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Query: IDP90690 gene: gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj1196c [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MMRIAVIGAGKWGSALHLALKENHNCFISSLHQRDLEDFVSIKEALECEYLVFALSSQGMRAWLKENFINKGQKILIASKGIEDQSCQFLDEIFLDFVPKENFCVLSGPSFAAEVMQKLPTALMISGINQELCKKFASFFPDFIKTYIDNDVRGAEICGAYKNVLAIASGISDGLKLGNNARAALISRGLIEMHRFGKFFGTKEETFLGLSGAGDLFLTATSVLSRNYRVGLKLAQNQKLDSILAELNEVAEGVKTAYAIEKLAKMKGIYTPIVNEVVAIFKGKSVQEATQNLLKQNDLast
1 -106.000IDP90690 gene: gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj1196c [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali  100  1MMRIAVIGAGKWGSALHLALKENHNCFISSLHQRDLEDFVSIKEALECEYLVFALSSQGMRAWLKENFINKGQKILIASKGIEDQSCQFLDEIFLDFVPKENFCVLSGPSFAAEVMQKLPTALMISGINQELCKKFASFFPDFIKTYIDNDVRGAEICGAYKNVLAIASGISDGLKLGNNARAALISRGLIEMHRFGKFFGTKEETFLGLSGAGDLFLTATSVLSRNYRVGLKLAQNQKLDSILAELNEVAEGVKTAYAIEKLAKMKGIYTPIVNEVVAIFKGKSVQEATQNLLKQND 298
2 -89.700IDP01730 gene: gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [Francisella tularensis subsp. tularensis SCHU S4] FTT0871 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  36  2QKNILVLGAGAWGTALALQLAYGHNVRINSWKPSRLKAIQDWQANIEFDSILVATPSSGFKNTILELCILPQQNIISATKGFCHDSYALLSEIAEDILPTTKFALLTGPSFAKELANQLPTAVVVASKDINYARYVQELFNENFRCYTTTDIIGAQVGGAVKNVLAITAGIAAGMEFGVNAHAALITRGLAEIKKLGLKLGANSETFIGLSCLGDLLLTCSDNQSRNRRFGLYLGQGMTIQQALKEVNNVVEGYFTAKAVYNLAKKHNVEMPLVFATYRILEAADPRDIVKELMTRQ. 327
3 -88.300IDP02668 gene: gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [Bacillus anthracis str. `Ames Ancestor`] GBAA1526 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  34  1MTKITVVGAGSWGTALAMVLADGHDVRIWGNRPSTIVAYSSLEEALDVNVVLIVVPTKAYREVLQDMYVAGPTTWIHASKGIEPGTSKRISEVIEEEIPEKDVVVLSGPSHAEEVGLRQATTVTSAAKRMEAAEEVQDLFNSYFRVYTNPDIVGVELGGALKNIIALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGLTGMGDLIVTCTSVHSRNWRAGNMLGKGHSLEEVLESMGMVVEGVRTTKAAHELAEKMEVEMPITAALYDVLNGNNVKDAVGSLMGRV. 328
4 -87.500IDP01976 gene: gpsA; glycerol-3-phosphate dehydrogenase (NAD+) [Coxiella burnetii RSA 493] CBU_1518 [Coxiella burnetii RSA 493]  ali follow..  35  6.HPIAILGAGSWGTALALVLARGQKVRLWSYEPETLKAYCDLKASLGVTDILIVVPSFAFHEVITRMLIDAKTRIAWGTKGLAKGS-RLLHEVVATELGQVPMAVISGPSLATEVAANLPTAVSLASNNSQFSKDLIERLGQRFRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGRLVSVFGGKQETLTGLAGLGDLVLTCTDNQSRNRRFGLALGEGVDKKEAQQAIGQAIEGLYNTDQVHALAQKHAIEMPLTFQVHRILEDLDPQQAVQELLERS. 328
5 -73.100IDP92082 glycerol-3-phosphate dehydrogenase, putative [Toxoplasma gondii ME49] TGME49_107570 [Toxoplasma gondii ME49]  ali follow..  23  23.LRVAVIGSGNWGSVIGKICAQNDQVRMWVFEPDNLVAVPDVVEACGADLLVFVMPHQFVAKVCDQLAVPSHARAISLLKGLYVEGGQLFSDTIRSKLNIVECAALSGANVANDVAREEFAEATIGHSPDETALIWQQLFKPYFKVNTLPDVAGVQLCGAVKNVVALAAGFCDGLGLGTNTKSAIIRLGVEEMKQFGMIFFDNAETFFDSAGYADVITTVFGGRNARCAAEFVRQKGSKTWDQIEAEGQKLQGTLTAREVFEVISSHEVDFPLFTVTYDIFKGRDPADLVRVFETRE. 371
6 -70.100IDP92023 glycerol-3-phosphate dehydrogenase, putative [Toxoplasma gondii ME49] TGME49_010260 [Toxoplasma gondii ME49]  ali follow..  24  17.LKVSVVGSGNWGSVIAKIVALNNEVRMWVYEPENLVALPDVVEACDSDLLIFIMPHQFATKVCEQLAVPGHARAITLLKGLENGKPTLFSDIFKTKLDIVDCCVLSGANVANDVAREEFAEATIGYSPEETALIWQQLFTPYFKVNALPDVAGVQVCGAVKNVIAIAAGFCDGLGLGTNAKTAIIRLGVEEMKQFAMIFFDMAETFFDSAGYADVITTVFGGRNARCAAEFRRGGKATWDQIEADLGQKLQGTLTTKEVYEVIAAYEVEFPLFSVTYEIFNGRDPNDLIRVFKTSE. 365
7 -15.500IDP04504 2-dehydropantoate 2-reductase [Vibrio cholerae O1 biovar eltor str. N16961] VC2307 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  11  1.MNIVVLGPGAVGSLWALHLHSGHQVALWSRQAQPTITNQNLDTLIHADLLLITVKAWQVEAALQPLLLNRETILLFMHNGMGA------VEAISESLTHFPVALKATLNQVSHTGFGQTQVGPFNALGARCDFIADVFNHALAPVTWNPEIQQA-AVNCAINPLTAIHQCANG-ALVAPEFTPIITAILDEVTAVMQAEAIS----GEAEALRDGVYQVIQATAANLS--------SMHQDVFHRRPTEIDFIT---YVVRKGEQHGIATPVNSALYQQIKTLE............. 290
8 -12.000IDP06064 3-hydroxyacid dehydrogenase [Helicobacter pylori J99] NP_223303 [Helicobacter pylori J99]  ali follow..  13  1.MKIGWIGLGAMGTPMARLRDAGLEVSVYNRTESKAAYTSPIDLAAKVDLVFTMLSDK---AAIDAVLAPKFWEQMSKKIVVNMSTIALESLSLEKIAQKHQATYLEAPVSGSVGAAKAGALLILAAGDEEVISKLKPVL----------AHLG-------SQTFYLGVGQGTGAKLSINSLLAQMGVAYSEALLLAKRLGVDAESFLQIIGQSGMNSPLFQAKK-GMWLQDNYPAAFSLKLMAKDIRLAKN-----------EAGEAMKLPFLFQAEELYS................ 261
9 -11.200IDP90757 gene: ilvC; ketol-acid reductoisomerase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0632 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  10  19.KKVAIIGFGSQGHAHAMNLRDNGNVTIGLREGSVFEVVSVSEASKIADVIMILAPDEIQADIFNVEIKPSEGKAIAFAHGFNIHYGQIVVPKGVDVIMIAPKAPGHTVRNEFTLGGGTPCLIAIHQDESKNAKNLALSYASAIGGGRTGIIETTFKAETETDLFGEQAVLCGGLALIQAGFETLVEAGYEPEMAYFECLHEMKLIVDLIYQGG--IADMRYSISNTAEYGDYITGPKIIEETKKAMKGVLKDIQNGVFAKDFILERRAGFARMHAERKNMNDSLIEKTGRNLRAMMP 327
10 -9.380IDP01494 UDP-glucose 6-dehydrogenase VCA0780 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  11  1.MKIAIAGTGYVGLSNGILLAQHNEVVFLQHQPLNFRATCDKRDAYDAQFVVIATPTRTVEAVIDDVLAINPQAIMVIKSTVPVGYTKRIKQRLCC------NNLIFSPEFLRE----YPSRIIVGEKSERGQAFATLLAQGAKKMDIPILLTHSTEAEAVK--------------LFSNTYLAMRVSFFNELDTYAETHGLDTKQIIEGVGLDPRI-------NHYNNPSFGYG-GYCLPKDTRQLLRNFEDVPNNLIRAIVDANTTRKDHIAFSILNR.................. 294
11 -9.100IDP02330 gene: ilvC-1; ketol-acid reductoisomerase [Bacillus anthracis str. `Ames Ancestor`] GBAA1419 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  10  18.KKVAIIGYGSQGHAHAQNLRDNGDVVVGLRKGDGFSVYTVAEAAKQADVVMILLPDELQPEVYEEEIAPQAGNSLVFAHGFNVHFDQVKPPVNVDVFLVAPKG--PGHLVRRTFSEGGAVPALFAVYQDATGVATEKALS-----------YADGIGATRAGVLETTFKEETETDL-QAVLCGGVTALVKAGFETLVDAGYQPELAYELKLIVDLMYEMRYSVSDTAQWGDFVSGPRVVEDTKKAMGTVLAEIQDGTFARGWIAEHKAGKPNFYATNEKENEHEIEVVGRKLRGMMP 325
12 -9.080IDP02524 gene: ilvC-2; ketol-acid reductoisomerase [Bacillus anthracis str. `Ames Ancestor`] GBAA1852 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  10  17.KTVAVIGYGSQGHAQAQNLRDSGEVVVGVRPGDGFEVMSVSEAVRTAQVVQMLLPDEQQAHVYKAEVEEREGQMLLFSHGFNIHFGQINPPSYVDVAMVAPKSPGHLVRRVFQEGNGVPALVAVHQDATGTALHVAGVIETTFQEETETDLFGEQLCGGVTALVKAGFETLTEGGYRPEIAYFECLHELKLIVDLMYEGG---------------LTNMRHSISDTAEFGDYVTGSRIVTDETKKMKRVLTEIQQGEFAKKWILENQAGRPTYNAMKKAEQNHQLEKVGEELREMMS 324
13 -9.060IDP02492 gene: proC; pyrroline-5-carboxylate reductase [Francisella tularensis subsp. tularensis SCHU S4] FTT1559c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  11  1.MKICFIGGGNMAAAMIAGMTSHGDIIVFDRNEHKCLSTSLLNTIKLADVLILAIKPQNMFELIKNITVTSTQVIVTVAAGIQTSA-------YEELFNKEISFARTIPNTPSSLGYGATGIFFNKVIAADKKDLVIDIMQTMGVVTVVEDEKEIDIVAAIASYFQFMEHMVEAQGLDKKQAEKLVVQTCLGAAQMALNTNENMSTYEALNIFEQVDKAIQANIARAQQLAIEFTK.............................................................. 270
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;