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Query: IDP91618 gene: ECs2674; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB36097 [Escherichia coli O157:H7 str. Sakai], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MFPLNDLSLKTQSVQLNKITSNTESTIKQHELVSDDAIINELSSELVSCLGNDKFTPVSEDCNLLNMLSEFKLLREQCFRWGNYTLLFENYESYDKTGSITIEKNQGEGTLPIRHKLEFISTNIAELLDKLTKITDARLCKGFSDWASSVKEGGSNDLKENVDRALVRMFKCVKLHSNELDLSYLFLGSVPPLPDWIEMLSLVYNELDSIQVPESCKELELDFNNLTEFPQVPDGITLISVNNNLISHIDSFPPKAKKIFISHNKLSETPAIPDTAKVFDCGYNKIQEIRYFPKNLKEARIGYNNIEVVPAIPGNLKILFMECNPIKEAFLMPWTLTGICYEISQRKYIVTNPADYDKYSDMVKKHVIDGEELIIKYFMLast
1 -82.300IDP91618 gene: ECs2674; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB36097 [Escherichia coli O157:H7 str. Sakai]  ali  100  1MFPLNDLSLKTQSVQLNKITSNTESTIKQHELVSDDAIINELSSELVSCLGNDKFTPVSEDCNLLNMLSEFKLLREQCFRWGNYTLLFENYESYDKTGSITIEKNQGEGTLPIRHKLEFISTNIAELLDKLTKITDARLCKGFSDWASSVKEGGSNDLKENVDRALVRMFKCVKLHSNELDLSYLFLGSVPPLPDWIEMLSLVYNELDSIQVPESCKELELDFNNLTEFPQVPDGITLISVNNNLISHIDSFPPKAKKIFISHNKLSETPAIPDTAKVFDCGYNKIQEIRYFPKNLKEARIGYNNIEVVPAIPGNLKILFMECNPIKEAFLMPWTLTGICYEISQRKYIVTNPADYDKYSDMVKKHVIDGEELIIKYFM 379
2 -79.900IDP91619 gene: ECs2672; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB36095 [Escherichia coli O157:H7 str. Sakai]  ali follow..  92  1MFPLNDLSLKTQSVQLNKITSNTESTIKQHELVSDDAIINELSSELVSCLGNDKFTPVSEDSNLLNMLSEFKLLREQCFRWGNYTLLFENYGAYDKTGSITIEKSQGEGTLPIRHKLEFISTNIAELLDKLTKITDARLCKGFSDWASSVKEGASNDLKENVDRALVRMFKCVKLHSNELNLSSLSLGSVPPLPEWIEMLSLVYNELDSIQVPESCKELELDFNNLTEFPQVPDGITLISVNNNLISYIDSFPPKAKKIFICHNKLSEIPALPDTAKVFDCSENNIKEIRWFPKNLKEAYIEYNKIEVIPAIPGNLKLLCMKCNPIKEAFLMPWTLTGIRYEISQRKYIVMNPADYDKYSDMVKKHVIDGEEFIIKYYM 379
3 -36.100IDP91625 gene: ECs2073; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB35496 [Escherichia coli O157:H7 str. Sakai]  ali follow..  13  3.FPSIFNKIKPQ--SIQQHPEKNQLNWMLELNK-WKEERILTGEIHRPECRNEAAKRIN--CAFLSKQNDIDLSGLNLSTQPP---GLQNFTSINLDNNQLTHFD--ATNYDRLVKLSLNSNTLESINIHQGRNVSITHISMNNNCLRNIDID---------------------SSITYFSAAHNKLEFVQESCEWLQYLNLSHNQLTDIVTKEELLLLDLSHNKLASLHALFPNLNTLLINNNLLSEIKSNFCKVQTLNAANNQLEKINTYLSSIKSLRLDNNKITRIDSDIRSLFPIIKKSESLNFLNSGENNCPTIQLMLFNLFSPALKLNTGLAILSPGAFEDHSDGL........................... 340
4 -33.300IDP05663 hypothetical protein lmo0333 [Listeria monocytogenes EGD-e] lmo0333 [Listeria monocytogenes EGD-e]  ali follow..  14  209.LNLSSNRTLVNLSGVEDLVNLQELNVSANKALEDISQVASLPVLKEISAQGCNIKTLNPAGAVLPELETFYLQENDLTNLTS-LAKLPKLKNLYIKGNASLKSLETLNGATKLQLIDASNCTDLETLGDISGLSELEMIQLSGCSKLKEITSLKNLPNLVNITADSCAIEDLGPQLKTLTLDGCGITSIGTLLPKLEKLDLKENQITSIS-LPRLSYLDVSVNNLTTIGDLLPLLEWLNVSSNRLSDVSTLFPSLNYINISNNVIRTVGKMLPSLKEFYAQNNSISDISMIMPNLRKVDASNNLITNIGTFLPKLQSLDVHSNRITSTSVI-HDLPSLETFNAQTNLITNIG-TMDNLPDLTYVNLSFNRIPSLA... 626
5 -31.500IDP05666 gene: inlA; internalin A [Listeria monocytogenes EGD-e] lmo0433 [Listeria monocytogenes EGD-e]  ali follow..  13  36.ATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVS-QTDLDQVTTLQADRLGIKSIDG-VEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQITDIDP-LKNLTNLNRLELSSNTISDISSGLTSLQQLSFGNQVTDLKP---TTLERLDISSNKVSDISVLLTNLESLIATNNQISDLGILTNLDELSLNGNQLKDIGTLLTNLTDLDLANNQISNLAPLLTKLTELKLGANQISNISPLLTALTNLELNENQLEDISPILKNLTYLTLYFNNISDISPVLTKLQRLFFYNNKVSDVSSL-ANLTNINWLSAGHNQISDLTP-LANLTRITQLGLNDQAWTNAP... 421
6 -31.200IDP05561 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo2026 [Listeria monocytogenes EGD-e]  ali follow..  10  8.LLLLVLFMTVLPFQMLEAQAASTSWIEQESKNRQDITLADLETIQKIHV--FGADSIPNKISDYKNLTALEANYGTITEVPESVGSLKELVTLNVDENNLQEFPMVIFQLPKLEVLYISRGNITEIPTEITTLAS---------------------------------------HLKVLDVSNQKLVTIPDSILTTNWKAMAGNQIASDIPANYLDNFNSGGNMLEFYDNPTIDYLQKQDGGTIEVPLNTDFKQLTPDKTNLGLKSNIPLFSQHEFMYY--------------DDGTSANILTNGVATDVGDGYISTLSTNSNPFAKVRVPIKVTAPLKGADVTVQYLDSNGDTLATPDILS................ 346
7 -30.500IDP05081 putative cell surface protein, internalin proteins [Listeria monocytogenes EGD-e] lmo2027 [Listeria monocytogenes EGD-e]  ali follow..  9  34.LYPLPAPIIDV--PDEGLAKDMAKNLNKDSVNDVID-QDDLDALTGLGITNDSMQLLERAMFNNVNIVSVMEFGEDLTEFPD-ISTIPHLNTLFFNTPPEGVTLPDYQNYPEMVTITMSGSNLIGAIPDFTGMPDLSQLYMADMMITSDDVPDFHTI----------------PKLSTLDLSHNQLTNLPDFLTNLAELNLSFNNLTNTM-LSNLNNLNLDYNHLNELPSNVLNSIFIE---NQSGTVPDQIIKQGETCTIQLPIYFQLAEINMLVNPTVLGSYSADIPVEVVTTTNADTESITLDTS-ELSPGVYNFNVQFNDAYPITQEGCVYDWVLTVN.................................... 367
8 -30.000IDP00005 internalin, putative BA_0552 [Bacillus anthracis str. Ames]  ali follow..  12  341.LGVGSNGLVNIE-PISQMSGIVELNLEKNDIKDITS-LSKLTGLQSLNLEENYVSDVSS-LSNLINLYELKLATNEIRDIRP-IQELGKRIKIDAQRQKVFLDEAYMNEEVKIPVYDVNGTALQNIEQDMKLRQYMNKHNFERKNVNTPKEDLLTVKALKITDGKKEGITDFSTNVEELTLQNVNMKNAEFILRNLKSVDLSYNQIEDIK-LEDLEKLNVSDNGIKNVPELMQKLKTLDLSNNKLDNAAHQLENLDALLVNNNEINNLDEIVSKLNKLEMMSNKVRDISPLLKNLQWLNLSDNKIQDISTLMLDLLSLKLAGNEIRDVRPV-IQLAQWITVDIKNQKIVLEDGQMNQEIQIPIYDLEGEIFEDIE... 789
9 -27.400IDP91566 gene: ECs1568; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB34991 [Escherichia coli O157:H7 str. Sakai]  ali follow..  13  2............................................................................................................................................................................LPTSQLRPTGTFSYSAETSEEARASGRLYIKDCDIEYLPLPNEITSVTIENNNLTTLTGLPVNTQNLSVINCEKLQITDMPSTVKNLHIELTDSPFIHFISEGIECLTVCHCYISGVPE---SVRYLEIKGSATDSIKNVPNGLSSLSINSNQARIDNLISPSLKTLSLTGSNIILPEKLPESVTSVT................... 206
10 -27.400IDP00034 internalin, putative BA_1346 [Bacillus anthracis str. Ames]  ali follow..  12  1.MFLNTNEILDYSA-LKYMPNLKSLTVANAKIKDPSF-FANLKQLNHLALRGNEFSDVTP-LVKMDHLDSLDLSNNKITNVAP-LIEMKNVKSLYLSGNQIEDVTA-LAKMEQLDYLNLANNKITNV-APLSALKNVTYLTLAGNQIEDIKPLYS-------------------LPLTDLVLTRNKVKDLSGIMKQLEELWIGKNEIKDVT-MTQLKQLHLPNNELKDITPLLVNLQKLDLEANYISDLTPALKKLVFLSFVANEIRDVRPVIEKTAYINVQNQKVFLEETEKEVKVPIYEKDGKISTKIRLEGGTYSNDAVKWSTPGE.................................................. 318
11 -27.000IDP05548 hypothetical protein lmo0409 [Listeria monocytogenes EGD-e] lmo0409 [Listeria monocytogenes EGD-e]  ali follow..  11  1.MKSKNNYFKQIT-TIMTVVSLLIMVLGIQGNNDVKAADADLAEGIRAELQKSSVTDVVT-KEELESISQLSVYAKKIASIEG-LEYLTNLKFLNLNGNQITDLSP-LSNLTKLTEIYIGDNKISDI-SPLQNLTNVTDLYLVDNDISDLRPLAN-------------------TQMYSLRLGGNSNISDLNPVRRLNNLEVTGSILKDLT-VTSLTRLTLSDNQIEDLSPLLTKLDNIAAYSNKITDITPVLTRLQYLDLGSNEITDLSPVLQKLTSLHLANNQITNISMLLTNLTSLGLQNNKISDISVLLTHVTYLQLGYNQIVDVKII-GGLTNLTSLQLTQNHITDI-SPLANLTKIQYSDFSNQMITNLE... 380
12 -26.600IDP95186 gene: lmo2445; lmo2445 [Listeria monocytogenes EGD-e] CAD00523 [Listeria monocytogenes EGD-e]  ali follow..  11  1...........MLFAPTIKAQADTVPLPAPIIEAFPEAIAEAIAGELDKDSVNDTTQADLDTMTAIPLPSLGLTGEDLSVLNNEV--FTNAIELAIWSNNIGELPDLSEALPALENIEANGANITVFPDA--------------------------------------------PNLTNVDLSQNNFGFNIP-MEGLVSINMENAGLSGYIAEDIWMNM--------------PNLDSLILNENHLISIPELSQQLGTHSFANQTATYPPTTIKQGENLKVIYQALDFIAPSNHDLIIIKDNGRTLYEPPYPTYDGSYIETAGLQPGEHLLEISLGYNSGEYTGWYDFPVTITE......................... 300
13 -26.400IDP02440 hypothetical protein lmo0331 [Listeria monocytogenes EGD-e] lmo0331 [Listeria monocytogenes EGD-e]  ali follow..  12  44.TDLKETPKEKT--PNNNLKNQLVQAGTKTYNDYFP--DDNLAKEVAETMNKNADESV--TVEELAKVTKLDARSQGIEDSTG-IEYLTGLEVLNLEDNQLKSID--VSKNLNLKELTCSNNPLANL--DVSKNLALEELTCENNELTQLDVS--------------------NTALEYLYCPRNQLTKLDSKNSALRYLACDVNQLTNLDV-PALTNLGCTKNQLTDLDSQNPNLGTLVCSDNQLTNLDSQNQALENLACDNNELKNIDNQALSLKELSCENNQLTNLDTQNLALEILYCDDNQLTDLDRKNVNLLILFCNNNQLTNL-AVGETIAKVRCNNNQLKDVS............................. 369
14 -26.200IDP01745 hypothetical protein lmo2821 [Listeria monocytogenes EGD-e] lmo2821 [Listeria monocytogenes EGD-e]  ali follow..  14  1.....................MKTTKIVIASLVSLT--MVSNPLLTFAATNDVIDNTT--EITTDKETSSTQPTIKNTLKAGQTDDNFASEVAAAFEMQATDTI--SEEQLATLTSLDCHNSSITDM-TGIEKLTGLTKLICTSNNITTLDLSQN-------------------TNLTYLACDSNKLTNLDTPLTKLTYLNCDTNKLTKLDVSQLLTYLNCARNTLTEIDSHNTQLTELDCHLNKITKLDTPQTQLTTLDCSFNKITELDSQNKLLNRLNCDTNNITKLDNQNIQLTFLDCSSNKLTEIDTPLTQLTYFDCSVNPLTELDSTLSKLTTLHCIQTDLLEID............................. 321
15 -25.700IDP05076 hypothetical protein lmo0801 [Listeria monocytogenes EGD-e] lmo0801 [Listeria monocytogenes EGD-e]  ali follow..  9  1...........MKKLCTVILFLTLLLNGFVPNAHA-KTESPSADNNLQVAPPAAIKDLFPDPAMLKSLNLKKLNKKSTSDTVTQ-TELNSLTGSFQAINKGIKSIEGVEYLQNITELDVEKNQITDIAP-VANLKKLTTLLINTNQITDISPVAD-------------------ANLTTFYCGNNPISDISAVLTKLSIFNCYTANVEDIS-LVNLKTLSLGSNNIHDISDILTALEYLSFSNNPVENPEVILTNLNTLWLYNAQIRNIDFTLPKLKSVYLYNNQISNISEVWANIEYLELNNNQITDITPVLTTLKTLKLNDQIITNREIPFQKNISIENKVMDNFGNIVTPNNISDNGTYNSPTLSWNLNETKD... 363
16 -25.700IDP05553 hypothetical protein lmo1136 [Listeria monocytogenes EGD-e] lmo1136 [Listeria monocytogenes EGD-e]  ali follow..  12  2...............KKTIKITTSLLLSFACVFSIGTKPHTVEAEIVYSLTNPKPVNEIFTDPKLAQVVADWLKLPAATSSVT-QTQLNTIKALHFDSKGVQSLEG-VEYLKNLTQVFGYGNQVSDLGP-LSNLTKLEVIQMPRNQISDLTPIAN-------------------TALMSLDFEFNNLQTIEPILTNMLELNVSANPISDIN-MTQLEFLTLRDCEVSDLSPVLSNMLMFWAGRNNISDITPLMSKLLGLSLFGNQIKDVSVILTSLEDFDIKANQVSDISSLSTTLETLTLSFNQIIDISPLLTNLTRLELENQTRALDAVEIDNPLILPAPVIDENGSRVQPSKVSHAGVYANGEITWEGLQSNY... 358
17 -24.400IDP95476 internalin [Listeria monocytogenes EGD-e] NP_465993 [Listeria monocytogenes EGD-e]  ali follow..  12  34.LYPLPAPIIDV--PDDGLAKDMAKNLNKDSVNDVQDDLDALTGLETSTITNDSMQLLRAMFNNVTDVSIMEFGAKLTEPDITTIPHLKTLFFADPPGRLTRNLLPNYQNYPEMDTITMSGNNLIGSIPDFTGMPALKQLYMSEMLITSDELPNFNNI----------------PLLITLDLSSNQLTTIPDFIPNLTFLDLNANLLTDFQNLPKLTDLNLRHNNLTGTMV-LPSLESLNLDYNFLTELPSNVLDTIYVQSQNGELPDQTINQGDTCTIDLPIYEYIGISVIQLPTTVNEEGNTITVDTSALSPGEYKLDVSYNHNYATG................................................. 376
18 -24.300IDP91701 gene: SLIT3; slit homolog 3 protein precursor [Homo sapiens] NP_003053 [Homo sapiens]  ali follow..  14  44SVDCHGLGLRAVPRGIPR--NAERLDLDRNNITRITMDFAGLKNLRVLHLEDNQVSVIERAFQDLKQLERLRLNKNKLQVLPELLQSTPKLTRLDLSENQIQGIPRKARGITDVKNLQLDNNHISCIEDGFRALRDLEILTLNNNNISRILVTSFNHMP----------------KIRTLRLHSNHLYMAPVHLRGFNVADVQKKEYVCPAPHSEPNIVDCRGKGLMEIPNLPEGIVEIRLEQNSIKAIPAGAKKLKRIDISKNQISDIAPDLKSLTSLVLYGNKITEIAKGLVSLQLLLLNANKINCLRV-LQNLNLLSLYDNKLQTISKLFAPLQSIQTLHLAQNPF.............................. 439
19 -23.800IDP05656 hypothetical protein lmo0171 [Listeria monocytogenes EGD-e] lmo0171 [Listeria monocytogenes EGD-e]  ali follow..  12  90.TSENSKTYAEL--PDVNLAKIIAKNISGTEDINAEVSEAELQTITNLVATNQNITSL-TGIEHLTALENINVNNNELTTIDSL------------------------FNIPTLKSISANNNKITGNFSLVKTLP----------------------------------------ELHTLEVLGNAITELDENQPNLVTLSADELELKKLTL-----------KNLSQLNGLGRIASSISIDWGDLESVTMNLPEIISVDISGNYLDSDDENLPAVKNLDISSNELTRLPKINDLLTTINVRSNKIDRLESSVPKLATLNADKQAVTLS.................................................. 351
20 -23.300IDP05423 gene: inlH; internalin H [Listeria monocytogenes EGD-e] lmo0263 [Listeria monocytogenes EGD-e]  ali follow..  13  4.................RWNSVFKLVLMVTAILGLSTTSQGVEVRAESITQPTAINVI-FPDPALANAIKIAAGKSNVTDTVT-QADLDGITTLSAFGTGVTTI-EGVQYLNNLIGLELKDNQITDL----TPLKNL-------------------------------------TKITELELSGNPLKNVSAILQSIKTLDLTSTQITDVT-LSNLQVLYLDLNQITNISPLLTNLQYLSIGNAQVSDLTPLLSKLTTLKADDNKISDISPLASNLIEVHLKNNQISDVSPLTSNLFIVTLTNQTITNQPVFNNLVVPNVVKGPSGAPI.................................................. 289
21 -23.000IDP02569 gene: inlE; internalin E [Listeria monocytogenes EGD-e] lmo0264 [Listeria monocytogenes EGD-e]  ali follow..  8  12VTLAVVLAITFW-VGMSSKEVQAAVIEHPTPINEIFT-DPVLTDNVKTLLGKADVTDE-VTQTDLDSVTHLSAKSAGITTIEG-LQYLTNLSELELIDNQVTDLNP-LTNLTKITELRLSGNPLKDV-SALAGLKNLKTMDLIYTDITDVTPLAG-------------------SNLQVLNLDINQITDITPLLSNLQFLSFGSTQVSDLT-LSKLTTLNAMNSKVSDVSPLLSNLTEVYLEENQISDVSPLLPNLSIVTLTNQTITNQPVFNKPIVPNVVTGLSGELIATSPNLTWDLNSFINSVSYTFNQSVKNTTAPFSGTVTQPLTEV............................................... 342
22 -22.300IDP05755 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo0732 [Listeria monocytogenes EGD-e]  ali follow..  12  2..........KKAFLCLSAIVLSLNFVWINPITSASKIETTKETNQQVNLKNNVTDVTSEDLGGQTWLNEVNRQLAPKT-----------------------DVNLTFEDLAKITTISLNNRSLTEVPPEIKNLV----------------------------------------SLQRLYLFSNKLSEIPAELGELT----------------KLTELRLDYNELSKIPDGLGNISEIALQNNRLVSLYENRTGKNEVNVSGNQVTNSQQSEPSVYSYPSSTPEYSHIKANNSFISNLTMNLTPFLKNSPTFINLQVVYMFNSELFD................................................... 261
23 -21.900IDP01916 hypothetical protein lmo0327 [Listeria monocytogenes EGD-e] lmo0327 [Listeria monocytogenes EGD-e]  ali follow..  12  2........LKKIFIALIALVVIINTVSFTSVSASTPTWLE-----QTMNNNEPFIKEIETETGKTANITQTDL---------------EAITALRV-------------------------TGASDIPANIDMLT----------------------------------------HLTLLKAVQGTISSVPNSVGNLK----------------ELKILNLNTNHLSNFPTIVYQLP-----------------KLEELQLNDGTIEEIPNMASHLKFLTVNNNRLVKVPTIIFSTNWSNSSTGELDLFTTGNQIVTDI............................................................ 199
24 -20.900IDP05699 hypothetical protein lmo2396 [Listeria monocytogenes EGD-e] lmo2396 [Listeria monocytogenes EGD-e]  ali follow..  10  1........MYKLVKIILALFLITTVFLPFSNVKAAPTDVVNIPDPVL----NSGLKNI-IGNPFLDEITEANMATITVADLSN-MSGAPGYPVTGLIKD------TGLDKAVNMTKLYFSNQS------QIKNLDKIKNL----------------------------------PNLKKIVAVTTGLNNISALMPALEEVELGGDYITDFT-KENLTSFSYNSYAWSNPAYHQINNDEF----KNFTKL----KSLVKLDLTWNNITDLSPLNDHITNLNLNYNQFTNVAPIMKNLKVLYLNNNNLTSIDALLRGLTIAYADNNNITDLSNL-KNFFEAMVAQGDYEGL.............................. 292
25 -20.700IDP91680 INLB_LISMO [Listeria monocytogenes]  ali follow..  9  4.KHNPRRKYCLI-SGLAIIFSLWIIIGNGAKVQAETITDDAFAETIKDNLKKKSVTDA-VTQNELNSIDQIIANNSDIKSVQG-IQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVKDL----SSLKDL-------------------------------------KKLKSLSLEHNGISDINGLLPQLESLYLGNNKITDIT-LTKLDTLSLEDNQISDIVPLLTKLQNLYLSKNHISDLRALLKNLDVLELFSQECLNKPSNLVVPNTVKNTDGSLVTPEIISDDYEKPNVKWHLPEFTNEVIFYQPVTIGKAKARFHGRVT-QPLKEVYTVSYDVDGTVIKTK......................... 337
26 -20.100IDP02719 gene: inlG; internalin G [Listeria monocytogenes EGD-e] lmo0262 [Listeria monocytogenes EGD-e]  ali follow..  15  16..............................................................................................................................................................................TAILGISLWVNASHGM----KAQAESIAQPAPINEIFTDPALADEELGKTSVTDEVTQLNQITKLEADDKGINSIEGILTNLNMLGVSSNQITNITPLANNLDSLYLGDNKISDVTPLLTQLTFVQLSINQIKDVLANLTKLNYLDLRENQISDASPL-VNMTDLTVLHLEKQQITAA........................... 201
27 -19.800IDP05426 hypothetical protein lmo0610 [Listeria monocytogenes EGD-e] lmo0610 [Listeria monocytogenes EGD-e]  ali follow..  12  9GLCILLIMPFTISF-SANVSAEENISIKAAQDVVN----PALKSYLNGLLGQPSTSDITEA--QMDTITDVTISNASLTDLTG-LDYAHNLTILHLTNTGVTDYSL-VANIPSLTNLNISGSNLTT--NSIPDLNGL-------------------------------------TNVTNLNLSSGKLDN---------------SALTKFNKLPNLTFLNLDNNSITDFMPLLPNLASLFIQFCGVNDFRGIFPKLTNLAAFGQNVGSAILINSKSSALNYNEANQTIFVPFMTERSMNFDGYLFPFTTNTASSTLNGVQISGSRLS.................................................... 288
28 -19.800IDP05549 hypothetical protein lmo0549 [Listeria monocytogenes EGD-e] lmo0549 [Listeria monocytogenes EGD-e]  ali follow..  12  1...........MKFNWKVVLLFVLILAFIVPVYSK-AVETGKEVPKSPELLDDKSSTL-KNVNTPKNLKASPLTIPANSTIADLF----------------------DEGMAKTIANQLGRTENN--------------------------------------------------NFQTPTKTDWKVDDVVTELNRMWYLTSVATSIEGIQYLPNLYDVRLQFDKFLKAPNGYSQLYRLNINNGNISDISPLAPTLNDIDLGGNNISDLSLFPKNLEEISLERNNISDVSPL-TKIKIFNLDENHITDLSSLMPNLQRLYVRYQTLDMEP................................................. 275
29 -19.300IDP01918 hypothetical protein lmo0514 [Listeria monocytogenes EGD-e] lmo0514 [Listeria monocytogenes EGD-e]  ali follow..  10  1MKKALKLFLATI-CMFIMIYPSTAAHAEETNIVNIPDA--NLKTYLNGLLKQASDAPITK--TQMNTIQTVTLSGSTYTDLTG-LEEAGNLVTLSLNNTNIQTLEP-IKNQTSLTYLTVGGDNVKDS--LFVDLNGL-------------------------------------VNLQSLSINGSEVTHN---------------VFKTFNKLPKLTYLYAQNSKITDISALASALTTLFLQFDGIDDFRPLFESFKNGNLKALAAFGQNITLKSGKLDYNETNQTLYLPFSPKPLTSFDGTVAPFSKSTSA................................................................... 265
30 -18.400IDP01994 hypothetical protein lmo1290 [Listeria monocytogenes EGD-e] lmo1290 [Listeria monocytogenes EGD-e]  ali follow..  12  2.............................................................................................................................SVKSNIVKIGVCFAVLAVPVSQTTLPVFAAEQPGLKASQDNVNIPDSTFKAYLNGLLGQASTANITEAMDSLTYITLANINVTDIEYAHNIKDLTINNIHATNYNQILSNLERLRIMGADVTSDKSGLTNLTLLDLSHSAHDDSINTLPKVTSIDLSYNAITDIMPLMPELKSLNIQFDGVHDYRGIFPKLNTLLAYSQTIGGKKLINSKSSKLTYNAENQTLYVPF........................... 249
31 -17.500IDP02661 hypothetical protein lmo1289 [Listeria monocytogenes EGD-e] lmo1289 [Listeria monocytogenes EGD-e]  ali follow..  13  52..............................................................................................................................................................................KKELNLYLNQAENADIEAQMATFRNITLNSGDLTGIEYLKNITTLSINNISYEPIQTL-SSLEKLVINGENVNA--SVLSNLTFLDLSRTNIDDT-SNIPNLNKLDISNNKITKISELLPSLQELRVSDCQITNFKGIFPNLTAFYGDGQLFGIDSFETDGFKNIKSSELTFDAN.............................. 243
32 -14.300IDP92552 gene: NOD2; nucleotide-binding oligomerization domain-containing protein 2 [Homo sapiens] NP_071445 [Homo sapiens]  ali follow..  11  773..SVGPTECAALAFVLQHLRRPVALQLDYNSVGDVEQLLPCLGVCKALYLRDNNISDLIECALHCEQLQKLALFNNKLTDMAKLLACRQNFLALRLGNN------------------YITAAGAQVLAEGLRGNTSLQFLGFWGNRVG--------------------------------DEGAQALAEALGDHQSLRWLSLVGNNIGSLAKNVMLEELCLEENHLQD-------------GVCSLAEGLKKNSSLKILKLSNNCITY-------------GAEALLQALERNDTILEVWLRGNTFSL-----EEVDKLGCRDTRLL.................................................... 1039
33 -12.200CPX_91662_05666 Complex of CADH1_HUMAN with INLA_LISMO [Undefined organism]  ali follow..  14  984TQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQITDIDP-LKNLTNLNRLELSSNTISDISALSG-LTSLQQLS--GNQVTDLKP-LANLTTLERLDISSNKVSDI----SVLAKL-------------------------------------TNLESLIATNNQISDITPLLTNLDELSLNGNQLKTLASLTNLTDLDLANNQISNLAPLSTKLTELKLGANQISNISPLLTALTNLELNENQLEDISPISNNLTYLTLYFNNISDISSSLTKLQRLFFYNNKVSDVSSLLTNINWLSAGHNQISDLTPL-ANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATI 1330
34 -9.990IDP91553 gene: ECs5048; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB38471 [Escherichia coli O157:H7 str. Sakai]  ali follow..  7  4..NGLNNMFFPLCLINDNHSSLSHTKKTKSDNYSKHHKNTLIDALSLFKMDDHEKDLIQKMKRIYDSLPSGKITKETDRKIHKYFIDIASYANNKCDDRITRRVYLNKDKEVSIKVVYFINNVTVHNNTIEIPQTVNGGYDFSHLSLKGIVIKDEDLSNSNFAGCRLQNAIFQDCNMYKTNFNFAIMEKILFDNCILDDSYFAQIKMTDGTL-VQFYNATMNRANIKNTFLDYSNFYMAYMAEVNLYKVIAPYINLFRADLSFSKLDLINFKHADLSRVNLNKAILQNINLIDSKLFFTRLTNTFLEMVICTDSNMANVNFNNANLNNCHFNCSVLTKAWMFNTRLYRVNFDEASVQGMG................... 373
35 -9.390IDP01014 gene: pipB2; secreted effector protein STM2780 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  11  152..............................................................................................................................................................................MNLKGAVLTGANLTSENLCDADLSGANLEGAVLFMADC-ANFKGANLSGTSLGDSNFKNACLEDSIMCGATLDHANLTGANLQHASLLGCSMIECNCSGANMDHTNLSGATLIRADMSGATLQGATIMAAIMEGAVLTRANLRKASFISTNLDGADLAEANLNNTCFKDCTLTDLRTEDATMSTST................... 338
36 -9.210IDP91295 SopD-like protein STM0972 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  8  208..................................................................................................................................................................................................TEEEKNKLRCLQMGSFNITTQFFKIGYWELEGEVLFDMVHSYLLQAYKPSLSSDLIETNTMSDVLNKDYDDYQNNKRIDAILRRIYRSHNNTLFISEKSSCRNML................................................................................ 318
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.