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Query: IDP91702 gene: EZR; ezrin [Homo sapiens] NP_003370 [Homo sapiens], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MPKPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTIGLREVWYFGLHYVDNKGFPTWLKLDKKVSAQEVRKENPLQFKFRAKFYPEDVAEELIQDITQKLFFLQVKEGILSDEIYCPPETAVLLGSYAVQAKFGDYNKEVHKSGYLSSERLIPQRVMDQHKLTRDQWEDRIQVWHAEHRGMLKDNAMLEYLKIAQDLEMYGINYFEIKNKKGTDLWLGVDALGLNIYEKDDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKAPDFVFYAPRLRINKRILQLCMGNHELYMRRRKPDTIEVQQMKAQAREEKHQKQLERQQLETEKKRRETVEREKEQMMREKEELMLRLQDYEEKTKKAERELSEQIQRALQLEEERKRAQEEAERLEADRMAALRAKEELERQAVDQIKSQEQLAAELAEYTAKIALLEEARRRKEDEVEEWQHRAKEAQDDLVKTKEELHLVMTAPPPPPPPVYEPVSYHVQESLQDEGAEPTGYSAELSSEGIRDDRNEEKRITEAEKNERVQRQLLTLSSELSQARDENKRTHNDIIHNENMRQGRDKYKTLRQIRQGNTKQRIDEFEALLast
1 -130.000IDP91702 gene: EZR; ezrin [Homo sapiens] NP_003370 [Homo sapiens]  ali  100  1MPKPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTIGLREVWYFGLHYVDNKGFPTWLKLDKKVSAQEVRKENPLQFKFRAKFYPEDVAEELIQDITQKLFFLQVKEGILSDEIYCPPETAVLLGSYAVQAKFGDYNKEVHKSGYLSSERLIPQRVMDQHKLTRDQWEDRIQVWHAEHRGMLKDNAMLEYLKIAQDLEMYGINYFEIKNKKGTDLWLGVDALGLNIYEKDDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKAPDFVFYAPRLRINKRILQLCMGNHELYMRRRKPDTIEVQQMKAQAREEKHQKQLERQQLETEKKRRETVEREKEQMMREKEELMLRLQDYEEKTKKAERELSEQIQRALQLEEERKRAQEEAERLEADRMAALRAKEELERQAVDQIKSQEQLAAELAEYTAKIALLEEARRRKEDEVEEWQHRAKEAQDDLVKTKEELHLVMTAPPPPPPPVYEPVSYHVQESLQDEGAEPTGYSAELSSEGIRDDRNEEKRITEAEKNERVQRQLLTLSSELSQARDENKRTHNDIIHNENMRQGRDKYKTLRQIRQGNTKQRIDEFEAL 586
2 -125.000CPX_91702_91677 Complex of EZRI_HUMAN with M1_I34A1 [Undefined organism]  ali follow..  100  1MPKPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTIGLREVWYFGLHYVDNKGFPTWLKLDKKVSAQEVRKENPLQFKFRAKFYPEDVAEELIQDITQKLFFLQVKEGILSDEIYCPPETAVLLGSYAVQAKFGDYNKEVHKSGYLSSERLIPQRVMDQHKLTRDQWEDRIQVWHAEHRGMLKDNAMLEYLKIAQDLEMYGINYFEIKNKKGTDLWLGVDALGLNIYEKDDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKAPDFVFYAPRLRINKRILQLCMGNHELYMRRRKPDTIEVQQMKAQAREEKHQKQLERQQLETEKKRRETVEREKEQMMREKEELMLRLQDYEEKTKKAERELSEQIQRALQLEEERKRAQEEAERLEADRMAALRAKEELERQAVDQIKSQEQLAAELAEYTAKIALLEEARRRKEDEVEEWQHRAKEAQDDLVKTKEELHLVMTAPPPPPPPVYEPVSYHVQESLQDEGAEPTGYSAELSSEGIRDDRNEEKRITEAEKNERVQRQLLTLSSELSQARDENKRTHNDIIHNENMRQGRDKYKTLRQIRQGNTKQRIDEFEAL 586
3 -7.930IDP92687 Ser-Asp rich fibrinogen/bone sialoprotein-binding protein SdrE [Staphylococcus aureus subsp. aureus str. Newman] YP_001331559 [Staphylococcus aureus subsp. aureus str. Newman]  ali follow..  1.................................................................................................................................................................................................................................MINRDNKKAITKKGM-------ISNRLNKFSIR-----------------------KYTVGTASIL----------------VGTTLIF-GLGNQEAKAAENTSTENAKQDDATTSDNKEVVSETENNSTTENNSTNPIKKETNTDSQPEAKKESTSSSTQKQQNNVTATTETKPQNIEKENVKPSTDKTATEDTSVILEEKKAPNNTNNDVTTKPSTSEPSTSEIQTKPTTPQESTNIENSQPQPTPSKVDNQVTDATNPKEPVNVSKEELKNNPEKLKELVRNDSNTDHSTKPVATAPTSVAPKRVNAKMRFAVAQPAAVASNNVNDLIKVTKQTIKVGDGKDNVAAAHDG........ 306
4 -7.370IDP92699 Ser-Asp rich fibrinogen/bone sialoprotein-binding protein SdrE [Staphylococcus aureus subsp. aureus USA300_TCH1516] YP_001574462 [Staphylococcus aureus subsp. aureus USA300_TCH1516]  ali follow..  1.................................................................................................................................................................................................................................MINRDNKKAITKKGM-------ISNRLNKFSIR-----------------------KYTVGTASIL----------------VGTTL-IFGLGNQEAKAAENTSTENAKQDDATTSDNKEVVSETENNSTTENNSTNPIKKETNTDSQPEAKKESTSSSTQKQQNNVTATTETKPQNIEKENVKPSTDKTATEDTSVILEEKKAPNNTNNDVTTKPSTSEPSTSEIQTKPTTPQESTNIENSQPQPTPSKVDNQVTDATNPKEPVNVSKEELKNNPEKLKELVRNDSNTDHSTKPVATAPTSVAPKRVNAKMRFAVAQPAAVASNNVNDLIKVTKQTIKVGDGKDNVAAAHDG........ 306
5 -6.350IDP90430 gene: pmpD; Putative Outer Membrane Protein D [Chlamydia trachomatis D/UW-3/CX] CT_812 [Chlamydia trachomatis D/UW-3/CX]  ali follow..  1194.......TLVISWNPTGYRLDPQKAGALVFNALWEEGAVLSA-----RMEFDYSTNVWFGGFRTLSAENLVAIDGYKGALGVSGLGKMDSQKFDAEVSRKGVVGSVYTGFLAGSWFFKGQYSLGETQNDMKTRYASWTSRGVLADALVEYRSLVGPVRPTFYALHFNPYVEVSYASMKFPGFTEQGREARSFEDATNITILGMKFELAFIKGQFSEVLGISYAW--AYRKVEGGAVQLLFDW-EGAPMDLPRQELRVALENNTEWSSYFST-------------VLGLTAFCGGFTSTDSKLGYEANTGLRLIF................................................................................................................................................................................................................................................................................ 1531
6 -6.070IDP91521 C2 domain-containing protein [Toxoplasma gondii ME49] TGME49_040910 [Toxoplasma gondii ME49]  ali follow..  1716..........................................................................................................................................................................................................................................................................................................................TRVTPAPEPKAKPGLSMGAALLAVRARSRLQRKHLAQQLSSSSSSEVSASSASSLSPSSSSSSDFAETRAKADALRARLQAAQARLAAARETEVSSSETESSETSEASFLSSDGEWDALWQSQRAAAMERQQRLQKMVSGVKAAYRRLEEENTRLAATRRRDDKLQRQVEAERERAVELLKEATRRAKEEKDLIARQPPPARDWSDTVVLSTPQIFVNSQAACAPFADSGRDEGGRDEWYEVSDACSRRAESSNESRTTAGAKLRQQQLD.. 1985
7 -5.800IDP90997 gene: ompX; outer membrane protein X [Yersinia pestis KIM 10] y1682 [Yersinia pestis KIM10+]  ali follow..  1.......................................................................................................MVMKKIACLSAVAACVLAVTAGSAFAAQSDYQGVANKSSGFNLKYRYEWSDSQLGYITSFTHTEKSGFGDEAVYNKAQYNAITGGPAY-RINDWASIYGVGHGRFTSTSDYGFTYGA---GL--FNPAENVALDVSYEQSRIRNVDVGTWVAGV--------GYTF............................................................................................................................................................................................................................................................................................................................. 176
8 -5.580IDP90383 gene: pmpA; Putative outer membrane protein A [Chlamydia trachomatis D/UW-3/CX] CT_412 [Chlamydia trachomatis D/UW-3/CX]  ali follow..  671.........RAVPNSLSTFLLLQTASHNLGDHLCNNRSLIPTSYFGV----------LIGGTGAEMSTHSSEEESFISRLSGGGFGDSFVADLPEHITSEGIVQNVGLTHVWGPLTVNSTLCAALDHNAMVRICGKWDTFGMRGTL-QTMRVFSFANIEATNILQRAFTET---------GYNPRSFSKTKLLNIA-IPI-GIGYEFCLGNSSFALLGSIGYS---IKRENPSTLAHLAMAW-TTNGCSVPTSAHTLANQLILRYKACSLY------------------ITAYTINREGKNLSNSLSCGGYVGF................................................................................................................................................................................................................................................................................ 975
9 -5.560IDP05690 peptidoglycan linked protein (LPXTG) [Listeria monocytogenes EGD-e] lmo1666 [Listeria monocytogenes EGD-e]  ali follow..  13  1...............................................................................MKSKFF-----------MT---FLLS---------LIC-------LTGMKAEAKVGDISPDDISPE-ISDNRF---QSAEGKVLPNFEVDMSISD---QNNGKLSIDEDFE-LTSDGDIILIGIQGTPILNENG---QLN---QGIIVDRTTKKVE------WARV--VNYEDKWFITTNSSKSTEVVNYYGDSGGGSTLIVKS-IDANGNFQIAHKSDIQMEGNTLTMSASARYAAQGKQFIRYTLEPASLSITKNEFNPLDNTFWAKYQRTDVLKVDNKGLMAYNADVNGANQLKMSIRESENNYKEITLFDSVPEILANSSP...................................................................................................................................................................................... 328
10 -5.510IDP90331 gene: pmpI; Putative Outer Membrane Protein I [Chlamydia trachomatis D/UW-3/CX] CT_874 [Chlamydia trachomatis D/UW-3/CX]  ali follow..  631...................WHHRSLGYLF------STHSLDDHSFCLAA--------------------------------GQLLGKS-SDSFITSTETTSYIATVQAQLATPLMKISAQACYNESIHELKTKYGSWHSVAVSGEVCASIPIVSNGSGLFSSFSI-----KLQGFSGTQDGFEESSGEIRSFSASSNISLMGITFEKKSQKTRNYYYFLGAYIQ--LKRDVESGPVVNAVSW-DAPMANLDSRAYMFRLTNQRA--------------------LHRLQTL----VLRGQSHSYSLDLGTTYRF................................................................................................................................................................................................................................................................................ 878

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Sasin JM, Godzik A, Bujnicki JM. SURF'S UP! - protein classification by surface comparisons. J Biosci. 2007 Jan;32(1):97-100.