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Query: IDP90382 hypothetical protein [Chlamydia trachomatis D/UW-3/CX] CT_350 [Chlamydia trachomatis D/UW-3/CX], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MGLSRLAFISFLSFTLSASCDFPSSVSQRILFSCRKSVPQALEAYLEASATYQQHDFSVLRVIAESYLQQSFLSEDTYIRKSAIIGAGLSGSSEALELLSEAIETQDLYEQLLILNAATSQLSKTSDKLLFKGLTASHPVIRLEAAYRLACMKNSKVSDYLYSFIYKLPEEIQNLAATIFLQLETEEADAYIHHLLSSPNNLTRNYVAYLIGEYKQKRFLPTLRSLLTSASPLDQEGALYALGKLEDSGSYPRIKALSSRSNPEVVLAAAQTLLFLEKEEEALPILTNLCQQKLLRALYTARFLSQEKGEELLLPIFYNATQEEIRLNTALALVHQGCTDPQVLHYLTEILESKVLHRIFLPTHSTGKAIQFWKECTTFPLMSQEDKMRTLAMYRVAEDTILSALLKLPNDAYLPYLERILASQKTILAAKAIAFLSVTAHPQALSLVSKAALTPGDPIIRAYANLALYTMTKDPEKKAVLYRYAEQLIEDTILFTDAENPLPSPSSSYLRYQVSPETRTQLMLAILETLVSSKTDEDIRVFLSLMKKTHYKNIPILSGLLMRIVELast
1 -121.000IDP90382 hypothetical protein [Chlamydia trachomatis D/UW-3/CX] CT_350 [Chlamydia trachomatis D/UW-3/CX]  ali  100  1MGLSRLAFISFLSFTLSASCDFPSSVSQRILFSCRKSVPQALEAYLEASATYQQHDFSVLRVIAESYLQQSFLSEDTYIRKSAIIGAGLSGSSEALELLSEAIETQDLYEQLLILNAATSQLSKTSDKLLFKGLTASHPVIRLEAAYRLACMKNSKVSDYLYSFIYKLPEEIQNLAATIFLQLETEEADAYIHHLLSSPNNLTRNYVAYLIGEYKQKRFLPTLRSLLTSASPLDQEGALYALGKLEDSGSYPRIKALSSRSNPEVVLAAAQTLLFLEKEEEALPILTNLCQQKLLRALYTARFLSQEKGEELLLPIFYNATQEEIRLNTALALVHQGCTDPQVLHYLTEILESKVLHRIFLPTHSTGKAIQFWKECTTFPLMSQEDKMRTLAMYRVAEDTILSALLKLPNDAYLPYLERILASQKTILAAKAIAFLSVTAHPQALSLVSKAALTPGDPIIRAYANLALYTMTKDPEKKAVLYRYAEQLIEDTILFTDAENPLPSPSSSYLRYQVSPETRTQLMLAILETLVSSKTDEDIRVFLSLMKKTHYKNIPILSGLLMRIVE 566
2 -66.900IDP90389 hypothetical protein [Chlamydia trachomatis D/UW-3/CX] CT_384 [Chlamydia trachomatis D/UW-3/CX]  ali follow..  12  20...RTAAQEAKTSLSSDCSLLEARLALRALAKHHESAWREAFLRSQERFPSLE-ADRDIHEDLAASLLQKNIRHSSLTVRVITILAVGMARDYRLVPIVLQALSDDSDTVREIAVQVAVMYGSSCLLRAVGDLANDSSIQVRITAYRAAAVLEIQDLVPHLRVVVQNTQLTERREAWRSLCVLTRPHSGVL-------TGIDQALMTCEMLKEYPEKCTEEQIRTLLAADHPEVQVATLQIILRGGRVFRSSSIMEACNSLSARVQMQAAAILYLEGDPFGEDKLTEGLSATSSILCEAASEAVCSLGGVHLAGRFLSKVQGMRSRVNLAFALLVSREKVEEAGDVVASFIHRIEPCRAIEQFLCEDQKIFVASSPLQVEIMKRD-----------LAKKIIRLLVAAQYSKAKMVVAQYLAGQQVGWSFCSEVFWEEGDSEDFVEPL-----QEESFAFALEKALSF------------------------------LQREGGEAGLHAVISLYPHSRWQDKLTILEAIAYSENRIATCFLRERCLQEAASLQSAAAGAVFALFK 539
3 -22.400IDP91695 gene: KPNA1; importin subunit alpha-1 [Homo sapiens] NP_002255 [Homo sapiens]  ali follow..  9  20.................NPDEMRRRREEEGLQLRKQKREEQLFKRRNVATAEEETE-MAPGGVITSDMIEMIFSKSPEQQLSATQKFRKLLSKEVARFVEFLKRKENCTLQFESAWVLTNIASGNAVPIFIELLSSEFEDVQEQAVWALGNI-DCNILPPLLQLFSKQNRTMTRNAVWALSNL-VSPCLNVLSWLLFVSDTDVLADACWALSYLSDAGVCRRLVELLMHNDYKVVSPALRAVGNI-NCSALQSLLHLLSSPKESIKKEACWTISNIGNRAQIQTVIDA--------------------NIFPALISILQTAEFRTRKEAAWAITNATSGELGCIKPLCDLLTVMDSKIVQVALNGLENILRLGE-----------------QEAKRNGTGINPYCALIEEAYGLDKIEFLQSHENQEIYQKAFDLIEHYFGTE........................................................................................................................... 507
4 -19.600IDP92583 beta adaptin protein, putative [Toxoplasma gondii ME49] TGME49_040870 [Toxoplasma gondii ME49]  ali follow..  10  15................................................................LHELKEELHSSNKEKKKEAVKKVIAA--SSLFPDVVNCMQTTNMELKKLVYLYVINYAKAQAINTFRKDSLDPNPLIRALAVRTMGCIRLEEITEYL---------------------------VEPLRRSCKDPDPYVRKTAAICVAKLGEEGFIEELTTMLSDSNPVVVANAVAALSEISENSGVNKLLAALNECTEWGQVFILDALAQFEPETPLDRVTARLSHANSAVVLSAIKVVMKLLDKVTNPLVTLLSAEPEIQYVALRNIELIVQKRPSILASEVKMFYNDPVYVKIEKLDILVRLVSEKNVDQVLSELKE----YATEVDVDFVRKAVRCIGRCAIK-CVAVLLDLIQTKVNYVVQEAIVAIKDI-YESMISTLCENLETLDEPAAKASMVWIVGEYVDDELLETFLETFHDEPSIVQLQLLTATVKL---------FLKKPAHTQDLVTKVLKMATEETYNPDLRIYWRMLARNPEAAKKVV......... 543
5 -19.300IDP06032 beta-adaptin-like protein, putative [Toxoplasma gondii ME49] EEB01577 [Toxoplasma gondii ME49]  ali follow..  12  1MAAASPSAPPPPPPTHHVVVPRPPAGPQFFVDQKRGELYELRQVLRSLPTERDVTKRDALKKLLFADVVMLASTADLVQKKMIYQYLTNYADTNAINTFQKDCNDEDPRLRGLALRSLCSLRLSCMLEYIEKGASDPSPYVRRAAVMGMLKV--DEIRQRLHEALFDDDPQVTINAICALNELEAETGATHFLNRIKRFSEWGVCVILNLVASYQPETVMNILDDKLKSSSAAVVLGCANCFLELTRCRLKPPLLTLATTGYPEIAHTILRHILLI--GEDAVEIFACRYTDPSYLKATKLQTLAAIATENNCIREYVCDADADIARQSLAALGVIACRIPSVVTLLLSFVEMELADFLASAAFVILRDILRKYTKMISRLVEAIRIYALRLSDGEGVAAVVWMLGEFSKPYILEEIVDRFDEEPPVVRMELLTAATKT-QPILGKLLEKAVNDTSNPDIHDKALFRFLKTSLQDARRILST.................................................................................... 579
6 -17.900IDP06029 adaptin N terminal region domain-containing protein [Toxoplasma gondii ME49] EEB01203 [Toxoplasma gondii ME49]  ali follow..  11  1........................MSLSPLMASTGPLLDRASAGMRALINIVSKSECQYFEEFNAAQVKKELQDASVESKVTAMKRLLAA--SALLPEVVKAIAVPDLELKRLVYLFLIQYAEGNSINSFQKDLTDRNQVVRAAALKALASIRLLEVVQLL---------------------------VISLKRAAADCSPFVRRTAAQCVVKVFAEELKSIVLTLLADVEVSVVGAALIAFRELCLRHSYRRLQKCLLQLEPFTQVVAVDIFMRY-SPERTRARSGDKSNANAAGLASVTIDKLTADSPGSNLPLLLHSESSAVVVAATAALFSLLPSATAAVHPLLRCMHTSAPDLQEPLLHTIAVLGSAAPVRSFFLRFSDSP---------TVKQAKLKVLRSLLVSASSEVRTYIHWPGDQALLSSSFRLLTFLAQAASMQTFVQLLDAPSAALAAEAVLALQTLLQRQLEQQRESSARGGQLGHLLLQLVSQFPRVHAPPARASVVWIVGQYQREVGWVAADFL---------RQLVPKFKAEAEEVKLQILLLALKV.. 673
7 -16.400IDP04465 hypothetical protein [Yersinia pestis CO92] YPO1994 [Yersinia pestis CO92]  ali follow..  9  58..IFSQIITELENPYQFQLENDIQAPSFILYSNERITIRLVMWLPLQGKLDRTPYSYEEAHDHNFDFWTVNFFGGGYRTRLYDYKVSGVNNEVVELNCYGDKILSPNTVMFYFRSKDVHTQYPPDELSVSLNLIVRPIKS-KHQYEFQIDSDALEGKIEARIKKGRYERYAFQNVLYNGLLSLENEKSRQLVHKVLCNHREEIRLIAYEALLKHAQKKGNVISEQAFKDQSLYIKNKISHSIGSMPCMSPKPR......................................................................................................................................................................................................................................................................................................................... 316
8 -15.900IDP92581 splicing factor 3a protein, putative [Toxoplasma gondii ME49] TGME49_021940 [Toxoplasma gondii ME49]  ali follow..  10  1MAPSIRGVSLFIQDVRNAPSREQARVLQELSKIRQAHPKKPLTGYEKKKCLTKLLYIHLLGDIGHAEAISLLSSPHYSERSAAFLFCSLLLVDSCCSSIKKELSLQHEDFAALALDCASYISDPDAAAELANPSSSASPLIRQKAYSCMLVFLRPSLLPCGQALLFEQDLSCLLSLVNLIFHAVLQTSQLSAINILARPAPWLAVRLLQLLQCFQEVLSDEPSRREDKRRDREEDSREDEAVVKQQREEIVKTIFTQVATANEEERQSSSGKGDRFSRKKGLGAHAVSPSVIQHAVLYEAISLSTHLQADAALLCSFVEEGDSNFRYKSLSLVAAMAADPKGAVPAILRLLEEEDVSLRRQAISLLFALSGPDNWSEIVLALLE------LHRDAETLPNISAHIAVLVET-LVDVAFQMLQRAPQHSLQTNETETNSQGGKRIPRRSVDQTSSCKD-KMRFLTNLFSGNFPPFTFIPLNDEAPAASCCPLLPLLLFALVKLAHAPVLQVLQELHDSRDLELQTRAVEALLELPDRQFVAQTLALL.................... 668
9 -15.700IDP92606 gamma-adaptin, putative [Toxoplasma gondii ME49] TGME49_113670 [Toxoplasma gondii ME49]  ali follow..  9  2..................................SCKLREFIRNIRAAKTAADERAV----SKECAEIRTAFKEGDGRYRHRNVSMLGYPTQFAQLECL-KLLASPRFAEKRVGYLGLSCLLDEQATNSIKNDLQHPNQYVNGLALTALGNIGTGEMCGAI---------------------------MTQVEDLLRCSNPFIRKKAALCGVRV--EKLLACLPALLADRNHGVLISACALITALAERDHIPTLVKSLKATDPLLQCRLLRVLALLAKGDASDVLAHVATNTEGAKNVECVRTIMTIEDDPGLLGRFLSSRELNVKYVALGTLQQVVRVDSKAVMILLDCLKDQDLSLRRRAVEVLFCLITDDNVRGLVKELLN----LLMLNDAEFKQFVVNKIAVAASR-QIDTLLKLMTLGGDAVDDAITYSFVDL-HSYVVHKCYFSFQHSLNAALWQAGVYCVGEFGDEKGHLLSPNGGGSMTEDTLAITPRQVADL--ISVADQLSSFPKAKQGVLTQTLLTAAAKLRLPSQRERLVGLLKNVEVQQRSSEYMGLLEWDE 592
10 -15.600IDP92584 adaptin N terminal region domain-containing protein [Toxoplasma gondii ME49] TGME49_044290 [Toxoplasma gondii ME49]  ali follow..  10  9....SKEFFHLIKAIGESKQEEDRIVANEIATLKVKLNEPNISQHKMQELLIRSLYVELLGH-HFHAVKMTNQTNNIKAKRLGYLACNLFLSEDLINTIQKDLASPNILNVQSALHCVARLLTPEMLPALLSLLQHSHAAVRRKAVMAVHKVLKEREQERRAKLAQQKGSRASSVDEDFESEV--EGLREKMRRALCDSDPSVMAVSLHVIHRLAAKNLVSSLVSILKQPAPWIQIKILSLLSTLASEEVYELLQEVMRRADAAGVNVAYAVI------ECVRTIAAL--YPYPKLLDIAGCSISR----------FISAENNNLRYVGVTGLAAVVQVSPAYATVVVDCLEDSDDTLKRKTLDLLVKITNPVNVAVVVEKLLG----SRATVDAHLRANLIQKIIMLAER-FLETILCVLEVSGPSLPLASGGNAGARRCLSGGSTAGNLAAGLCYSTAYSLLQLVAEGPTDDEESDKAFREY----------------------AVNDMVALLERKKLVIPDVLMQVLGEFGCESVIDLLASCLERSDPTTQAWILTAILKL.. 591
11 -11.100IDP06034 adaptin, putative [Toxoplasma gondii ME49] EEA97063 [Toxoplasma gondii ME49]  ali follow..  11  1MFQSRTSLPSLIRGLGNDDEFLSASLQQIKEELVSASSPASQSL-RAPSASVRSTALQMLGGFATFSVVEAMSVQSFTLKRPAYFACALA--ASPLSATSLRARENDACAREEAQDGRQLSGSGAEGRNLADEKQKQQQALSLLTTNLFKK-------------FNSKETHETSLALSTLAVMSTPEIAAALLLLLASSRSILRKKAAVCASRF-PSSFPKLRQQLMSEEETPVVTSLCSALLQLIAERLVPPLFHLLCAFEPRLPLKLLRPLRTLLEQSRAKSVEVEILRLSLLHFPFEEAAAKARRTAAAGALLANSEVAGEEPPREDGGECELDAFLRSCLRRIHALLTSADRNLRCVGVDILAR-------------LFAEKRDMAADVAACIPEF--------------KFVLQAAEECDPTIRSRGIDLLTKTATAESFTQI----------------------------AEQLVAAAGALEAQRLPGQTRSEKETGDPRSALAVAASPASLRASFLLPVLRMGAENHYALVLALLASIAVDGGESSVDSYRGRPAGAG. 559
12 -9.360IDP93831 cellulose synthase subunit BcsC [Yersinia enterocolitica subsp. enterocolitica 8081] YP_001008212 [Yersinia enterocolitica subsp. enterocolitica 8081]  ali follow..  10  49....ELVKQSLYRLNMMDPNNPDVIAAGIRQALRQGNLAEAQKQLDKLQQLAPDSE-----VYRRAKLMLAMTKPEVRQQLQEARLLATAGRAEAKVKYDQLLQTLDLAVEYWRLVARLPGQEVLATQKLASLDQQGNVALRMALARMYFSQQKAQGYALLEKVATDPNSDAADLWMDTIKTMTSPQSVTALTHFLDVFSTGPQADIAR--------KELANQQTMLADPTYQARLSGLAKVDSGSGVAAIPALKQALAPNDPEILGALGLAYARAGDRAQALRLFEQAQKSDKD-EGDKALKAGNTALAQQKYQQARQGSDSYALIGLGDVAVARH-DDKTAEQHYQQALRLDPANS--SAVRGLANIYQRESPQKALNYLNNLPRSQQAKMRDTLNSLQLDMLKQQAEHQAAEKYRQAQKPNDVWITYRLAQALAQDGHAQADAEFHQLASKPGDPEQVYAYALYLSSTERDSQALAHLATLPAAQWNDNIRELDQRLKLDQVLTLARQLRENGDANTQIDLTLADWALERGDSEALAGYQRIRARQNPDARLGEIEAYIAEGR 656
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.