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Query: IDP91625 gene: ECs2073; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB35496 [Escherichia coli O157:H7 str. Sakai], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKFPSIFNKIKPQSIQQHPEKNQLNWMLELNKWKEERILTGEIHRPECRNEAAKRINCAFLSKQNDIDLSGLNLSTQPPGLQNFTSINLDNNQLTHFDATNYDRLVKLSLNSNTLESINIHQGRNVSITHISMNNNCLRNIDIDRLSSITYFSAAHNKLEFVQLESCEWLQYLNLSHNQLTDIVTGNKEELLLLDLSHNKLASLHNALFPNLNTLLINNNLLSEIKMFYSNFCKVQTLNAANNQLEKINLHFLTYLSSIKSLRLDNNKITRIDTENTSDIRSLFPIIKKSESLNFLNISGENNCPTIQLMLFNLFSPALKLNTGLAILSPGAFEDHSDGLDVDNELFHYTINKAYTPYNIHTYKTEEVVNQRNIKIKNMTLDEINNTYCNNDYYNEAIREEPIDFLDRSFSSSSWPFYHLast
1 -79.300IDP91625 gene: ECs2073; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB35496 [Escherichia coli O157:H7 str. Sakai]  ali  100  1MKFPSIFNKIKPQSIQQHPEKNQLNWMLELNKWKEERILTGEIHRPECRNEAAKRINCAFLSKQNDIDLSGLNLSTQPPGLQNFTSINLDNNQLTHFDATNYDRLVKLSLNSNTLESINIHQGRNVSITHISMNNNCLRNIDIDRLSSITYFSAAHNKLEFVQLESCEWLQYLNLSHNQLTDIVTGNKEELLLLDLSHNKLASLHNALFPNLNTLLINNNLLSEIKMFYSNFCKVQTLNAANNQLEKINLHFLTYLSSIKSLRLDNNKITRIDTENTSDIRSLFPIIKKSESLNFLNISGENNCPTIQLMLFNLFSPALKLNTGLAILSPGAFEDHSDGLDVDNELFHYTINKAYTPYNIHTYKTEEVVNQRNIKIKNMTLDEINNTYCNNDYYNEAIREEPIDFLDRSFSSSSWPFYH 419
2 -44.700IDP01745 hypothetical protein lmo2821 [Listeria monocytogenes EGD-e] lmo2821 [Listeria monocytogenes EGD-e]  ali follow..  17  3.TTKIVIASLVSLTMVSNPLLTFAATNDVIDN-TTEITTDKETSSTQPTIKNTLKAGQTNFASEVAAAFEMQATDTISEQLATLTSLDCHNSSITDMGIEKLTGLTKLICTSNNITTLDLS--QNTNLTYLACDSNKLTNLDVTPLTKLTYLNCDTNKLTKLDVSQNPLLTYLNCARNTLTEIDVSHNTQLTELDCHLNKITKLDVTPQTQLTTLDCSFNKITELD--VSQNKLLNRLNCDTNNITKLD---LNQNIQLTFLDCSSNKLTEIDVTPLTQLTYF---DCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAE-GCRKIKELDVTHNTQLYLLDCQAAGITELDLSKLVYLYLNNTELTELDVSHNTKLKSLSCVNAHIQDFSSVGKIPALNNNF...... 418
3 -44.500IDP02440 hypothetical protein lmo0331 [Listeria monocytogenes EGD-e] lmo0331 [Listeria monocytogenes EGD-e]  ali follow..  13  12..LSATVTSSLPIPMVKAESTTAN-----------EMKTENQLLKTDLKETPKEKTPNNNLKNQLVQAGTKTYNDYFPDNLAKEVAETMNKNADESVTVEELAKVTKLDARSQGIEDST-GIEYLTGLEVLNLEDNQLKSIDVSKNLNLKELTCSNNPLANLDVSKNLALEELTCENNELTQLDVSQNTALEYLYCPRNQLTKLDVSKNSALRYLACDVNQLTNLD--VSKNPALTNLGCTKNQLTDLD---VSQNPNLGTLVCSDNQLTNLDVSQNQALENL---ACDNNELKNIDINQALSLKELSCENNQLTNLDTT--QNLALEILYCDDNQLTDLDVRKNVNLLILFCNNNQLTNLAVG--------------------ETIAKVRCNNNQLKDVS.................. 369
4 -38.100IDP05663 hypothetical protein lmo0333 [Listeria monocytogenes EGD-e] lmo0333 [Listeria monocytogenes EGD-e]  ali follow..  15  371.NITADSCAIEDLGLNNLPKLQTLVLSDNELTNITAITDLPQLKTLTLDGCGITSIGLDNLPKLEKLDLKENQITSISEDLPRLSYLDVSVNNLTTIDLKKLPLLEWLNVSSNRLSDVS-TLTNFPSLNYINISNNVIRTVGMTELPSLKEFYAQNNSISDISIHDMPNLRKVDASNNLITNIGFDNLPKLQSLDVHSNRITSTSIHDLPSLETFNAQTNLITNIG-TMDNLPDLTYVNLSFNRIPSLA--PIGDLPNLETLIVSDNNSYLRSLGTMDGVPKLRILDLQNNYLNYTSLSDLTNLTELNLRNNVYIDDISGLSTLSRLIYLNLDSNKIEDISLSNLTNLQELTLENNKIENIS-----------------ALSDLENLNKLVVSKNKIIDIS--PVANMVNRGAIVTASN 783
5 -37.200IDP91619 gene: ECs2672; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB36095 [Escherichia coli O157:H7 str. Sakai]  ali follow..  13  2..FPLNDLSLKTQQLNKITSNTESTIKQHELVDDAIINELSSELVSCLGNDKFTPVDSNLLNMLSEFKLLREQCFRWGNYFENYGAYDKTGSITIEKSEGTLPIRHKLEFISTNIAELLDKLTKITDARLCKGFSDWASSVKEG--LHSNELNLSSLSLGSVP-PLPEWIEMLSLVYNELDSIQV--PESCKELELDFNNLTEFP-QVPDGITLISVNNNLISYID---SFPPKAKKIFICHNKLSEIP----ALPDTAKVFDCSENNIKEIR----WFPKNLKEAYIEYNKIEVIP-AIPGNLKLLCMKCNPIKEAFLMPWTLTGIRYEISQRKYIVMNDYDKYSDMVKKHVIDGEEFIIKYYM...................................................... 379
6 -36.600IDP05666 gene: inlA; internalin A [Listeria monocytogenes EGD-e] lmo0433 [Listeria monocytogenes EGD-e]  ali follow..  17  35.AATITQDTPINQTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDVEYLNNLTQINFSNNQLTDITPNLTKLVDILMNNNQIADIPLANLTNLTGLTLFNNQITDID-PLKNLTNLNRLELSSNTISDIALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDIVLAKLTNLESLIATNNQISDIPLGILTNLDELSLNGNQLKDIG-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI--SPLAGLTALTNLELNENQLEDIPISNLKNLTYLTLYFNNISDIS-PVSSLTKLQRLFFYNNKVSDVSLANLTNINWLSAGHNQISDLT-----------------PLANLTRITQLGLNDQAWTNAPV................. 422
7 -36.400IDP05656 hypothetical protein lmo0171 [Listeria monocytogenes EGD-e] lmo0171 [Listeria monocytogenes EGD-e]  ali follow..  15  68.SEEAATTNSTEEENTPKNNLKSTSENSKTYAELFPDVNLAKIKNISGTEDINAEVSEAELQTITNLVATNQNITSLTEHLTALENINVNNNELTTIDLFNIPTLKSISANNNKITGNFSLVKTLPELHTLEVLGNAITELDIENQPNLVTLSADELELKKLTLKNLSQLNGLGRIASSIS--------------IDWGDLESVTLMNLPEIISVDISGNYLDSDDIHLENLPAVKNLDISSNELTRLP--KINDFPLLTTINVRSNKIDRLESSKLVDVPKLATLNADKQAVTLSK.......................................................................................................................... 352
8 -36.300IDP00005 internalin, putative BA_0552 [Bacillus anthracis str. Ames]  ali follow..  14  318.KLYVSNNKITDFTIEQLNKLGTLGVGSNGLVNIEPISQMSGIVELNLEKNDIKDISLSKLTGLQSLNLEENYVSDVSSNLINLYELKLATNEIRDIPIQELGKRIKIDAQRQKVFLDEAYMNEEVKIPVYDVNGTALQNIDMKLRQYMNKHNFERKNVNTPDLLTVKALKITDGKKEGITDFSLEFMTNVEELTLQNVNMKNAEISSLRNLKSVDLSYNQIEDIK-PLHSLEDLEKLNVSDNGIKNVP--ELFKMQKLKTLDLSNNKLDNAALDGIHQLENLDALLVNNNEINNLDISKVSKLNKLEMMSNKVRDIS-PLASLKNLQWLNLSDNKIQDISLSSMLDLLSLKLAGNEIRDVR-PVIQLAQWITVDIKNQKIVQEIQIPIYDLEGEIFEDIELKSTDGIVTDRGTVVWKT 807
9 -36.100IDP91618 gene: ECs2674; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB36097 [Escherichia coli O157:H7 str. Sakai]  ali follow..  13  2..FPLNDLSLKTQQLNKITSNTESTIKQHELVDDAIINELSSELVSCLGNDKFTPVSCNLLNMLSEFKLLREQCFRWGNLFENYESYDKTGSITIEKNEGTLPIRHKLEFISTNIAELLDKLTKITDARLCKGFSDWASSVKEG--LHSNELDLSYLFLGSVP-PLPDWIEMLSLVYNELDSIQV--PESCKELELDFNNLTEFP-QVPDGITLISVNNNLISHID---SFPPKAKKIFISHNKLSETP----AIPDTAKVFDCGYNKIQEIR----YFPKNLKEARIGYNNIEVVP-AIPGNLKILFMECNPIKEAFLMPWTLTGICYEISQRKYIVTN............................................................................... 352
10 -33.000IDP05081 putative cell surface protein, internalin proteins [Listeria monocytogenes EGD-e] lmo2027 [Listeria monocytogenes EGD-e]  ali follow..  13  33.DLYPLPAPIIDVPDEGLAKDMAKNLNKDSVNDVIDQDDLDALTGLGFETETITNDSMQLLENIVSVMEFGEDLTEFPDTIPHLNTLFFNTPPEGVTDYQNYPEMVTITMSGSNLIGAIPDFTGMPDLSQLYMADMMITSDDFHTIPKLSTLDLSHNQLTNLPFQNLTNLAELNLSFNNLTNTMFTNLSNLNNLNLDYNHLNELP----SNVLNSIFIENQSGTVPDQIIKQGETCTIQLPNMLVNPTVLGSYSADIPVEVVTTTNADTESITLDTSELSPGVYNFNVQFNDAYPITGCVYDWVLTVN............................................................................................................... 367
11 -32.700IDP00034 internalin, putative BA_1346 [Bacillus anthracis str. Ames]  ali follow..  17  1..MFLNTNEILDYSLKYMPNLKSLTVANAKIKDPSFFANLKQLNHLALRGNEFSDVTLVKMDHLDSLDLSNNKITNVAPEMKNVKSLYLSGNQIEDVTLAKMEQLDYLNLANNKITNVA-PLSALKNVTYLTLAGNQIEDIKPLYSLPLTDLVLTRNKVKDLSIEQMKQLEELWIGKNEIKDVPLSKMTQLKQLHLPNNELKDIPLSSLVNLQKLDLEANYISDLTP-ASNLKKLVFLSFVANEIRDV--RPVIELSKTAYINVQNQKVFLE--ETEVNKEVKVPIYEKDGKISTKRLKGEGGTYSNDAVKWSTPGE...................................................................................................... 318
12 -32.400IDP95186 gene: lmo2445; lmo2445 [Listeria monocytogenes EGD-e] CAD00523 [Listeria monocytogenes EGD-e]  ali follow..  11  1................................MLFAPTIKAQADTVPLPAPIIEAFPVEAIAEAIAGELDKDSVNDTITTAIPLPSLGLTGEDLSVLNNEVFTNAIELAIWSNNIGELPDLSEALPALENIEANGANITVFPDANYPNLTNVDLSQNNFGFNKFVGMEGLVSINMENAGLSGYIWMNMPNLDSLILNENHLISIPIFLSQQLGTHSFANQTATYPPTTIKQGENLKVFVPFIYQALDF---IAPSNHDLIIIKDNGRTLYEPP.................................................................................................................................................. 253
13 -31.200IDP05076 hypothetical protein lmo0801 [Listeria monocytogenes EGD-e] lmo0801 [Listeria monocytogenes EGD-e]  ali follow..  14  5..............CTVILFLTLLLNGFVPNAHAKTESPSADNNLQVAPPAAIKAMANEVLKSLNLKKLNKKSTSDTVTELNSLTGFQAINKGIKSIEVEYLQNITELDVEKNQITDIA-PVANLKKLTTLLINTNQITDISVADLANLTTFYCGNNPISDISVQNLTKLSIFNCYTANVEDISVKNLVNLKTLSLGSNNIHDISIEKLTALEYLSFSNNPVENPEV-IGNLTNLNTLWLYNAQIRNIDF--TANLPKLKSVYLYNNQISNI--SEVSNWANIEYLELNNNQITDITVANLTTLKTLKLNDQIITNREIPFQKNISIENKVMDNFGNIV-NISDNGTYNSPTLSWNLNETKDTKITILNINATYSGTVIQPLTKDSTRPIITADGKVSYPEGTTKTTTEFLTDIHATTD 427
14 -30.900IDP05553 hypothetical protein lmo1136 [Listeria monocytogenes EGD-e] lmo1136 [Listeria monocytogenes EGD-e]  ali follow..  12  2..............KKTIKITTSLLLSFACVFSIGDFTKPHTVEAEIVYSLTNPKFTDPKLAQVVADWLKLPAATSSVTQLNTIKALHFDSKGVQSLEVEYLKNLTQVFGYGNQVSDLG-PLSNLTKLEVIQMPRNQISDLPIANLTALMSLDFEFNNLQTIEIKNLTNMLELNVSANPISDINVKNMTQLEFLTLRDCEVSDLPVENLSNMLMFWAGRNNISDITP-LKNMSKLLGLSLFGNQIKDVSV--IKNLTSLEDFDIKANQVSDI--SSLATSTTLETLTLSFNQIIDIPLKNLTNLTRLELENQTRALDAVEIDNPLILPAPVIDENGSRV-KVSHAGVYANGEITWEGLQSNY----ILNYEYALPVTIGSLTTTYSGKIT............................. 382
15 -30.400IDP05548 hypothetical protein lmo0409 [Listeria monocytogenes EGD-e] lmo0409 [Listeria monocytogenes EGD-e]  ali follow..  13  1..MKSKNNYFKQITIMTVVSLLIMVLGIQGNNDVKAAPQVAPPASIN------QIFPDADLAEGIRAELQKSSVTDVVTELESISQLSVYAKKIASIELEYLTNLKFLNLNGNQITDLS-PLSNLTKLTEIYIGDNKISDISLQNLTNVTDLYLVDNDISDLRLANLTQMYSLRLGGNSNIS-PVRNMTRLNNLEVTGSILKDLTLADVTSLTRLTLSDNQIEDLSP-LAGLTKLDNIAAYSNKITDITP--VTNLTRLQYLDLGSNEITDL--SPVANLQKLTSLHLANNQITNISLEDLTNLTSLGLQNNKISDIS-VLKNLTHVTYLQLGYNQIVDVKIGGLTNLTSLQLTQNHITDIS-----------------PLANLTKIQYSDFSNQMITNLE.................. 380
16 -30.100IDP02569 gene: inlE; internalin E [Listeria monocytogenes EGD-e] lmo0264 [Listeria monocytogenes EGD-e]  ali follow..  16  3.............RNKTALRILVTLAVVLAITFWVGMSSKEVQAAVIEHPTPINEITDPVLTDNVKTLLGKADVTDEVTDLDSVTHLSAKSAGITTIELQYLTNLSELELIDNQVTDLN-PLTNLTKITELRLSGNPLKDVSLAGLKNLKTMDLIYTDITDVTLAGLSNLQVLNLDINQITDIPLAGLSNLQFLSFGSTQVSDLPLANLSKLTTLNAMNSKVSDVSP-LTGLSNLTEVYLEENQISDVSP--LAKLPNLSIVTLTNQTITNQPV--FYQNKPIVPNVVTGLSGELIAPDTISDNGTYT............................................................................................................... 299
17 -29.400IDP05423 gene: inlH; internalin H [Listeria monocytogenes EGD-e] lmo0263 [Listeria monocytogenes EGD-e]  ali follow..  16  10.KLVLMVTAILGLSSQGVEVRAESITQPTAINVIFPDPALANAIKIAAGKSNVTDTTQADLDGITTLSAFGTGVTTIVQYLNNLIGLELKDNQITDLTLKNLTKITELELSGNPLKNVS-AIAGLQSIKTLDLTSTQITDVTLAGLSNLQVLYLDLNQITNISLAGLTNLQYLSIGNAQVSDLTLANLSKLTTLKADDNKISDISLASLPNLIEVHLKNNQISDVSP-LANTSNLFIVTLTNQTITNQPV--FYQNNLVVPNVVKGPSGAPIAPATISDNGTYASPNLTWNLTSFIN.......................................................................................................................... 314
18 -28.800IDP05561 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo2026 [Listeria monocytogenes EGD-e]  ali follow..  14  2.....................................................................................................KKKFVYLLLLVLFMTVLPFQMLEAQAASTSWIEQE-----GNEPFIAETEKILSKNRQD-ITLADLETIQKIHV--FGADSIPISDYKNLTALEANYGTITEVPVGSLKELVTLNVDENNLQEFPMVIFQLPKLEVLYISRGNITEIPTEITTLASHLKVLDVSNQKLVTIP-DSILTTNWKAMHDGKLGSLAGNQIASDIPANYLDNFNSGGNMLE..................................................................................................... 216
19 -28.600IDP05426 hypothetical protein lmo0610 [Listeria monocytogenes EGD-e] lmo0610 [Listeria monocytogenes EGD-e]  ali follow..  12  8IGLCILLIMPFTISSANVSAEENISIKAAQDVVNIPDPALKSYLNGLLGQPSTSDITEAQMDTITDVTISNASLTDLLDYAHNLTILHLTNTGVTDYSVANIPSLTNLNISGSNLTTNSIPLNGLTNVTNLNLSSGKLDNSAFNKLPNLTFLNLDNNSITDFPLKSLPNLASLFIQFCGVNDFRIDSFPKLTNLAAFGQNVGSAIINSTIKSSALNYNEANQTIFVP-FTLMTERSMNFDGYLFPFTTNTASSSTYFTLNGVQISGSRLS..................................................................................................................................................... 288
20 -28.400IDP91680 INLB_LISMO [Listeria monocytogenes]  ali follow..  15  1....................MKEKHNPRRKYCLISGLAIIFSLWIIIGNGAKVQAETITVPTPIKQIF---------DDAFAETIKDNLKKKSVTDATQNELNSIDQIIANNSDIKSVQ-GIQYLPNVTKLFLNGNKLTDIPLANLKNLGWLFLDENKVKDLSLKDLKKLKSLSLEHNGISDIGLVHLPQLESLYLGNNKITDITLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQSNLVVPNTVKNTDGSLVTPEISDDGDYEKPNVKWHLPEFTN..................................................................................................... 292
21 -27.800IDP95476 internalin [Listeria monocytogenes EGD-e] NP_465993 [Listeria monocytogenes EGD-e]  ali follow..  12  33.DLYPLPAPIIDVPDDGLAKDMAKNLNKDSVNDVIDQDDLDALTGLGFETSTITNDSMNNVTDVSIMEFGAKLTETTIPHLKTLFFADPPGRLTRNLNYQNYPEMDTITMSGNNLIGSIPDFTGMPALKQLYMSEMLITSDNFNNIPLLITLDLSSNQLTTIPFQNIPNLTFLDLNANLLTNTPFQNLPKLTDLNLRHNNLTGTNYTNLPSLESLNLDYNFLTELPSNVLDTIYVQSQNGENMLVSPEVTGEYIGISVIQLPTTVNEEGNTITVDTSALSPGEYKLDVSYNHNYATGGVCSYDWNVT................................................................................................................ 386
22 -26.800IDP05699 hypothetical protein lmo2396 [Listeria monocytogenes EGD-e] lmo2396 [Listeria monocytogenes EGD-e]  ali follow..  14  2......YKLVKI--ILALFLITTVFLPFSNVKAAPTDVVN--IPDPVLNSGLKNIIGNPFLDEITEANMATITVADL-SNMSGAPGYP-VTGLIKDLTLDKAVNMTKLYFSNSQIKNLD-KIKNLPNLKKIVAVTTGLNNISLGEMPALEEVELGGDYITDFTLLEKENLTSFSYNSYAWSNPAFTKLKSLVKLDLTWNNITDLPLTENDHITNLNLNYNQFTNVA-PIATMKNLKVLYLNNNNLTSI--DALNTLRGLTIAYADNNNITDL--SNLKNFFEAMVAQGDYEGLQINN.......................................................................................................................... 296
23 -26.600IDP91701 gene: SLIT3; slit homolog 3 protein precursor [Homo sapiens] NP_003053 [Homo sapiens]  ali follow..  13  45..VDCHGLGLRAVPRGIPRNAERLDLDRNNITRKMDFAGLKNLRVLHLEDNQVSVIEFQDLKQLERLRLNKNKLQVLPQSTPKLTRLDLSENQIQGIPFRGITDVKNLQLDNNHISCIEDGAFRLRDLEILTLNNNNISRILFNHMPKIRTLRLHSNHLQFTLCMAPVHLRGVDCRGKGLMEIPANLPEGIVEIRLEQNSIKAIPAGAFTQLKRIDISKNQISDIPDAFQGLKSLTSLVLYGNKITEIAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISFAPLQSIQTLHLAQNPFMDLVCPEKCRCEGTIVDCSNQKLVRIPSHLPEYVTDLRLNDNEVSVLELRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSN 615
24 -26.600IDP01918 hypothetical protein lmo0514 [Listeria monocytogenes EGD-e] lmo0514 [Listeria monocytogenes EGD-e]  ali follow..  11  16..............................................................................IMIYPSTAAHAEETNIVNIPDANLKTYLNGLLKQASDAPITKT--QMNTIQTVTLSGSTYTDLTLEEAGNLVTLSLNNTNIQTLPIKNQTSLTYLTVGGDNVKDSDLNGLVNLQSLSINGSEVTHNVFKTFNKLPKLT-NSMKITDISA-LASLPALTTLFLQFDGIDDF--RPLNDFESFKNGNLKALAAFGQNTGRTNPRITLKSGKLETNQTLYLPSMMPKPLTSFDGTVAPFSKS...................................................................................................... 262
25 -25.600IDP01994 hypothetical protein lmo1290 [Listeria monocytogenes EGD-e] lmo1290 [Listeria monocytogenes EGD-e]  ali follow..  14  1..............................MSVKSNIVKIGVCFAVLAVPVSQTTLPFAAEQPGLKASQDNVNIPD--STFKAYLNGLLGQASTANITEAQMDSLTYITLANINVTDLT-GIEYAHNIKDLTINNIHATNYQISGLSNLERLRIMGADVTSDNLSGLTNLTLLDLSHSAHDDSILTTLPKVTSIDLSYNAITDIPLKTMPELKSLNIQFDGVHDYRG-IEDFPKLNTLLAYSQTIGGKKL--INSDIKSSKLTYNAENQTLY--VPFSLMTERTVNY--DGYVPDFVKSTASSDTYFTMNEQQVNGNRL.................................................................................................... 289
26 -25.600IDP02719 gene: inlG; internalin G [Listeria monocytogenes EGD-e] lmo0262 [Listeria monocytogenes EGD-e]  ali follow..  13  1........................................................................................MKQRKTSVLHLLVVTAILGISLWVNASHGMK-------AQAESIAQPAPINEITDPALADEVKTELGKTSVTDETQTDLNQITKLEADDKGINSIEIQYLTNLNMLGVSSNQITNITLANLTNLDSLYLGDNKISDVTP-LSGLTQLTFVQLSINQIKDV--TPLANLTKLNYLDLRENQISDA--SPLVNMTDLTVLHLEKQQITAAPV......................................................................................................................... 203
27 -24.900IDP02661 hypothetical protein lmo1289 [Listeria monocytogenes EGD-e] lmo1289 [Listeria monocytogenes EGD-e]  ali follow..  15  2......................................MSIKSNIMKIGVCSVMVLVPLSQTSLPSFAAEEIALKESDPQLKKELNLYLNQAENADITEAQMATFRNITLNSG-IKDLT-GIEYLKNITTLSINNINASYEPIQTLSSLEKLVINGENVNA-DLSVLSNLTFLDLSRTNIDDTKISNIPNLNKLDISNNKITKISLNNLPSLQELRVSDCQITNFKG-IEKFPNLTAFYGDGQLFG-IDSFETDGFKNIKSSELTFDANAKFSIVTVNTILNYDGLSLPYNTNPDY........................................................................................................................... 275
28 -22.900IDP01916 hypothetical protein lmo0327 [Listeria monocytogenes EGD-e] lmo0327 [Listeria monocytogenes EGD-e]  ali follow..  15  2.............................................................................................LKKIALIALVVIINTVSFTSVSASTPTWLE-----QTMNNNEPFIKEIE-------TETGKTRANITQTDLEAITAL-----RVTGASDINIDMLTHLTLLKAVQGTISSVPVGNLKELKILNLNTNHLSNFPTIVYQLPKLEELQLNDGTIEEIPATITNMASHLKFLTVNNNRLVKVPTISNSSTGELDLFTTGNQIVTDIPANYVSNFN.................................................................................................................. 208
29 -22.700IDP05549 hypothetical protein lmo0549 [Listeria monocytogenes EGD-e] lmo0549 [Listeria monocytogenes EGD-e]  ali follow..  11  1................................MKFNWKVVLLFVLILAFIVPVYSKVETGKEVPKSPELLDDKSSTLKNNLKASPLTIPANSTIADLPDEGMAKTIANQLGRTENN----------NFQTPTKTDWKVDDVTEVELNRMWYLTSV-ATIGSIEIQYLPNLYDVRLQFDQCKDLSPNGYSQLYRLNINNGNISDIS--SAPTLNDIDLGGNNISDFPKLPNKFPNLEEISLERNNISDVSPLAKFASTKIKIFNLDENHITDLSSLTNNKMPNLQRLYVRYQTLDMEPVVTSSKY................................................................................................................... 282
30 -22.400IDP05755 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo0732 [Listeria monocytogenes EGD-e]  ali follow..  17  2........................................................................KKAFLCLSAIVLSLNFVWINPITG-IETTKETNQQVNLKNNVTDVTSEDLGGQTWLNEVNRQLAPKTNLTFEDLAKITTISLNNRSLTG-EIKNLVSLQRLYLFSNKLSG-ELGELTKLTELRLDYNELSGKIPDGLGNISEIALQNNRLVQIPLSLENRTGKNEVNVSGNQVTINSQQSEPSVYSAYTYPSSTPEYSGHIKANNSFISNLTNDMNLTP................................................................................................................................ 238
31 -18.700IDP91566 gene: ECs1568; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB34991 [Escherichia coli O157:H7 str. Sakai]  ali follow..  9  4.......TSQLRPTGTFCSYSAETSADIKSEITPIQIEEARASGRLYIKDCDIEYLP-QLPNEITSVTIENNNLTTLTGLPVNTQNLSVINCEKLQIT----STVKNLHIELTDSPFIHF-----EGIECLTVCHCYISGVP-ESVRYLEIKGSATDSIKNVP-NGLSSLSINSYNPENQARIDNLISPSLKTLSLTGCSNIILPEKLPESVTSVTIHAEQKTTWNIGVEGMPDGLDLDLQN................................................................................................................................................................................. 232
32 -18.600IDP92552 gene: NOD2; nucleotide-binding oligomerization domain-containing protein 2 [Homo sapiens] NP_071445 [Homo sapiens]  ali follow..  16  750............................QEERLARKAARGLNVGHLKLTFCSVGPTECAALRRPVALQLDYNSVGDLLPCLGVCKALYLRDNNISDRGICKLEQLQKLALFNNKLTDMAKLLACRQNFLALRLGNNYITAAGAQVLAEG--------------LRGNTSLQFLGFWGNRVGD--LGDHQSLRWLSLVGNNIGSVGAQALVMLEELCLEENHLQDLAEGLKKNSSLKILKLSNNCITY--LQALERNDTILEVWLRGNTFSLEEVDKLGC............................................................................................................................................ 1033
33 -15.700CPX_91662_05666 Complex of CADH1_HUMAN with INLA_LISMO [Undefined organism]  ali follow..  18  989.....SNNQLTDITPLKNLTKLVDILNNNQIADITPLANLTNLTGLTLFNNQITDIDLKNLTNLNRLELSSNTISDISSGLTSLQQLSF-GNQVTDLPLANLTTLERLDISSNKVSDISV-LAKLTNLESLIATNNQISDIPLGILTNLDELSLNGNQLKDITLASLTNLTDLDLANNQISNLPLSGLTKLTELKLGANQISNIPLAGLTALTNLELNENQLEDISP-ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVS--DVSSLANLTNINWLSAGHNQISDLPLANLTRITQLGLNDQAWTNAPVNYKANVSI............................................................................................ 1313
34 -12.900IDP05226 putative membrane associated lipoprotein [Listeria monocytogenes EGD-e] lmo0460 [Listeria monocytogenes EGD-e]  ali follow..  10  162....LESVRIERSNLSRVTSFALAFYSSGIEKVIITAPSLLTTEGMFKNCSNLMEVDLSGLDTSA------TTMWDMFNSCRALEELD-----VSHFDTSSVTNMSYMFYDNRNLEVLDVSNLDTSSVTNMYLEELDVSHFDTSSVTDMYRVFNGCEKLKKLDVSSATAMVQMFRNCSALEKLDVSNVTDMRAMFAGCTSLEALDVSNF--------DTSSVTNMAAMFSDNEKVEKLDLST---------DTSSVTNMGTMFKNCTALKSLYLDNFTHAASSTDMFTGTTSLSYLNVSNFNGLENT................................................................................................................ 466
35 -10.500IDP04356 hypothetical protein [Yersinia pestis CO92] YPO0509 [Yersinia pestis CO92]  ali follow..  9  226.NVTFLGTDFSGMTLDNFRYCMFTGCHFDKATFKDCTFEHCQFTQSDFENSRWNNVHLSG-CLFKQAEWQKAAFTHCKWEKSTFEYGVFKHAQFTDNALDNC-LINHSDFSLGTFDHCTLNGCSETHCDQTQFNQVIITSCIFEK-CDGPKACFTESTIEKTSFIS-SSWVGGRLSHCYLNSLTTGLNTNLSESHFEQCSLNKMGFLK-VNLQSSTFINCSMLESCCDKADFSQLIACDMTAVRLKDANLVH----SHWQNTSLQQSMFYNADLRD----ATFQRCNLAGANLAMISQNMDTRFEHCLTEKTHWIPRRYT................................................................................................... 537
36 -9.010IDP91554 gene: ECs5021; hypothetical protein [Escherichia coli O157:H7 str. Sakai] BAB38444 [Escherichia coli O157:H7 str. Sakai]  ali follow..  11  3........................................GHISKFDGNNSLIKHGVVQG-NNIVDFDLLRNFNGGP-ENFIYISNIFLNIKQRNEKNHSI-NMFREVSISGDIVSVKFYRNEKIECACDFMMAKDAQGYIDLSE-LDLTSCHFKGDVISKVSFIS-SNLQHVTFECKEIGDCNFTT-AIVDNVIFKCRRLHNVIFIK-ASGDYVDFSKNILDTVDFS----SQLTHSNFCECQIRNSNFDH----CYLYASHFTRAEFLTDKEISFIK-SNLTAVMFDHVRISTGNFKD....................................................................................................................... 251
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.