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Query: IDP06065 hypothetical protein jhp0520 [Helicobacter pylori J99] NP_223238 [Helicobacter pylori J99], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110
# Score Template Links and tools%idFirst MFTQWFILTIAVVFILYMGVRTFFFKTVAKRQERTNASMKLTLQEAEILIQKHQLQLQRALGNIDILTQEMSSLKTELKALKQRNSEYKGESDKYKNRIKQLEQKIEALLLast
1 -75.800IDP06065 hypothetical protein jhp0520 [Helicobacter pylori J99] NP_223238 [Helicobacter pylori J99]  ali  100  1MFTQWFILTIAVVFILYMGVRTFFFKTVAKRQERTNASMKLTLQEAEILIQKHQLQLQRALGNIDILTQEMSSLKTELKALKQRNSEYKGESDKYKNRIKQLEQKIEALL 110
2 -6.640IDP91393 chromosome segregation ATPase [Vibrio vulnificus CMCP6] VV1_1096 [Vibrio vulnificus CMCP6]  ali follow..  105.........................QNPSEQDLASIEALNQKLSKSQQLIRKLKGDLDKSVRGLRKAKAKLLEQNDTVDGLRKQKEDIEKQFEQLEREYIMISES..... 184
3 -6.060IDP91890 hypothetical protein SpneCM_06068 [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100006068 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  21.................................KNRQTITDEVLNTTDRVQAIKDDVDIIQNSLQIINQQKELIKEYQEDLTYKFKVLEKDIQTRLAVIKEMQGTED... 94
4 -6.020IDP00647 enterotoxin type A, putative SACOL1657 [Staphylococcus aureus subsp. aureus COL]  ali follow..  11  136.............................DGHQTEIELTAVKTKKKIVTIQELEVQLRNYLGYVKYYNDDEQNVEYDFYNLNGEYGREVLKMYADNKTINSDKLHLDIYL 231
5 -6.010IDP91446 HD superfamily hydrolase [Vibrio vulnificus CMCP6] VV1_0392 [Vibrio vulnificus CMCP6]  ali follow..  15  91.FYQTIITVLIAINGLIAAISVIYIKSTSEEKAEEITLNTKVENEAESRLRVVQSDLNATASDFERSLGTVDEALERLQLLETENQSLRQQIKVISERVAQLDIS..... 206
6 -5.980IDP06542 gene: divIVA; cell division initiation protein DivIVA [Enterococcus faecium DO] AFK58425 [Enterococcus faecium DO]  ali follow..  14  69.........................QSIIVAQDTADKVKTSASKESEVIVTSAQNKADELVANAELTTDAEEKARKILTDATEKARQLATETEDLKKKTRVFHQRISLML 158
7 -5.900IDP95288 cell division protein (FtsB-like) [Acinetobacter baumannii ATCC 17978] YP_001084925 [Acinetobacter baumannii ATCC 17978]  ali follow..  23  2....................................................................QQIQQQAEVNDELKERNRILAAEVFDLKNGTEAIEEHARLDL 43
8 -5.900IDP05388 hypothetical protein BA_2383 [Bacillus anthracis str. Ames] BA_2383 [Bacillus anthracis str. Ames]  ali follow..  16  5LFTKW-----TVVISIFIIFGTIFYVTNGKNNSEKATVET---ADTTTFKSKLQPKINELTTNYNDIIEKDWLPAWE----EINTNGDSVARDKLLVTMNAVSKQYENI. 101
9 -5.870IDP91703 gene: IKBKG; NF-kappa-B essential modulator isoform a [Homo sapiens] NP_003630 [Homo sapiens]  ali follow..  16  254.............................RKRGMQLEDLKQQLQQAEEALVAKQEVIDKVMETVPVLKAQADIYKADFQAERQAREKLAEKKELLQEQLEQLQREYSKL. 343
10 -5.810IDP06461 gene: I7L; I7L [Monkeypox virus Zaire-96-I-16] NP_536495 [Monkeypox virus Zaire-96-I-16]  ali follow..  16  333.....................SLFMILCTRTPPKSFKSLKKVYTFFKFLADKKMTLFKSILFNLQDLSLYIT--ETDNAGLKEYKRMEKWTKKSINVICDKLTTKLNRIV 419

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40.