Scheduled maintenance will begin on May 30th, 2025. Server will be temporarily unavailable — learn more.
current user: public
If you have questions about the server, please let us know.

Query: IDP06529 gene: acm; collagen-binding MSCRAMM Acm (Fms8) [Enterococcus faecium DO] AFK59905 [Enterococcus faecium DO], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .  320    .  330    .  340    .  350    .  360    .  370    .  380    .  390    .  400    .  410    .  420    .  430    .  440    .  450    .  460    .  470    .  480    .  490    .  500    .  510    .  520    .  530    .  540    .  550    .  560    .  570    .  580    .  590    .  600    .  610    .  620    .  630    .  640    .  650    .  660    .  670    .  680    .  690    .  700    .  710    .  720
# Score Template Links and tools%idFirst MKKCRNIILSMLFIITNITSLIPVHVYADAGRDISSNVTSLTVDPTNITDGGNIKVKFSFDEKKQNIQPGDYLWINWPSEGNIRGEGFQKEIPLMIENKNVGTLTVRKDSAQVVFNENIKNLDSVEGWGQFEIQARNVTDTGEENTGPFTVTSGDKTATVNVTKPASGSSSSVFYYKTGDMLPEDTKHIRWFLNINNNGTYVEQPVKISDEIQSGQRLDPSTFEINQIHLGEQKVYRGEEGIQQFLQDFPSATFNFSVTDNYIEITIPKNFVNLRKIMVSYKTIIENPEQINFENHSEAWFKEFNKPAVDGESFNHTVKNISASGGVNGTVRGELKIFKYINDTEIGIPNVTFELRRADEQPIQGQSSILLTSNEQGEASIKGLQVGDYVVKEKEAPNWIDFDPLSSNELKFSINENDTEGVSLPIYNKKKVTNITATKIWNGGTTPRPSIYFKLFRASTNNWEPVPDAETKRLDNGITSVTWEDIQQYDDSGNEYTFKVQEVDQNGNDYVPSGYQKIENGLVVTNENKEVISVSGQKTWEDNENQDGKRPTTITVNLLADGQPIQHKEVSEKDDWRYRFTNLPKYRDGQEIIYTVTEDNVPEYSTTIDGYNIKNSYTPEKTNISIPGSHITPWKNFPEKTEREKIRNLFSQKLQIFAHTGESSEQRSNYISKRAVPKQITNKSKSILPKTSSKKSSFAVIIGLLIVTICAGIFLQKYKKVLast
1 -186.000IDP06529 gene: acm; collagen-binding MSCRAMM Acm (Fms8) [Enterococcus faecium DO] AFK59905 [Enterococcus faecium DO]  ali  100  1MKKCRNIILSMLFIITNITSLIPVHVYADAGRDISSNVTSLTVDPTNITDGGNIKVKFSFDEKKQNIQPGDYLWINWPSEGNIRGEGFQKEIPLMIENKNVGTLTVRKDSAQVVFNENIKNLDSVEGWGQFEIQARNVTDTGEENTGPFTVTSGDKTATVNVTKPASGSSSSVFYYKTGDMLPEDTKHIRWFLNINNNGTYVEQPVKISDEIQSGQRLDPSTFEINQIHLGEQKVYRGEEGIQQFLQDFPSATFNFSVTDNYIEITIPKNFVNLRKIMVSYKTIIENPEQINFENHSEAWFKEFNKPAVDGESFNHTVKNISASGGVNGTVRGELKIFKYINDTEIGIPNVTFELRRADEQPIQGQSSILLTSNEQGEASIKGLQVGDYVVKEKEAPNWIDFDPLSSNELKFSINENDTEGVSLPIYNKKKVTNITATKIWNGGTTPRPSIYFKLFRASTNNWEPVPDAETKRLDNGITSVTWEDIQQYDDSGNEYTFKVQEVDQNGNDYVPSGYQKIENGLVVTNENKEVISVSGQKTWEDNENQDGKRPTTITVNLLADGQPIQHKEVSEKDDWRYRFTNLPKYRDGQEIIYTVTEDNVPEYSTTIDGYNIKNSYTPEKTNISIPGSHITPWKNFPEKTEREKIRNLFSQKLQIFAHTGESSEQRSNYISKRAVPKQITNKSKSILPKTSSKKSSFAVIIGLLIVTICAGIFLQKYKKV 721
2 -66.500IDP05223 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo0160 [Listeria monocytogenes EGD-e]  ali follow..  13  1MMSNLKKFGLAFLSVILLVNIFQTNFVKAATNYGSDFLKTVELLDTDFGYYDSIKVHYTWEIPNSNVKEGDTMEFVLPPELKIVTDLDFSLKDHDGNTVGHVIAKKSTGQVVITFTDFVEKNSNISGYLDFWTNWDKSLVEGNENVPVEFPVNGTTETIDVGVGGKNQIDPDESLYKYGWADAENPELIQWVVRVNYSKQNIQN-AVYEDFIGPKQVVDFNSIKAFHGEFDPDDNFTPGAEVP-----------SSAITQTTDGFKVDLGNLTDSVKISYYTTSTDNGASPNYTNKGQLT-----GDNFIKQEIEVATPTSGGGGGGEGTTGSVELTKTDDSSQKNPLEGAEFKLVNGAGATVQT----GLKTNADGKLAISNLKYDTYQLIETKAPQGYVL-----------------------------------------------------------------------------------------DASPVKFTIDD--------------THQSLFVSKENTAIKGSVSLEKV----DRDTKSLLADAEFELQDKDGNTLKTNLKTDQKGKLTVADLLPGE------YQFVETKAPGYILDTTPLKFKISTEALNVTVTKENTKKPEIPKVPVPPKKPE----------------------------KPDKIISEDSKQTALPKTGDSPLVNGWGLLLVAISASGLIALRRK... 565
3 -58.100IDP05655 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo0159 [Listeria monocytogenes EGD-e]  ali follow..  13  1MNFLKKVGLAFLSILIVASTIFQTTVVKAATSYGSQFLNTVELLDKDFGYYDNMDVHYTWSIPNSNVKAGDTMDFTLPSQLALATDLAFDVKDSKGQVVGTATVKKATNQVTLVFSDYVEKHSDVKGELDFWTAFNQKVITGNETVDLVFPLENGTTVIDVEVGEKTPVSPTETLFKYGWVDASNPSLIHWVVRVNYAKVNIPN-AVFTDIIGAKQTLNFDSIKAFHGTYSADRVFTAGAPIS-----------STNFSATSDGFSVALGNLTDSVQISYTTTTTDGGKSTQYDNTAKL------AGTDFVTKQTSTWTPASGGGGEGGGTTGSVTLTKEDAKTKATLEGAEFKLVDSKGTVLQE----NITTNASGQLSIADLKFDTYQLIETKAPTGYKLDTTPVEFTI----GENNQAITVTKENTLNTGSVELTKLDAATKATLAGATFELQ------DKEGNTLQTDLKTDENGVLKVTDLVKTDENGV--SYQFVETSAPGYKLDNSPVSVAGETDQVVKVTKENTLEVGSVELTKLDSATKATLAGATFELQDKEGNTLQTGLTTDENGVLKVTDLVP-------TYQFVETKAPGYELDTTPVSFEIVAGETDPIVKVTKENTLVPPTPVPPTPVPPTPVPPTPLPPVPYEPTVPPTKPEVPVTPKKTEKTTPIRITQSLPKTGDTNSFAGLGVI--LIALSLSGLLLKRK.. 793
4 -46.100IDP02471 hypothetical protein lmo0880 [Listeria monocytogenes EGD-e] lmo0880 [Listeria monocytogenes EGD-e]  ali follow..  12  1MKKRWLVFAIICLIITGFLS----PKAEAATDYGSSFFTNVSLQNQNFKENSKVRVAYDFVITQP-VASGETMTLTIPDQLKLINYGGFPLMDSQGNTIANATIDQVTGTITLTFTDYVNTHTDLSGSLFYNATFNSKNIQTDQVNPIAFPVKNTTTPYISKVNSGGGTGSPTIVFKQGRMDDKDLSILHWTVTLNNALTPIDN-AVYTDTLGSGQNLLGSATIK----------------YRDANKKVIATNIQPIALDADRNFELSIGALNNQSVVITYDTKITTKQK-SYTNKATLSGDNLDAVSRNATVNDYGSGGQGTGTPPAPPVKEEPPFIPAEKQPIEKTVETDFGPLEIVKDSEQNGKIKVIYKVKDGDTLPGVANKFDVSVAEIKDWNNLTSDTLQ---AGQKLQLTIEKTLLSKITVPPVQKVTSTTRVDGVVKATGVLPHTGDSNPFIPFVTGLSLIALGFTFG..................................................................................................................................................................................................................................................... 459
5 -41.500IDP05117 putative collagen-binding protein [Clostridium difficile 630] CD2831 [Peptoclostridium difficile 630]  ali follow..  13  1MKK-KALLISLIMILSMVVSTIYPTVSYASELGENSQIQSGSTNSSETESMKKISFNLTYTPTSKGIQAGDSITFKVPDVFNKVNLDYTSEC----------DKTESNGEYTLTFRELPNGQSVMQGKIGLEAYVKKVDEDTNAKIHIIDVEIKPGDKTDVPDAKGTLKKLVEGKKSTTVFMPVKNKDINYSIQVNEKQEELKD-IILYDELPEGLTLINGSVSVVTSD---------------------KEVSDFNIEQSKNSISVNFGNID-KSYTVKYKARISDKNAKHGNK--------KNVARIESDGKKIQEDDATVSIFDRGDDYLLTKGHSGATNITQVGQVINYQISINDDKSPISNVVITDNIPEGMRLTTSGEAGHDFRVVEIPMNGSWTPWSKEKIANNISYKVEEKRNESGQVDKVITGFTINLSKEEVESKDKNDEINFKKNSGLISAKKEVDKKVLNSSDNQIVKYKFKQIKEGEPVQSWVTFDANFTNVKVGETIRNVAQINGSSPPGVETTKQGYAFEAKKV----DALDKNVLSGAKFNLEDAFGNIVVKDLVSDEDGIIQSSVKN----GT---YYLVEIMAPGYEKLKDKIKVEGRIVDIGNIENIRQENPPVNPPAPPNTDEPIVNPPVPPSTDKPRKPSSSSDTEDTIVINPPVPKDDTLVNPPVPPKTGDSTTIIGEILLVIGAIVGLIVLRRNKNT. 971
6 -22.200IDP05452 collagen adhesion protein, C-terminal [Bacillus anthracis str. Sterne] BAS5207 [Bacillus anthracis str. Sterne]  ali follow..  11  14.......................AIINLSKYYDKNTSPIKFTITESQTTSATGIELTKVNAADEKETLEGAVFKI----------------VNRDTNEDARTNLVTNSEG-KLVVDDKLIETKAPTYYDVNVEPIEFTIEKGQQTLLPLTFKNSLTKGKVKLIKEDDVESSIALAGAVFTLQDANGTEIAKDLKTDEHGVLVIPDLFIETAAPEHYKLDQTPIKFTIERSQTKHVFVTATNSLTKGSVELIKVDDVEENTTLEGAVFKIVNKDGHDVRTDLTTDKNGRLVVDELPPGDYEFIETKNETPIKFTVKKGQEKIASVTATNSLTKGAVELSKVDDIDGSTLKDAVFKIVDMNGNDVRT----DLTTNKDGKISVSDLRPGDYQFVETKAPTHYDLNQ---TPINFTVEKSQTATASVTAKNSLTKGAVELTKVDDIDGTTLEGAIFKIV------DQNGNDVRTDLTTDKDGKISVSDLRP--------DYQFVETKAPTHNQTPINFTVEKSQTATASVTATNSLTKGAVELTKVDDIDGATLEGAVFKIVDMNGNDVRTDLTTDKDGKISVSDLRPGD------YQFIETKAPHYDLNQNPINFTATASVTATNSLTKGAVELMKVDDIDGTTLEGAIFKIVDSNGHDVRADLTTDKD-GKISVSDLRP-------DYQFIETKAPT------GYDLNAKPIPFTITKGQS. 693
7 -18.100IDP06520 gene: ebpCfm; pilus subunit protein EbpCfm (Fms9) [Enterococcus faecium DO] AFK59016 [Enterococcus faecium DO]  ali follow..  9  1MKNHKKILGVLFLILPLLTNSFGAKKVFAEETAAQVILHKKKMTDLPDPLIQNSGKEMSEFDQYQGL-ADISFSVNVTQEFYAQRDKGASVDAAKQAVQSLTP------------TPVASGTTDADGNVTLSLPKKQNGK--------------------------------------------------------------DAVYTIKEEPKDGVSAAANMVLAFPVYEMIKQADGSYKYGTEELDTIHLYPKNTVGNDGTLKVTKIGTAENEALNGAEFIISKEEGTPSVKKYIQSVTDGLYTWTTDQTKAKHFITGH----------------------------------------SYDIGNNDFAEASIEKGQLIVNHLEVGKYNLEEVKAPDNAEMIEKQTITPFEILANSQTPVEKTIKNDTSKEISVNIPLGIADKEGTQNKYTTFKLIDTHDAALTFDNDSSGTEQTDGFTVSVDPNYIPSLTPGGFVYHLNEKADPTKGFSNQANVDNGHTNDQTPPSVDVVTGGKRFVKVDGDVTSDQTLAGAEFVVRDQDSDTSATVFTTTSNGLIDVTGL---KYG---TYYLEETKAP------EKYVPLT----------------------------NRVAFTIDEQSYVTAGQLISPEK--------------PNKHKGTLPSTGGKGIYVYIGAGVVLLLIAGLYFARKHSQI 625
8 -17.700IDP05697 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo2178 [Listeria monocytogenes EGD-e]  ali follow..  10  549........................GVSADATIAIQPDLLKKEAGTIDYFN-NTMTWKITANSDRIKMGN-DEFS--LKSYTVRAYTDNTNSVLLTEGKDYTIDKDVTPAGFYIQLIGDYASTDKK--DFVTDIDLSDVTKTIDNKASISYYDGGIIKYVDEVTASMTPDPGMMTNGGKYGSYNSTTGNIDWIVSVNAMAKNYDN-LIFDDAIPTGLTYVEGSLQYRNVASTSEMMLYIPLNSVGTVAKTGDKNYPTKVDTTGNKLHLEFANLENSRVFIKYSTKPNENWYFYSYVQNTAKVSDNGVGEKSYSYQAYASKLTIGSGSGTATIGSLEITKVDKKDNSKKLTGAKFQLYTLEGDKAGQ----EATTDSDGKIVMDGLQSGKYKLVETEAPTGYTISDEYKDGKEITVTADIATSVTIENTEQTGSVVLLKE------DSATKDAIAGAEFELQNADGTKVADNLVSNADG--KIEVTDLAP--------DYQFVETKAPGYVLDGAEFNQEAAVIVTKENTAKTGSVVLTKE----DSVSKATLSGAEFELQNATGTKVKDNLTTNADGKLEVTDLAPGD------YKFVETKAPGYELDATPVTFTIEFNQATANVAKTGSVVLTKLDSKSRSNLAGAEFELQTKLGVSLKDKVVTEAN--QLQIDNLAP-------DYQLVETKAPT------GYDLDATPVEFTIEFNQK. 1359
9 -17.600IDP05502 putative collagen-binding surface protein [Clostridium difficile 630] CD0386 [Peptoclostridium difficile 630]  ali follow..  12  1MKKMLKRLCTGFLALATVVTALPTTPVHAESKQYWTE-ERVGIIEKVMNDGSIGSIDINTDFKNGYKTRTDASSRMSADQIS-IYSGEGQELGQFWAKLNVGNAKLQKTSSNASITDG-NGNYSIAGA-TYGVFADKDTTNENGNTDVVEVTTGTVYIRELSAPAGYKVDKTVY-----------------SLKVEAGKTATLKVSDTPKVTDTLIELFKIDMETQKDNPQGNASLAGAEFTWKYYAGFYNKENLPAEATRTWVTKTIAETDSDGTTHYTLTVEETKAPNGYLLDGAYMQAGDKSEQIKTEDGDLAVLSGSNQFSVSDKVIRGGVKIQKRDLETGDTLKDTAFDIISLNDNVKKNEVVKTIHTDIEGVASTSLLPYGKFRIVESEAPNGYLTDGAKPIDFAITENGKDLTDEAHSIYNQIKRGDIEGVKIGAGTHKRLADVPFRITSKTTGESHVVEENAELIIDGKRVENDYTFIADDEAMKVEIAYTFNASELGGKNLVT-------EELYDLSNPDEPVKVAEHKDIADDGQTVLITERIIKIHTTATDKDGNKELEAGKE--TITLEGL---EVGTQ--YKLV-LKEENAELLINGKRVESTFTADSETMKVEVAFTFDATSLDGKQPDEPKKVTEHKDIEDEGQTITFKEKPEVPEEPETPQTPEKPSRPSDSPKTGDNTNLYGLLALTSGAGLAGIFFYKRRKM. 1011
10 -17.500IDP05077 hypothetical protein lmo1115 [Listeria monocytogenes EGD-e] lmo1115 [Listeria monocytogenes EGD-e]  ali follow..  8  1MKTLRKMTTYIMVLVTICGTFFTSSTSVHASDLVLNEPTAYSYTGVSPHLGYAIT-----NPIYVMKMDGKKVFCVESGIFTTTGGGYIPESYISPKKDILSKIALGDQYVSSTIPNYQQRKAEIMAMVNRHDTLPSWHNQEVKVTVGESITLADSHGVLSGMSLESNNTNATLQQDGNNITITPNANS------NDGSITYRKVPQNEVGTSIVYTKPQHQTLVEFHLESAKQATVKVDVIKLGNVQITKVDEETGRPLPDTTMKFEYNGTSTELVT-KITITEVKAPNGYVNKGVSQVVTIEPNKTIELTFDNKTLTKAGEEAKEIEVTESEYGDVHTFKYNANVVAGVTYRIEATQDKAKKGDTVATVTTDEKGQWHSPNLYLGEYQAVEVSAPAGYILDTRPIPSLTYAGQEVELASTAIKATNEFQTLDLRLFKDEESILSWNNNQPEIEVIQGQEKVFGVFTREGYQTVSDGVASFELKLP-----GK---YYLKELEAGSHVKFTAENNNATYPIYIYQDTVAVGNETMLKI-SGVEFNYDGLGTGAIFTLENEDNEV-IQEVTIDKDGQGNFKNIP----GT---FYLKEKSASSTHYLMSEKVIRIESTKDGIKAFDEDDKLLGETSSTDEEPTILLEAELTKKDVSTGELLPNTGIRILDEEKNTIAEGRTDDK-KYYFQEYDAPT------GYQLDDTPMLFEITENGEV 820
11 -16.800IDP05538 putative collagen-binding surface protein [Clostridium difficile 630] CD3392 [Peptoclostridium difficile 630]  ali follow..  12  1MKKILKRLCTGFLAFATVVTALPSTPVHAESKQYWTE-STFNEGMMKVEGETAYCIDINTDFKNGDEVFAGAKVKENKGRYECGGYIYSGEGQELGAKLNVGNAKLQKTSSNTSITD--NGNYSIAGA-TYGVFSDKDTTDKNGNTDVIEVKAGTVYIKELSAPAGYKVDKTIY-----------------PLTIKAGETATLKVSDTPKVTDTLVELFKIDMETQKDNPQGNASLAGAEFTWKYYAGFYNKDNLPAEATRTWVTKTIAETDSDGTTHYTLTVEETKAPNGYLLDGAYMQAGDKSEQIKTEDGDLAVLTGSNQFSVSDKVIRGGVKIQKRDLETGDTLKDTAFDIISLNDNAKKNEVVKTIHTDLEGVASTSLLPYGKFRIVESEAPDGYLTDGAKPIDFAITENGKDLTDEAHSIYNQIKRGDIEGVKIGAGTHKRLADVPFRITSKTTGESHVVEENAELIIDGKRVENDYTFIADEEEMKVEISYTFNASALGGKNLVT-------EELYDLSNPDEPVKVAEHKDIEDDGQTVLITERIIKIHTTATDKDGNKELEAGKD--TVTLEGL---EVGTQ--YKLV-LKEENAELLVNGKRVESTFIADSENMKVEVAFTFDATSLDGKQTDEPKKVTEHKDIEDEGQTITFKEKPEVPEKPEQPQTPEKPSRPSDSPKTGDSTNLMAFIVMLLVSGGGLAGTYLYKRR. 1009
12 -16.700IDP06545 gene: fms18; LPXTG family cell surface protein Fms18 [Enterococcus faecium DO] AFK59452 [Enterococcus faecium DO]  ali follow..  11  1MKKNWRLLATLSLLCQTIGGSLGPTIAFADEITHPQTVTVELDLAHQYAVEGTFS-QDIF-EPGVPIYNEFTPGYEKNPLPDMSEKAKLVSVLWKEAGTDVDTHIVAQKMIWQEVNGYTLHSIKRSDGSAVNIAAIESKINQAIADYQKKPSFHNSTVKTVLGQSTTVTDTNGLNLSEFDEVVENIA--------NIDYRVNGNQLVITPNANSKESGELTLKKSANTGTPVAYKMAGQQTLMAGAIDKPNTYTIKIDVETEGSLKIKKVDKETGN--TVFHLDFGKTLPAKDVTTDKEGIATLDE-DTTPITATIKSGETISVTSKNTREKGQIILNKMGVETGTDLWNDKYSLAGNTKDSPTGEIVQEMTTDEKGHAEANALELGTYYVTETKASNGFVNTFKPVKELNYVNQTVALVTSNVKGQNQEITGETTLTKE--TAKDGQAVKWSEAFKPELVKGTKASDETVTLTLDEKNQVAVKHLA-----NE---YYWQETKAPGYTLDETKYPAVITRDVTAKEQVIRFGFDFFKFAGSAAGTAETGFNDLTFKVSPEDEAITAYNEQLGFDGYGKFENLP----GD---YLLEEVEAPGFQSTFKENKADYTKSEYIFTITEKGQKQPIKTVTVPYEKLTNKAFSVSLNRLMLYDLPEEEDSLTSLGTWKDGGKELTDLDSTELVDKLSYNLHEIYVVAQAIDVEATKAAQEKDEKA 811
13 -16.600IDP05567 pepdidoglycan bound protein [Listeria monocytogenes EGD-e] lmo2576 [Listeria monocytogenes EGD-e]  ali follow..  13  956........................TENIQVKLEQDEKVVQVMNEKMPIKETGEVHLV-KTDKATGATLAGAEFSLY------------------DKSGAELQNGLTTDENGELTIHN---------GSYYLKETKAPEGYKLSEKTWEFSVESGQVD-AIEIQAENEKDLGEAVLTKVDSETNAKLSGAKFNLLNDSGEVIQTNLVSDENGEIRVQNLEPGDYAFQE----------------------TEAPTNYDLATNTWPFTIVAGQTSATMVTAENNKTGKP-----------------------------------------DVDTGEVILVKQDSATGETLEGAVFDLMTADGAIVAS----NLTTDANGEITVTNLAPGKYSFKETKAPEGYELATDEFTIAPNQPEKITITAENTKLAPIPDAGSVKIIKQDSENGVRLAGAEFSLI----ENGETLQT---NLKTDEAGELEVNNLA-----GN---YRIQETKAPGYQEIVANDTSQVTVIAENAKLEPDVAETGAVRLIKTDSETGTRLSGAVFSLLDESGKVIQANLTTDENGEIFIDGLT----GN---YSLKETKAPGYELAEQPWNFQ------------------------VKGQVDAVIIKAENSPIIANGAISFEGDETDKIEIPVRKTDTLATEVTKLPQTGDKTSFPRVILG-GSAVLMSLLYLRKKSS. 1530
14 -16.600IDP05555 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo1413 [Listeria monocytogenes EGD-e]  ali follow..  13  140....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................QVNYVDETNQTLTYTTSPKAIDGYQVKETTTNTETIQINYVYEKTAVEGANVSVEYINEATNESIAPTETLSGKIGTTFQAEVKEIQVPSNQSGTYTD--KDTKGNQLTFETEAKSFKGYKLTKTPSNHSSVFTSDSQEVEYVYSKDDAVITPPVTPVNPDKPIINPVKPVNPATSTVPNKNISKKNTTKTVNQTGKTSTALQLPKTGDSENNLPLIIGVSLLISGVYIFTTRRKR. 437
15 -16.400IDP06530 surface protein [Enterococcus faecium DO] AFK59398 [Enterococcus faecium DO]  ali follow..  14  2........................................................................................................................................................................................................................................................................................................................................................TGFDENTGVALYD------PAESALTFTTDTEGSISVNGLIDGNYTLVETKAPDGYQLTNPQKETTFIVKNGKLQQTTGIIHGADEANLGNPNGVV---------------------NRENTTTDNTITVENVQNYGDFHFIKQDVNTQEKLEFSILRAKDPTVKLMKKIANLASGEYPYAWSDE------------------------------VTGSDWEEVKLISDSEGKFSIEGLK----GA---YCLQETKAPGYALPKNEAAYTEFTVDDDPTTSDETT--------------------------------------------------IDNQPKGILPSTGGMGIIVFILVGTALVGGAVIYFKKRHQE. 268
16 -16.200IDP01796 cell wall surface anchor family protein [Bacillus anthracis str. `Ames Ancestor`] GBAA5258 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  11  1MKRMVGKWFSFLSALIILLGIAMPQVKAEVMNRETYKMDWSYSNSKQREIKTEIIKTASGSI-----------AYCLTPDLRSPNGEDLPEMGKTSDAVYRVLLNGYPQKGPSELGVATTEEAHYATQLAVWIAANELTEEDLVAKNERVHNLMKRLVEASKKETGSQDVFFKVNPV------------------DSQTATQNGDYLETGFYAVQTNAVSGSYTIL--------------------PENAPKGLRIVNENGEEKSTLSINEKFKILLPKDTSSGNFKMKVKSTLTNLQAIAFKGSEKVQNTTVLLQRNSEKISTDLVVNWESVGSLKIMKLGEKKEVLKGAVFEVS-------NENFKQNVTTSDKGIAELGNLPIGIYSVKEIQAPAGYVLDRS-----VKKIEVKTGETAVLELKNENVKGELEITK-----------------VDVADGNTKLPNAEFTIYNEQGKEVV-----KTDEKGVAKKYTYKETIAPGYVINEE-KENGEIIKHIVQDKKVEGELEITKV---DVADGNTKLPNAEFTIYEQGKEVVKGKTNEQG---IAKFKLP----GK---YTYKETIAPGYVINEEKFGFEIKENGEIIKHIVKNKKEEK-------------ASFPSKPNKPTPNGEVKPSAD-------KPMQQPSTHNEVRLPATGGVSNQFTSLFGISFIIAGAYVLRMKNRK. 625
17 -15.900IDP05436 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo2085 [Listeria monocytogenes EGD-e]  ali follow..  14  1.......................................................MQ---RKLIGSFFILMVLLI------------------IGSTSEKVQASPTSSNG-WQLKWA-------KNNDFEDVDITDYGQNAGTTNVWMVNQAGVDAWGTTN----------------------PTGNIEVWQNGNGYNVPAFSGNNFIELNSDGIGPVYQDIRTIPGSNLTWKFSHRGRTGV-------DTADLLIGSPESQTEVSRVSNGETWGSFEGNYTVPAGQTITRLTFNPISTA---NGSLTSGNFLDDVQLYINVNGAKIGDVVWYDFNGDGIQQDSEEPAPGVKVDLL-----TKDGTFKESATTNNIGSYLFTDVLPGDYQVKFSLPNNDFIFSKANQGNDKSLNSKPDKTGIASVNVPNLKSENFDIDAG-GKVEIQKLSGDKALSGAVYAIKDNSQSEVAKITTNQNGTGTAEGLPP----GN---YTATEVTAPLGNTTPKKFTITYGDTNPVKLTFQNAEKTGSITIFKQDEANKKGLANAVFDVKIDGTTLK--KVTTNSKGYALAENLQ---PGT---YVITEVTAP------PGYEKSANEIRVTIPFNPQKTINITFSDNKIMVPLKPTPTKGSTVVKVSGETTKITALP----------------------QTGDSSSSSTIFTGLLIVVASGLFVYRR.... 561
18 -15.300IDP05657 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo0175 [Listeria monocytogenes EGD-e]  ali follow..  14  220............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TSNFTSAVNLAVSGDYSVNVQATDKAGNVSNTLNVTVHVSTPAPVAG------------ANITVNHLSNGNKIAESDTLTGV--------------NSN--YQSESKKITGYTLETTPTNATGTFTDTPQTVD---------KKDTVTPTPITVNPVEPVKPVNPVVNKPVTVKPANDNTNPSTSNSVEKTTYSSLPTTGDTDQSKSSTIFGALLLLISAPLLLFKKK. 415
19 -14.800IDP05088 LPXTG-motif cell wall anchor domain protein [Bacillus anthracis str. Ames] BA_0871 [Bacillus anthracis str. Ames]  ali follow..  11  319........................GLHQRDGFEVHNFKFNWPKWKKPAAKKGNLQIKKVDENNENIVLKDAKFDV------------------IDKENNVVDTVTTNEKG-IAEVKD---------GDYFVKEISAPEGYIKIDAPVKVTIDNTN-IIEFVIKNTKKLENGQLKLLKKDSESGQLLPGAKFDV-IDKDGKVVETIVTDDKGEALSKQLPVGSYTLKEVEAPKG----------------------YELSSSSVSVDVEANKVVTVDVVNKKI---------------------------------------------PEKVTGQFEVVKVDANDTKLLSGAEFEVYK------DGKKVAELKTGESGKVMSPKLPLGEYTVKETKAPAGYKLSDKEWKVT-----QNEKEVVKVEAENEKILGSLQIIKM--DDKDQTKRLAGAEFTLKDVKGNVVKE---GITTDKSGTVKVDGLV-----GE---YTLEETKAPGYKNVVANEVVKQDVLNEKVKEEITGQLEITKV---DANDINKKLAGAVFEIWKDGTKID--TLTSDENGKAISKELD----GD---YILKEVQAPGYELSDKEIEFTISNQKFEVVKLQITNKKETEETEKPGEETEKPGEETEKPGEETEKPGEETEKPEKPGEETEKPGGQGTSHAQQLPATGHDMNYLPFI-GFALVLLGIRLRFMTKNN. 969
20 -14.700IDP05125 putative lipoprotein [Bacillus anthracis str. Ames] BA_4310 [Bacillus anthracis str. Ames]  ali follow..  11  1MKKL---IMTLFIAMLALAGCNTNKEEPKKEQKLEAVKVAVQTNPKEIKPGEKTEVQALVTQGKEKVTDADDVKFEV-------KAGDEKHEMLEGKHKGKGVY-----AVEKTFET--------DGVYHIIAHTNARHVMPEVKVAVGNAKVEDAKKENSDHGAGHGDHKSDTMIHLMAGDIKANAESTMKVHLKQKEEALTGAEV.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 187
21 -14.600IDP06525 gene: fms17; LPXTG family cell surface protein Fms17 [Enterococcus faecium DO] AFK58157 [Enterococcus faecium DO]  ali follow..  6  24.................................................................................................................................................................................................................................................................................................................................................................................HAMSAEESGEDVVEFVLHKRMIRDIDYNDQFEYHENDGLAISEEAGETADIISQTVPLNGATFAIYDMTDYYHEKKAAENMTPKEFVQQIAETGTSVTTGKDTVGGLGDGIARIK---PKKNQDRDAVYLIFEESIDPEVGLDVDIDQTAIPIAAIKNVGYLRDPYFFKYGRQRGTTEKGKPEGAVFALYQMIEGGKYYLDMAPAN-DKNVSKFISDKEGL--TYYFEELKGVGYEMDEASKRIEVIIPEFWVDAKGQPQYVVVNGQEMAELESGKVPVSAYESATPRVYNETVKETTDKPKEPSGPSNPGQSGKWSVFPQTNEART-LISLLGILLLLGAVLLIKKERGE. 434
22 -14.500IDP06539 gene: fms13; LPXTG family cell surface protein Fms13 [Enterococcus faecium DO] AFK58158 [Enterococcus faecium DO]  ali follow..  10  1MNKIVTGMSVLLLVTAGIGIFGNGKLVKAEEVAQKPSEVTITLHKKGFSSVPEERPN---TDFGEENIPGVDFDL---AEAIEWIQKRHTESWFLKYRLTSIDKQTTNEAGEAVFST--EEAPSSRDKVYLFLETYSPAHISRIASNEIREADKQMNVEESDLRQVTIINEAGEQETISYIDLERGKTASYTITAPENGSAVIKNYKITDTPTVGLTYYDQEIEVRAGETILTKGQD------IVEVVSNGFVVTILTEENGVAKVDTLGRLAGGDLTITYNLKVSTELEADDFHNNTAVIEIGRNDEFDYEEGVEPPEKV----------TGGRKFEKYDASSSELLKDARFELWNEDRSEATSGQATEFVADGNGYFEVQGLDYGTYQMKETMAP----------------------------------------------------------------------------------------------EG----YVLPT---------------------------------------------------------------------------------------GEAAFTEFIISYGSYNEEIQIVGVENP-----------------------------------------------------------GPERVPNMKRGSLPATGGNGLLAFLLIGISLMIGAYSWYRKSKMKV 565
23 -14.300IDP91912 hypothetical protein SpneCM_07064 [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100007064 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  11  282...............................................................................................................................................................................................................................................................................................................................................................................................................YELKAPDAPGYTVEVQKTGTKEKPSFKVIYRQLPSLTVKKILEGEQSPNKSFTINVTLSDKDGKPTVTNGKAQISLKNSQETALSYLPR-------THYKVEEVENSRTGYHVTYEKTLSEDVQTIVTNHRLPTLSVTKKVTG-AFANLLQSFKITINVKDAQNK-GKATVDLKKDKTIKILDLPL------ARYSIEEEASSS-----RGYQVSYD--------------------KKEGTLDANKSATVTNNKNSVPETGIDFLSST-------------------------VLGVVLPLGGIFFIILLGHLVVNRRK.. 571
24 -14.300IDP05754 pepdidoglycan bound protein [Listeria monocytogenes EGD-e] lmo0627 [Listeria monocytogenes EGD-e]  ali follow..  17 1191........................................................................................................................................................................................................................................................................................................................................................................DGVAYGSPITVTKADDWKYEFKNVPETNYTVLENTVTNY---------------TSAVTGLDINNTLIKPDIKMINLDGQKTWKNDTENDRPASIEIQLQQNGQDY-GFPVTVTKANNWKYEFKNLPETTNDGAAYNYTIVEKAVPGYETKVDGMD-------VINTKIDAPKTAVSGEKTWKNDTAKDRPDFIEVQLLQNGQTYDPVKVTKENDWKYSFKDLPKADNNQDYRYSVAEIAVPGYKTTTDGMNLTNTKVTDEKN-VTSASGTKTWVGDNEKTRPDSIEVQLLQNGKAYGTPIKVTAKSNWKYSFTNLPEDKTGEKYSYTVSEKQVSGYSVKVKGMDLTNTLGLHLRRKSAK. 1582
25 -13.200IDP92699 Ser-Asp rich fibrinogen/bone sialoprotein-binding protein SdrE [Staphylococcus aureus subsp. aureus USA300_TCH1516] YP_001574462 [Staphylococcus aureus subsp. aureus USA300_TCH1516]  ali follow..  13  643...........................................................................................................................................................................................................................................................................................................................................................................PDGTTKSVRTDANGHYEFGGLKDGETYTVKFETPTGYLPTKVNGTTDGEKDSNGSSVTVKINGKDDEPKYNL-GDYVWEDTNKDGIQDANEVKVTLKSTGKVIG----TTTTDASGKYKFTDLD----NGN---YTVEFETPAGYTPTVKNTDSNGLTTTGVIKDADNMTLDGDYVWYDSNDSTEKGIKDVTVTLQEKGEVIG--TTKTDENGKYRFDNLD---SGK---YKVIFEKPAGLTQT.................................................................................................................. 903
26 -13.000IDP05418 conserved hypothetical protein [Bacillus anthracis str. Ames] BA_1561 [Bacillus anthracis str. Ames]  ali follow..  10  3INKWLFRFIGFLVMLVVITTLNSLNVFASVNDLAQPIASAKVIE---------VELDDYFNPNVITIPINESTTLLLKNK-TFTIKKLGIDVVVESGKEKNITVKPKSAG-TYELICRYHLLKGMEGKVIVK............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 129
27 -12.700IDP91521 C2 domain-containing protein [Toxoplasma gondii ME49] TGME49_040910 [Toxoplasma gondii ME49]  ali follow..  8 1250.......LVSTYVYICVTQKVILAQKEKQSREDAQRKARKQRRKAGHEGADNGAEDKQGAEGNEEEHGDAAAAAVAEESVSAEAVQGDEEPKKVVKKGAVPRVKKRSYDQVEGTEVAAIAIERDFF-----EAEAPDFKNLMSDVEHAINTHLGLSPGRVRAFQARYAEKRIVFAVGPPMDDATEADAVS---LRDILPSMAHEEGRFQEVTGGGATLQWDGPGTNILDRIAQEQATAGEGEQQTSEGIPTRDMQVDGTAVLEEAGEKSDKKKKKKEKKEKKEKKEKKEKKEKKEKKKKKGGETAAEPEEASAVLPADSEDGEKEQPKEKKKEKKEKKKKKDGETDAEPEEASAVLAPPPVPVPAAAIPSILLPTDGEDGEKEKTKEKKTEKKKEKHTEKKHKKKSEALPESETTAVVTVTPGEEDETSPLVPVPSSIASSEAPEPPASTRVTPAPEPKAKPGLSMGAALLAVRARSRLQRKHLAQQLSSSSSSEVSASSASSLSPSSSSSSDFAETRAKADALRARLQAAQARLAAARETEVSSSETESSETSEASFLSSDGEWDALWQSQRAAAMERQQRLQKMVSGVKAAYLEEENTRLAATRRRDDKLQRQVEAERERAVELLKEATRRAKEEKDLIARQPPPARDWSDTVVLSTPQIFVNSQAACAPFADSGRDEGGRDEWYEVSDACSRRAESS----ESRTTAGAKLRQQQLDL 1986
28 -12.500IDP01916 hypothetical protein lmo0327 [Listeria monocytogenes EGD-e] lmo0327 [Listeria monocytogenes EGD-e]  ali follow..  10  622........................NYSTSAATIPGYTLVATPANETGTFHTSDVTVNYVYKLTDLKLAQGTELK-HIQDNYATTAAVIPGYTLVATPANQSGTFGSTDIQVNYVYQAVAYK---------LTSTYKDQQGNDLALPKVDTKTYHIQDGYTTSDIAIPGYTLVAAPTNQTGTFGASDVTVNYVYKKDAQGKELKTPVIDSQKYHINDTYTTTGATIP--------TLVAAPANQSGTFGAANVTVNYVYKADDYTLTSTYKDANGKELKAPVVDSKTYHTKDNYSTSAA-TIPGYTLVAAPANQTGTFNTSNVTVNYFYKANEYTLTSTFKNVQGTELKPAIVKK-YSTSGVTIPGYTLVATPSNKKGTFGASNVT--NYVYKANGYALITTYKDTQGKDLKPLAIDTKTYNINDPYTATALNIP---------------------------TTTPANEKGVFGASDETVNYVYKATTYKDANGKELQYKTTAAVIPGYTLVAIPKNDQGANNVTVNYVYQTNDYTLTATFKDAQGNELKATEVDA----QKYHIHDTYTSKAAVIPGYTLEKTPTNETGTNYVYKANDYQLTSTFKDQQGNEIALPTVDTTKARLIPGYSLVAAPKNQIGAGTSDVTVNYVYKKDAIIKPITPAKPTILTIKTPASKVIKTKVVKQTLPKTGDDDAGLLNLLRLIGLVLILGVFLSKKLR. 1348
29 -12.400IDP92687 Ser-Asp rich fibrinogen/bone sialoprotein-binding protein SdrE [Staphylococcus aureus subsp. aureus str. Newman] YP_001331559 [Staphylococcus aureus subsp. aureus str. Newman]  ali follow..  12  273........................AAVASNNVNDLIKVTKQTIKVGD-HDGKDIEYDTEFTIDN-KVKKGDTMTINYDKNVIPSDLTDKNDTDPSGEVIAKGTFDKATKQITYTFTDYVDKYEDIKSRLTLYSYIDKKTVPNETSLNTFATAGKETSQNVTVDYQDPMVHGDSNIQSIFTKLDEDKQTIEQQIYVNPLKKSATNTKVGNIKLGNGSTIIDQNTEIKVYKVNSDQQLPQSNRIYDFSQYEDVTSQFDNKKSFSNNVATLDFGDINSAYIIKVVSKYTPTSDGELDIAQGTSMRTTDKYGYYNYAGYSNFIVTSNDTGGGDGEDVDKDGVQGTDSKEKPMANVLVTL------TYPDGTTKSVRTDANGHYEFGGLKDGETYTVKFETPTGYLPTKVNGTTDGEKDSNGSSVTVKINGKDDMSPKYNLGDYVWEDTNKD-KDVKVTLK----STGKVIG----TTTTDASGKYKFTDLD----NGN---YTVEFETPAGYTPTVKNTDSNGLTTTGVIKDADNMTLDGDYVWYD-SNKDGKQDSTVTVTLQ-NEKGEVIGTTKTDENGKYRFDNLD---SGK---YKVIFEKPAGLTQT.................................................................................................................. 903
30 -12.000IDP05461 conserved repeat domain protein [Bacillus anthracis str. Ames] BA_1618 [Bacillus anthracis str. Ames]  ali follow..  9 1263........................NIVTTQINTANIVATK-LTSTNFADVGDVITYATILTNNGNIPASNVTFTDIIPAGTIFLPNTVTINGVPIANANPANGILIANSSRTVAFQVFVPTIPSANPIANQSSTTFQYTYDPSKPAVMQMVASNTVQTTINNATITSVKSADKQFANVN-------DIITYTTTLTNNGNTLASNIVFTDAIPSGTSFIPNSVTVNGTTLSNANPANGIAIDP----------------------------NPNANTIISFQVQVNSIP----NPNPIPNQSNTTYQYVVNPNLPPASSNTLSNVITTQINNATIIATKSVNTPNAAIG---------------DIVTYTIAVTNTGNIPASATVLTD------GLGPGASFIPNSVTTFQVKILAIPPSGTLTNNALVNYEYTVNPTETPAVGSTVTNTTVTPIVDATLVINKNASTTFATI-------------------GDTITFTSV--------VTNTGNTTANNIVFTDSIPNGTTFVPNSFKINGVTVPNTNPQNSINIGNLNANASVTQVNITTLPN-----ASVIATKTGDTITYTTTLTNS---NTTANTPVFIDILPAGTITISFQAIVGSIPAINPTLNQSSTTYSIIVDPTQPPVTEIATSNPTLIQINEAIIQATKSNSFLTYTVNIGNTTATNIIFTHTVFI.............. 1984
31 -12.000IDP05612 putative lipoprotein [Bacillus anthracis str. Ames] BA_5233 [Bacillus anthracis str. Ames]  ali follow..  8  1MLKTIKNTLLFFLCLVVLSGCFTREGTIVGGKVHGGS-NSIDGKYKSFTGFATQDMD---------VKKGESWTFTFEDKTK---QGTIKAYVLDSNDNTILEVNSGNSKNNIKVSKD----EEHGGEFEISWKKEK........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 129
32 -11.800IDP05371 conserved repeat domain protein [Bacillus anthracis str. Ames] BA_3601 [Bacillus anthracis str. Ames]  ali follow..  7  327........................YAAAGFGVQIDATGPIINPVKSVAGVGDTLTYTITVPNTGTGSAENVVLRDSIPNGTTFVAGSVTVGGVTQPNANPATGINLGNTQRIVTFQVRITSFPNPNPIPNRAMVSYQFRPFVGSPLITSMSSSNTVQTTVNQATISMQKSVDLQTATLN-------DVLTYTVNVTNNGNVTANNVIFVDSIPAGTTFVANSVIVNGVARPGANPASSINLGS----------------------------NASQTTVVRFQVRVTSNPL----VNPIPNRASATFTFTPVPGQQPVSGQATSNTVVTTINIADIRTRKIVDRAFATVN---------------DVLTYTVTIENTGNVLATNVVFQD------PIPIGTTFGGSRTVTFQVRVTSTPSGGTIPNRGNVTANFVVIPNQPPITINRQTNTVVTQVNTGGLNVIKEVNTTQAVV-------------------GDTLTYTIAVQNPAAQTVVVTFDVLIIQDPENEDILNQANVTASFQVNPSEPPVTINVPSNIVNTTVQSGNFEVVKSVNTDV------------TVGDVLVYTIEIINA---SVPATNVFFQDSIPQ-LIDEIPLGNNVVNSANVTGDFLVNPTEPPITVTEPSNTVMTVVNSSGLNVIKSVSATEAGVGDTLTYTVNSGTVAATNVSFL................... 1040
33 -11.300IDP05561 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo2026 [Listeria monocytogenes EGD-e]  ali follow..  12  398....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TVKYLNEEGKILTYQTKAKEFAGYTLDESKLPTNASGVFKTNAQ--------TVTYVYKTIPASIKAHDSTMNVGDTWSAKDNFDSAVDS--------------GVA--VPFDEVKVDGSVDTTKAGVYPVTYSFAGDSVTIKVTVKATVVPAPPITPIKPVVPAPANPNTPSTQQTPTKQSGTLKIKATHQEQPIVAGNLK-LPTTGDNLSVLYSIFGFITVCLSFVLFFRLKKQ. 623
34 -11.300IDP06509 gene: fms20; LPXTG family cell surface protein Fms20 [Enterococcus faecium DO] AFK60478 [Enterococcus faecium DO]  ali follow..  9  345........................SVVPDQPEKTGVDKNGNNVNDKMLQVGDTIQYRIKQKVNRDLLAVYDRFELILPKEVNYVDAHVESGTNKKFDVSGEVTYDKTKHQVKYAAKADLKNRMKYNGELVINVKVNELANQNSVAKNQGTSIINKVEKDTNIITVYFPKIPVKEVQQNGKDVNGRNSEVQYLVTQKWHTKGVDKQFSIQDPIEARLTYKEGSAQV----------------IDKSKGKDITSEGTLTYDSNSRTLKWEASALDGREIQLIFTAKTPLQSEKNIDNQAVVAVDNVSNKTNVVTI........................................................................................................................................................................................................................................................................................................................................................................................................................ 653
35 -11.000IDP91037 gene: sdrD; Ser-Asp rich fibrinogen-binding, bone sialoprotein-binding protein [Staphylococcus aureus subsp. aureus Mu3] SAHV_0560 [Staphylococcus aureus subsp. aureus Mu3]  ali follow..  14  587.....................................................................................................................................................................................................................................................................................................................................................ELGEKGVGNVTVTVFDNNTNTKVG----EAVTKEDGSYLIPNLPNGDYRVEFSNLPKGYEVTPSKQGNNEELDSNGLSSVITVNGKDNLSPKYNLGDYVWEDTNKNGIQDQDEVTVTLKENGNVLK----TVTTDADGKYKFTDLD----NGN---YKVEFTTPEGYTPTTVTSGSDIEKDSNGLTTTGVINGAGNYVWEDT-NKDGKQDSTVTVTLKNENGEV-LQTTKTDKDGKYQFTGLE---NGT---YKVEFETPSGYTPTQVGSGTDEGIDSNGTSTTGVIKDKDNDTQDKDEKGISGVTVTLKDENDKVLKTVTTDENG--KYQFTDLNN-------TYKVEFETPSGYTPT..................... 975
36 -10.900IDP05607 putative lipoprotein [Bacillus anthracis str. Ames] BA_4862 [Bacillus anthracis str. Ames]  ali follow..  9  1MDRHMKFSMFMFLGVVLIILAACTTKSVEQVAVKEVPKEGYIILRNE-DYPSDIVLIFKDKDAYDQLKTGDKIKVSYPVKMIVEK............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 117
37 -10.900IDP05082 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo2179 [Listeria monocytogenes EGD-e]  ali follow..  14  4LKKLVSILICTLLIVSLLPFSVWADSQERDGTDVEEITTKEKVTQETTSNETNYSGDFSINSQKDVIESGQKLVINLPKNGEFNQSLNELKIA-----GATPSYNKTTRQLVYTYQT-----SGVVDKVILKMTTKNGYTPNGTKLVVTGEVTEQAETTVNATATTALSNDFTKVENSINNNPSQGDIGIWSFNLNIPKKSTGKKIVIEYTLADKLDYLGVA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 275
38 -10.500IDP00500 putative copper resistance protein YPO1784 [Yersinia pestis CO92]  ali follow..  10  3IRKVRSSCRMLSALIVLFVGLSSQQALAHAHLKAETPAADTTINAA--------ALTLGFSEG----LNFSGVKVTGPDNNVVKTGDLKLDPANNTQLILPIGHALAAGKYHVSWHVVSVDGHKTKGTYSFTVK........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 128
39 -10.100IDP05159 gene: calY; camelysin [Bacillus anthracis str. Ames] BA_1290 [Bacillus anthracis str. Ames]  ali follow..  8  1MSLKKKLGMGVASAALGLSLIGGGTFA----------FSDKEVSNNTFAAGTDLTLDPKTLVDIKDLKPGDSVKFLLKNS................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 74
40 -10.000IDP02651 gene: sipW; signal peptidase I [Bacillus anthracis str. `Ames Ancestor`] GBAA1287 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  15  1MKLIWKVISNVISFVLFALMVCLAFVVISSKASGGDSVLSGSMEPT-FLTGSIIAIE---TKDGSKYQKGDVITFKEKDE--------------------------------KIITHRIIGVKDTNGKVMYETKGDNNNGPDLEPVLAENVIG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 127
41 -10.000IDP05448 hypothetical protein lmo2594 [Listeria monocytogenes EGD-e] lmo2594 [Listeria monocytogenes EGD-e]  ali follow..  10  1MKKT---SIIFIFCTLLFVTACSTSENQTQATEATGTIEQVETDAIRFDIVDKYYDETGNKIKITDLNKNDDVKITSPAQIDP.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 108
42 -10.000IDP05667 hypothetical protein lmo0462 [Listeria monocytogenes EGD-e] lmo0462 [Listeria monocytogenes EGD-e]  ali follow..  11  1MNK--LVLSTLSVAAMGMVIFSGGTAYAADKEG-------------------NTVVEYSVE---------GDYTLVVPEKVNLSNDN-----ATEMSVKTINRNLEPGKEVEVTLSSELERVGATSDVITSSFKSNNSTVTMANPVIGSFSGYAIEETEVSKIQIGSPQGD----KKAGAYQ----TTLTFTAAFK............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 161
43 -9.940IDP06516 von Willebrand factor, type A [Enterococcus faecium DO] EAN10603 [Enterococcus faecium DO]  ali follow..  10  606........................EVVATPTTYVGRENQAYKFSPISLGEGEMVRIKYQVK--DAGAQDGNFCTVN-NMAYIQNLEDYENDITTGRMYFPSSSIRYEHKGRNFQVSKKGQNGEPLAGV-EFALYDQNPESGEAEPIETSKTTTDGIAIFETKMPILGDETGREIAGPPRYQLVDETYQFQIKKYAANEDEMLGHYELVDEYTSGSRVGGPEGKDPNSYYEGEYHKLSVVQEPNIEGTEYDELYVKLEMRNEFKPIHMNINKLIEGS--AEFELYETDGNGLEIGYPVAKGLSGVNEVEEEKGRLTFYSVDEDGKYVIVDGEKVIHPIGEPDSFVYKDSEETTNYAEYKIIESQNPEGFKEPDENDTWILRLYDNAIGTIQLKQTGEENWQYLT--------YTTDEEDRLWVAFTAYNTFDYREIRVRKLDHEGHTLDGAGFDIRKVGDSSFPLYRAYTGNPLEPEESKRLPGIGYFYSRAVGVE-EYEVSESVAPGYRLSDQ-EIIDGVLQVTLEDELAPIDLELLKI----DSMNSRRLEGAEFSIEKQNSAGEYEAPDPNDSSLFNASDLL---EGV---YRIKEVKSPSYRKLPGYFILE---------ISYREEPDIENDRVVPGKEAGTLKVEISYYPNEEAETPDLQQELEYELLETNLQLSVGNDPENPLPATGGSGRLFYILLAAFFMALAGAAYVRQSKK. 1341
44 -9.830IDP05463 spore coat-associated protein [Bacillus anthracis str. Ames] BA_1288 [Bacillus anthracis str. Ames]  ali follow..  9  1MTLKKKLGMGIASAVLGAALVGGGTFA---------FFSDKEVSNNTFATG---TLDLALNPSTSNLKPGDTVEFKLENK................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 74
45 -9.720IDP05695 hypothetical protein lmo2080 [Listeria monocytogenes EGD-e] lmo2080 [Listeria monocytogenes EGD-e]  ali follow..  10  2MTGFKKVILPVLLVVLFLAGC---NQAEVPALVLDGTITDTSLLE----NNNELTVNGTLTWNGEKNDYASEVMITVSSNTAVTNA--TTGKAMKLADIKEE------DTVRAVFPQGSNITSPAPGKVS............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 116
46 -9.660IDP02799 hypothetical protein GBAA4787 [Bacillus anthracis str. `Ames Ancestor`] GBAA4787 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  9  1MNRYTKIIVAMFLMIFTFVSTLQPLAVQAATKLADGEYSGFKVLKDTSDEESMMN---QYSVSPGTLKDGKKVSFTLTNS-----TKFETEKAGKLVATNVISEDKEKDTRVVEFD--VEDVENYHHEYDVRIAFDQNSITPIHVEQPNEKEDPANKPDPNEKPDPSQKPDQK--DPDQQPNSNTIKDGEYSIPFKVLKNQTDEESKMNTYMVNPGVLKIENGKKKAIVTLKSSSLIKNFQTEKDGAFVDAKVVSENKEKDTRVVEFEVADLS-KKLNTKVFIEMASRNYKQTHDVQLLFEQDKLEQIKNEEKQPEVEKPEVEKPEVEKPEVEKPDENKKTDAETIKDGEYSINFKALKDQTDEISMMNTYTKSPGLLKVKDGKKYVSFTLTNSSWITKFEFEKNGSFVDANVISEDKKADTEVAVDDLSKKLNAKVK---LDNQGGNDNQGGNNNQGGNNNHDDNKTIDPNALKDGEYSIGFKVLKDKTKDGKVVEVEVADLSNNNQDGTNNLNENPTVDPKNLKDGQYDIAFKVLKDKTEEISMMNQSPARLTV---KDGKKYIAMTLKNSE-----ITKFQTEKNGGFADAKVVSEDKAANTRVVE-FEANDLFAKLNAKVKVDDPTKIGAVGTVKEEPKNEPKNPVITPKVDNVKTIATPDFNRNADGKKKNEATNNDAKKEKNSKTADTAQLGLYMV---LLLGSLALLVRKYRA. 882
47 -9.570IDP05430 hypothetical protein lmo1265 [Listeria monocytogenes EGD-e] lmo1265 [Listeria monocytogenes EGD-e]  ali follow..  12  1MKNRITMIAGIVCLSILTACSSSESVKGTTSEEQTENMDNLEKDAPIIIKATDVQINSIEKDTTGKLSENMTIKVLEYSVENVLVEGEEYDLTID------GYKNMEKGEEYTLFLEKNPDGD--ISKFPVEELSEEELFLDGGQ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 196
48 -9.560IDP05670 hypothetical protein lmo0617 [Listeria monocytogenes EGD-e] lmo0617 [Listeria monocytogenes EGD-e]  ali follow..  14  1MKKLKSILLLMGIITFALALTACGGTEDKASTEKIETAKAETKKKSNPNELGDYKVEILSSEVVKDFEGNNAIAIKTKNSKENISFMVAIDQQAFQNGTQLETTVSADASMG-GSEKDVQPGGTLEVTELYKLQDTQNTVD.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 143
49 -9.540IDP05275 hypothetical protein lmo2686 [Listeria monocytogenes EGD-e] lmo2686 [Listeria monocytogenes EGD-e]  ali follow..  13  1MKE----FLFFAVFTFIMTIGVGVINASASEIENPDNIQEAEVETFDLNGNIAQEKEIVLED-------GTEGTLGVMP-----------IIDERPLLKGTYSLANGTSTWKIYWYSGV----NCSFNAKINVSKGKGKITSAYNPWYQFYSPGLDVKKSKLSKTSSGSSAS..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 147
50 -9.500IDP06524 putative competence protein ComYD [Enterococcus faecium DO] EAN10776 [Enterococcus faecium DO]  ali follow..  8  1MKALFESLLLILLLTTILSFPVLAFSAWKNELAVYQFFGQFETQKIAIVNQIQTGFYWNSEENQIIFHVPNP-VLDIPDEITLKRHASITFAARTGNESSLKAYQFKERTITYQFQ---------SGRYTKRIE........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 164
51 -9.450IDP05012 cell wall surface anchor family protein [Bacillus anthracis str. Ames] BA_5070 [Bacillus anthracis str. Ames]  ali follow..  8  21..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................VASADTGTVTKEEATQLQQDKAKKEAAIKEQQKIEEEKKRIAQEQLKNDMAKKEEAIKAQQKSEEGKKEAAQVQPKNAATKKEVAKPAVQGEKLPNT-ASNNVAMMALSACLVGIGTLFGLKRRNKV 146
52 -9.400IDP05486 putative lipoprotein [Bacillus anthracis str. Ames] BA_4573 [Bacillus anthracis str. Ames]  ali follow..  7  1MRAFFRGIGPFLIVVLLLVGCQSEENKIEQKATTTKAEEKVQITKEE-----EKSIQDVMDKFVRTTNEKNLAEH---EDLKTQKEAAFQKGNKKIELEHIDIKASKAGYVVVETKEKEID........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 124
53 -9.400IDP05417 conserved domain protein [Bacillus anthracis str. Ames] BA_4788 [Bacillus anthracis str. Ames]  ali follow..  9  1MFKQFKMIIAVFAVLFTFIATLGLQDAKAATKLADGKYN-IAFTVWKGDKDESSRMNRYFESPATLTVKNGKQYVSFKVKDSTSIKSFQVEKDGQFVETTVLSENKKDNTRVVEFE--VADLSK..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 121
54 -9.370IDP05402 gene: comGD; comG operon protein 4 [Bacillus anthracis str. Ames] BA_4463 [Bacillus anthracis str. Ames]  ali follow..  11  1MKQLLEMLLVLFAISVLSMVTYFNVHSLYEKQKIEQFLRQFSMQQLAINRQKHYTLRWHKDRHMYYIGESSIIKREYDSDIQLDLNTFPNPMTYNPSGNRGGTILLSYRSYKYEIVFQLG-----RGRFTYREMSKRVSDG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 151
55 -9.330IDP91023 hypothetical protein y2980 [Yersinia pestis KIM 10] y2980 [Yersinia pestis KIM10+]  ali follow..  10  1MNKH------LVACAASLLLVAGSASAVSFNAETGRHYTNLGFGLGTNTGGLAISGNWARSDHDGDVLGGGGLSYPINKSFSVYGEGYFAPEELTSGMKSYSEANG---GVRWNVFRPLT------GYRYINMEGKEGRRDNR.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 167
56 -9.280IDP92002 competence protein CglD [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100000145 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  7  1MIKMLESLLALSLVSILALGLSGSVQSTFAAVEEQIFFMEFETQKRSVASQQKTSLNLDGQTISNGSQ-----KLPVPKGIQAPSGQ-SITFDRAGGNSSLAKVEFQTSKGAIRYQLYLG-----NGKIKRIKETKN........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 134
57 -9.270IDP00202 putative membrane protein YPO2731 [Yersinia pestis CO92]  ali follow..  10  1MARLSGKALYVIWILLLLVTGTVQATAGHGLIRAYEHILSFDTH--RFDADGSMEMNIKVLSLGKQISRGIFRTLPL-QDGKFFSVEYQIKNVLRDGVAEPFSVTKEGETLMVRIGRADHILKPGIYNYVIQYQVSNHFSRFPDWDELYWNVTGN----------------------------------GWEYPISKASFHLE...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 187
58 -9.140IDP05411 putative chitin binding protein [Bacillus anthracis str. Ames] BA_2793 [Bacillus anthracis str. Ames]  ali follow..  14  230..............................................................................................................................................................................................................................................................................................................................................................................................................................................KVTANSIELAWTASTDNVGVKGYQIFRN-----------GEMIDTVPGTHFIDKKL----QPSTEYSYTVKAIDAAGNASKESAKLTVKTTVEAPDTEAPTTTSSVDLMWSPSDDNIGVG-----YDIYRETEGSMKKIATSNTT-SYMDKNL---LPNTTYKYVVKAVDVAGNESVQSDIFTITTKTEGVSYEE................................................................................................ 411
59 -9.080IDP91909 cell wall surface anchor family protein, partial [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100002785 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  15  46...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................LKASDKAPWSDNGEAKNPALSPLGENVKTKGQYFYQVALDGNVAGKEKQALIDQFRANGTQTY---SATVNVYGNKDGKPDLDNIVATKKVTIKINVKETSDTANGSLSPSNSGSGVTPMNHNHATGTTDSMPADT-MAASANKMSDTMMSEDKAMLPNTGETQTSMASFLGLALAGLLGGLGLKNKKE. 244
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 4 6   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;