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Query: IDP91207 3-dehydroquinate dehydratase [Bacteroides thetaiotaomicron VPI-5482] BT_2842 [Bacteroides thetaiotaomicron VPI-5482], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MRIQIINGPNINLLGKREPSIYGSVTFEDYLAELRKRYADLEIDYFQSNIEGEMIDCIQQVGFEVDGIILNAGAYTHTSIALQDAIRSVTSPVIEVHISNVHSRESFRHVSMIACACKGVICGFGLNSYRLALEALLGNKLast
1 -82.700IDP91207 3-dehydroquinate dehydratase [Bacteroides thetaiotaomicron VPI-5482] BT_2842 [Bacteroides thetaiotaomicron VPI-5482]  ali  100  1MRIQIINGPNINLLGKREPSIYGSVTFEDYLAELRKRYADLEIDYFQSNIEGEMIDCIQQVGFEVDGIILNAGAYTHTSIALQDAIRSVTSPVIEVHISNVHSRESFRHVSMIACACKGVICGFGLNSYRLALEALLGNK 140
2 -74.100IDP02836 gene: aroQ; 3-dehydroquinate dehydratase [Bacillus anthracis str. `Ames Ancestor`] GBAA4423 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  49  3.KVLLVNGPNLNRLGVREVNVYGKGTLATLEADMKQEAEGVELECFQSNHEGAIIDRIHEAEDIYEGIILNPGAFTHYSYAIRDAIASISIPVIEVHISNIHQRESFRHESVTAAVCAGQIVGFGFYGYKLALFALMEK. 142
3 -73.700IDP90771 gene: aroQ; 3-dehydroquinate dehydratase [Yersinia pestis CO92] YPO3660 [Yersinia pestis CO92]  ali follow..  44  5FHILLLNGPNLNLLGTREPEKYGYTTLAEIVSQLEIQAQDVALSHLQSNAEHALIDSIHQARGNTDFILINPAAFTHTSVALRDALLGVQIPFIEIHLSNVHAREPFRHHSYLSDIAVGVICGLGADGYNFALQAAVNR. 145
4 -73.500IDP90541 3-dehydroquinate dehydratase [Vibrio cholerae O1 biovar eltor str. N16961] VC0297 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  51  6.RILVLNGPNLNLLGLREPTHYGSQTLEQIVAILRDQAQDIELEHLQSNREYELIEAIHQAFGKVDFIIINPAAFTHTSVALRDALLGVAIPFIEVHLSNVHAREPFRHHSYLSDKAQGVICGLGAQGYEFALSAAIRA. 145
5 -72.800IDP91202 gene: aroQ; 3-dehydroquinate dehydratase [Bifidobacterium longum DJO10A] BLD_0610 [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088]  ali follow..  35  2TKVIVVNGPNLGRLGVRQPDVYGRQDLDTLRKLCAEWGKDLEVEVRQTDDEAEMVRWMHQAADEKTPVVMNPAAFTHYSYALADAAHMVILPLMEVHISNPSARDEFRKRSVISPVATGTITGMGFYGYKLALDAVAHL. 145
6 -6.490IDP05183 putative lipoprotein [Bacillus anthracis str. Ames] BA_5237 [Bacillus anthracis str. Ames]  ali follow..  10  5SYFLVFILICLVSAGCAKDKEGEKLEYNGRALVIGVVGEKPKDTFRNVKFEEMKLEELEKKSKEVDGFLIMKAHFQEAS-QYKNVFSSLKKPVFFIGLQDIFITKGIEYNSARKDVNAMYTQGF................ 133
7 -6.220IDP04466 gene: ansA; L-asparaginase I [Yersinia pestis CO92] YPO2161 [Yersinia pestis CO92]  ali follow..  21  5.SIYVAYGGTIGMQRSDNGYIPVSGHLQRQLALMPEFHRPEMPDFMTPEDWQHIANDIQQNYDLYDGFVILHGTMAFTASALSFMLENLAKPVI.............................................. 113
8 -5.960IDP04300 gene: purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit [Clostridium perfringens ATCC 13124] CPF_0672 [Clostridium perfringens ATCC 13124]  ali follow..  12  1MKVAIFFGSKSDI------------VMKGAGNALKEFGIPYNAYILSAHRVEKLIETLEKIEKEGCEVIIAGAGLAAHLPGVIASH--TILPVIGVPVRAAVEGMDALLSIVQMPKSIPVATVGINNSYNAGMLAV.... 124
9 -5.730IDP02782 gene: fabG; 3-ketoacyl-(acyl-carrier-protein) reductase [Bacillus anthracis str. `Ames Ancestor`] GBAA4874 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  13  1MRHALITAGTYSVTVTYHSDITAMKKMKETYKNMEERLQFVQADVTKKEDLHKIVEEAISRFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLV... 163
10 -5.650IDP91472 putative type III secretion system EscU protein [Vibrio parahaemolyticus RIMD 2210633] VPA1354 [Vibrio parahaemolyticus RIMD 2210633]  ali follow..  17  214.......................RMTFTEMKNELKETEGSPEIKSERKRQMREFAETPITKGRQPTFALANP---THILVPVCYDPKIERRPVVLKICTESLALE................................... 292
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 8 6 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rychlewski L, Jaroszewski L, Li W, Godzik A. Comparison of sequence profiles. Strategies for structural predictions using sequence information. Protein Sci. 2000 Feb;9(2):232-41.