---APVTVKYVDADGNELATPDTLNGKLDTSYAVTAKNLSGWKLTATPSNANGVFTTDAQTVTFVYAKQ-------------------EDDPKKDDKTPNNTKPDTNKTPIKINENKPTASKVTTIKRQTKLPKTGDTQQDSILFGLVGTCFVLLGIYSI----SKKNS 940
5 -44.200IDP05555 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo1413 [Listeria monocytogenes EGD-e]  ali follow..  19  67...................................................................................................................................................................................................................................................................AAYVLFNNKQYNITDYTVENDVNFRLKLPKTDTLNYFTITGNVLDPVAYPGQESYKLAGPFSPIEKANIQVNYVDETNQTLATSDTLSGKLGETYTTSPKA----IDGYQVKET--PTNATGTYTTNTETIQINYAVEGANVSVEYINEATNESIAPTETLSGKIGTTFQAEVKEIDGYEL--SQVPSNQSGTYTDQTQSVIFKYKKTPDEVAKDVTVTYKDTKGNQLADPVILKGDIGSTFETEAKSFKGYKLTKTPSNHSSVFTSDSQEVEYVYSKDDAVITPPVTPVNPDKPIINPVKPVN------PATSTVPNKNISKKNTTKTVNQTGKTSTALQLPKTGDS--ENNLPLIIGVSLLISGVYIFTTRRKRVK. 439
6 -37.300IDP02661 hypothetical protein lmo1289 [Listeria monocytogenes EGD-e] lmo1289 [Listeria monocytogenes EGD-e]  ali follow..  12  20..VPLSQTSLPSFAAEEIALKESQDVVNIPDPQLKKELNLYLNQAENADITEAQMATFRNIITTLSINNINASYE---PIQTLSSLEKLVINGENVNADIIPDLSVLSNLTFLDLSRTNIDDTIFSKISNIPNLNKLDISNNKGITKISNNLPSLQELRVSDCQITNFKGIE---KFPNLTAFYGDGQLFG-IDSFETDGFKNIKSSELTFDANAKTLFVPFSIVTVNTIL----------------NYDGLSLPYNTNPDYTSIALGDQSYVVTNDKISINQQ---------------ITLSDFTQADFDELEAFEVYLGFDSGNISKPANLANGTYSLKQIGSYR---------------------------AFSVDHSVNITAQDNISYIQNDTVTPEKFLTDIKADANGGTITSDLTDKVDFTKPGNY---------TVTLNAQNTKGLKGEPIQVTVTIIEKTVITADPEVTYDLNEAITEEEFLAEIKATTNDDTMITS-DFESAVDFTKAGEYIVTLNAENDAAPLTVKIRVNPKLPDPVVPIPYPDPTPDPTPDPTV-PVPTPEDSTSDDGGVQHSNSRNPRISISDSSLEKLPKTGDSLPESGV--LLGFLTLALG--IVIRKK..... 593
7 -35.900IDP05656 hypothetical protein lmo0171 [Listeria monocytogenes EGD-e] lmo0171 [Listeria monocytogenes EGD-e]  ali follow..  13  142ITSLTGIEHLTALENINVNNNELTT---DSLFNIPTLKSISANNNKITGNF-SLVKTLPEL-HTLEVLGNAIT---ELDIENQPNLVTLSADELELKK----TLKNLSQLNGLGRIASSIS-----TLMNLPEIISVDISGNYLDSDD-ENLPAVKNLDISSNELTRLPKIN---DFPLLTTINVRSNKIDRLESSKLVDVPKLAT--LNADKQAVTLSKTIAAGNFTIPNNVENLAGQMVTPKIISNNGTYSVSYAPVNAKDEATFLQDIRASASENAQITSDYSEVVDFATPGDYTVTLHAKNEFDLKADPVTVVVHINDIQKPQVAVNSNDISGTELTSEVLLAKSGAVVTDLYDEAIKMEVDLSEVDSSKLGTYEATIIAKSKSKLSVKIVDTEKPIIQIEIIIEKGSELTEGQIID-QVGITATDNYDQDLNIHMDLSKVDTSKPGSYEGNRSETVTITVKVPEARIGKITIQYMDSENNELAESNTITGEVGETYETLAKEIEGYTLKENPANSSGVFEETRQTIQYIYVKDIIN-PEFPVYSENNVTPELPSNNNNSVNGSRQTPSKSVK--------KQSKAYSKINQMPMNLPETGDST--NLLFIFMGVLLLAGL--TLSKAKRKNQ. 832
8 -35.300IDP05657 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo0175 [Listeria monocytogenes EGD-e]  ali follow..  12  130....................................................................................................................................................................................................................................................................................................................................KFDWKTSYSGEGGEAKIDSLVATATATSEDKAGNKSTSTG-------SLKPKDISAPVVKAEETEITYSPGS---DVTEEQFLTDIHASVTDNYDSTISLTSNFTSAVNLAVSGDYSVNVQATDKAGNVSNTLNVTVHVSTPAPVA-GANITVNHLDSNGNKIAESDTLTGVVNSNYQSESKKITGYTLETTPTNATGTFTDTPQTVDYIYKKDTVTPTPITVNPVEPVKPVNPVVNKP------------VTVKPANDNTNPSTSNSVEKTTYSSLPTTGDTDQSKSS--TIFGALLLLISAPLLLFKKK... 415
9 -33.800IDP01745 hypothetical protein lmo2821 [Listeria monocytogenes EGD-e] lmo2821 [Listeria monocytogenes EGD-e]  ali follow..  16  105ITDMTGIEKLTGLTKLICTSNNITT----DLSQNTNLTYLACDSNKLTNLDVTPLTKLTYLLTYLNCARNTLT---EIDVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE----DVSQNKLLNRLNCDTNNITKLDLNQNIQLTFLDCSSNKLTE------VTPLTQLTYFDCSVNPLTELDVSTLSKLTT-----LHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGITEDVTVHYLDDKGEKLADDEVLSGNLDDPYTSSAKDIPDYTLTTTGTFTTTSQSVTYVYTKNIVAAEPVTVNYVDDTGKTLSPSEILNGNVGDTYNATAKQID------GYTLSAEPTNATGQFTSSAQTVNYIYTKNEKGVVEIHYVDEDNKQLNSTTEISGTIGDNYTTEPKTIEGYTLTT--TPGNATGTFTTGSQTVTYVYTKNIEA-AEPITVNYVDANGKTLAPSETLNGNVGDTYKATAKQIDGYTLSAEPTNATGQFTSSAQTVNYIYTKNTNTDQPLPTKKPTNTTPTKPSNLKT----------------------------TEVKKASDTLPKTGDSA--PWKSALLGVFLSSTALVIWKKKK..... 851
10 -33.400IDP01994 hypothetical protein lmo1290 [Listeria monocytogenes EGD-e] lmo1290 [Listeria monocytogenes EGD-e]  ali follow..  13  66....ITEAQMDSLTYITLANINVTD---TGIEYAHNIKDLTINNIHATNYNQ--ISGLSNL-ERLRIMGADVTSDKIPNLSGLTNLTLLDLSHSAHDDSILTKINTLPKVTSIDLSYNGAITDI-MPLKTMPELKSLNIQFDGVHDYRGEDFPKLNTLLAYSQTIGGKKLIN---SDIKSSKLTYNAENQTLYVP----------------------------FSLMTERTVNYDGYVPDFVKSTASSDTYFTMNEQQVNG-----------------------------------------------------------NRLTITSDGLTVSDVSKTDFDN---------EKMEYNARIDLSYQSYNTPEQFQNGGSYTISMPIYDHYFTVDHSLNITADSEKTYIENQ-SDIHAKTDDGSTVTSDFADKVDFNTPGTYTVTLQSENNAGLKATPVQVNVTIKA--KTTITADEKITYKVDTSKTEAAFLADIKATTNDGTAITSDFATVVDLSKPGKYVVTLNAENDPVQVMVIVEKETPIPDPTPTPTPDPTPTPDPSPTPNPVINPNVNKPEVPSYKIPSLTVNEKKAKAEPSKEALPKTGDS--LPVAGATVGFLLI--GLSWFVSRKK.... 598
11 -32.900IDP01918 hypothetical protein lmo0514 [Listeria monocytogenes EGD-e] lmo0514 [Listeria monocytogenes EGD-e]  ali follow..  13  9LATICMFIMIYPSTAAHAEETNIV-NIPDA--NLKTYLNGLLKQASDAPITKTQMNTIQTV-TLSGSTYTDLTG-----LEEAGNLVTLSLNNTNIQTLEP--IKNQTSLTYLTVGGDNVKDSLFVDLNGLVNLQSLSINGSEVTHN--NKLPKLTYLYAQNSMKITDI--SALASLPALTTLFLQFDGIDD-----------------------------------------------FRPLNDFESFKNGNLKALAAFGQNTGRTNPRITLKSGKLDYNETNQTLYLPFSMMPKPLTSFDGTVAPFSKSTSASNTYLGFNDVALPSSRLSITDDGITVSGVTKEEFDNLDEIEYNARYDFPTGSYPTPPSMTSYTISSGTYDQYFDISHTLDLTADESFDYNQYDTTSEEQFLKDVHAETDDGTAVKSDFDQVVKLDVPGTLNAENAAGLKATPVTVKVTVHEK--PVITSDSQISYKKETTKSVDEFLKEIHGSVTGNAVLTSDFDKVVDLNTPGEYTVTLNAINDADPVTVVVTVTTSDSGHVDPVPPTTTEDSVKEDQAKDGQAKSEEKADKTSLTTKENKVEKSEKTNQPKTKALPQTGDT--NKTALPIAGVMLSLAALLIF----RKSKS 605
12 -32.900IDP95476 internalin [Listeria monocytogenes EGD-e] NP_465993 [Listeria monocytogenes EGD-e]  ali follow..  12  95...RAMFNNVTDVSIMEFGAKLTEFPDITTIPHLKTLFFADPPGRLTRNLSLPNYQNYPEM-DTITMSGNNLIGSIP-DFTGMPALKQLYMSEMLITSDELPNFNNIPLLITLDLSSNQLTT-IP-DFQNIPNLTFLDLNANLLTNTPDQNLPKLTDLNLRHNNLTGTMVN--YTNLPSLESLNLDYNFLT-ELPSNVLDTIYV---------QSQNGELPDQTINQGDTCTIDLPIYFQMEETNMLSVIQLPTTVNEEGNTITVDTSALSPGEYVSYNHNYATGGVCSYDWNVTIN..................................................................................................................................................................................................................................................................................................................................................... 388
13 -32.300IDP05426 hypothetical protein lmo0610 [Listeria monocytogenes EGD-e] lmo0610 [Listeria monocytogenes EGD-e]  ali follow..  16  23......SANVSAEENISIKAAQDVVNIPDP--ALKSYLNGLLGQPSTSDITEAQMDTITDV-TISNASLTDLTG-----LDYAHNLTILHLTNTGVTD---SLVANIPSLTNLNISGSNLTTNSIPDLNGLTNVTNLNLSSGKLDNS--NKLPNLTFLNLDNNPSITDF--MPLKSLPNLASLFIQFCGVND---RGIDSFPKLTN--LAAFGQNVGS---ILINSTIKSSALNYNEANQTIFVPFTLMTERSMNFDGYLFPFTTNTASSSTYFTLNGVQISGS-------------------------------------RLSIDDTGVTVSGITKDFFDSITKMEYNAFYDNPAGSYNSPPNFNSYSVSSGTYDHYFDIDHSLTITNDSAISYGEQTTVTEEQFLKDVHAETDDGTPVTSDFNTIVDFSKPGVYTVTLNAE----NAAGLKATPTQVTVTILAK--PVITADKSISYTKDTTKTEQQFLQDIAAKTSDGSKVTSDFDSVVDLAKVGTYKVTLNAVSADVIILVNVVAGNEPPTPPGPGPDPTPDPTPNPNNPNINPNPDNGQSAK--------SEIASNPSNSEVNIALPNTGDA--SQATTVLIGIILAGVAILFFRKRKHS... 589
14 -32.300IDP05666 gene: inlA; internalin A [Listeria monocytogenes EGD-e] lmo0433 [Listeria monocytogenes EGD-e]  ali follow..  13  132IADITPLANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISASGLTSLQQLLERLDISSNKVSDISV--LAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNLAPSGLTKLTELKLGANQISNISP---LAGLTALTNLELNENQLEDISP--ISNLKNLTY--LTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDVSSLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATDITWNLPSYTNEVSYTFSQPVTIGKGTTTFSGTVTQPLKAIFNVKFHTEPAKPVKEGHTFVGWFDAQTGGTKWNFSTDKMP-NLYAQFSINSYTATFDNDGVTTSQTVDYQGLLQ---EPTAPTKEGYTFKGWYDAKTGGDKWDFATSKMPAKNITLYAQYSANSYTATFDVDGKSTTQAVDYQGLLKEPKAPTKATFKGWYDEKTDGKK-ATDKMPANDITLYAQFTKNPVAPPTTGGNTPPTTNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTMNAYDPYNSKEASLPTTGDS--DNALYLLLGLLAVGTAM-ALTKKARASK. 800
15 -32.100IDP05668 hypothetical protein lmo0576 [Listeria monocytogenes EGD-e] lmo0576 [Listeria monocytogenes EGD-e]  ali follow..  23  195..........................................................................................................................................................................................................................................................................................................................SKNNTPPVVEKGTVTVNYQDEQGNSLATSETLKGDIGQPYQTATKN----IEGYQL--KEVNGNTTGTFTEKAQVVTYVYQKVPVATVTVKYLDQDGNKIHDPQTISGNIGEPYDASTDQIDGYTLDTTKLPNNANGIFTNQAIEVTYIYTKEAQD--VKITIKFVDSNGDPFVLTDLTTYKNGDLVPIYP-NLDQYHMRLNYNQQIYNQGEAVPDIVIPAKEGETYLLPERMTFNILDDQGKQIPYVISQNADFSSTPTNREGTLTSEDVVVTYQILVYGVLIPE-P.................................... 487
16 -31.300IDP95186 gene: lmo2445; lmo2445 [Listeria monocytogenes EGD-e] CAD00523 [Listeria monocytogenes EGD-e]  ali follow..  16  28.....AIAEAIAGELDKDSVNDTITQADLDTMTAIPLPSLGLTGEDLSVLNNEVFTNAIEL----AIWSNNIG-ELPDLSEALPALENIEANGANIT-VFP--DANYPNLTNVDLSQNNFGF-NIPKFVGMEGLVSINMENAGLSGYIAEDMPNLDSLILNENHLI-SIPEDI-FLSQQLGTHSFANQTAT-YPPTTIKQGENLKVFVPFIYQ......................................................................................................................................................................................................................................................................................................................................................................................................................................... 227
17 -29.500IDP05081 putative cell surface protein, internalin proteins [Listeria monocytogenes EGD-e] lmo2027 [Listeria monocytogenes EGD-e]  ali follow..  15  63VNDVIDQDDLDALTGLGFETETITNDLERAMFNNVNIVSVMEFGEDLTEF--PDISTIPHLLFFNTPPEGVTRNLSLPDYQNYPEMVTITMSGSNLIGAIP-DFTGMPDLSQLYMADMMITSDDVPDFHTIPKLSTLDLSHNQLTN-LPDNLTNLAELNLSFNNLTN-TMTNF-TNLSNLNNLNLDYNHLN-ELPSNVLNSIFI---------ENQSGTVPDQIIKQGETCTI..................................................................................................................................................................................................................................................................................................................................................................................................................... 287
18 -29.000IDP05663 hypothetical protein lmo0333 [Listeria monocytogenes EGD-e] lmo0333 [Listeria monocytogenes EGD-e]  ali follow..  16  600ITNIGTMDNLPDLTYVNLSFNRIPS---APIGDLPNLETLIVSDNNSYLRSLGTMDGVPKL-RILDLQNNYLNYGNLSSLSDLTNLTELNLRNNVYI-DDISGLSTLSRLIYLNLDSNKIED---SALSNLTNLQELTLENNKIEN---SDLENLNKLVVSKNKIIDISP---VANMVNRGAIVTASNQTYAPVTSDFATVVDLNTFGEYEVT-TVTLNAVNEDGISAEPVAVTVTINKEPAAALKADAEVSYAKNEAVTESDFFKDVHLEGTEAPSTAKATSNFDSVVDRSKTGDYTVTINATNEDGAVSTPIEVIVHISDAAAEKVNVKYVDENGSEISAAETLTGNLDETFSIDAK---------SIAGYKCDATLSGVFSTVEQTVVFHYKAIKPGVVTIKYEDTNGKAVDEDKQITGEVGDDFEAEAQTVSGYSCRA-----IASGKITEEPQTITFTYSTATPSKKSGEITVYVDESGKKLADSKKVTGNIDDSYSVEAKAIEGYSVVGDD-SAKGVFTEKSQTVTFKYKKNT--------------------------------QVSKDDPKVKGKTNQPSSTDTKLKVDNNSLPATGDTE-NMILAVLIGFNMLIVASIFLFRKPKTNQ. 1778
19 -26.500IDP00005 internalin, putative BA_0552 [Bacillus anthracis str. Ames]  ali follow..  13  562ITDFSGLEFMTNVEELTLQNVNMKN---EFISSLRNLKSVDLSYNQIEDIKP--LHSLEDL-EKLNVSDNGIK----PELFKMQKLKTLDLSNNKLDNAALDGIHQLENLDALLVNNNEINN---DEISKVSKLNKLEMMSNKVRDISPASLKNLQWLNLSDNKIQD---ISTLSSMLDLLSLKLAGNEIRD---RPVIQLAQWIT--VDIKNQKIV--------------------LEDGQMNQEIQIPIYDLEGEIFEDIELKSTDGIVTDRVVWKTPGAKIYSFSLNGNYHGLSLLFSGTVTQ--------------NIVAKEEPKEPVEEVEGSKEEPIKEAEGSKEEEPAKEVEGSKEEPK----EPAKEVEGSKEEVKEPAKEVEGPKEEVKEPTKEVEGPKEEVKEPTKEV-------EGPKEEVKEPMKEVEGSKEEVKGPTKEAEGSKEEVKEPTTEVEGSKEVKEPGKEVEGSKDAINQSAVAQETNVNNQVGKEKVVE-----------------------------------------------------------------------NQNMKENKPAVTKQEESKKSLGATGGQENTSTLLS--GLALVLSALSMFVFRKRLFKK 1070
20 -25.700IDP05076 hypothetical protein lmo0801 [Listeria monocytogenes EGD-e] lmo0801 [Listeria monocytogenes EGD-e]  ali follow..  15  93IKSIEGVEYLQNITELDVEKNQITDIAP--VANLKKLTTLLINTNQITDISP--VADLANL-TTFYCGNNPIS----SAVQNLTKLSIFNCYTANVED---SPVKNLVNLKTLSLGSNNIHD---SDIEKLTALEYLSFSNNPVENPEVGNLTNLNTLWLYNAQIRNIDFTA---NLPKLKSVYLYNNQISN-----------------------------------------------ISEVSNWANIEYLELNNNQITDITPVANLTTLKTLKLNDQIITNREIPFQKNISIENKVMDNFGNIVT-------------PNNISDNGTYNSPTLSWNLNETKDNLSYDFTTKITILNINATYSGT-----IQPLTKDSTRPIITADGKVSYPEGTTKTTTEFLTDIHATTDDGSPIEVDLNALDGTAGSYTVTLTAVDTAGNEATPVDVTIIITSVDTSKPVITADEKVSYPEGTTKTAAEFLTDIHATTDDGSPIEVDLNAVDFGTAGSYTVTLNAVDTAGNEATPIQVTIIITNSKKIDPIIPVEPNDVKPEKPNEIIILPKDSEIPLSIIPKDNIEKTNSINVIKMIETNEIKNKMLPKTGDKLPLTVFLG-----MLITLAGISYLRK..... 646
21 -24.900IDP02569 gene: inlE; internalin E [Listeria monocytogenes EGD-e] lmo0264 [Listeria monocytogenes EGD-e]  ali follow..  23  86ITTIEGLQYLTNLSELELIDNQVTDLNP--LTNLTKITELRLSGNPLKDVSA--LAGLKNL-KTMDLIYTDIT----TPLAGLSNLQVLNLDINQITDITP--LAGLSNLQFLSFGSTQVSDLTP--LANLSKLTTLNAMNSKVSDVSPTGLSNLTEVYLEENQISDVSPLA---KLPNLSIVTLTNQTIT............................................................................................................................................................................................................................................................................................................................................................................................................................................................... 263
22 -23.100IDP05423 gene: inlH; internalin H [Listeria monocytogenes EGD-e] lmo0263 [Listeria monocytogenes EGD-e]  ali follow..  21  88VTTIEGVQYLNNLIGLELKDNQITDLTP--LKNLTKITELELSGNPLKNVSA--IAGLQSI-KTLDLTSTQIT----TPLAGLSNLQVLYLDLNQITN---SPLAGLTNLQYLSIGNAQVSD---TPLANLSKLTTLKADDNKISDISPASLPNLIEVHLKNNQISDVSPLA---NTSNLFIVTLTNQTIT............................................................................................................................................................................................................................................................................................................................................................................................................................................................... 265
23 -22.800IDP00034 internalin, putative BA_1346 [Bacillus anthracis str. Ames]  ali follow..  13  8ILDYSALKYMPNLKSLTVANAKIKDPSF--FANLKQLNHLALRGNEFSDVTP--LVKMDHL-DSLDLSNNKIT----APLIEMKNVKSLYLSGNQIED---TALAKMEQLDYLNLANNKITN---APLSALKNVTYLTLAGNQIEDIKPLYSLPLTDLVLTRNKVKDLSGIE---QMKQLEELWIGKNEIKD---TPLSKMTQLKQ--LHLPNNELKD---TPLSSLVNLQKLDLEANYISDLTPLKKLVFLSFVANEIRDVRPVIELSKTAYINVQNQKVF.................................................................................................................................................................................................................................................................................................................................................................... 272
24 -22.800IDP05553 hypothetical protein lmo1136 [Listeria monocytogenes EGD-e] lmo1136 [Listeria monocytogenes EGD-e]  ali follow..  15  66ATSSVTQTQLNTIKALHFDSKGVQS---EGVEYLKNLTQVFGYGNQVSDLGP--LSNLTKL-EVIQMPRNQIS----TPIANLTALMSLDFEFNNLQT---EPIKNLTNMLELNVSANPISD---NAVKNMTQLEFLTLRDCEVSDLSPENLSNMLMFWAGRNNISDITPLK---NMSKLLGLSLFGNQIKD---SVIKNLTSLED--FDIKANQVSD---SSLATSTTLETLTLSFNQIIDISPLKNLTNLT................................................................................................................................................................................................................................................................................................................................................................................................. 299
25 -22.800IDP91619 gene: ECs2672; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB36095 [Escherichia coli O157:H7 str. Sakai]  ali follow..  12  11.TQSVQLNKITSNTESTIKQHELV-SDDAIINELSSELVSCLGNDKFT-PVSEDSNLLNML-SEFKLLREQCF-RWGNYTLLFENYGAYDKTGSITIEELLDKLTKITHSNELNLSSLSLG-SVPPLPEWIESCKELELDFNNLT-EFPQVPDGITLISVNNNLIS-----YIDSFPPKAKKIFICHNKLS-EIPALPDTAKV-----FDCSENNIK-EIRWFPKNLKEAY--IEYNKIEVIPAIPGNLKLLCMKCNPIKE......................................................................................................................................................................................................................................................................................................................................................................................... 328
26 -22.700IDP02719 gene: inlG; internalin G [Listeria monocytogenes EGD-e] lmo0262 [Listeria monocytogenes EGD-e]  ali follow..  23  6TSVLHVLLVVTAILGISLWVNASHG--------MKAQAESIAQPAPIN-----EIFTDPALADEVKTELGKTSVTDEVTQTDLNQITKLEADDKGINS---EGIQYLTNLNMLGVSSNQITNITP--LANLTNLDSLYLGDNKISDVTPSGLTQLTFVQLSINQIKDVTPLA---NLTKLNYLDLRENQIS............................................................................................................................................................................................................................................................................................................................................................................................................................................................... 177
27 -22.400IDP91625 gene: ECs2073; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB35496 [Escherichia coli O157:H7 str. Sakai]  ali follow..  17  73.NLSTQPPGLQNFTSINLDNNQLTH----DATNYDRLVKLSLNSNTLE-SINIHQGRNVSI-THISMNNNCLR---NIDIDRLSSITYFSAAHNKLEF----QLESCEWLQYLNLSHNQLTD----VTGNKEELLLLDLSHNKLASLHNALFPNLNTLLINNNLLS-EIKMFY-SNFCKVQTLNAANNQLEKINLHFLTYLSSIKS--LRLDNNKITRIDTENTSDIRSLFPIIKKSE................................................................................................................................................................................................................................................................................................................................................................................................................ 291
28 -22.300IDP91618 gene: ECs2674; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB36097 [Escherichia coli O157:H7 str. Sakai]  ali follow..  12  11.TQSVQLNKITSNTESTIKQHELV-SDDAIINELSSELVSCLGNDKFT-PVSEDCNLLNML-SEFKLLREQCF-EKNQGEGTLPIRHKLEFISTNIA-ELLDKLTKITHSNELDLSYLFLG-SVPPLPDWIESCKELELDFNNLT-EFPQVPDGITLISVNNNLIS-----HIDSFPPKAKKIFISHNKLS-ETPAIPDTAKV-----FDCGYNKIQ-EIRYFPKNLKEAR--IGYNNIEVVPAIPGNLKILFMECNPIKE......................................................................................................................................................................................................................................................................................................................................................................................... 328
29 -22.100IDP91680 INLB_LISMO [Listeria monocytogenes]  ali follow..  17  66VTDAVTQNELNSIDQIIANNSDIKS---QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNL-GWLFLDENKVK----SSLKDLKKLKSLSLEHNGISD---NGLVHLPQLESLYLGNNKITD---TVLSRLTKLDTLSLEDNQISDIVPAGLTKLQNLYLSKNHISD---LRALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGS......................................................................................................................................................................................................................................................................................................................................................................................................................................... 265
30 -20.200IDP91701 gene: SLIT3; slit homolog 3 protein precursor [Homo sapiens] NP_003053 [Homo sapiens]  ali follow..  12  43.............ASVDCHGLGLR-AVPRGI---RNAERLDLDRNNITRITKMDFAGLKNL-RVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQGIPRKAFRGITDVKNLQLDNNHIS----RALRDLEILTLNNNNIS-RILVTSFNHMPKIRTLRLHSNHLQFTLCMAPVHLRGFNVADVQKKEYVCPAPHSEPPSCNANSISCPSPCTCSNNIVDCRGKGL---------MEIPANLPEGIVEIRLEQNSIKAIPAGAFTQYKKLKRIDI-----------SKNQISDIAPDAFQGLKSLTSLVLYGNKIT----------------------EIAKGLFDG-----VSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQT.............................................................................................................................................................................................................................. 417
31 -20.100IDP05082 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo2179 [Listeria monocytogenes EGD-e]  ali follow..  26  967..............................................................................................................................................................................................................................................................................................................................................................................................................VAPVTVQYVDQNHKQIASPETLTGAYGEKFTAKQKKINNYSL--VKIPANVSGTFNEKAQTITFIYQKVTA---GRIIVNYVDKNGEKIADSIVLNGKLNSSYTTSSKKISGYKLYQTPKNATGKFLNTSQTVTYVYE------------------------------------------RTSNLSISSSNKGTENVKKLAKLPHTGDS-TTTNLWVIIGLFMLSGA--FVIMKKR.... 1152
32 -20.100IDP05549 hypothetical protein lmo0549 [Listeria monocytogenes EGD-e] lmo0549 [Listeria monocytogenes EGD-e]  ali follow..  16  46LKNVNTPKNLKASPLTIPANSTIADLFPDERTENNNFQTPTKTDWKVDDVVTVELNRMWYL--TSVATIGSIEG-----IQYLPNLYDVRLQFDK--SPFLKAPNGYSQLYRLNINNGNISDISPLTELSAPTLNDIDLGGNNISDKLPNKFPNLEEISLERNNISDVSPLA---ASTKIKIFNLDENHITDLSSLTNNKMPNLQRLYVRYQ.......................................................................................................................................................................................................................................................................................................................................................................................................................................... 269
33 -19.400IDP92552 gene: NOD2; nucleotide-binding oligomerization domain-containing protein 2 [Homo sapiens] NP_071445 [Homo sapiens]  ali follow..  16  811......LPCLGVCKALYLRDNNISDRLIECALHCEQLQKLALFNNKLTDGCAHSMAKLRQNFLALRLGNNYITAALAEGLRGNTSLQFLGFWGNRVGDELAEALGDHQSLRWLSLVGNNIGSVLALMLAKNVMLEELCLEENHLQDEGVCSLASLKILKLSNNCITYLGAEALLQALDTILEVWLRGNTFSLE............................................................................................................................................................................................................................................................................................................................................................................................................................................................. 1026
34 -18.800IDP02440 hypothetical protein lmo0331 [Listeria monocytogenes EGD-e] lmo0331 [Listeria monocytogenes EGD-e]  ali follow..  12  114IEDSTGIEYLTGLEVLNLEDNQLKS----DVSKNLNLKELTCSNNPLANLDVSKNLALEELLEYLYCPRNQLT---KLDVSKNSALRYLACDVNQLTN----DVSKNPALTNLGCTKNQLTD----DVSQNPNLGTLVCSDNQLTNLDVSQNQALENLACDNNELKN------INQALSLKELSCENNQLTNLDTTQNLALEI-----LYCDDNQLTD----DVRKNVNLLILFCNNNQLTNLAVGETIAKVRCNNNQLKD......................................................................................................................................................................................................................................................................................................................................................................................... 367
35 -18.500IDP05548 hypothetical protein lmo0409 [Listeria monocytogenes EGD-e] lmo0409 [Listeria monocytogenes EGD-e]  ali follow..  15  8FKQITTIMTVVSLLIMVLGIQGNNDVKAAPDADLAEGIRAELQKSSVTDVVT--KEELESI-SQLSVYAKKIA----EGLEYLTNLKFLNLNGNQITD---SPLSNLTKLTEIYIGDNKISD---SPLQNLTNVTDLYLVDNDISDLRPANLTQMYSLRLGGNSNISDLNP--VRNMTRLNNLEVTGSILKD---TPLADVTSLTR--LTLSDNQIED---SPLAGLTKLDNIAAYSNKITDITPLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITN---SMLEDLTNLTSLGLQNNKISD--------------SVLKNLTHVTYLQLGYNQIVDVKIIGGTNLTSLQLTQNHIT.................................................................................................................................................................................................................................................................................... 355
36 -18.200CPX_91662_05666 Complex of CADH1_HUMAN with INLA_LISMO [Undefined organism]  ali follow..  17 1015IADITPLANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTIS-----DISALSGLTSLQQLSFGNQVTDLKP-LANLTTLERLDISSNKVSD---SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKGTL-ASLTNLTDLDLANNQISNLAPLS---GLTKLTELKLGANQISNISP--LAGLTALTN--LELNENQLEDISPSNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSD--VSSLANLTNINWLSAGHNQISDLTPLANLTRITQL---LNDQAWTNAPVNYKANVSIPNTV-------------KNVTGALIAPATISDGGSYTEPDITWNLPSYT-NEVSYTFSQPVTIGKGTTTFSGTVTQPLKAIFNVKFVDEAGNLLTEPDAQTGGTKWNFSTDKMPTNDINLYAQFSINSYTATFDNTSQTVDY-WDFATSKMPAKNITLYAQYSANSYTATFDVDGKS----TTQAVDYQG-LLKEPKAPTKAGYTFKGANDITLYAQFTKNPVAPPTTGGNTPPTTNNGGNTTPPSANIPGSDTSNTSTGNSASTTSTNAYDPYNSKEASLPTTGDS--DNALYLLLGLLAVGTAMALTKKARASK.. 1683
37 -14.700IDP91566 gene: ECs1568; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB34991 [Escherichia coli O157:H7 str. Sakai]  ali follow..  12  29..TPIQIEEARASGRLYIKDCDIE-YLPQLP---NEITSVTIENCNNLTTLTGLPVNTQNL-SVINCEKLQIT-DMPSTVKNLEGIECLTVCHCYIS-GVPESVRYLNGLSSLSINSYNPENQARIDNLISPSLKTLSLTGCSNIILPEKLPESVTSVTIHAEQKTEGMPDGL................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 226
38 -10.400IDP05502 putative collagen-binding surface protein [Clostridium difficile 630] CD0386 [Peptoclostridium difficile 630]  ali follow..  15  743........................................................................................................................................................................................................................................................................................................................................................................................................QMLKEENAELIIDGKRVENDYTFIADDEAMKVEIAYTFNASELGGKNLVTFEELYDLSNPDEPVKVAEHKDIADDGQTVLITERIIKIHTTATDKDGNKELEATIIDTITLEGLKLVGWQMLKEENESDYTFTADSEKVEVAFTFDATSLDGKQLVTFEELYDLSNPDEPKKVTEHKDIEDEGQTEKPEVPEEPETPQTPEKPSRPSDSPKTGDNTNLYGLLALLLTSGAGLAGIFFYKRRKMKKS 1014
39 -9.570IDP05538 putative collagen-binding surface protein [Clostridium difficile 630] CD3392 [Peptoclostridium difficile 630]  ali follow..  15  735.............................................................................................................................................................................................................................................................................................................................................................................TKYQLKGWQMLKEENAELIIDGKRVENDYTFIADEEYTFNASALGGKNL---VTFEELYDLSNPDEPVKVAEHKDIEDDGQTVLITERIIKIHTTATDKDGNKELEAGKDVTITVTLEGLEVGTQYKLVGWQMLKEENAELLVNG-----KRVESDYTFIADSEKVEVAFTFDATSLDGKQLVTFEELYDLSNTDEPKKVTEHKDIEDEGQTITFKEKPEVPEKPEQPQTPEKSDSPKTGDSTNLMAFIVMLLVSGGGLAGTYLYKRRKMKKS 1014
40 -9.060IDP91913 cell wall surface anchor family protein [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100006539 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  11  19.....................................................................................................................................................................................................................................................................................................................................GTATIVFKDGSAITIPGNQLVA-PTAEKSTVKAPAQRVDVKDITHLTDEEKVKVAILQANGSALDGATINVAGDGTATITFPDGSVVTILGKDTVQ-----------QSAKGESVTQEATPEYKLETTPGGDKGGNTGSSDANANEGGGSQAGGSAHTGSQNSAQSQASKQLATEKESAKNAIEKAAKNKQDEIKGAPLSDKEKAELLARVEAEKQAALKEIENAKTMEDVKEAETIGVQAIAMVTVPKRPVAPNAAPKTTSAPQATYQSPAGKQLPNTGSA--SSAALASLGLVVATSGFALLGRKTRRRK. 334
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.