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Query: IDP91619 gene: ECs2672; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB36095 [Escherichia coli O157:H7 str. Sakai], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MFPLNDLSLKTQSVQLNKITSNTESTIKQHELVSDDAIINELSSELVSCLGNDKFTPVSEDSNLLNMLSEFKLLREQCFRWGNYTLLFENYGAYDKTGSITIEKSQGEGTLPIRHKLEFISTNIAELLDKLTKITDARLCKGFSDWASSVKEGASNDLKENVDRALVRMFKCVKLHSNELNLSSLSLGSVPPLPEWIEMLSLVYNELDSIQVPESCKELELDFNNLTEFPQVPDGITLISVNNNLISYIDSFPPKAKKIFICHNKLSEIPALPDTAKVFDCSENNIKEIRWFPKNLKEAYIEYNKIEVIPAIPGNLKLLCMKCNPIKEAFLMPWTLTGIRYEISQRKYIVMNPADYDKYSDMVKKHVIDGEEFIIKYYMLast
1 -83.000IDP91619 gene: ECs2672; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB36095 [Escherichia coli O157:H7 str. Sakai]  ali  100  1MFPLNDLSLKTQSVQLNKITSNTESTIKQHELVSDDAIINELSSELVSCLGNDKFTPVSEDSNLLNMLSEFKLLREQCFRWGNYTLLFENYGAYDKTGSITIEKSQGEGTLPIRHKLEFISTNIAELLDKLTKITDARLCKGFSDWASSVKEGASNDLKENVDRALVRMFKCVKLHSNELNLSSLSLGSVPPLPEWIEMLSLVYNELDSIQVPESCKELELDFNNLTEFPQVPDGITLISVNNNLISYIDSFPPKAKKIFICHNKLSEIPALPDTAKVFDCSENNIKEIRWFPKNLKEAYIEYNKIEVIPAIPGNLKLLCMKCNPIKEAFLMPWTLTGIRYEISQRKYIVMNPADYDKYSDMVKKHVIDGEEFIIKYYM 379
2 -79.900IDP91618 gene: ECs2674; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB36097 [Escherichia coli O157:H7 str. Sakai]  ali follow..  92  1MFPLNDLSLKTQSVQLNKITSNTESTIKQHELVSDDAIINELSSELVSCLGNDKFTPVSEDCNLLNMLSEFKLLREQCFRWGNYTLLFENYESYDKTGSITIEKNQGEGTLPIRHKLEFISTNIAELLDKLTKITDARLCKGFSDWASSVKEGGSNDLKENVDRALVRMFKCVKLHSNELDLSYLFLGSVPPLPDWIEMLSLVYNELDSIQVPESCKELELDFNNLTEFPQVPDGITLISVNNNLISHIDSFPPKAKKIFISHNKLSETPAIPDTAKVFDCGYNKIQEIRYFPKNLKEARIGYNNIEVVPAIPGNLKILFMECNPIKEAFLMPWTLTGICYEISQRKYIVTNPADYDKYSDMVKKHVIDGEELIIKYFM 379
3 -37.200IDP91625 gene: ECs2073; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB35496 [Escherichia coli O157:H7 str. Sakai]  ali follow..  13  3.FPSIFNKIKPQ--SIQQHPEKNQLNWMLELNK-WKEERILTGEIHRPECRNEAAKRI--NCAFLSKQNDIDLSGLNLSTQPPG---LQNFTSINLDNNQLTHFD--ATNYDRLVKLSLNSNTLESINIHQGRNVSITHISMNNNCLRNIDID---------------------SSITYFSAAHNKLEFVQESCEWLQYLNLSHNQLTDIVTKEELLLLDLSHNKLASLHALFPNLNTLLINNNLLSEIKSNFCKVQTLNAANNQLEKINTYLSSIKSLRLDNNKITRIDSDIRSLFPIIKKSESLNFLNSGENNCPTIQLMLFNLFSPALKLNTGLAILSPGAFEDHSDGL--DVDNELFHYTINKAYTPYNIHTYKT 365
4 -34.300IDP05663 hypothetical protein lmo0333 [Listeria monocytogenes EGD-e] lmo0333 [Listeria monocytogenes EGD-e]  ali follow..  14  209.LNLSSNRTLVNLSGVEDLVNLQELNVSANKALEDISQVASLPVLKEISAQGCNIKTLETSLAKLPKLKNLYIKGNASLKSLETLNGATKLQLIDASNCTDLETLGDISGLSELEMIQLSGCSKLKEITSLKNLPNLVNITADSCAIEDLPKLQTLVLSDNENLTNITAITDL-PQLKTLTLDGCGITSIGTLLPKLEKLDLKENQITSIS-LPRLSYLDVSVNNLTTIGDLLPLLEWLNVSSNRLSDVSTLFPSLNYINISNNVIRTVGKMLPSLKEFYAQNNSISDISMIMPNLRKVDASNNLITNIGTFLPKLQSLDVHSNRITSTSVI-HDLPSLETFNAQTNLITNIG-TMDNLPDLTYVNLSFNRIPSLA... 626
5 -32.900IDP05561 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo2026 [Listeria monocytogenes EGD-e]  ali follow..  10  8.LLLLVLFMTVLPFQMLEAQAASTSWIEQESKNRQDITLADLETIQKIHV--FGADSIPNKISDYKNLTALEANYGTITEVPESVGSLKELVTLNVDENNLQEFPMVIFQLPKLEVLYISRGNITEIPTEITTLA---------------------------------------SHLKVLDVSNQKLVTIPDSILTTNWKAMAGNQIASDIPANYLDNFNSGGNMLEFYDNPTIDYLQKQDGGTIEVPLNTDFKQLTPDKTNLGLKSNIPLFSQHEFMYY--------------DDGTSANILTNGVATDVGDGYISTLSTNSNPFAKVRVPIKVTAPLKGADVTVQYLDSNGDTLATPDILS................ 346
6 -32.200IDP05666 gene: inlA; internalin A [Listeria monocytogenes EGD-e] lmo0433 [Listeria monocytogenes EGD-e]  ali follow..  14  36.ATITQDTPINQIFTDTALAEKMKTVLGKTNVTDTVS-QTDLDQVTTLQADRLGIKSID-GVEYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQITDIDP-LKNLTNLNRLELSSNTISDISSGLTSLQQLSFGNQVTDLKP---TTLERLDISSNKVSDISVLLTNLESLIATNNQISDLGILTNLDELSLNGNQLKDIGTLLTNLTDLDLANNQISNLAPLLTKLTELKLGANQISNISPLLTALTNLELNENQLEDISPILKNLTYLTLYFNNISDISPVLTKLQRLFFYNNKVSDVSSL-ANLTNINWLSAGHNQISDLTP-LANLTRITQLGLNDQAWTNAP... 421
7 -31.700IDP05081 putative cell surface protein, internalin proteins [Listeria monocytogenes EGD-e] lmo2027 [Listeria monocytogenes EGD-e]  ali follow..  9  34.LYPLPAPIIDVFP-DEGLAKDMAKNLNKDSVNDVID-QDDLDALTGLGITNDSMQLLERAMFNNVNIVSVMEFGEDLTEFPD-ISTIPHLNTLFFNTPPEGVTLPDYQNYPEMVTITMSGSNLIGAIPDFTGMPDLSQLYMADMMITSDDVPDFHTI----------------PKLSTLDLSHNQLTNLPDFLTNLAELNLSFNNLTNTMNLSNLNNLNLDYNHLNELPSNVLNSIFI---ENQSGTVPDQIIKQGETCTIQLPIYFQLAEINMLVNPTVLGSYSADIPVEVVTTTNADTESITLDTS-ELSPGVYNFNVQFNDAYPITQEGCVYDWVLTVN.................................... 367
8 -31.100IDP00005 internalin, putative BA_0552 [Bacillus anthracis str. Ames]  ali follow..  12  341.LGVGSNGLVNIE-PISQMSGIVELNLEKNDIKDITS-LSKLTGLQSLNLEENYVSDVSS-LSNLINLYELKLATNEIRDIRP-IQELGKRIKIDAQRQKVFLDEAYMNEEVKIPVYDVNGTALQNIEQDMKLRQYMNKHNFERKNLLTVKALKITDGKKEGITDFSGLEF---TNVEELTLQNVNMKNAEFILRNLKSVDLSYNQIEDIK-LEDLEKLNVSDNGIKNVPELMQKLKTLDLSNNKLDNAAHQLENLDALLVNNNEINNLDEIVSKLNKLEMMSNKVRDISPLLKNLQWLNLSDNKIQDISTLMLDLLSLKLAGNEIRDVRPV-IQLAQWITVDIKNQKIVLEDGQMNQEIQIPIYDLEGEIFEDIE... 789
9 -27.900IDP05548 hypothetical protein lmo0409 [Listeria monocytogenes EGD-e] lmo0409 [Listeria monocytogenes EGD-e]  ali follow..  13  1.MKSKNNYFKQIT-TIMTVVSLLIMVLGIQGNNDVKAADADLAEGIRAELQKSSVTDVVT-KEELESISQLSVYAKKIASIEG-LEYLTNLKFLNLNGNQITDLSP-LSNLTKLTEIYIGDNKISDISP-LQNLTNVTDLYLVDNDISDLRPLANL------------------TQMYSLRLGGNSNISDLNNMTRLNNLEVTGSILKDLT-VTSLTRLTLSDNQIEDLSPLLTKLDNIAAYSNKITDITPVLTRLQYLDLGSNEITDLSANLQKLTSLHLANNQITNISMLLTNLTSLGLQNNKISDISVLLTHVTYLQLGYNQIVDVKII-GGLTNLTSLQLTQNHITDI-SPLANLTKIQYSDFSNQMITNLE... 380
10 -27.900IDP00034 internalin, putative BA_1346 [Bacillus anthracis str. Ames]  ali follow..  11  1.MFLNTNEILDYSA-LKYMPNLKSLTVANAKIKDPSF-FANLKQLNHLALRGNEFSDVTP-LVKMDHLDSLDLSNNKITNVAP-LIEMKNVKSLYLSGNQIEDVTA-LAKMEQLDYLNLANNKITNVAP-LSALKNVTYLTLAGNQIEDIKPLYSL-------------------PLTDLVLTRNKVKDLSGIMKQLEELWIGKNEIKDVT-MTQLKQLHLPNNELKDITPLLVNLQKLDLEANYISDLTPALKKLVFLSFVANEIRDVRPVLSKTAYINVQNQKVFLEETEKEVKVPIYEKDGKISTKIRLEGGTYSNDAVKWSTPGE.................................................. 318
11 -27.800IDP91566 gene: ECs1568; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB34991 [Escherichia coli O157:H7 str. Sakai]  ali follow..  14  2..............................................................................................................................LPTSQLRPTGTF------SYSAETSADIKSEITPIQIEEA--------RASGRLYIKDCDIEYLPQLPNEITSVTIENNNLTTLTLPVNTQNLSVINCEKLQITDMPSTVKNLHIELTDSPFIHFISEGIECLTVCHCYISGVP---ESVRYLEIKGSATDSIKNVPNGLSSLSINSNQARIDNLISPSLKTLSLTGSNIILPEKLPESVTSVTIHAEQKTTWNIGVEGMPDGLDL................. 228
12 -27.400IDP95186 gene: lmo2445; lmo2445 [Listeria monocytogenes EGD-e] CAD00523 [Listeria monocytogenes EGD-e]  ali follow..  10  1...........MLFAPTIKAQADTVPLPAPIIEAFPEAIAEAIAGELDKDSVNDTTQADLDTMTAIPLPSLGLTGEDLSVLNNEV--FTNAIELAIWSNNIGELPDLSEALPALENIEANGANITVFPDA--------------------------------------------PNLTNVDLSQNNFGFNIPKMEGLVSINMENAGLSGYIAEDIWMNM--------------PNLDSLILNENHLISIPEDIFLSQ-----------------QLGTHSFANQTATYPPTTIKQGENLKVIYQALDFIAPSNHDLIIIKDNGRTLYEPPYPTYDGSYMYTIETAGLQPGEHLLEISLGYNSGEYTGWYDFPVTITE.. 300
13 -26.800IDP01745 hypothetical protein lmo2821 [Listeria monocytogenes EGD-e] lmo2821 [Listeria monocytogenes EGD-e]  ali follow..  14  4.TKIVIASLVSL--TMVSNPLLTFAATNDVIDNTTE--ITTDKETSSTQPTIKNTLKAGQTDDNFASEVAAAFEMQATDTI--SEEQLATLTSLDCHNSSITDM-TGIEKLTGLTKLICTSNNITTL--DLSQNTNLTYLACDSNKLTNLDVTPL-------------------TKLTYLNCDTNKLTKLDSQNPLLTYLNCARNTLTEIDVSHQLTELDCHLNKITKLDTPQTQLTTLDCSFNKITELDSQNKLLNRLNCDTNNITKLDNQNIQLTFLDCSSNKLTEIDTPLTQLTYFDCSVNPLTELDSTLSKLTTLHCIQTDLLEI.................................................. 320
14 -26.700IDP02440 hypothetical protein lmo0331 [Listeria monocytogenes EGD-e] lmo0331 [Listeria monocytogenes EGD-e]  ali follow..  12  44.TDLKETPKEKT--PNNNLKNQLVQAGTKTYNDYFP--DDNLAKEVAETMNKNADESV--TVEELAKVTKLDARSQGIEDSTG-IEYLTGLEVLNLEDNQLKSI--DVSKNLNLKELTCSNNPLANL--DVSKNLALEELTCENNELTQLDVSQN-------------------TALEYLYCPRNQLTKLDSKNSALRYLACDVNQLTNLDV-PALTNLGCTKNQLTDLDSQNPNLGTLVCSDNQLTNLDSQNQALENLACDNNELKNIDNQALSLKELSCENNQLTNLDTQNLALEILYCDDNQLTDLDRKNVNLLILFCNNNQLTNL-AVGETIAKVRCNNNQLKDVSSLPD......................... 373
15 -26.300IDP05553 hypothetical protein lmo1136 [Listeria monocytogenes EGD-e] lmo1136 [Listeria monocytogenes EGD-e]  ali follow..  12  2...............KKTIKITTSLLLSFACVFSIGTKPHTVEAEIVYSLTNPKPVNEIFTDPKLAQVVADWLKLPAATSSVT-QTQLNTIKALHFDSKGVQSL-EGVEYLKNLTQVFGYGNQVSDLGP-LSNLTKLEVIQMPRNQISDLTPIANL------------------TALMSLDFEFNNLQTIEPILTNMLELNVSANPISDIN-MTQLEFLTLRDCEVSDLSPVLSNMLMFWAGRNNISDITPLMSKLLGLSLFGNQIKDVSVILTSLEDFDIKANQVSDISSLSTTLETLTLSFNQIIDISPLLTNLTRLELENQTRALDAVEIDNPLILPAPVIDENGSRVQPSKVSHAGVYANGEITWEGLQSNY... 358
16 -26.200IDP05076 hypothetical protein lmo0801 [Listeria monocytogenes EGD-e] lmo0801 [Listeria monocytogenes EGD-e]  ali follow..  10  1...........MKKLCTVILFLTLLLNGFVPNAHA-KTESPSADNNLQVAPPAAIKDLFPDPAMLKSLNLKKLNKKSTSDTVT-QTELNSLTGSFQAINKGIKSIEGVEYLQNITELDVEKNQITDI-APVANLKKLTTLLINTNQITDISPVADL------------------ANLTTFYCGNNPISDISAVLTKLSIFNCYTANVEDIS-LVNLKTLSLGSNNIHDISDILTALEYLSFSNNPVENPEVILTNLNTLWLYNAQIRNIDFTLPKLKSVYLYNNQISNISEVWANIEYLELNNNQITDITPVLTTLKTLKLNDQIITNREIPFQKNISIENKVMDNFGNIVTPNNISDNGTYNSPTLSWNLNETKD... 363
17 -24.900IDP95476 internalin [Listeria monocytogenes EGD-e] NP_465993 [Listeria monocytogenes EGD-e]  ali follow..  14  56.KNLNKDSVNDVQDDLDALTGLETSTITNDSMQLLRAMFNNVTDVSIMEFGAKLTEPDITTIPHLKTLFFADPPGRLTRNLLPNYQNYPEMDTITMSGNNLIGSIPDFTGMPALKQLYMSEMLITSELPNFNNIPLLITLDLSSNQLTTIPDFQNI------------------PNLTFLDLNANLLTNTPDFLPKLTDLNLRHNNLTNYTNLPSLESLNLDYNFLTELPSNVLDTIYVQSQNGELPDQTINQGDTCTIDLPIYFQME-----TNMLVSPEVTGEYIGISVIQLPTTVNEEGNTITVDTSALSPGEYKLDVSYNHNYATG................................................. 376
18 -24.900IDP91701 gene: SLIT3; slit homolog 3 protein precursor [Homo sapiens] NP_003053 [Homo sapiens]  ali follow..  15  44SVDCHGLGLRAVPRGIPR--NAERLDLDRNNITRITKDFAGLKNLRVLHLEDNQVSVIERAFQDLKQLERLRLNKNKLQVLPELLFQTPKLTRLDLSENQIQGIPRKARGITDVKNLQLDNNHISCIEDGFRALRDLEILTLNNNNISRILVTSFNHM----------------PKIRTLRLHSNHLYMAPVHLRGFNVADVQKKEYVCPAPHSEPNIVDCRGKGLMEIPNLPEGIVEIRLEQNSIKAIPAGAKKLKRIDISKNQISDIAPDLKSLTSLVLYGNKITEIAKGLVSLQLLLLNANKINCLRV-LQNLNLLSLYDNKLQTISKLFAPLQSIQTLHLAQNPFV............................. 440
19 -24.200IDP05656 hypothetical protein lmo0171 [Listeria monocytogenes EGD-e] lmo0171 [Listeria monocytogenes EGD-e]  ali follow..  9  69...EEAATTNSTEEENTPKNNLKSTSENSKTYAEL----VNLAKIIAKNISGTEDINAEVSEAELQTITNLVATNQNITSL-TGIEHLTALENINVNNNELTTIDS-LFNIPTLKSISANNNKITGNFSLVKTLP----------------------------------------ELHTLEVLGNAITELDENQPNLVTLSADELELKKLTL-----------KNLSQLNGLGRIASSISIDWGDLESVTMNLPEIISVDISGNYLDSDDIHLENVKNLDISSNELTRLPKINDLLTTINVRSNKIDRLESSVPKLATLNADKQAVTLS.................................................. 351
20 -23.500IDP02569 gene: inlE; internalin E [Listeria monocytogenes EGD-e] lmo0264 [Listeria monocytogenes EGD-e]  ali follow..  9  12VTLAVVLAITFW-VGMSSKEVQAAVIEHPTPINEIFT-DPVLTDNVKTLLGKADVTDE-VTQTDLDSVTHLSAKSAGITTI-EGLQYLTNLSELELIDNQVTDLNP-LTNLTKITELRLSGNPLKDV-SALAGLKNLKTMDLIYTDITDVTPLAGL------------------SNLQVLNLDINQITDITPLLSNLQFLSFGSTQVSDLT-LSKLTTLNAMNSKVSDVSPLLSNLTEVYLEENQISDVSPLLPNLSIVTLTNQTITNQPVFNKPIVPNVVTGLSGELIAPDPNLTWDLNSFINSVSYTFNQSVKNTTAPFSGTVTQPLT................................................. 340
21 -23.300IDP05423 gene: inlH; internalin H [Listeria monocytogenes EGD-e] lmo0263 [Listeria monocytogenes EGD-e]  ali follow..  13  4.................RWNSVFKLVLMVTAILGLSTTSQGVEVRAESITQPTAINVI-FPDPALANAIKIAAGKSNVTDTVT-QADLDGITTLSAFGTGVTTI-EGVQYLNNLIGLELKDNQITDL-TPLKNLT----------------------------------------KITELELSGNPLKNVSAILQSIKTLDLTSTQITDVT-LSNLQVLYLDLNQITNISPLLTNLQYLSIGNAQVSDLTPLLSKLTTLKADDNKISDISPLASNLIEVHLKNNQISDVSPLTSNLFIVTLTNQTITNQPVFNNLVVPNVVKGPSGAPIPATISDNGTYASPNLTWNLTSFI........................... 313
22 -22.800IDP05755 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo0732 [Listeria monocytogenes EGD-e]  ali follow..  12  2..........KKAFLCLSAIVLSLNFVWINPITSASKIETTKETNQQVNLKNNVTDVTSEDLGGQTWLNEVNRQLAPKTDVNLTFEDLAKITTISLNNRSLTG----------------------EVPPEIKNLV----------------------------------------SLQRLYLFSNKLSEIPAELGELT----------------KLTELRLDYNELSKIPDGLGNISEIALQNNRLVSLYENRTGKNEVNVSGNQVTNSQQSEPSVYSYPSSTPEYSHIKANNSFISNLTMNLTPFLKNSPTFINLQVVYMFNSELFD................................................... 261
23 -22.100IDP01916 hypothetical protein lmo0327 [Listeria monocytogenes EGD-e] lmo0327 [Listeria monocytogenes EGD-e]  ali follow..  11  2........LKKIFIALIALVVIINTVSFTSVSASTPTWLE-----QTMNNNEPFIKEIETETGKTR----------------------ANITQTDLEA-------------------ALRVTGASDIPANIDMLT----------------------------------------HLTLLKAVQGTISSVPNSVGNLK----------------ELKILNLNTNHLSNFPTIVYQLP-----------------KLEELQLNDGTIEEIPATISHLKFLTVNNNRLVKVPTIIFSTNWSNSSTGELDLFTTGNQIVTDI--PANYVSNFNNGQNMLEFYDGQFQKQDQLTTTPGYTIDVPVGTDFNQLTPDKTKLALT. 256
24 -21.300IDP91680 INLB_LISMO [Listeria monocytogenes]  ali follow..  9  4.KHNPRRKYCLI-SGLAIIFSLWIIIGNGAKVQAETITDDAFAETIKDNLKKKSVTDA-VTQNELNSIDQIIANNSDIKSV-QGIQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVKDL----SSLKDL-------------------------------------KKLKSLSLEHNGISDINGLLPQLESLYLGNNKITDIT-LTKLDTLSLEDNQISDIVPLLTKLQNLYLSKNHISDLRALLKNLDVLELFSQECLNKPSNLVVPNTVKNTDGSLVTPEIISDDYEKPNVKWHLPEFTNEVIFYQPVTIGKAKARFHGRVT-QPLKEVYTVSYDVDGTVIK-TKVEAGTRITAPKPPTKQGYVF.... 357
25 -21.200IDP05699 hypothetical protein lmo2396 [Listeria monocytogenes EGD-e] lmo2396 [Listeria monocytogenes EGD-e]  ali follow..  10  1........MYKLVKIILALFLITTVFLPFSNVKAAPTDVVNIPDPVL----NSGLKNI-IGNPFLDEITEANMATITVADL-SNMSGAPGYPVTGLIKDL-----TGLDKAVNMTKLYFSNQS------QIKNLDKIKNL----------------------------------PNLKKIVAVTTGLNNISALMPALEEVELGGDYITDFT-KENLTSFSYNSYAWSNPAYHQINNDEF----KNFTKL----KSLVKLDLTWNNITDLSPLNDHITNLNLNYNQFTNVAPIMKNLKVLYLNNNNLTSIDALLRGLTIAYADNNNITDLSNL-KNFFEAMVAQGDYEGLQIN........................... 295
26 -20.300IDP02719 gene: inlG; internalin G [Listeria monocytogenes EGD-e] lmo0262 [Listeria monocytogenes EGD-e]  ali follow..  14  1.....................................................................................................................................................................................MKQRKTSVLHVLVTAILGISLWVNASHGM---KAQAESIAQPAPINEI-PALADEVKTELGKTSVTDEVTQLNQITKLEADDKGINSIEQYLTNLNMLGVSSNQITNITPLLTNLDSLYLGDNKISDVTPLLTQLTFVQLSINQIKDV-TPLANLTKLNYLDLRENQISDA-SPLVNMTDLTVLHLEKQQITAA.... 201
27 -19.900IDP05426 hypothetical protein lmo0610 [Listeria monocytogenes EGD-e] lmo0610 [Listeria monocytogenes EGD-e]  ali follow..  13  9GLCILLIMPFTISF-SANVSAEENISIKAAQDVVNIPD-PALKSYLNGLLGQPSTSDITEA--QMDTITDVTISNASLTDL-TGLDYAHNLTILHLTNTGVTDYSL-VANIPSLTNLNISGSNLTT--NSIPDLNGL-------------------------------------TNVTNLNLSSGKLDN---------------SALTKFNKLPNLTFLNLDNNSITDFMPLLPNLASLFIQFCGVNDFRGIFPKLTNLAAFGQNVGSAILINSKSSALNYNEANQTIFVPFMTERSMNFDGYLFPFTTNTASSTLNGVQISGSRLS.................................................... 288
28 -19.700IDP01918 hypothetical protein lmo0514 [Listeria monocytogenes EGD-e] lmo0514 [Listeria monocytogenes EGD-e]  ali follow..  10  1MKKALKLFLATI-CMFIMIYPSTAAHAEETNIVNIPD--ANLKTYLNGLLKQASDAPITKT--QMNTIQTVTLSGSTYTDL-TGLEEAGNLVTLSLNNTNIQTLEP-IKNQTSLTYLTVGGDNVKDS--LFVDLNGL-------------------------------------VNLQSLSINGSEVTHN---------------VFKTFNKLPKLTYLYAQNSKITDISALLPALTTLFLQFDGIDDFRPLFESFKNGNLKALAAFGQNITLKSGKLDYNETNQTLYLPFSPKPLTSFDGTVAPFSKSTSA................................................................... 265
29 -19.200IDP05549 hypothetical protein lmo0549 [Listeria monocytogenes EGD-e] lmo0549 [Listeria monocytogenes EGD-e]  ali follow..  12  1...........MKFNWKVVLLFVLILAFIVPVYSKAV-ETGKEVPKSPELLDDKSSTL-KNVNTPKNLKASPLTIPANSTIADLF----------------------DEGMAKTIANQLGRTENN--------------------------------------------------NFQTPTKTDWKVDDVVTELNRMWYLTSVATSIEGIQYLPNLYDVRLQFDKFLKAPNGYSQLYRLNINNGNISDISPLAPTLNDIDLGGNNISDLSLFPKNLEEISLERNNISDVSPL-TKIKIFNLDENHITDLSSLMPNLQRLYVRYQTLDMEP................................................. 275
30 -18.700IDP01994 hypothetical protein lmo1290 [Listeria monocytogenes EGD-e] lmo1290 [Listeria monocytogenes EGD-e]  ali follow..  8  2..........SVKSNIVKIGVCFAVLAVPVSQTTLPVFAATFKAYLNGLLGQASTANITEA--QMDSLTYITLANINVTDL-TGIEYAHNIKDLTINNIHATNYNQ-ISGLSNLERLRIMGADVTS--DKIPNLSGL-------------------------------------TNLTLLDLSHSAHDDSINTLPKVTSIDLSYNDIMPLKTMPELKSLNIQFDGVHDYRGIFPKLNTLLAYSQTIGGKKLINSKSSKLTYNAENQTLYVPFSLMTERTVNYDGYVPDFVSTASSDTYFTMNEQQVNGNRLTITGLTVSDVSKTDFDNL.................................................. 309
31 -18.200IDP02661 hypothetical protein lmo1289 [Listeria monocytogenes EGD-e] lmo1289 [Listeria monocytogenes EGD-e]  ali follow..  11  1...........................................................................................................................MMSIKSNIMKIGVCSVMVLVPLSQTSLPSFAAEEIALKESQDVVNIPDPQLKKELNLYLNQAENADIEAQMATFRNITLNSGDLTGIEYLKNITTLSINNINASYEPQTLSSLEKLVINGENVNA--SVLSNLTFLDLSRTNIDDT-SNIPNLNKLDISNNKITKISELLPSLQELRVSDCQITNFKGIFPNLTAFYGDGQLFGIDSFETDGFKNIKSSELTFDANAKVPFSIVTVNTILNY.............. 262
32 -14.900IDP92552 gene: NOD2; nucleotide-binding oligomerization domain-containing protein 2 [Homo sapiens] NP_071445 [Homo sapiens]  ali follow..  10  773..SVGPTECAALAFVLQHLRRPVALQLDYNSVGDVEQLLPCLGVCKALYLRDNNISDLIECALHCEQLQKLALFNNKLTDMAKLLACRQNFLALRLGNNYITA------------------AGAQVLAEGLRGNTSLQFLGFWGNRVG--------------------------------DEGAQALAEALGDHQSLRWLSLVGNNIGSLAKNVMLEELCLEENHLQD-------------GVCSLAEGLKKNSSLKILKLSNNCITY-------------GAEALLQALERNDTILEVWLRGNTFSL-----EEVDKLGCRDTRLL.................................................... 1039
33 -12.200CPX_91662_05666 Complex of CADH1_HUMAN with INLA_LISMO [Undefined organism]  ali follow..  14  984TQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITP-LANLTNLTGLTLFNNQITDI-DPLKNLTNLNRLELSSNTISDI-SALSGLTSLQQLSF-GNQVTDLKP-LANLTTLERLDISSNKVSDI-SVLAKLTNLESLIATNNQISDITPL------------------GILTNLDELSLNGNQLKDI------------------TLASLTNLTDLDLANNQISNLAPLLTKLTELKLGANQISNISPLLTALTNLELNENQLEDISSNLKNLTYLTLYFNNISDISSSLTKLQRLFFYNNKVSDVSSLANNINWLSAGHNQISDLTPL-ANLTRITQLGLNDQAWTNAPVNYKANVSIPNTVKNVTGALIAPATI 1330
34 -10.300IDP91553 gene: ECs5048; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB38471 [Escherichia coli O157:H7 str. Sakai]  ali follow..  7  4..NGLNNMFFPLCLINDNHSSLSHTKKTKSDNYSKHHKNTLIDALSLFKMDDHEKDLIQKMKRIYDSLPSGKITKETDRKIHKYFIDIASYANNKCDDRITRRVYLNKDKEVSIKVVYFINNVTVHNNTIEIPQTVNGGYDFSHLSLKGIVIKDEDLSNSNFAGCRLQNAIFQDCNMYKTNFNFAIMEKILFDNCILDDSYFAQIKMTDGTL-VQFYNATMNRANIKNTFLDYSNFYMAYMAEVNLYKVIAPYINLFRADLSFSKLDLINFKHADLSRVNLNKAILQNINLIDSKLFFTRLTNTFLEMVICTDSNMANVNFNNANLNNCHFNCSVLTKAWMFNTRLYRVNFDEASVQ...................... 370
35 -9.520IDP01014 gene: pipB2; secreted effector protein STM2780 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  9  162..............................................................................................................................................................................ANLTSENLCDADLSGANLEGAVLFMADCEGANFKGANL-TSLGDSNFKNACLEDSIMCGATLDHANLTGANLQHASLLGCSMIECNCSGANMDHTNLSGATLIRADMSGATLQGATIMAAIMEGAVLTRANLRKASFISTNLDGADLAEANLNNTCFKDCTLTDLRTEDATMSTSTQTLFNEFYSENI................. 350
36 -9.100IDP91295 SopD-like protein STM0972 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  9  228..........................................................................................................................................................................................................................................QFFKIGYWELEGEVLFDMVHSYLLQAYKPSLSSDLIETNLFSDVLNKDYDDYQNNKRIDAILRRIYRSHNNTLFISEKSSCRNML............................................................ 318
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.