Scheduled maintenance will begin on May 30th, 2025. Server will be temporarily unavailable — learn more.
current user: public
If you have questions about the server, please let us know.

Query: IDP91405 dehydrogenase [Vibrio vulnificus CMCP6] VV1_0801 [Vibrio vulnificus CMCP6], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310
# Score Template Links and tools%idFirst MIWLIGSGLMSIDYAKVLDAQGCDYQVVGRGSDSAASFTEKTGKAVICGGLAQHIANTKAVAEAAIVSVGVAQLYETTKQLIEAGVKKILVEKPGATTLAEIEELRQLSEQHGCAVYIAYNRRFFSSVLEAQRLIEQEGGVTSFNFELTEWAHVIEKIDKPQEVLNKWFLANSTHVADLAFYLGGKPRDICCFIQGSLNWHQAGSVFSGAGMTEQGALFNYAANWESAGRWSVEVLTKENRYVFRPMEALQVQKRGTIPLVAVEVDDALDKEFKPGLFKQVEAFLGDDARLLCRLEEQCSLFPIYEKMAGYQSLast
1 -96.100IDP91405 dehydrogenase [Vibrio vulnificus CMCP6] VV1_0801 [Vibrio vulnificus CMCP6]  ali  100  1MIWLIGSGLMSIDYAKVLDAQGCDYQVVGRGSDSAASFTEKTGKAVICGGLAQHIANTKAVAEAAIVSVGVAQLYETTKQLIEAGVKKILVEKPGATTLAEIEELRQLSEQHGCAVYIAYNRRFFSSVLEAQRLIEQEGGVTSFNFELTEWAHVIEKIDKPQEVLNKWFLANSTHVADLAFYLGGKPRDICCFIQGSLNWHQAGSVFSGAGMTEQGALFNYAANWESAGRWSVEVLTKENRYVFRPMEALQVQKRGTIPLVAVEVDDALDKEFKPGLFKQVEAFLGDDARLLCRLEEQCSLFPIYEKMAGYQS 313
2 -63.600IDP02458 putative oxidoreductase [Yersinia pestis CO92] YPO2259 [Yersinia pestis CO92]  ali follow..  13  7.VGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVHADWPAIPVVSDPQMLFND--PSIDLIVIPTPNDTHFPLAQSALAAG-KHVVVDKPFTVTLSQANALKEHADDAGLLLSVFHNRRWDSDFLTLKTLLAEGSLGNVVYFESHYRPEIRQRWREQAGAGGGIWYDLGPHLLDQALQLFGLPETLNVDLGMLRPGSQSVDYFHAVLSYPGQRVVLHSTVLAAAETARYIVHGTQGSYIKFGVDPQEDRLKAGERLPQADWGYDMRDGIYPAYYAGIRDAIWGTAPNPVPATEAIKVMELIELG--IAS 336
3 -60.500IDP00126 gene: mviM; putative virulence protein NT01ST1449 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  18  6.IGIVGLGGIAQKWLPVLTNTATLQGAWSPSRDKALRICESWRIP-YVDSLANLAS----SCDAVFVHSSTASHYAVVSELLNAG-VHVCVDKPLAENLRDAERLVALAAQKKLTLMVGFNRRFAPLYRELKTRLGTAASLRMDKHRTDSVGP---------HDLRFTLLDDYLHVVDTALWLAGGEAR---LASGTLLTSESGEMCYAEHHFSADKLQITTSMHRRAGSQRVQAVTDGGLYDVTDMREWREERGQGILIKPIP--SWQTTLEQRGFVGCARHFVQNQTVPETAGEQAILAQRVVEALW.... 301
4 -59.400IDP05340 putative oxidoreductase [Clostridium difficile 630] CD3450 [Peptoclostridium difficile 630]  ali follow..  15  6.MGMIGLGSIAQKYLPILTKSEEFVGAFTPNKVKREKICSDYRI-MPFDSIESLAK----KCDCIFLHSSTETHYEIIKILLNLG-VHVYVDKPLASTVSQGEELIELSTKKNLNLMVGFNRRFCPMYKEIKNNATEIVSINICKHGLNS---------LRNVRFDSTLIDDYIHVIDTALWLANEDVEISGEDLFLTD-NKNLIFVSHKLKGKNFSINTSMHRDSGTKLEQVEILSKGKIQRVKNLNVLEIEEGGNLTLKQS--GAWVNILKQKGFEDISNHFIENNIKPAINGEECIKAQRLLEKII.... 301
5 -55.200IDP95263 MviM protein [Acinetobacter baumannii ATCC 17978] YP_001083150 [Acinetobacter baumannii ATCC 17978]  ali follow..  11  2...................DVNDSVGIMDSHFPEAEFFTEFEEFEAYVE--DQKLKG--EKLDYVAICSPNYLHAPHMKYALKNG-IDVICEKPLVLNSEDLNMLAEYEKQYGAKVNSILQLRLHPSIIALRDKVQAAPADKVFDVDLTRGKWYLKSWKGVDNKSGGVATNIGVHFYDMLHFIFGKIVKNEVHY-------RDEKTASGYLEYERARVRWFLSIDANNLPEVQGEKLTYRSITIEN-EELEFSGGFTDLHTQSYQRVLEGKGYGVEENRAAIETVEVRVSPIIENPENPHP--LLAKVKK... 284
6 -51.900IDP00570 putative oxidoreductase YPO2042 [Yersinia pestis CO92]  ali follow..  18  239.VGIVGLGGIAQKYLPILTQAQQLVGAFSPNQAKAQPLCDSYRM-RYFSRLDTLAA----ASDAVFVHSSTASHFQVVHDLLQAG-VHVYVDKPLAETREQSEQLIELADKQHLALMVGFNRRFAPLYQQLKQQASSPVSLRMEKHRLSSI---------GPHDLGFTLLDDYLHVVDTALWLGGEGARLTGGAVQTN---AQGQMLYAEHHFQQGGCLITTSMHRQAGTQSVQVISDGACYHITDMRQWQQASAGQV--ISQPAPGWQTTLEQRGFTGAVHHFVSNQTRPQVSGEDAIVAQRMIERIL.... 534
7 -10.400IDP90757 gene: ilvC; ketol-acid reductoisomerase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0632 [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  13  21.VAIIGFGSQGHAHAMNLRDNGVNVTIGLREGSVSAVKAKNAGFEVV--SVSEASKIA----DVIMILAPDEIQADIFNVEIKPNLS.................................................................................................................................................................................................................................. 100
8 -10.100IDP02330 gene: ilvC-1; ketol-acid reductoisomerase [Bacillus anthracis str. `Ames Ancestor`] GBAA1419 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  14  20.VAIIGYGSQGHAHAQNLRDNGFDVVVGLRKGKSWDKAKED-----SVYTVAEAAKQA----DVVMILLPDELQPEVYEEEIAPNLQAFNVHFDQVKPPVNVDVFLVAPKGPGHLVR.................................................................................................................................................................................................... 137
9 -8.980IDP90877 oxidoreductase, zinc-binding dehydrogenase family [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj1548c [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  14  190.VAVAGFGGLGMMAVKYAVKMGAKVSVFARNENK-KADALAMGVSSFYTSCDK--NAVKERFDLIISTIPTPYNPAIYLDLLKFGGEMAIVGLPPH-GIAETQEMLDFSLKHGIYPET--ELITPQEIDKAYENLTSGKAKFRYVIDMTK................................................................................................................................................................... 357
10 -8.800IDP06064 3-hydroxyacid dehydrogenase [Helicobacter pylori J99] NP_223303 [Helicobacter pylori J99]  ali follow..  16  3.IGWIGLGAMGTPMATRLRDAGLEVSVYNRTESKAAPLKEK---VAVYTSPIDLAAKVDAAIDAVLATIAPLESLSLEKIAQKHQAT--YLEAPVSGSVGA-------AKAGALLILAAGDEEVISKLKPVLAHLGSQ............................................................................................................................................................................... 153
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 1 0 7   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.