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Query: IDP90757 gene: ilvC; ketol-acid reductoisomerase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0632 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MAITVYYDKDCDLNLIKSKKVAIIGFGSQGHAHAMNLRDNGVNVTIGLREGSVSAVKAKNAGFEVVSVSEASKIADVIMILAPDEIQADIFNVEIKPNLSEGKAIAFAHGFNIHYGQIVVPKGVDVIMIAPKAPGHTVRNEFTLGGGTPCLIAIHQDESKNAKNLALSYASAIGGGRTGIIETTFKAETETDLFGEQAVLCGGLSALIQAGFETLVEAGYEPEMAYFECLHEMKLIVDLIYQGGIADMRYSISNTAEYGDYITGPKIITEETKKAMKGVLKDIQNGVFAKDFILERRAGFARMHAERKNMNDSLIEKTGRNLRAMMPWISAKKLVDKDKNLast
1 -98.600IDP90757 gene: ilvC; ketol-acid reductoisomerase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0632 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali  100  1MAITVYYDKDCDLNLIKSKKVAIIGFGSQGHAHAMNLRDNGVNVTIGLREGSVSAVKAKNAGFEVVSVSEASKIADVIMILAPDEIQADIFNVEIKPNLSEGKAIAFAHGFNIHYGQIVVPKGVDVIMIAPKAPGHTVRNEFTLGGGTPCLIAIHQDESKNAKNLALSYASAIGGGRTGIIETTFKAETETDLFGEQAVLCGGLSALIQAGFETLVEAGYEPEMAYFECLHEMKLIVDLIYQGGIADMRYSISNTAEYGDYITGPKIITEETKKAMKGVLKDIQNGVFAKDFILERRAGFARMHAERKNMNDSLIEKTGRNLRAMMPWISAKKLVDKDKN 340
2 -79.500IDP02524 gene: ilvC-2; ketol-acid reductoisomerase [Bacillus anthracis str. `Ames Ancestor`] GBAA1852 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  56  1..MKTYYEQDANVGLLQGKTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRPGKSFEV-AKADGFEVMSVSEAVRTAQVVQMLLPDEQQAHVYKAEVEENLREGQMLLFSHGFNIHFGQINPPSYVDVAMVAPKSPGHLVRRVFQEGNGVPALVAVHQDATGTALHVALAYAKGVGCTRAGVIETTFQEETETDLFGEQAVLCGGVTALVKAGFETLTEGGYRPEIAYFECLHELKLIVDLMYEGGLTNMRHSISDTAEFGDYVTGSRIVTDETKKEMKRVLTEIQQGEFAKKWILENQAGRPTYNAMKKAEQNHQLEKVGEELREMMSWIHAPKELVKK.. 335
3 -77.400IDP02330 gene: ilvC-1; ketol-acid reductoisomerase [Bacillus anthracis str. `Ames Ancestor`] GBAA1419 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  56  1M-AKVYYEKDVTVNVLKEKKVAIIGYGSQGHAHAQNLRDNGFDVVVGLRKGKSWDK-AKEDGFSVYTVAEAAKQADVVMILLPDELQPEVYEEEIAPNLQAGNSLVFAHGFNVHFDQVKPPVNVDVFLVAPKGPGHLVRRTFSEGGAVPALFAVYQDATGVATEKALSYADGIGATRAGVLETTFKEETETDLFGEQAVLCGGVTALVKAGFETLVDAGYQPELAYFECLHELKLIVDLMYEGGLENMRYSVSDTAQWGDFVSGPRVVTEDTKKAMGTVLAEIQDGTFARGWIAEHKAGKPNFYATNEKENEHEIEVVGRKLRGMMPFVQPRVKAGVK.. 336
4 -59.300IDP90565 ketol-acid reductoisomerase [Vibrio cholerae O1 biovar eltor str. N16961] VC0162 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  30  23MAREEF---ATEADYLKGKKVVIVGCGAQGLNQGLNMRDSGLDVSYALREQRQSFKNAKNNGFNVGSYEQLIPTADLVINLTPDKQHTSVV-NAVMPLMKQGAALGYSHGFNIVEEGMQIRKDITVVMVAPKCPGTEVREEYKRGFGVPTLIAVHNDPQGEGWEIAKAWAAATGGHRAGCLASSFVAEVKSDYFDNGILMIAMVRAGVELAFEAMTASGIIDESAYYESLHELPLIANTVARKRLYEMNVVISDTAEYGNYLFANVAVPLLREKFMPKVGTDVIGKGLGVV---SNQVDNATLIEVNSIIRNHPVEYIGEELRGYMKDMKRIAVGD.... 494
5 -31.900IDP06064 3-hydroxyacid dehydrogenase [Helicobacter pylori J99] NP_223303 [Helicobacter pylori J99]  ali follow..  15  1..................MKIGWIGLGAMGTPMATRLRDAGLEVSVYNRTESKAAPLKEKGVAVYTSPIDLAAKVDLVFTMLSDKAAIDAVLAPKFWEQMSKKIVVNMSTIAPLESLSLEKIAQKHQATYLEAPVSGSVGAAKAGA-LLILAAGDEEVISKLKPVLAHLGSQTFYLGKVGQGTGAK--------LSINSLLAQMGVAYSEALLLAKRLGVDAESFLQII............................................................................................................... 202
6 -22.200IDP06299 6-phosphogluconate dehydrogenase [Streptococcus pneumoniae TIGR4] NP_344902 [Streptococcus pneumoniae TIGR4]  ali follow..  9  1...............MTKANFGVVGMAVMGRNLALNIESRGYTVAIYNRSKEKTEDVPEKNFVPSYDVESFVNSIEKIMLMVQAGPGTDATIQALLPHLDKGDILIDGGNTFYKDTIRRNEELANSGINFIGTGVSGGEKGALEGPSI--MPGGQKEAYELVADVLEEISAKAPEDGKPCVTYIGPDGAGHYVKMVHNGIEYGDMQLIAESYDLMQHLLGLSAEDMAEIFTEWN.......................................................................................................... 224
7 -20.900IDP02226 gene: yqjI; 6-phosphogluconate dehydrogenase [Bacillus anthracis str. `Ames Ancestor`] GBAA0164 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  11  1...............MENLQIGVVGVGVMGKSLALNFESKGYSVALYDISKEKVDETIEENRGKTHIVEEFVNSLESILLMVNAGEITDKAIDSLVPHLDKGDILIDGGNTYFVDTIRRNKRLAEEGINFIGAGVSGGEEGALKGPSI--MPGGQKDAYEKVKDMLENISAKVNNEPCCSYIGPNGAGHYVKM--VHNGIEYGDMQLICEAYFFLKQTLDLTAEEFHEIFAEWN.......................................................................................................... 222
8 -16.600IDP02179 gene: proC; pyrroline-5-carboxylate reductase [Coxiella burnetii RSA 493] CBU_2090 [Coxiella burnetii RSA 493]  ali follow..  15  1...............MNTSNITFIGGGNMARNIVVGLIANGYRICVTNRSLDKLDFFKEKCGVHTTDNRQGALNADVVVLAVKPHQIKMVCEE-LKDILSETKILVISLAVGVTTPLIEKGKASRIVRAMPNTPSS--------RAGATGLFA--ETVDKDQKNLAESIMRAVGLV------IWVSSEDQIEKIAALS---AYIFLIMEALQEAAEQLGLTKETAELLTEQTVLGAARMALETEQSVVQLRQFVTSPGGTTEQAIKVLESG----LRELFIKALTAAVNRA................................................. 265
9 -16.600IDP02492 gene: proC; pyrroline-5-carboxylate reductase [Francisella tularensis subsp. tularensis SCHU S4] FTT1559c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  14  1..................MKICFIGGGNMAAAMIAGMTSHGYDIIVFDRNEHKCLNLIKKYNINTSSLLNTIKLADVLILAIKPQNMFELIKNIRDTVTSTQVIVTVAAGIQTSAYEELFNKEISFARTIPNTPSS--------GYGATGIFF--KVIAADKKDLVIDIMQTMGVV------TVVEDEKEIDIVAAIA---AYYFQFMEHMVEAAIKQGLDKKQAEKLVVQTCLGAAQMALNTNENMSELRKNVTSKKGITYEALNIFEQF----LGGIVDKAIQANIARA................................................. 261
10 -16.500IDP00140 pyrroline-5-carboxylate reductase, putative BA_0197 [Bacillus anthracis str. Ames]  ali follow..  14  1..............MLTKHRILFIGAGRMAEAIFSGLLKTSKEIIVSNRSNVEKLDQLRAR--TTTDWKQHVTSVDTIVLAMPPSAHEELLAE-LSPLLSNQLVVTVAAGISPSYLEERLPGGTPVAWIMPNTAAE--------GKSISLYTM--QFVNETHQETLQLLLRGIGTS------QLCTEEEVHQLTAVTGSAPAFLYYFAESLIEATKSYGVDEATAKHLVIQMISGSASMLEQ.................................................................................................. 219
11 -16.200IDP95479 S-adenosylhomocysteinase Q5CPH1 [Cryptosporidium parvum]  ali follow..  21  265..............MLAGKKIVVLGYGEVGKGCAQGLSGVGARVIVTEIDPICALQ-ASMEGYQVSVLEDVVSEADIFITATGNK---DVITVEHMRKMKENAYIANIGHFDDEID................................................................................................................................................................................................................................ 362
12 -14.400IDP92093 adenosylhomocysteinase, putative [Toxoplasma gondii ME49] TGME49_025050 [Toxoplasma gondii ME49]  ali follow..  18  252...............LGGKRVVICGFGDVGKGCAAAMKGAGARVVVTEVDPICALQ-AAMEGYSVSTLESQLATADIFISATGNK---DIITARHMSQMKNNAIVGNIGHFDNEVD................................................................................................................................................................................................................................ 348
13 -14.200IDP01730 gene: gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [Francisella tularensis subsp. tularensis SCHU S4] FTT0871 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  13  3..................KNILVLGAGAWGTALALQLAYRGHNVRINSWKAEHNEQMLKDN-KAIQDWQANIIEFDSILVATPSSGFKNTILELKECILPQQNIISATKGFCHDSYALLSEIAEDILPTTKFALLTGPSFAKELANQLPTAVVVASKDINYARYVQELFSNE-----------NFRCYTTTDIIGAQ--VGGAVKNVLAITAGIAAGMEFGVNAHAALITRGLAEIKKLGLKLGLLTCSDNQSRNRRFGLYLGQGMTI-QQALKEVNNVVEGYFTAKAVYNLAKKHNVEMPLVFATYRILYEAA--DPRDIVKELMTRQLKNE....... 331
14 -14.000IDP01976 gene: gpsA; glycerol-3-phosphate dehydrogenase (NAD+) [Coxiella burnetii RSA 493] CBU_1518 [Coxiella burnetii RSA 493]  ali follow..  12  6..................HPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEG-KAYCDLKASLEGVTDILIVVPSFAFHEVITR-MKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQVPMAVISGPSLATEVAANLPTAVSLASNNSQFSKDLIERLHGQ-----------RFRVYKNDDMIGVE--LCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGRLVSVFGVLTCTDNQSRNRRFGLALGEGVDK-KEAQQAIGQAIEGLYNTDQVHALAQKHAIEMPLTFQVHRILHEDL--DPQQAVQELLERSPKAE....... 332
15 -13.800IDP05722 gene: tyrA; prephenate dehydrogenase [Bacillus anthracis str. Ames] BA_2954 [Bacillus anthracis str. Ames]  ali follow..  13  15..................KKVVLIGTGLIGGSLALAIKKDHDVTITGYDIFQEQVERAKELHVVAVDLQHACEEAHLIVFASPVEETKKLLHKLASFHLREDVIVTDVGSTKGSIMNEAEALFSKEISFIGGHPMAGSHKTGVESENAFYILTPMHHVPNEHVEELKDWLKGTGS-----------LVLNTEEHDYVTGIVSHFPHLIAAGLVKQVEKHAGDNPLIHQLAA-----------GGFKDITRIASSSPKM-------------WSDIV------KQNREHLMVLLKEWISEMEDLYDTVSSGDAGEIQNYFADAKEYRDSLPVRK....... 299
16 -13.400IDP91227 gene: tyrA; T-protein [Escherichia coli CFT073] NT04EC3201 [Escherichia coli CFT073]  ali follow..  9  100..................PVVIVGGGGQMGRLFEKMLTLSGYQVRILEQHDWD-------------RAADIVSDAGMVIVSVPIHVTEQVIGK--LPPLPKDCILVDLA--SVKNGPLQAMLAAHDGPVLGLHPMFGPDSGSLAKQVVVWCDGRKPEAYQWFLEQIQVWGARL-------------HRISAVEHDQNMAFIQALRHFATFAYLHLAEENVQLEQLLALSSPIYRLELAMVGRL-----------FAQDPQLYADIIMSSERNLALIKRYYKRFGE-----------------AIELLEQGDKQAFIDSFRKVEHWFGDYAQRFQSESRV. 363
17 -13.300IDP02668 gene: gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [Bacillus anthracis str. `Ames Ancestor`] GBAA1526 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  15  2..................TKITVVGAGSWGTALAMVLADNGHDVRIWGNRSELMDEINTKH-VAYSSLEEALVDVNVVLIVVPTKAYREVLQDMKKYVAGPTTWIHASKGIEPGTSKRISEEEIPEDLIKDVVVLSGPSHAEEVGLRQATTVTSAAKRMEAAEEVQDLFMNS-----------YFRVYTNPDIVGVE--LGGALKNIIALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGIVTCTSVHSRNWRAGNMLGKGHSL-EEVLESMGMVVEGVRTTKAAHELAEKMEVEMPITAALYDVLFNGN--NVKDAVGSLMGRVRKHEV...... 333
18 -13.200IDP00461 gene: tyrA; bifunctional chorismate mutase/prephenate dehydrogenase YPO3285 [Yersinia pestis CO92]  ali follow..  10  100..................PVVIIGGQGQMGRLFSRMLNLSGYQVRTLEQEDWS-------------QAESILADAGMVIVSVPIHITEEVINR--LPKLPADCILLDLA--SVKNKPLQAMLAAHEGPVLGLHPMFGPDVGSLAKQVVVYCDGRDPQAYQWLLEQLQVWGARL-------------HRISAVEHDQNMAFIQALRHFATFAYLHLAEENVQLEQLLALSSPIYRLELAMVGRL-----------FAQDPQLYADIIMSSEDNLALIKRYYKRFGE-----------------ALTLLEHHDKQAFVQSFEKVEHWFGDYAERFLVESRS. 363
19 -12.600IDP04504 2-dehydropantoate 2-reductase [Vibrio cholerae O1 biovar eltor str. N16961] VC2307 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  13  1..................MNIVVLGPGAVGSLWALHLHSAGHQVALWSRQAQPTITLQLDE--FRNQNLDTLIHADLLLITVKAWQVEAALQPLLPHLNRETILLFMHNGMG-AISESLTHFPVLFATTTHGALKATLNQVSHTGFG-QTQVGPFNALGARCDFIADVFNHA-------LAPVTWNPEIQQALWR-----------------KLAVNCAINPLTAIHQC---------------------------------ANGALVAPEFTPIITAILDEVTAVMQAEAISGEAEALRDGVYQVIQATAANLSSMHQDVFHRRPTEIDTGYVVRKGEQ 271
20 -12.600IDP02277 glycerate dehydrogenase [Bacillus anthracis str. `Ames Ancestor`] GBAA1434 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  20  142...............VHGKTIGIIGLGEIGKAVAKRAKAFGMNILYTGPN--RKPEAESELEATYVTLEELLQTADFITINCANPKLHHMIDEEQFKMMKKTAYIVNASRGPI................................................................................................................................................................................................................................... 238
21 -12.500IDP00951 gene: ycdW; putative oxidoreductase STM1135 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  19  127........KPLPEYTREEFSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESYVGRE--ELRAFLNQTRVLINLLPTAQTVGIINSELLDQLPDGAYVLNLARGVH................................................................................................................................................................................................................................... 230
22 -12.200IDP91791 gene: vanH; vancomycin resistance protein [Enterococcus faecium] AAA24789 [Enterococcus faecium]  ali follow..  19  144...............LSDMTVGVVGTGQIGKAVIERLRGFGCKVLAYSRSRSI--------EVNYVPFDELLQNSDIVTLHVPNTDTHYIISHEQIQRMKQGAFLINTGRGPL................................................................................................................................................................................................................................... 234
23 -12.000IDP06313 hypothetical protein SP_1627 [Streptococcus pneumoniae TIGR4] NP_346067 [Streptococcus pneumoniae TIGR4]  ali follow..  13  1..................MKLAVIAAGQAGKAIVEEAVKRGHEVTAIVRSENKSQAESIIKKDLFELTKDDLTGFDAVISAFGTLPLHSKSIELFNQLLAGTQTLVVGGAGSL................................................................................................................................................................................................................................... 103
24 -11.200IDP00460 gene: serA; D-3-phosphoglycerate dehydrogenase YPO0914 [Yersinia pestis CO92]  ali follow..  11  134AHRGEWNKLAVGSFEARGKKLGIIGYGHIGTQLGILAESIGMKVFFY----DIENKLSLGNAQQVRQLSDLLNMSDVVSLHVPNHTTKNMIGAEQLAQMKPGALLINASRGTV---------------VDIPALCDALSSNHLSGAAIDVFPEEPATNKDPFNSPLCEFDNVLLTPHIGGSTQEAQENIGDEV................................................................................................................................................... 308
25 -11.200IDP90690 gene: gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj1196c [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  10  2..................MRIAVIGAGKWGSALHLALKENH-NCFISSLHQRD---------LEDFVSIKEALECEYLVFALSSQGMRAWLKENFIN--KGQKILIASKGIEDQSCQFLDEIFLDFVPKENFCVLSGPSFAAEVMQKLPTALMISGINQELCKKFASFFPDFIKTYIDNDVRGAEICGAYKNVLAIASGISDGL-KLGNNARAALISRGLIEMHRFGKFFGTKEETFLGLSGAGFLTATSVLSRNYRVGLKLAQNQKL-DSILAELNEVAEGVKTAYAIEKLAKMKGIYTPIVNEVVAIFKGKSVQEATQNLLKQND............. 298
26 -11.200IDP90773 erythronate-4-phosphate dehydrogenase [Vibrio cholerae O1 biovar eltor str. N16961] VC2108 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  22  121...............VFDKTVGIIGAGQVGSYLAKCLSGIGMKVLLND-------KQAQGDEREFTELETLLKQADVITLHTPEWPTHHLIDAAILEQLRSDQILINAARGPV................................................................................................................................................................................................................................... 218
27 -11.100IDP91958 Trk family potassium uptake protein [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100004562 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  12  1...............MSDRTIGILGLGIFGSSVLAALAKQDMNIIAIDDHAERINQFEPVDITDEELLRSAIDTCDTVVVATGENLESSVLAVMHCKSL--GVPTVIAKVKSQTAKKVLEKIGADSVI.................................................................................................................................................................................................................... 119
28 -11.000IDP90820 gene: pdxB; erythronate-4-phosphate dehydrogenase [Salmonella typhimurium LT2] STM2370 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  15  114...............LRDRTIGIVGVGNVGSRLQTRLEALGIRTLLCD-------RAARGDEGDFRTLDELVQEADVLTFHTPPYKTLHLADETLIRRLKPGAILINACRGPV................................................................................................................................................................................................................................... 211
29 -10.900IDP04467 putative nucleotide sugar dehydrogenase [Yersinia pestis CO92] YPO2174 [Yersinia pestis CO92]  ali follow..  11  1..................MKVTVFGIGYVGLVQATVLAEVGHDVLCIDIDANKVADLKKEPGLASTDAQAGVAHGVIQFIAVGDLKYVLDVASTIGTYMDSPKVIIDKSTVPVGTADKVHQAILEQRGEKIDFSVVSNPEFLKEGAAVERIVIGIDTDDSGALELISELYEPFNRNHDRMLVMDIRSAELTKY--AANGMLATKISFMNEIANIAERLGADIEKVRQGIGSDSRIGYHFIFPKDIQALIRTAEDKGYKPQLLQAVEQINNQQKYKLTEFIKSHFNSQLAGKTFAAFKPNTDDMREAPSRVVMESLWEAGATIQAYDPEAMDET....... 365
30 -10.700IDP04474 gene: pdxB; putative D-isomer specific 2-hydroxyacid dehydrogenase [Yersinia pestis CO92] YPO2763 [Yersinia pestis CO92]  ali follow..  18  114...............LRDKTVGIIGVGNVGSRLNARLQALGVRTLLCD-------RADRGDNEAFWPLEKLVREADVLTFHTPAYQSLHMADDELLAALPDGRILINACRGAV................................................................................................................................................................................................................................... 211
31 -10.700IDP00666 TrkA potassium uptake family protein SACOL1096 [Staphylococcus aureus subsp. aureus COL]  ali follow..  16  2.................GKEYVVIGLGRFGGSIVRELNALDMDVMAIDHDENRVNEYSDIDTTDEAVMKSLIRNFDHVIVAIGENIQSSTLTTLILKEL--GVKKVTAKAQNDYHAKILNKIGADTVV.................................................................................................................................................................................................................... 118
32 -10.400IDP01104 potassium uptake protein, TrkA family BA_4191 [Bacillus anthracis str. Ames]  ali follow..  18  5.................EKEFAVIGLGRFGGSICRELAQLGMEVMAIDSDEDKINEFANIDSTDEMVLKSLIRNFDHVVVAIGDNLNSSILTTLILKEL--GVKNITVKAQNDYHEKVLSKIGADHIV.................................................................................................................................................................................................................... 121
33 -10.400IDP00425 gene: wecC; UDP-N-acetyl-D-mannosamine dehydrogenase YPO3863 [Yersinia pestis CO92]  ali follow..  12  1...............MSFETISVIGLGYIGLPTAAAFASRKKKVIGVDVNAHAVETIKIAVEGGYLQAVTKPQAADAFLIAVPDMIFVESAAKSIAPVLKKGDLVILESTSPVGATEQMAQWLAEAAGEAADINIAYCPERVLPGQVMVELIQNDRVIGGMTPKCSARASALYKIFLEGECVVTNSRTAEMCKLTENSFRDVNI-AFANELSLICDEQGINVWELIRLA............................................................................................................... 247
34 -10.400IDP05101 gene: hbd; 3-hydroxybutyryl-CoA dehydrogenase [Clostridium difficile 630] CD1058 [Peptoclostridium difficile 630]  ali follow..  15  1..................MKLAVIGSGTMGSGIVQTFASCGHDVCLKSRTQGEATKAEILSHVSSTTNYEDLKDMDLIIEASVEDMNIKKDVFKLLDELCKEDTILATNTSSLSITEIAS............................................................................................................................................................................................................................ 125
35 -10.400IDP91405 dehydrogenase [Vibrio vulnificus CMCP6] VV1_0801 [Vibrio vulnificus CMCP6]  ali follow..  13  2....................IWLIGSGLMSIDYAKVLDAQGCDYQVVGRGSDSAASFTEKTGKAVIGLAQHIANTEAAIVSVGVAQLYETTKQLIEAGVK................................................................................................................................................................................................................................................ 87
36 -10.200IDP01235 gene: wecC; UDP-N-acetyl-D-mannosamine dehydrogenase BA_5512 [Bacillus anthracis str. Ames]  ali follow..  13  1..................MKICTMGLGYIGLPTSAMFAKYGTEVVGVDIHQKVVDKLKEVVANGKFRASLTPEEADAFIISVPDLSYVLTATEKVLPFVKKGNVIIVESTIAPRSMDVKPLVEEAGFTVGEDIYLVHCPERVLPGQILHELVHNNRIVGGVTPACAEAGARVYGVFVEGEIIKTNAKTAEMSKLMENTFRDVNI-ALANELTKVCNSLDINVLDVIEMANKHPRV---NLHYPGPVDPYFIVAKAPELANIIKLSRETNVSMPHYVTEKVKELLAGVENPKVAAFGVTYKGNVDDMRESPA-DLIRNEGITVSAHDPHVESD........ 350
37 -10.200IDP92082 glycerol-3-phosphate dehydrogenase, putative [Toxoplasma gondii ME49] TGME49_107570 [Toxoplasma gondii ME49]  ali follow..  15  21................GPLRVAVIGSGNWGSVIGKICAQNAEQVRMWVFEEMIEGQKLTDI-VAVPDVVEACRGADLLVFVMPHQFVAKVCDQLAKANVVPSHARAISLLKGLYVEGGRPQLFSDTIRSKLNISGANVANDVAREEFAEATIGHSPDETDTALIWQQLFDKP-----------YFKVNTLPDVAGVQ--LCGAVKNVVALAAGFCDGLGLGTNTKSAIIRLGVEEMKQFGMIFFDNVIAETFFDSAGYADVRCAAEFVRQKGSKTWDQIEAEMLNGQKLQGTLTAREV---EVISSHEVDHLFPLFTVGRDPADLVRVFETREVRPHKTA 378
38 -10.100IDP01406 gene: wecC; UDP-N-acetyl-D-mannosamine dehydrogenase VC0918 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  11  3..................NKVSVIGLGYIGLPTAAVLASRGLDVVGVDVNAHAVDTIRSAVMTGKLKATLTAEPADAFLVAVPDLSYIEAAAKTIAPVLAKGNLVVLESTSPVGTTEKLAQWLAEARPDLTFPQQKGIAADVLPGYVLQELVSNDRVIGGVSKACSEKAVALYKTFVKGECIVTNARTAEMAKLTENSFRDVNI-AFANELSLVCNKLKIN--------------VWELIRLANRHPRVSILNPGPGVGG-----HCIAVDPWFIVNSCPDEAQLIRTAREVNDGKPH--DQVKQAADQFKKPIIACLGLAFKADIDDLRESPALD.... 336
39 -10.100IDP00702 gene: cap5O; capsular polysaccharide biosynthesis protein Cap5O SACOL0150 [Staphylococcus aureus subsp. aureus COL]  ali follow..  11  1..................MKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLEEVLSSGKLKVSTTPDASDVFIIAVPDISLVMRALDSILSFLEKGNTIIVESTIAPKTMDDFVKPVIENFTIGEDIYLVHCPERVLPGKILEELVHNNRIIGGVTEACIEAGKRVYRTFVQGEMIETDARTAEMSKLMENTYRDVNI-ALANELTKICNNLNIN--------------VLDVIEMANKHPRVNIHQPGPGVGG-----HCLAVDPYFIIAKDPENAKLIQTGREINNSMPA--DTTKQIIKVLSGNKVTVFGLTYKGDVDDIRESPAFD.... 328
40 -10.100IDP92023 glycerol-3-phosphate dehydrogenase, putative [Toxoplasma gondii ME49] TGME49_010260 [Toxoplasma gondii ME49]  ali follow..  14  15................GPLKVSVVGSGNWGSVIAKIVALNAQEVRMWVYEEMVDGEKLTDI-VALPDVVEACRDSDLLIFIMPHQFATKVCEQLAEARVVPGHARAITLLKGLHVENGKPTLFSDIFKTKLDISGANVANDVAREEFAEATIGYSPEETDAALIWQQLFDTP-----------YFKVNALPDVAGVQ--VCGAVKNVIAIAAGFCDGLGLGTNAKTAIIRLGVEEMKQFAMIFFDNIMAETFFDSAGYADVRCAAEFLRRGGKATWDQIEADLLKGQKLQGTLTTKEV---EVIAAYEVERLFPLFSVGRDPNDLIRVFKTSEVRQHKT. 371
41 -9.820IDP01969 gene: kfiD; putative UDP-glucose 6-dehydrogenase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj1441c [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  12  1..................MKIVIVGIGYVGLANAILFSKNNENEVVLLDIDENKIQSINNHKSPISNIKEAYFNADFAVIATPDTRSIENVLKDIK-NINSKINVIIKSTVPIGYTKTIKQKFNMSNIVF-------SPEFLREGSALYDSLYIIGDKSVLGKTIGDLFLKNIEKKNVDIFYMDSDEAESVKL--FSNTYLAMRVGFFNEVDSYARKHNLNSADIIKGI-----------------SADDRIGKYYNNPSFGYGGYCLPKDTKQLLANFYN--IPNSLIKAIVETNEIRKKFITQLILEKKPNILGIYRLIMKQNSDNFRNSVIIDIIKY 326
42 -9.730IDP90674 gene: hemA; glutamyl-tRNA reductase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0542 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  17  177...............LTQKKAVVIGAGEMGELAAKHLIAAGAKVIILNRDLQKAKDLCERLGDSLENLKKYLNQYEFFFSAT--NAPNAIITNSLIEELSYKRYFFDIA....................................................................................................................................................................................................................................... 273
43 -9.380IDP00126 gene: mviM; putative virulence protein NT01ST1449 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  8  1...............MRTLRIGIVGLGGIAQKAWLPVLTNGWTLQAWSPSRDKALRICESWRIPYDSLANLASSCDAVFVHSSTASHYAV----VSELLNAGVHVCVDKPLAENLRDAER............................................................................................................................................................................................................................ 105
44 -9.200IDP05340 putative oxidoreductase [Clostridium difficile 630] CD3450 [Peptoclostridium difficile 630]  ali follow..  17  1...............MKNIKMGMIGLGSIAQKAYLPILTK---VGAFTPNKVKREKICSDYRIMPDSIESLAKKCDCIFLHSSTETHYEI----IKILLNLGVHVYVDKPLASTVSQGEE............................................................................................................................................................................................................................ 105
45 -9.160IDP04636 gene: aroE1; shikimate 5-dehydrogenase [Francisella tularensis subsp. tularensis SCHU S4] FTT0238 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  14  120...............FAGKKVLVVGAGGAAKAVVAAVLKESPSLSITNRTLAKAKAIEELTKIKIIDFDNISDSFDIVINSTS................................................................................................................................................................................................................................................................. 192
46 -9.110IDP04232 gene: aroE; shikimate 5-dehydrogenase [Clostridium perfringens ATCC 13124] CPF_0693 [Clostridium perfringens ATCC 13124]  ali follow..  13  116...............IEGNSFFVLGAGGAARSILKYLEDSKAKIVLVSRDREKAFKKFKDFNINFMSYGELINEEFALINTTPCGMYPNINSVAVSEKVIKKFKVAVDIVYNPLETKFLKMAK......................................................................................................................................................................................................................... 226
47 -9.070IDP90864 gene: aroE; shikimate 5-dehydrogenase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0405 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  20  109.............DFDNIKKALILGAGGTALALAYVLKQKGVEVYIANRSKERFKDFLAYPTYLYKNLQ--DFDFDLVINSTS................................................................................................................................................................................................................................................................. 176
48 -9.020IDP91167 gene: aroE; shikimate 5-dehydrogenase STM3401 [Salmonella enterica subsp. enterica serovar Typhimurium]  ali follow..  19  117...............RPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTASRAEALAKIFAHTGS--KLDGCEFDLIINATS................................................................................................................................................................................................................................................................. 189
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. Discovering new genes with advanced homology detection. Trends Biotechnol. 2002 Aug;20(8):315-6.