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Query: IDP06193 gene: lpp20; lipoprotein [Helicobacter pylori J99] NP_224067 [Helicobacter pylori J99], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKNQVKKILGMSVVAAMVIVGCSHAPKSGISKSNKAYKEATKGAPDWVVGDLEKVAKYEKYSGVFLGRAEDLITNNDVDYSTNQATAKARANLAANLKSTLQKDLENEKTRTVDASGKRSISGTDTEKISQLVDKELIASKMLARYVGKDRVFVLVGLDKQIVDKVREELGMVKKLast
1 -85.000IDP06193 gene: lpp20; lipoprotein [Helicobacter pylori J99] NP_224067 [Helicobacter pylori J99]  ali  100  1MKNQVKKILGMSVVAAMVIVGCSHAPKSGISKSNKAYKEATKGAPDWVVGDLEKVAKYEKYSGVFLGRAEDLITNNDVDYSTNQATAKARANLAANLKSTLQKDLENEKTRTVDASGKRSISGTDTEKISQLVDKELIASKMLARYVGKDRVFVLVGLDKQIVDKVREELGMVKK 175
2 -14.900IDP05580 putative lipoprotein [Bacillus anthracis str. Ames] BA_0936 [Bacillus anthracis str. Ames]  ali follow..  20  1MLK-KLGILVLGSAVALSLVACGDSTKEASNEKKEEPKQEAKKENK................................................................................................................................. 45
3 -14.700IDP05429 hypothetical protein lmo0791 [Listeria monocytogenes EGD-e] lmo0791 [Listeria monocytogenes EGD-e]  ali follow..  10  1MKK-GLFSMVLVLAMVLVLSACGASRVEPKKAGEITVNAVVYN-----------------------------KDTDKVKDVYGEDGSKFEKEFETSFKESFISTFTASFSSDVN--LDKQVDEFYDALRKQVNEKT--SYTTKVTNDDKESPEIQFAIKGLDMKGVQTELVE... 138
4 -14.400IDP05442 putative lipoprotein [Bacillus anthracis str. Ames] BA_0171 [Bacillus anthracis str. Ames]  ali follow..  26  1MSKKLLSLFSAVIVAAFVITGCGQSDTTNKEQKENAAKENKTEKTD................................................................................................................................. 46
5 -14.400IDP02402 hypothetical protein FTT1778c [Francisella tularensis subsp. tularensis SCHU S4] FTT1778c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  1MKLRKVLIATLLGASALSLSSCWLLVGAAVGG-----------------------------GTAAYISGEYSMNMSGSVKDIYNATLKAVQSNDDFVITKKSITSVDAVVDGSIKVDSTSFYVKIEKLTDNASKVTIK--------------------DQAMSATLMDQIQK... 128
6 -14.300IDP04197 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_2510 [Clostridium perfringens ATCC 13124]  ali follow..  13  1MKK-LLVPVLVIIIFALLFVGCTNSSNSSSDSSVEIINSNQQNSNS----------NNNNSSNNDTKKSDSNNASHKDNKDNNVSNNKNTNKKLDNKAEKLLKDIKEKAVKGEIIDYDFKLGDSIYDVIDKLGK......................................... 123
7 -14.000IDP91374 outermembrane lipoprotein [Vibrio vulnificus CMCP6] VV1_1919 [Vibrio vulnificus CMCP6]  ali follow..  13  1MKN-----IGLLLLASLFLAGCTTPTHLPLSGSQAIEIRIDDQFNP----------------KHCQYLGTVTGNEGHWYSYLFFSNDTMMQGAVNDLKNNAKE........................................................................ 82
8 -13.400IDP05554 hypothetical protein CD3669 [Clostridium difficile 630] CD3669 [Peptoclostridium difficile 630]  ali follow..  1MKNKKIMLVLSILSISIFAVGCTNAQNGSDSSKKETKSNTNVEQPK------------------------EENNTEKEVPNNKAKPTPKEETKAQSATIYSFDVDKTDLIENKVDLNKIDENTLFEELQKLKVVPESAKLNSFTTKDIDGVKTGILDVSSDFTKSNLGSDAET.. 149
9 -13.000IDP05607 putative lipoprotein [Bacillus anthracis str. Ames] BA_4862 [Bacillus anthracis str. Ames]  ali follow..  1MDRMKFSMFMFLGVVLIILAACTTKSVEQVAVKEVPKEGYIILRNETVFLADDKTFETKIELQNYIEQQMNQDYPSDIVLIFKDKDAYDQLKTGDKIKVWSSQTFESYPVKMIV............................................................. 115
10 -12.800IDP05763 hypothetical protein lmo2331 [Listeria monocytogenes EGD-e] lmo2331 [Listeria monocytogenes EGD-e]  ali follow..  10  1MKKGIALLAGFMLAFSIFLTGCGGTDNTRKENHSDGSAEVKNKKDN-------NTSDEYVEDGLLLKVGEWTKDKDYDTKVTLEKIATPKIKVLGDLNMLIKDAEKEEFSGGKVPVTDPYYTIQVKYDLENTGKNVLN..................................... 143
11 -12.600IDP05588 putative lipoprotein [Bacillus anthracis str. Ames] BA_2883 [Bacillus anthracis str. Ames]  ali follow..  11  1MKVYVKIALLLTFTCIFALAACKGTDEKKETNPTSENSKNEQNTSS-------EGKKEPEVKSNTDSNSKDIVINQKSINHVKNLFELAKEGKVPNVPFAAHTGDIEEIEKAWGKADKTE....................................................... 114
12 -12.400IDP05695 hypothetical protein lmo2080 [Listeria monocytogenes EGD-e] lmo2080 [Listeria monocytogenes EGD-e]  ali follow..  10  1MMTGFKKVILPVLLVVLFLAGCNQAEVPALVLDGTITDTSLLENNNELTVNGTLTWNGEKNDYASEVMITVSSNTAVTNATTGKAMKLADIKEEDTVRAVFPQGSNITSPAPGKVSE.......................................................... 117
13 -12.300IDP05592 putative lipoprotein [Bacillus anthracis str. Ames] BA_3194 [Bacillus anthracis str. Ames]  ali follow..  1MKIL--KFGIIGALSITLLIGCTSNSNETKASNKEASTAVKEKEIV--------YENVMFEQKEVRKLEISPVNSKSSNQVVNTENIKTIFTSMES-AEKKTLLLDQEAKNYIHSKMKVTYQDNSIQEFFVWIESDSDIVIAKASDETHGEGYDLREDNSKKIIQFFEK...... 158
14 -12.300IDP05121 conserved hypothetical protein [Bacillus anthracis str. Ames] BA_0915 [Bacillus anthracis str. Ames]  ali follow..  1MLK-KFTTCILGGALVFNLSGCGNTSDKTSSESKETNSKQEEK-------------------------------------NVQTTDEAKTKENTKQKNTEQTKEKSKIKEKEYAVNKDFHTPKFDVTVKRVVERDKVGKESIGFQKPEDGHVFIVVEAEGKNITS.......... 127
15 -12.100IDP05670 hypothetical protein lmo0617 [Listeria monocytogenes EGD-e] lmo0617 [Listeria monocytogenes EGD-e]  ali follow..  19  1MKKLKSILLLGIITFALALTACGGTEDKASTEKIETAKAETK..................................................................................................................................... 43
16 -12.000IDP05267 hypothetical protein lmo0255 [Listeria monocytogenes EGD-e] lmo0255 [Listeria monocytogenes EGD-e]  ali follow..  12  1MKKF--LSILSILVLALLVTACGSDSSDKKSAKKEEKMETVT--------------------------------IADINGAKLEATFSHVGDNLRKVDQKMVYPLTALGLESGANLDDATKKQLEEQVASQYSAKESKGASL-ETKFTDEALELTMSVDLYKAD........... 131
17 -11.600IDP05486 putative lipoprotein [Bacillus anthracis str. Ames] BA_4573 [Bacillus anthracis str. Ames]  ali follow..  10  1MRAFFR-GIGPFLIVVLLLVGCQSEENKIEQKATTTKAEEKVQITK-----------------------------------------EEEKSIQDVMDKFVRTTNEKNLAESKKMPSAEDLKTQKEAAFQKGKKIELEHIDIKASKAGYVVVETKEKEIDGEITLQKKVQYAIGK 139
18 -11.500IDP05430 hypothetical protein lmo1265 [Listeria monocytogenes EGD-e] lmo1265 [Listeria monocytogenes EGD-e]  ali follow..  11  1MKN--RITMIAGIVCLSILTACSSSESVKGTTSEEQTTSQSGAEMI------------------------KANNGVVSYHGKYLKLAENMDNLEKDAPIIIKATKKSEKTTVTKETKENVFPTDFYTMSDVQINSIEKD.................................... 113
19 -11.400IDP05460 putative lipoprotein [Bacillus anthracis str. Ames] BA_0985 [Bacillus anthracis str. Ames]  ali follow..  10  1MKKI--ISICALTALSFTLIGCASTSATDKSPQAK--------------------QEHKQNAFQLNSANITDIEILQTTNNTTSKSQTDNKEMIQSIVSAVQKGTPKTITLDQKKRKSAHSTITVTYKDDAKEEFLVQITIAKDKKKDKVEGVTVNIKNTKMMKDFFK....... 152
20 -11.200IDP02678 hypothetical protein FTT1653 [Francisella tularensis subsp. tularensis SCHU S4] FTT1653 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  12  1MKKLSKLLLLITILVTIIVAGCASIND----------------------------------SNTRYENGYYIAELNYNFNDVYQATINSISSGVYNLLENSEINNKATITAVNNEDPKDRLEIIIFKISKNNTKIMIK--------------------DSIRSSALLDTINE... 133
21 -11.200IDP01447 gene: lolB; outer membrane lipoprotein LolB VC2181 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  10  6TMNALVRRLLPGLASLLLLAGCATAPLQPVNVQWQSHQVTLEQIQHYQLTGKLGY--------------IAPDQRQSFNFQWQKSPQKLSLRLSNFLGQTVLNQVDEQGARVETYDDQIYRDQDAQSLIRNLTGLDI...................................... 129
22 -11.200IDP04317 putative lipoprotein [Yersinia pestis CO92] YPO0512 [Yersinia pestis CO92]  ali follow..  10  1MRSLFRVLPIFILTGCVLLSGCSWFSSSSEAALQKRRIDLQVVAAP--INPGPNGQAQP-----IIELNKEGWSPPGLYQGTLCSGISVGGEVVSVTEYILAPTEVRQYSRDVPFEQERWWA-----IAAEFQEMSNGKSLLTLKSDARADFNRVVLVDGKAL-----SLKASTK 163
23 -11.100IDP05009 putative lipoprotein [Bacillus anthracis str. Ames] BA_4237 [Bacillus anthracis str. Ames]  ali follow..  20  1MKAW--KSIFVLCSFLLMLSGCFHQEEKKVEPKKKESIPETKEYGG................................................................................................................................. 44
24 -11.000IDP95182 hypothetical protein KPN_03558 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] YP_001337220 [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]  ali follow..  1...MKALSPLAILLSALLLQGCVAAAVVGTAAVGTKAATDPRTVGTQVDDSTLELRNVTAYQGKVLLTGQSPTPDLSARAKQIAMGVEGTTEVFNEVRQGQPIGLGTAS-------SDTWITTKVRSQLLSTDQVKSSNVKVT---TENSEVFLMGLVTDREGRAAADIASRVS. 178
25 -11.000IDP05677 hypothetical protein lmo1068 [Listeria monocytogenes EGD-e] lmo1068 [Listeria monocytogenes EGD-e]  ali follow..  11  1MKKW--MVIISIISLVALLGACGNNDNEKDQEDKSTTDSTTKKAKS---------SSNESNK-------AAETKENDTNDKAATTDKGSSNPTKEEKDTSTTTDTPKKETPKSPAKTEAFSFSPSGFKVSTVESILGGDVTTTYLSSSKSFQKLTLFINQYKVEHVINPTKEVS. 160
26 -10.900IDP05029 putative lipoprotein [Bacillus anthracis str. Ames] BA_0864 [Bacillus anthracis str. Ames]  ali follow..  13  1MKKY--TLYSLMLLTLLFLSACSNSAQPKEENDVQSIKDVTVKIPETIFT------------------------------SSKKNETINEDEMKRSIKTYLDYELYENTVPLSSAMSDEKVTESDREKLQKLIDLAQQNDANFHHFISNNTI-------KQPSKEIHDYISSSTA 142
27 -10.900IDP05010 putative lipoprotein [Bacillus anthracis str. Ames] BA_4934 [Bacillus anthracis str. Ames]  ali follow..  22  1MKKV-LMLFVLLLTASILLIGCSTKKEKAGMNLEKAQKVEIESLTD................................................................................................................................. 45
28 -10.800IDP91953 extracellular solute-binding lipoprotein [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100002215 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  1MKFRKLACTVLASAAVLGLAACGNSGGSKDAGKSGGDGAKTE----WAFPVFTQEKTGDGVGTYE--IEAFEKANPDVKVKLETIDKSGPEKITTAIEAGTAPDVLFDAPGRIIQYGKNGKLAELNDLFTDDFVKDVNNENIVQASKAGDKAYMYMAMNKKMLEDA......... 175
29 -10.700IDP02585 lipoprotein [Francisella tularensis subsp. tularensis SCHU S4] FTT1416c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  11  1MKGLKAIYIIFLAAVLAVISGCATDKGTQ------------------------------------YKDGYYITTLNYNFNTVYNATLQAIQNGQ-DISVNKNNGTDAEIVSASDSDSTDSLQVAMKKLPNNATRISIK--------------------NSIRSSALIGIIEG... 130
30 -10.700IDP05586 putative lipoprotein [Bacillus anthracis str. Ames] BA_2746 [Bacillus anthracis str. Ames]  ali follow..  11  1MKI-----LIYILMVCFLITGCSIGKKDSPNEKSEQKNVSMKNVNY--VPGVNDATAVVVGKYAIVGIDVKAKLDRTRVESIKYSVAESLKNDPDGANAVVVARLKQIGKQIKKGKTGEGILDELAAIVGRVMPQVPNDMIENKETNPIQD-----QLPKDEEQELRKEQNDQSN 193
31 -10.700IDP06159 hypothetical protein jhp0866 [Helicobacter pylori J99] NP_223584 [Helicobacter pylori J99]  ali follow..  21  2NKKHRLAFLGLIVGVLFFFSACQHRLHMGYYS............................................................................................................................................... 33
32 -10.600IDP05148 putative lipoprotein [Bacillus anthracis str. Ames] BA_0177 [Bacillus anthracis str. Ames]  ali follow..  12  1MKKI--IFVSSLVLAISLGVGCSNEKTAKTDEPKKESVQKEKEL--------------------------------TAKDVFKKTNEAFKNEEHVTMTYGVGVKAEGTEMDIVKAKMQLEPKTKNSRSEMNISGTDVV..................................... 104
33 -10.600IDP05503 putative lipoprotein [Bacillus anthracis str. Ames] BA_4863 [Bacillus anthracis str. Ames]  ali follow..  16  1MKR-----ALFFFISIFFLGSCSIWYVT------------SSESKSW................................................................................................................................ 31
34 -10.500IDP05625 putative lipoprotein [Clostridium difficile 630] CD1348 [Peptoclostridium difficile 630]  ali follow..  1MNKI--AVSFLIIATTLLSTACMDYSISAVELVDSKESAVVKKDED----------------------------------AKEETTSKMINSKKTTKIPIEIISKDEKIVKYLQIDEESSLKDKLRLILDTLSNEYFNGLDMEVEVKEKDNLVKINLIEPDKKSR.......... 129
35 -10.400IDP93852 lipoprotein [Yersinia enterocolitica subsp. enterocolitica 8081] YP_001005559 [Yersinia enterocolitica subsp. enterocolitica 8081]  ali follow..  1...MKAIFAVCAVMMALLLTGCAKPVSQDYSAFKQSKPKSILVLL-------QNQSPEVEASHGMLSQVTYPLSEAGYYVLPVAVVEETFKQLHKIFGADLYITIVQYGTSYQILTSDTRVTANAK-LVDLKTGKLL...................................... 145
36 -10.300IDP92625 ABC transporter, substrate-binding protein [Streptococcus pneumoniae str. Canada MDR_19F] SpneCMD_010100009638 [Streptococcus pneumoniae str. Canada MDR_19F]  ali follow..  1MKNWKKYASASVVALAAGLAACGNLTGNSKKAADSGDKPVIK----------------------MYQIGDKPD-------NLDELLANANKIIEEKVGAKLDGDYGKKMSVITSSGETELYKKEGKDLYKALDPAYIKGNTV------NGKIYAVFAFNGTLLAKYISGVTSYET 184
37 -10.300IDP05448 hypothetical protein lmo2594 [Listeria monocytogenes EGD-e] lmo2594 [Listeria monocytogenes EGD-e]  ali follow..  1MKKT---SIIFIFCTLLFVTACSTSENQTQATEATGTIEQVETDAILINNFKEKKDKYNPEAAIRFDIVDKYYDETGNKIKITDLNKNDDVKIILTKDFPIQETS...................................................................... 102
38 -10.300IDP00820 iron compound ABC transporter, iron compound-binding protein SACOL2167 [Staphylococcus aureus subsp. aureus COL]  ali follow..  1MRGLKTFSILGLIVALLLVAACGNTDNSSKKESSTKDTISVKDEAKRIVVLEYSFADA------VKPVGIADDGKKKRIIKPVREKIGDYTSVGTRKQPNLEEISKLK--------ADSSRHKGINKELNKIAPTLSLKSFDGDYKQNINSFKTIAKAKEKEGEKRLAEHDK... 179
39 -10.200IDP02485 hypothetical protein FTT1539c [Francisella tularensis subsp. tularensis SCHU S4] FTT1539c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  14  306................................................................ILAYGQGIQGVSAGDYGYKQAAIMARANLVTLIAGQMSTQEALTMSEDTRRIDATDIEKTLSTYYKTKANLDIVGLKTVKRWRTENIVYGVVLKWDPKQVATANKIKNFSY 440
40 -10.200IDP05658 hypothetical protein lmo0207 [Listeria monocytogenes EGD-e] lmo0207 [Listeria monocytogenes EGD-e]  ali follow..  20  1MKMLKKGTVLFVMIMAVMLVACGDKEETKT................................................................................................................................................. 31
41 -10.200IDP04240 extracellular solute-binding protein [Clostridium perfringens ATCC 13124] CPF_1077 [Clostridium perfringens ATCC 13124]  ali follow..  1MIKRKKLILSGIVCSSLILTGCGNSKEEESKETVNLTWYVIGDEPA----------------------------------DNDIVEEEVNKYLKDKINATVDGDYTKKMSVISNSGENDLLDTEGAPLKKEINKELWKGAEI------DGKIYAVWVFDKELVEKYYENIHSVND 184
42 -10.200IDP04392 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_1500 [Clostridium perfringens ATCC 13124]  ali follow..  16  1MRVL--KGVILAIIPAFLFMGCGEFSKNDVAKVSFEKLSEKEEQ................................................................................................................................... 42
43 -10.200IDP02672 hypothetical protein FTT1602 [Francisella tularensis subsp. tularensis SCHU S4] FTT1602 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  18  1MKKQ--LFAISITTALLVLSACGQTGPLYLPDEDKLNSGSTLAKSG................................................................................................................................. 44
44 -10.000IDP05507 putative lipoprotein [Bacillus anthracis str. Ames] BA_5374 [Bacillus anthracis str. Ames]  ali follow..  16  1MRKLGL-ITALFALLFSSFTGCDNSPLDKKVKEEAKRTEKEKGP------------------------KLTKMSTESFNQSISQGAKKRALAMDGIIKSAAVNSNLDLYIAVIPEHHERFGLKPLRKKLQKQLSDEHPTFD------------VRVSTDKKIFMLLEKLERKIKE 138
45 -9.820IDP05564 hypothetical protein lmo2431 [Listeria monocytogenes EGD-e] lmo2431 [Listeria monocytogenes EGD-e]  ali follow..  1MKKI--TILMLSITAALLLASCGNDTTTDMNNETTKTENKSQKKPERIIA-------TNADMNIIYALGGTVVGRQTTDASGVPDGAKKATEVGNTHDLNLEKIAS--LGADAIVASSEQNLKDVPAMEGVGPKVVLTGANSIDEIKKQTAVLGKLLGKETKAKELEANIDQ... 178
46 -9.810IDP05694 hypothetical protein lmo2007 [Listeria monocytogenes EGD-e] lmo2007 [Listeria monocytogenes EGD-e]  ali follow..  1MKK-KWGVIIASLCLLLGLSACGSDEKADANEVPTLKWYMIGTPQK----------------------------------DTEEVMKEVNKYTEEKIGVKVEGDYGKRMQTVINSGENKYLDKEGKKMKAELNDVLWEGATI------DGNIYGVYVFNKNLVDKYVTKVKNFSD 178
47 -9.800IDP04234 iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens ATCC 13124] CPF_0807 [Clostridium perfringens ATCC 13124]  ali follow..  11  1MKGLKKLAILIATLTVGMFVGCSSSKTSEEGNTSNEKRIVQSVKGE-IPANPKKIVDISGSSEELVLLGHTPV---------------ATANVDSYKTDQVPEYMAETLKDTKIVGHSMMDTADIEGILSVEPDLIIMSPRQEKIYDQLAEIAPTVIINEAKFKEVAKLFDQEEE 168
48 -9.780IDP04063 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_0514 [Clostridium perfringens ATCC 13124]  ali follow..  10  1MNKRKIVSILTTSLLVTSLVGCVGSNNKANTSSNDSKVQESVENQSDFNDLRTYVGKTYNEVSENKGTGNENIEEVA----------GKKVIVSSSYSTRMFNYNANLILELDDSKNISAVSVHFKGIEPENILENIK..................................... 129
49 -9.750IDP05631 ABC transporter, substrate-binding protein [Clostridium difficile 630] CD1979 [Peptoclostridium difficile 630]  ali follow..  1MNKKLGILGLVSVFTLATITGCSSNNNKDKNNDKDTSSKKVTMVLDWTPNTNHTGLFVALDKGYYKEEGLDVEIVQPPESGAETLVATGKADFGEQVTYAKTSEDPLPIKAVATVIQHNTSGFASPKEKNITTAKDFEGKTYGGWGSPSEEAVFKAVMKKNRADFNKLKIVNTG. 179
50 -9.740IDP05125 putative lipoprotein [Bacillus anthracis str. Ames] BA_4310 [Bacillus anthracis str. Ames]  ali follow..  1MKKL----IMTLFIAMLALAGCNTNKEEPKKEQKLE------------------------------------------AVKVAVQTNPKEIKPGEKTEVQALVTQGKEKVTDADDVKFEVWKAGDEKHEMLEGKHKGKGVAVEKTFETDGVYHIIAHTNAREMHVMPEV...... 124
51 -9.650IDP90329 hypothetical protein [Chlamydia trachomatis D/UW-3/CX] CT_548 [Chlamydia trachomatis D/UW-3/CX]  ali follow..  1MLKM--FWLNSLVFFSLLLSACG-EGIYVCPIEGDSLGDLVSSLSYELEKRGLHTRSQGTSSGYVLNIGFAYTPQKPDEKPVKHFIVSNEGRLALSAKVQLIKNRTQEILVEKCLRKSVTFDFQPDLGTANAHQLALGQFEMHNEAIKS----ASRILYSQLAETIVQQVYY... 191
52 -9.620IDP05313 putative lipoprotein [Bacillus anthracis str. Ames] BA_1061 [Bacillus anthracis str. Ames]  ali follow..  11  1MRKL----LTVIGITFLILAGCSNGDFEKEIDAGKTA--TNKEYKNALSSFERALDEKKDDSGAIVLVEQTKIMMEAVKLKEEKKIEESIQSFEKVENMK---------------DGNATLIKQAKKERTALLAILEQKKKYSEQLTKSEEL-----INKKNYAEAKETLNKLVL 150
53 -9.610IDP05466 putative lipoprotein [Bacillus anthracis str. Ames] BA_1948 [Bacillus anthracis str. Ames]  ali follow..  1...MKIKSILLACIVSIGLMGCSLVEEGKNSL-------------DYAQKATDYVNEISAFANDAPALAEKAVNDSEARKQLETKLSEIKQDIPAFNELTPPDVAKDLHQQ---VGYNEKLNTLIDTAMTKIEEGKVDVEQFKNS----------LMQTVDQVRDLKDKIQNLGQ 148
54 -9.540IDP06519 extracellular solute-binding protein, family 1 [Enterococcus faecium DO] EAN09962 [Enterococcus faecium DO]  ali follow..  1MKKRYKLVILLNITLLFSLSACGKTNEEVTANIADPMIKKATTLEVYVANGKLTNYVENAAKIY-IDLKIVNVASGTATVQMITPKLVTHEDMPDIISMAVLEKFQDAFYSADEYGFYDKYGDQFYDQKLNILRQQTSNETIIPWASDFTPALCYYQPK-EEYIQVAKALKEKT. 201
55 -9.470IDP04329 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_1466 [Clostridium perfringens ATCC 13124]  ali follow..  1MLKNKKLLLGGIIGTSSILAGCGSGGSASSSDGEGEKPVNLV----------------------WYVIGKPQN-------DGELVEEEVNKYIKDKINATVDGDYSQKMNVIANSGENDLIDSHGKDLKNVIDERLWKGAEV------DGNIYAVWVFDKELVEKYYQDIHSVDD 189
56 -9.460IDP05404 iron compound ABC transporter, iron compound-binding protein [Bacillus anthracis str. Ames] BA_5628 [Bacillus anthracis str. Ames]  ali follow..  12  1MKNFKMALLAVLVVTSVLFAACSNKEEKKADAKDAKTEER-------TVQHAKGEIKIPANPKKIADLSGSTEELLIFGMKPIITANTSQEKIDAHIEKKLKD--------VKPVGSAWGDKINIEAVAAAKPDLILVNNRQEKIYDQLSKIAPTVMLKRPKFEEVGQIFGKEKE 167
57 -9.440IDP04565 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_1805 [Clostridium perfringens ATCC 13124]  ali follow..  1MIK-KIVVAVGLAFSLSFLVGCGNKSLVEQGKAAIKQGNYEEATAIF----KAASEEDSKDKEEAESLYDLTYNYVISNKAYNEFKDVALDSLKKVEENKNKELMKEDITSLKEESVLDDFYSSMEKVNDLESEGKISEAR.................................. 142
58 -9.260IDP05078 hypothetical protein lmo1340 [Listeria monocytogenes EGD-e] lmo1340 [Listeria monocytogenes EGD-e]  ali follow..  1MKKSNFLLITILVGLVFISFGCSEEKETPKKTAKEVQGVQIKRVVGWLSKDSVLLQTKKSGVTYFEEL--------NIYNEKKRPIFNTKESI---SEVQISPDYRNILLYSAESAEKATMRIIALNDGSTVASRATKPLTTTFYWNDESPEKIMFV.................. 152
59 -9.190IDP05508 putative lipoprotein [Bacillus anthracis str. Ames] BA_5398 [Bacillus anthracis str. Ames]  ali follow..  11  1MTIRK--RTSFIWIFLFSLVACSPPNTTIDKKNDVV-------------------------------VKGTGISNLDKFEQFVLNVEQVKVDKIRIVHYTHEGDPIFQTLERSKNDASDNRKDQFDGDNKGLYKDSCKSIVKDER--ESGTTYRLIDCTNEGGPNGYDVLYVPKK 143
60 -9.190IDP05582 putative lipoprotein [Bacillus anthracis str. Ames] BA_1978 [Bacillus anthracis str. Ames]  ali follow..  12  1MKYGK--VAVVGALSVGLLTGCFGEKPEENLYTAFETAATQEKS---LVDEAKKLEKLEKEGQELYQEGKDHNDAVMKKIEQATANVDDREKVLKNEKEMLEKAQKKSVQGNIEKLEDKKLQKQAKAVEESYKNRYDAFQKMNENYTKEKELYEKLKVKETKLKEIGEKVKAVNE 180
61 -9.180IDP93848 lipoprotein [Yersinia enterocolitica subsp. enterocolitica 8081] YP_001005557 [Yersinia enterocolitica subsp. enterocolitica 8081]  ali follow..  1MMK--KIFLATTLITTVLLSGCATESSRSLEVAKVTSYGTQYNGPR-------------------ISVGKFDNRSSYMSGIFSDGVDRLGNQSKTILVTHLQQTGRFNVLERTNMEELKNEAAISGKSQQLKATYVVTG.................................... 121
62 -9.160IDP05708 hypothetical protein lmo2839 [Listeria monocytogenes EGD-e] lmo2839 [Listeria monocytogenes EGD-e]  ali follow..  1MKKKSLVLLVVVLVLSAVLAACGGKESGSKEVTIE-----------MHSSVEKERLDVINK------IADFEKENPTIKIKQIPV---EEDAFNTKVVTLARSEVSQDFAKVMDKDELIDQDAVKEVIDSVGEDKYYEGATNLVRSEDGKSYIAAIWYNKKALADA-ADIEKVAK 179
63 -9.110IDP00868 gene: yjaH; putative inner membrane protein STM4171 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  1MNSFIEWRRAFLFSGALLLTACSHNASPPPFTASGFAGDHGAVR--WRKDTNDEVHLLSVFSPW--SGSTTTSEYRWQGDTLSLIELNIYSKPPEHIRARFDAHGELSFMQREVGGQKQQLSNRAEQIRQTSDALRLGRVILRQGRWHADHTVT-PDLDSWAISHIERRQNHSSV 197
64 -9.090IDP05266 hypothetical protein lmo0047 [Listeria monocytogenes EGD-e] lmo0047 [Listeria monocytogenes EGD-e]  ali follow..  16  1MYK-KLATVGMTVLLVGALSACSFNDDKDTSSNNSNNETTSSKSSN--------------------ESSSDSLQNKSLDMSYEDAINAFKDKHAEISSVELEKSLGKYVYKVDGISNDNEYEMKFNAETKEQLSDE....................................... 118
65 -9.080IDP05398 putative phosphonate ABC transporter, phosphonate-binding protein [Bacillus anthracis str. Ames] BA_3750 [Bacillus anthracis str. Ames]  ali follow..  12  1MLKKFFAMSTTVVLAAGLLSGCGTKESSANKNADTKKGYVPKTL-----------------------VQFVPSQNADTLEAKAKPLEK----LSDKLNIPVKVSISTNYNTIVEAMASKQVDVGFLPPTAYVLAHEKKAANVIPKKDLVDFYKSEFVVKKDSNINSVKDLK.... 160
66 -9.080IDP93894 lipoprotein [Yersinia enterocolitica subsp. enterocolitica 8081] YP_001005558 [Yersinia enterocolitica subsp. enterocolitica 8081]  ali follow..  32  1...MKLTQKISLLLAASVLAGCATAPKP................................................................................................................................................... 25
67 -9.070IDP05366 putative substrate-binding family protein [Bacillus anthracis str. Ames] BA_2255 [Bacillus anthracis str. Ames]  ali follow..  11  1MTRTKNMLIFCIMLLTIIIAGCSKEEKKENDTSAKAKETTVDGTPKRVVVLTNEGAEA------VTPVGTTKPRAGDEWYPHLAKELKNTKVVGTERDINLEAVMKLQ-------GNKMRHEKIYEQLKEIAPTVYAETLR--GDWKENFTLYTKAVNKEKEGQNALNDYKK... 177
68 -9.070IDP04088 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_2931 [Clostridium perfringens ATCC 13124]  ali follow..  10  1MKKG----MILLILSSFLLVGCDSIKMDKLAANNNERVKTIANDLI---------GDIDLSLYFDGTKDEQNPKIEQQEILVDGDEILGQYLIQALIQPILPKDTKLLSFDIKDDIAIINLSKEAIVNMSATKEQATLEGIIATITQIPSINKINILVDNQMVDSLGGNF..... 166
69 -9.060IDP05089 putative prophage LambdaBa02, lipoprotein [Bacillus phage lambda Ba03] BA_4065 [Bacillus anthracis str. Ames]  ali follow..  12  3...KKILILIFTALCTLTLSACSSDSSSASKNTTK---NEAKEIPTEVRSFVTNFNGILDENGSSTNT---EKLSKDLKVVKEKGYQDKTLHVVSLIENQ-----NIKDDGTVELGNMKNFRVILDDKQKVIQKITYVGDDP---------LFSLESLKIDATKEVKDMLEDIRI 157
70 -9.040IDP04378 extracellular solute-binding protein [Clostridium perfringens ATCC 13124] CPF_2335 [Clostridium perfringens ATCC 13124]  ali follow..  1MLKFKKLTACAMLTTSVALTGCGADKTANAGEGETVK--------------------------TWYTIGQTPK-------DLDMVQEKANEYLKEKINATIDGDYTQKMGVIINSGEDELLETKGKEMKSVIDERFWEGAKI------DGKTYAVWVFTKEYVDKYYQDIHTLED 186

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. Discovering new genes with advanced homology detection. Trends Biotechnol. 2002 Aug;20(8):315-6.