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Query: IDP90095 ZZZ_0011 [Escherichia coli 042], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst LMTIKCLLLAVMVCPFFITACSDKYSEQDRVQAINNADAPFGAGLLTFQISSDTQLNSLNEISNSCALLFLQASDKNTLQDIMNNPVLIKQFFIGTGKVDGILKVDKYVAMPGQEITLHIDRNEGTKYVGVVAGYYPFPGKQHMLLLDIPVDVVEEGWWNKSLHASLLPLSKKISMGKESISMKLast
1 -88.900IDP90095 ZZZ_0011 [Escherichia coli 042]  ali  100  1LMTIKCLLLAVMVCPFFITACSDKYSEQDRVQAINNADAPFGAGLLTFQISSDTQLNSLNEISNSCALLFLQASDKNTLQDIMNNPVLIKQFFIGTGKVDGILKVDKYVAMPGQEITLHIDRNEGTKYVGVVAGYYPFPGKQHMLLLDIPVDVVEEGWWNKSLHASLLPLSKKISMGKESISMK 184
2 -54.700IDP04317 putative lipoprotein [Yersinia pestis CO92] YPO0512 [Yersinia pestis CO92]  ali follow..  11  1MRSFRVLPIFILTGCVLLSGCSWFSSSSEAA---------LQKRRIDLQVVAAPLINPGNGQAQPLKVCIIELNKEG-WSPPGLYQGT---LCSGISVGGEVVSVTEYILAPTEVRQYSRDVFEQERWWAIAAEFQEMSNGKSLLTLKSDARADFN---------------RVVLVDGKALSLK 159
3 -17.600IDP05670 hypothetical protein lmo0617 [Listeria monocytogenes EGD-e] lmo0617 [Listeria monocytogenes EGD-e]  ali follow..  8  3KLKSILLLMGIITFALALTACGGTEDKASTEKIETAKAETKKKSNPDYKVEILSSEVVKDFEGNNAIAIKTKFTNNSKENISFMVAIDQQAFQNGTQLETTVSADASM-VQPGGTLEELYKLQDTQNTVDIATELISFSKNSVKKSFELK.................................. 164
4 -15.200IDP05580 putative lipoprotein [Bacillus anthracis str. Ames] BA_0936 [Bacillus anthracis str. Ames]  ali follow..  11  1MLKKLGILVLGSAVALSLVACGDSTKEASNEKKEEPKQEAKKENK........................................................................................................................................... 45
5 -14.500IDP04565 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_1805 [Clostridium perfringens ATCC 13124]  ali follow..  7  1MIKKIVVAVGLAFSLSFLVGCGNKSLVEQGKAAIKQGNYEEATAIFKAASEEDSK-DKEEAESLYDLTYNYKAYNEFKLDVALDSLKKVEENKNKELMKEDITSLKEEISKDKSVLDDFYSSMEKVNDLESEGKISEARDL........................................... 144
6 -14.200IDP04197 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_2510 [Clostridium perfringens ATCC 13124]  ali follow..  8  1MKKLLVPVLVIIIFALLFVGCTNSSNSSSDSSVEIINSNQQNSNSNNNNSSNNDTKKSDSNNASH--------KDNKDNNVSNNKNTNKKLDNKAEKLLKDIKEKAVKGEIIDYDFKLGDSIYDVIDKLG...................................................... 122
7 -14.100IDP05515 putative lipoprotein [Clostridium difficile 630] CD1687 [Peptoclostridium difficile 630]  ali follow..  11  5VKKSISLMIILTIFIFMLTACEKDEQPDSVDIQTEDKN-IDEGNAKVLNIGKSEIINIDEGDKVDTSTKV---ENNSTFNISNVELIYNEYDENKKIISSDSKALLDMTLMPGKVAYIECGHKTFVKGVEVYA................................................... 136
8 -13.800IDP05121 conserved hypothetical protein [Bacillus anthracis str. Ames] BA_0915 [Bacillus anthracis str. Ames]  ali follow..  6  1MLKKFTTCILGGALVFNLSGCGNTSDKTSSESKETNSKQEEKNVQTTDEAKTKENTKQKNTEQTKFDVTVKRVVERDKVGKESIGFQKPEDGHVFIVVEAEGKNITSEPMKLAFLPSVDLVDENDNAY--ITKELKPGEVKRQNKVYVINKEKFDTGKWYVVVN------------NEYKEQIK 209
9 -13.000IDP05554 hypothetical protein CD3669 [Clostridium difficile 630] CD3669 [Peptoclostridium difficile 630]  ali follow..  8  1MNKKIMLVLSILSISIFAVGCTNAQNGSDSSKKETKSNTNVEQPKEENNTEKEVP-PTPKEETKAQSATIYSFDVDK--TDLIENKVDLNKIDENTLFEELQKLKVVPESAKLNSFTTKDIDGVKTGILDVSSDFTKSNLGSDAETLMLDS-------VARTYIKNMNVEQIKITVDGSNYE.. 178
10 -12.700IDP05267 hypothetical protein lmo0255 [Listeria monocytogenes EGD-e] lmo0255 [Listeria monocytogenes EGD-e]  ali follow..  10  1.MKKFLSILSILVLALLVTACGSDSSDKKSAKKEEKME-DINGAKLEATFSHVGD-----------NLRKVDQKMVYPLTALGLESGANLDDATKKQLEEQVASQYSAY----KGASLETKFTDEALELTMSVDLYKADKDSVASL...................................... 138
11 -12.700IDP05390 putative lipoprotein [Bacillus anthracis str. Ames] BA_2766 [Bacillus anthracis str. Ames]  ali follow..  10  1MKSIMKVTCTALLFTGLMAGCNGNTAPKQEKSAIEKNAMHYGEIVYRATVENAKFEKIDKERRITTRVMINNVRDDGQTIDLSEIKYFIQDEKTGQKYEGEAHPIYD--VPHEFSLTTDVVFELKTSYLYIDSKAAPLTDTYWKL....................................... 159
12 -12.500IDP05010 putative lipoprotein [Bacillus anthracis str. Ames] BA_4934 [Bacillus anthracis str. Ames]  ali follow..  9  1MKKVLMLFVLLLTASILLIGCSTKKEKAGM------------------NLEKAQKVEIESLTDSSEKKVITDKKEIEKLEVMKMDKWEMQSAPLDTPQGKTFKMYQEDTTKLSESSKDKKELHEIGTMT---VPYVEVEMKNKKMSFKVPEDVAK............................. 139
13 -12.400IDP05508 putative lipoprotein [Bacillus anthracis str. Ames] BA_5398 [Bacillus anthracis str. Ames]  ali follow..  13  1.MTIRKRTSFIWIFLFSLVACSPPNTTIDKKNDVVVKGTGISNLDKFEQFVL----NVEQVKVDKIRIVHYTHEGDPIFQTLERSKNDILYASDNR........................................................................................ 91
14 -12.100IDP05592 putative lipoprotein [Bacillus anthracis str. Ames] BA_3194 [Bacillus anthracis str. Ames]  ali follow..  8  1.MKILKFGIIGALSITLLIGCTSNSNETKASNKEASTAVKEKEIVYENVMFEQKEVRKLEPVNSKSSNQVVNTENIKTIFTSMESAEKKTLLLDQEAKNYIHSKM-KVTYQDNSIQEFFVWIESDSDIVIAKASGYDLREDNSKKIIQF................................... 155
15 -12.100IDP05148 putative lipoprotein [Bacillus anthracis str. Ames] BA_0177 [Bacillus anthracis str. Ames]  ali follow..  3  1.MKKIIFVSSLVLAISLGVGCSNEKTAKTDEPKKESVQKEKELTAKDVFKKTNEAFKNEEHVTMTYGV------------GVKAEGTEMDIVKAKMQLEPKTKNSRSEMNISGTDVVVYTVDGKVAGEV------KKPNTGEVITV...................................... 127
16 -11.800IDP04392 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_1500 [Clostridium perfringens ATCC 13124]  ali follow..  9  1.MRVLKGVILAIIPAFLFMGCGEFSKNDVAKVSFEKLS---EKEEQILNLTDNRVFNISKNKGYRIDLNYEVYKEGKEVKNEPILTSVSETYEKGKENSANFAGDYDLELEKGKRVCLYYATLGNGISSNVIGMNMDINRNNDCIFLSISVDDFSE............................ 202
17 -11.600IDP05009 putative lipoprotein [Bacillus anthracis str. Ames] BA_4237 [Bacillus anthracis str. Ames]  ali follow..  4  1.MKAWKSIFVLCSFLLMLSGCFHQEEKKVEPKKKESIPETKEYGGRELKKVGQKVKETGWGTPMKIHVQDVKVISLSQMSKDAKNTLKVYTALTPEEVKRRLGDKVSQEDAELYASLSGTEISDTIRYVEITYKVENSGNKN.......................................... 157
18 -11.600IDP05695 hypothetical protein lmo2080 [Listeria monocytogenes EGD-e] lmo2080 [Listeria monocytogenes EGD-e]  ali follow..  8  2MTGFKKVILPVLLVVLFLAGCNQAEVPALVLDGTITDTSLLENNN---ELTVNGTLTWNGEKNDYASEVMITVSSNTAVTNATTGKAMKLADIKEEDTVRAVFPQGSNITSPAPGKVSENATSLKVT......................................................... 125
19 -11.500IDP05607 putative lipoprotein [Bacillus anthracis str. Ames] BA_4862 [Bacillus anthracis str. Ames]  ali follow..  10  1MDRKFSMFMFLGVVLIILAACTTKSVEQVAVKEVPKEGYIILRNETVFLADDKTFETKIELQNYIEQQMNQDYPSDIVLIFKDKDAYDQLKTGDKIKVWSSQTFES----YPVKMIVEKFEIAEK........................................................... 123
20 -11.400IDP02672 hypothetical protein FTT1602 [Francisella tularensis subsp. tularensis SCHU S4] FTT1602 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  12  1.MKKQLFAISITTALLVLSACGQTGPLYLPDEDKLNSGSTLAKSGSSIMVKQNQQNNSTSTSDNQ....................................................................................................................... 64
21 -11.300IDP05460 putative lipoprotein [Bacillus anthracis str. Ames] BA_0985 [Bacillus anthracis str. Ames]  ali follow..  7  1.MKKIISICALTALSFTLIGCASTSATDKSPQAKQEH----KQNAFQLNSANITDIEILQTTNNTTSKSQTD-EMIQSIVSAVQKGTPKTITLDQKKRKSAHSTI-TVTYKDDAKEEFLVWVDNKEQITIAKVEGVTVNIKNTKMMKDF................................... 150
22 -11.200IDP05588 putative lipoprotein [Bacillus anthracis str. Ames] BA_2883 [Bacillus anthracis str. Ames]  ali follow..  10  1MYVKIALLCLTFTCIFALAACKGTDEKKETNPTSENSKNEQNTSS-KSNTDSNSKDIVINQKSINHVKNLFELAKEGKVPNVPFAAHTGDIEEIEKAWGKKTEQAGNGMYATFTNKNVSFGFNKGSQVFDVRSELKSITLQEIEKALGKPNSVKGNGEDKIYVYKVNKQFELKFIIPKSTGKVN 198
23 -11.100IDP05625 putative lipoprotein [Clostridium difficile 630] CD1348 [Peptoclostridium difficile 630]  ali follow..  10  1.MNKIAVSFLIIATTLLSTACMDYSISAVELVDSKESAVVKKDE--------DAKEETTSKMINSKKTTKI-PIEIISKDEKIVKYLQIDEESSLKDKLRLILDTLSNEYFNGLDMEVEVKEKDNLVKINLIKDDYLNEQNIIYTINNIIKN------VIQEEDNSIWIEEVEIYYNGKLIELR 178
24 -11.100IDP05125 putative lipoprotein [Bacillus anthracis str. Ames] BA_4310 [Bacillus anthracis str. Ames]  ali follow..  10  1MKK---LIMTLFIAMLALAGCNTNKEEPKKEQ---------KLEAVKVAVQTNPK-EIKPGEKTEVQALVTQVTDADDVKEVWKAGDEKHEMLEGKHKGKGVYAVEKTFETDGVYHIIAHTNAREMH......................................................... 119
25 -10.900IDP93848 lipoprotein [Yersinia enterocolitica subsp. enterocolitica 8081] YP_001005557 [Yersinia enterocolitica subsp. enterocolitica 8081]  ali follow..  11  1.MMKKIFLATTLITTVLLSGCATESSRSLEVAKVTSYGTQYNGPRSPISVGKFDNRSSYMGNQSKTIL-VTHLQQTGRFNVLERTNMELKNEAAISGKSQQLKGATYVVT--GDVTEFGRKETGDRQLFGILGRGKSQVAYAKVNLNIVNVNTSE............................. 163
26 -10.800IDP01305 lipoprotein-related protein VC1064 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  7  1.MKKVLLIVISILFGSVLVGCQMNESNKTQD----------KIQSITGSVAYRERIALPDN--AVVTVYLQDVSLADAPATVIAKQ--NFITNGMQVPLEFNLAYDSRKIKASHRYSVSARIEVDGKLR....................................................... 114
27 -10.800IDP05442 putative lipoprotein [Bacillus anthracis str. Ames] BA_0171 [Bacillus anthracis str. Ames]  ali follow..  9  1MSKKLLSLFSAVIVAAVITGCGQSDTTNKEQKENAAKENKTEKTDTTKENKPEEK................................................................................................................................. 56
28 -10.800IDP05429 hypothetical protein lmo0791 [Listeria monocytogenes EGD-e] lmo0791 [Listeria monocytogenes EGD-e]  ali follow..  6  1MKKGLFSMVLVLAMVLVLSACGASRVEPKKAGEITVNAVVYNKDTDKVKDVYGEDGSKFEKEFETSFKESFISTFTASFSSDVNLDKQVDEFYDA--LRKQVNEKTSYTTKVTNDDKESPEIQFAIKGLDMKGVQTELVEELTKAATADPSIASDDQKMAEKTMEIYTKAVQNADAVSEAKTVT 182
29 -10.700IDP91126 extracellular solute-binding protein, putative [Staphylococcus aureus subsp. aureus NCTC 8325] SAOUHSC_00176 [Staphylococcus aureus subsp. aureus NCTC 8325]  ali follow..  15  1MSKILKCITLAVVMLLIVTACGPNRSKEDIDKALNKDNSKDKPNQLTMWVDGDKQMAFYKTKKTGIKVKLVNIGQNDQLENI--------SLDAPAGKGPDIFFLAH-AYLQGLAAEIKLSKDELKGFNKQALKAMNYDNK----QLALPAIVETTALFYNK...................... 160
30 -10.600IDP91154 hypothetical protein SAOUHSC_00808 [Staphylococcus aureus subsp. aureus NCTC 8325] SAOUHSC_00808 [Staphylococcus aureus subsp. aureus NCTC 8325]  ali follow..  10  1MKK---VMGILLASTLILGACGHHQDSAKKESTSHKKKENDNEELFEAKIKEPFIINEKDEKKKYIAFK-MEITAKKDDKDLNPSSINITQDDKNTVNKKDWTEHNQDQIKKGKTAQAMFIYERGDGNINLNVHKYSEDKTVDSKSFKFSKLKTED............................ 196
31 -10.500IDP91374 outermembrane lipoprotein [Vibrio vulnificus CMCP6] VV1_1919 [Vibrio vulnificus CMCP6]  ali follow..  8  1MKN----IGLLLLASLFLAGCTTPTHLPLS-----------GSQAIEIRIDDQFNPK--------------HCQYLGTVTGNEGHWYSYLFFSNDTMMQGAVNDLKNNAKELDADTIFVIAPQAFVTSFSLLGAYR................................................ 108
32 -10.300IDP05242 hypothetical protein lmo2079 [Listeria monocytogenes EGD-e] lmo2079 [Listeria monocytogenes EGD-e]  ali follow..  13  1.MKKGILLSILLALVLVISACGESAEEKAAKTP---------QGKFVQTMKNGMNVPDQYTYTTSFAVNDINVSSTDPSAQTM------------GILKDIKLSVTTSTDKKANKSEAKFNVTSTNNLLPI..................................................... 109
33 -10.200IDP05622 ABC transporter, substrate-binding lipoprotein [Clostridium difficile 630] CD0999 [Peptoclostridium difficile 630]  ali follow..  9  1MKKYISIILLVVLTMVVLVGCSPGKDNPKNKELS-------VVKQVKVAVP-----------DGLPAVAIAKLANENPEIKEGYETVYSIEKTPEAISTRVMKKDADIAIVPSNMAAIAYNKTSSYNIVGTVGSLYLVSTENIKDYSDLVGKE-----VGCTGKGLTPDITIKSLLLQKDINYS 163
34 -10.100IDP00404 gene: virG; needle complex outer membrane lipoprotein precursor YPCD1.48 [Yersinia pestis CO92]  ali follow..  6  1.....MSRIIALIISFLLVGCATPPMPAQRIVGVRMSRPLSRIAHIDVSMFGLYEGKVREVQRTHFETGNLPLFFSIKLNPAQRGEGELYLRSTLSFPERGVQAVAQQKLTGKNKVVLQM................................................................ 116
35 -10.100IDP05430 hypothetical protein lmo1265 [Listeria monocytogenes EGD-e] lmo1265 [Listeria monocytogenes EGD-e]  ali follow..  13  1.MKNRITMIAGIVCLSILTACSSSESVKGTTSEEQTTSQSGAEMIKA-YLKLAENMDNLEKDAPIIIVQINSIEKDTTGKLSENMTIKVLENVLVEGEEYDLTIDGYKNMEKGEEYTLFLEKNPDGDNYILSNAVI................................................ 177
36 -10.100IDP05486 putative lipoprotein [Bacillus anthracis str. Ames] BA_4573 [Bacillus anthracis str. Ames]  ali follow..  6  1MRAFFRGIGPFLIVVLLLVGCQSEENKIEQKATAEEKVQITKEEEKSIQDVMDKFVRTTNEKNLAEHIELFS-KKMPSAEDLKTQKEAAFQKGNKKIELEHI----DIKASKAGYVVVETEITLQKKVQYAIG-----EEDGWKIE...................................... 147
37 -10.000IDP05183 putative lipoprotein [Bacillus anthracis str. Ames] BA_5237 [Bacillus anthracis str. Ames]  ali follow..  7  1.MKRLSYFLVFILICLVSAGCAKDKEGEKLE---------YNGRALVIGVVGEKPKDTFRN----VKFEEMKLEELEK-KSKEVDGFLIMKAHFQEASTDQYKNVFSSLKKP-ITKGIEYNSARKDVNAMYTQGFANIGSGEGQ........................................ 142
38 -9.930IDP95372 set238a-007 [Vibrio cholerae]  ali follow..  8  24SKENKMKKLFFLLLVLLVGSCSTNAAYETEQPWTWRVGVT-MPSFYPVNVTRVYGVNNKEDWPDTLYMYWVSLFDTKFYVT----KYEIPDNVKQLVATKTTYTKWNFGLLPNGQAKVWLDGCGETIYLT...................................................... 211
39 -9.900IDP05362 conserved domain protein [Bacillus anthracis str. Ames] BA_1821 [Bacillus anthracis str. Ames]  ali follow..  9  1MKRKILTLFTLICLALPIQASAY---------TFQSLPTASKSKQWYIEIDKSHSTNKQAVQTKQGVYDTYNLLVKNIGNDVSNVSVEILDNTPVSKATINPITLNNNVSKSHTSSDYMFPLDPNSHNFKVIITWEEKNFSY.......................................... 134
40 -9.770IDP04088 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_2931 [Clostridium perfringens ATCC 13124]  ali follow..  6  1MKK---GMILLILSSFLLVGCDSIKMDKLAANNNERVKTIANDLIGDIDLSL---DGTKDEQNPKIEQQEILVDGDEILGQYLIQALIQGPSQKGSLAP----------ILPKDTKLLSFDIKDDIAIINLSKEAIVNMSATKEQAT-----------IIATITQIPSINKINILVDNQMVD.. 160
41 -9.760IDP05127 putative substrate-binding family protein [Bacillus anthracis str. Ames] BA_4652 [Bacillus anthracis str. Ames]  ali follow..  10  1MKRKLFILFTIMLVVLSIVGCSSQKEESKAKEQPKTKVVKHAKGEATIPVNPKRIVDLSGSTEELLLLGHKPVGTANTLTEKLDGVKAVGWYWAPKVDLEAVTALKDLIILNNRQLKIYDQLEKVAPTVVLETNLEDW-RGKFKEVGKLFDEEKKADKWIADYDKKADSLSKKIKTKDDSFMF. 193
42 -9.640IDP02622 ABC transporter, periplasmic substrate-binding protein [Coxiella burnetii RSA 493] CBU_0109 [Coxiella burnetii RSA 493]  ali follow..  12  1MLKKLMRLLISGVMLVGLTACHQKEAKNEVRVGTIAGPETQNRYGLHVNIITFSDYNTPN-ADGSVDANMFQLKAQIEMRGYKIVSIGKTFVYPMGLYSKKITALTQ--LKTGAKIAVPSDPSNEARALLLLE................................................... 147
43 -9.630IDP91955 ABC transporter substrate-binding protein - iron transport [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100006939 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  15  1.MKNKFFLIAILAMCIVFSACSSNSVKNEENTSKEHAPDK---------IVLDHAFGQTILDKKPERVATIAWGNHDVALALGIVPVGFSKANYGVSTEEKIKELNGKANLFDDLDGLNFEAISNSKPDVILAGYSGITKEDYDTLSKIPVAAYKSKPWQTLWRDMIKIDSKALGMEKEGDEL. 182
44 -9.610IDP05454 putative lipoprotein [Bacillus anthracis str. Ames] BA_0190 [Bacillus anthracis str. Ames]  ali follow..  11  1.MRTLLSVLLALMLVPALTGCKAPAKEDTTSNKKTEADYKNVAADKKMEAKIEDHKADVNLTGDEAITKLSPLLQELKFDKGTPDQEVIDQVLNVFKLDKDYQKFEEVVFSDGTKKEYKREIK............................................................. 155
45 -9.590IDP05658 hypothetical protein lmo0207 [Listeria monocytogenes EGD-e] lmo0207 [Listeria monocytogenes EGD-e]  ali follow..  8  3MLKKGTAVLFVMIMAVMLVACGDKEETKT--------TLSQNGVDSKLTYTYKGDKVTKQTAENTMSYASLGVASKEDAEKMLKATSDKFQGIDGLKEKIEYKDDKAI-----ETLEVDYTKISSEDMNKIPGMSSNGDTSKGISMEESAKMLESQGY.......................... 148
46 -9.580IDP05483 putative lipoprotein [Bacillus anthracis str. Ames] BA_3005 [Bacillus anthracis str. Ames]  ali follow..  9  1.MRRMLLIIISAIAAFALAACTGNKVDESTSKNFIS-----------------------------KAEEIVSLLNEAKYKEVHEK---FDSKMTAALSEEKMKDLTPIIEKAGTFEKIEKQSIEEKDGLYTVILVAKYSKEQRTFIITYNDKEEIAGLVIK....................... 128
47 -9.450IDP05507 putative lipoprotein [Bacillus anthracis str. Ames] BA_5374 [Bacillus anthracis str. Ames]  ali follow..  8  1MRKLGLITALFALLFSSFTGCDNSPLDKKVKEEAKRTEKEKGPKLTKMSTESFN--QSISQGAKKRALAMDGIIKSAAVNSNLDLYIAVIPEHHERFGLKPLRKKLQKQLSD-EHPTFDVRVSTDKKIFMLLEKLER............................................... 134
48 -9.420IDP92720 hypothetical lipoprotein [Francisella tularensis subsp. tularensis SCHU S4] FTT0289c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  12  1.MKKIKLLAAYTLATLTLVSCSNNASLSNDLNSAGDSIVRFVNGTFYAEIYNTSLQSVYNATLLALNSNIYSVKNNT------------INSKDAEITGTYATDKNFFNKSGQDDFAIRLVGNQDTINLFIKIGKLGDKQASVDLLAKIQTN................................ 141
49 -9.390IDP95373 set238a-008 [Vibrio cholerae]  ali follow..  8  24SKENKMKKMILLLSVLLLNSCSTNAEYKTEQPWAWSISVT-MPSFYPANVTQVYGVNDKENWPDTLYLYWVSLFDTKFYVT----KYEIPTSVKQLIATKTTYTRRDFGLLPNGQAKVWLDGCGETIYLT...................................................... 210
50 -9.260IDP05476 putative lipoprotein [Bacillus anthracis str. Ames] BA_2745 [Bacillus anthracis str. Ames]  ali follow..  13  1.MKKSTLILCSLCLGFSMTACEQKKEVKKQTATSSTVMENQKKESININHFSNINEGMTYKEVKDLI..................................................................................................................... 66
51 -9.210IDP05563 hypothetical protein lmo2417 [Listeria monocytogenes EGD-e] lmo2417 [Listeria monocytogenes EGD-e]  ali follow..  8  1.MKKVLGLIFTLSLVLVLTACGGSSDKASSSKDDKQAKPILKDKGIDLKIVKYTDYVMPN-EEGDLDANYFQLELEEKEKGYKFADVGAIHIEPMGIYSKKVKDIKD--LKDGAQVLLSNSKSDWPRVIGIFNGLLTLKDGVKPQDATFDDIKDNPKNLKFKYDFDPAYLMTAYNNEEGDVVA. 204
52 -9.200IDP05001 putative lipoprotein [Bacillus anthracis str. Ames] BA_1090 [Bacillus anthracis str. Ames]  ali follow..  9  1.MKRVMYVVLLLSFVIGMTACNDETSSSRTLLSIGKPA--KDNVIYFTHTDNKRKIQEIQDMFQNKKWKRNETFSTVNKTPDVVFSIDEDNTGLPALYVTVYFHEDGADVLNLYGEYTSFNKQELAMLREKMSAYYP............................................... 134
53 -9.160IDP04564 putative lipoprotein [Clostridium perfringens ATCC 13124] CPF_1610 [Clostridium perfringens ATCC 13124]  ali follow..  11  1.MKKVSLIFIALSFALLFLGCGNNNEASRYSSTGDRDTMESFGVDGQFAIYKFSDENFNK------KLDLYDTKNQDAIDIIS-----------------NYKEIEPYVYTIGEKGYTKLNYANGN.......................................................... 102
54 -9.160IDP95374 set238a-009 [Vibrio cholerae]  ali follow..  6  25.KENKMKKMILVLAILLLNSCVTNASSEPSQP----RVSVTMPSFYPVNVTQVYGVNNKEDWPDTLYLYWVSLFDTKFYVT----KYDIPENVKKFISTEVSYTRIDFGLLPNGQAKVWLGGCGQTTFLA...................................................... 208
55 -9.150IDP06519 extracellular solute-binding protein, family 1 [Enterococcus faecium DO] EAN09962 [Enterococcus faecium DO]  ali follow..  8  1MKKRYVIALLNITLLFSLSACGKTNEEVTANIADPMIK-RKTGANIDLKIVNVASGTATTHEDMPDIISMADTSAAGVLEKFQDAFYSADEYGFYDKYGDQFYDQKLNILRQQTSNETIIPWASDFTPALCYIGVDFEEISSWEEYIQVAKALKEK............................ 200
56 -9.110IDP00755 gene: sirA; iron compound ABC transporter, iron compound-binding protein SirA SACOL0099 [Staphylococcus aureus subsp. aureus COL]  ali follow..  12  1MNKVIKMLVVTLAFLLVLAGCSGNSNKQSSDNKDKETT------------SIKHAMGTTEIKGKPKRVVTLYQGATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKDTKIVGQEPAPNLEEISKLK---LIVASKVRNEKVYDQLSKIAPT................................ 139
57 -9.100IDP95354 hypothetical protein [Vibrio cholerae] WP_000753349 [Vibrio cholerae]  ali follow..  8  1.....MKKTLVILSLFLVNACTSNAASVPGEP----YVGVTMPSFYPVRVTQVYGVNNKEDWPDTLYVYWVSLFDTKFYVT----KYDIPDNVKQLSATEVGYTRSDFGLLPNGQAKVWLSGCGETIYLTELAP.................................................. 185
58 -9.060IDP05677 hypothetical protein lmo1068 [Listeria monocytogenes EGD-e] lmo1068 [Listeria monocytogenes EGD-e]  ali follow..  9  1.MKKWMVIISIISLVALLGACGNNDNEKDQEDKSTTDSTTKKAKSSSNESNKAAETKENDTNDKA....................................................................................................................... 64
59 -9.010IDP06088 hypothetical protein jhp0340 [Helicobacter pylori J99] NP_223059 [Helicobacter pylori J99]  ali follow..  8  1....MKNLSTLLVFLFFCLGCVSNFNEDT-----------TLDLVLEKKIQASRKGEITQDNVPIITAIATHLNDVDSGTYYDHEYFLVNDWIDDGYISYELFGTKPTGSEPLWVREI--TRDEFDGILETTNRWSRA-------LIAFDKLDYLAVQEAKLELDAYSLGKIVFNFAYQVPLPQ 168
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. Discovering new genes with advanced homology detection. Trends Biotechnol. 2002 Aug;20(8):315-6.