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Query: IDP91202 gene: aroQ; 3-dehydroquinate dehydratase [Bifidobacterium longum DJO10A] BLD_0610 [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTKVIVVNGPNLGRLGVRQPDVYGRQDLDTLRKLCAEWGKDLGLEVEVRQTDDEAEMVRWMHQAADEKTPVVMNPAAFTHYSYALADAAHMVIDENLPLMEVHISNPSARDEFRKRSVISPVATGTITGMGFYGYKLALDAVAHLLSELast
1 -84.500IDP91202 gene: aroQ; 3-dehydroquinate dehydratase [Bifidobacterium longum DJO10A] BLD_0610 [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088]  ali  100  1MTKVIVVNGPNLGRLGVRQPDVYGRQDLDTLRKLCAEWGKDLGLEVEVRQTDDEAEMVRWMHQAADEKTPVVMNPAAFTHYSYALADAAHMVIDENLPLMEVHISNPSARDEFRKRSVISPVATGTITGMGFYGYKLALDAVAHLLSE 148
2 -79.100IDP02836 gene: aroQ; 3-dehydroquinate dehydratase [Bacillus anthracis str. `Ames Ancestor`] GBAA4423 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  46  1MKKVLLVNGPNLNRLGVREVNVYGKGTLATLEADMKQEAEAMGVELECFQSNHEGAIIDRIHEAEDIYEGIILNPGAFTHYSYAIRDAIASIS---IPVIEVHISNIHQRESFRHESVTAAVCAGQIVGFGFYGYKLALFALMEKLRE 145
3 -75.200IDP90541 3-dehydroquinate dehydratase [Vibrio cholerae O1 biovar eltor str. N16961] VC0297 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  40  5.SRILVLNGPNLNLLGLREPTHYGSQTLEQIVAILRDQAQKADIELEHLQSNREYELIEAIHQAFGKVDFIIINPAAFTHTSVALRDALLGVA---IPFIEVHLSNVHAREPFRHHSYLSDKAQGVICGLGAQGYEFALSAAIRALQA 148
4 -74.800IDP90771 gene: aroQ; 3-dehydroquinate dehydratase [Yersinia pestis CO92] YPO3660 [Yersinia pestis CO92]  ali follow..  36  5.FHILLLNGPNLNLLGTREPEKYGYTTLAEIVSQLEIQAQGMDVALSHLQSNAEHALIDSIHQARGNTDFILINPAAFTHTSVALRDALLGVQ---IPFIEIHLSNVHAREPFRHHSYLSDIAVGVICGLGADGYNFALQAAVNRLSK 148
5 -72.800IDP91207 3-dehydroquinate dehydratase [Bacteroides thetaiotaomicron VPI-5482] BT_2842 [Bacteroides thetaiotaomicron VPI-5482]  ali follow..  35  1.MRIQIINGPNINLLGKREPSIYGSVTFEDYLAELRKRYAD--LEIDYFQSNIEGEMIDCIQQVGFEVDGIILNAGAYTHTSIALQDAIRSVT---SPVIEVHISNVHSRESFRHVSMIACACKGVICGFGLNSYRLALEALLGN... 139
6 -6.630IDP01206 N-acetylmuramoyl-L-alanine amidase, family 3 BA_2446 [Bacillus anthracis str. Ames]  ali follow..  7  1MARYSLHAGHNSIVQGANYGNRKEHIMDRQVKDAVVAKLRALGHTVYDDTDEVGTTQAQNLNNIVSKTNSHLSKDIGWSNRGAKERKDLYVLSNTKAPAILIEIDNEADMAKWNPDKIANSIVYALTGQS.................. 170
7 -6.580IDP91262 conserved hypothetical protein TIGR00147 [Bacillus anthracis str. Sterne] NT05BA0365 [Bacillus anthracis str. Sterne]  ali follow..  18  2MKRARIIYNPTS-----------GRELFKKSLPEVLQKLEQAGYEASCHATTGPGDATVAARQAADRKFDVVIAAGGDGTLNEVVNGLVGHEHRPKFGIIPVGTTNDFARA..................................... 101
8 -6.140IDP02121 Short-chain dehydrogenase/reductase [Francisella tularensis subsp. tularensis SCHU S4] FTT0360 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  11  5.SKTILITGCSHGGIGNLGHRVFASARQQKDVEALSQEGFET-YLIDVTNYEYIDNALADILNKTGGSLDVIFNNAGYGQAGIDTKFLKQQFETNVFGLHNLTYKALKIMRKQGYGKIIQHSSVLGLVAMKYRGAYNASKYAIEGLTD 162
9 -6.120IDP90228 Transcription regulator [contains diacylglycerol kinase catalytic domain] BAS4713 [Bacillus anthracis str. Sterne]  ali follow..  15  6FEKVLLIVNPKA-----------GQGDLHTNLTKIVPPLAAAFPDLHILHTKEQGDATKYCQEFASKVDLIIVFGGDGT-VFECTNGLAPLEIRPTLAIIPGGTCNDFSRT..................................... 104
10 -5.950IDP01306 PTS system, cellobiose-specific IIB component VC1281 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  15  1MKKILLCCS--------------AGMSTSMLVKKMQQAAESKGIECKI-----DALSVNAFEEAIQEYDVCLLGP----QVRFQLEELRKTADEYGKNIAAI.............................................. 79
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;