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Query: IDP91738 Q5YB85_STRSG [Streptococcus sp. `group G`], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst RKLKKGTASVAVALTVLGAGLASHTEVKAAENTYDRWKAQTEEARTDKLIAGFANLDADVTNLGKMMDELQKLKDFSKQNNSIGEYARYLQKLNDQFQEYYEQVVGDDSRRVLAKELAKNTELNEKLSELSTTSQALAKELQEQKENYDLVKTVHADTVKKHQKLVDEITKKLGEEETERHSLQEELNKAQQELAQKQQELKDKQADYDLVVETHAYTVKEHQKLVDEITKKLGEEETERHSLQEELNKAQQELAQKQQELEAEKLAKEGIVDSLTAYVTEKEAEVKKLTDSLAAKDAEIQEKEAEKDRQQHMYEAFMSQLKEKVEKQEQELAKLKQLETINNNLLGNAKDMIAKLSAKNEQLASDKAKLEEQNKISDASRKGLRRDLNASREAKKQLEAEHQKLEEQNKISEASRKGLRRDLDASREAKKQVEKDLANLTAELDKVKEDKQISDASRKGLRRDLDASREAKKQVEKALEEANSKLAALEKLNKELEESKKLTEKEKAELQAKLEAEAKALKEKLAKQAEELAKLRAGKASDSQTPEATPGNKVVPGKGQASQAGTKPNQNKEPMKETKRQLPSTGEATNPFFTAAALLast
1 -89.900IDP91738 Q5YB85_STRSG [Streptococcus sp. `group G`]  ali  100  1RKLKKGTASVAVALTVLGAGLASHTEVKAAENTYDRWKAQTEEARTDKLIAGFANLDADVTNLGKMMDELQKLKDFSKQNNSIGEYARYLQKLNDQFQEYYEQVVGDDSRRVLAKELAKNTELNEKLSELSTTSQALAKELQEQKENYDLVKTVHADTVKKHQKLVDEITKKLGEEETERHSLQEELNKAQQELAQKQQELKDKQADYDLVVETHAYTVKEHQKLVDEITKKLGEEETERHSLQEELNKAQQELAQKQQELEAEKLAKEGIVDSLTAYVTEKEAEVKKLTDSLAAKDAEIQEKEAEKDRQQHMYEAFMSQLKEKVEKQEQELAKLKQLETINNNLLGNAKDMIAKLSAKNEQLASDKAKLEEQNKISDASRKGLRRDLNASREAKKQLEAEHQKLEEQNKISEASRKGLRRDLDASREAKKQVEKDLANLTAELDKVKEDKQISDASRKGLRRDLDASREAKKQVEKALEEANSKLAALEKLNKELEESKKLTEKEKAELQAKLEAEAKALKEKLAKQAEELAKLRAGKASDSQTPEATPGNKVVPGKGQASQAGTKPNQNKEPMKETKRQLPSTGEATNPFFTAAAL 598
2 -22.900IDP91521 C2 domain-containing protein [Toxoplasma gondii ME49] TGME49_040910 [Toxoplasma gondii ME49]  ali follow..  9 1408........................FQARYAEKRIVFAVGPPMDDATEADAVSSVALMEKLR---DILPSMAHEEGRFQEVTGGGATLQWDGPGTNILDRIAQEQATAGEGEQQTSEGIPTRDMQVDGTAVLEEAGEKSDKKKKKKEKKEKKEKKEKKEKKEKKEKKKKKGGETAAEPEEASAVLAPPPVPVPAAAIPSVLLPADSEDGEKEQPKEKKKEKKEKKKKKDGETDAEPEEASAVLAPPPVPVPAAAIPSILLPTDGEDGEKEKTKEKKTEKKKEKHTEKKHKKKSEALPESETTAVVTVTPGEEDETSPLVPVPSSIASSEAPEPPASTRVTPAPEPKAKPGLSMGAALLAVRARSRLQRKHLAQQLSSSSSSEVSASSASSLSPSSSSSSDFAETRAKADALRARLQAAQARLAAARETEVSSSETESSETSEASFLSSDGEWDALWQSQRAAAMERQQRKAAYRRLEEENTRLAATRRRDDKLQRQVEAERERAVELLKEATRRAKEEKDLIARQPPPARDWSDTVVLSTPQIFVNSQAACAPFADSGRDEGGRDEWYEVSDACSRRAESSNESRTTAGAKLRQQQLDL 1986
3 -18.300IDP92687 Ser-Asp rich fibrinogen/bone sialoprotein-binding protein SdrE [Staphylococcus aureus subsp. aureus str. Newman] YP_001331559 [Staphylococcus aureus subsp. aureus str. Newman]  ali follow..  14  26RKYTVGTASILVGTTLI--GLGNQ-EAKAAENTSTENAKQDDATTSDN-----------------------------------KEVVSETENNSTTENNSTNPIKKETNTDSQPEAKKESTSSSTQKQQNNVTATTETKPQNIEKENVKPSTDKTATEDTSVILEEKKAPNNTNNDVTTKPSTSEPSTSEIQTKPTTPQESTNIENSQPQPTPSKVDNQVTDATNPKEPVNVSKEELKNNPEKLKELVRNDSNTDHSTKPVATAPTSVAPKRVNAKMRFAVAQPAAVASNNVNDLIKVTKQTIKVG.................................................................................................................................................................................................................................................................................................... 294
4 -18.100IDP92699 Ser-Asp rich fibrinogen/bone sialoprotein-binding protein SdrE [Staphylococcus aureus subsp. aureus USA300_TCH1516] YP_001574462 [Staphylococcus aureus subsp. aureus USA300_TCH1516]  ali follow..  13  26RKYTVGTASILVGTTLI--GLGNQ-EAKAAENTSTENAKQDDATTSDNKEVV-----------------------SETENNSTTENNSTNPIKKETNTDSQPEAKKESTSSSTQKQQNNVTATTETKPQNIEKENVKPSTDKTATEDTSVILEEKKAPNNTNNDVTTKPSTSEPSTSEIQTKPTTPQESTNIENSQPQPTPSKVDNQVTDATNPKEPVNVSKEELKNNPEKLKELVRNDSNTDHSTKPVATAPTSVAPKRVNAKMRFAVAQPAAVASNNVNDLIKVTKQTIKVGDGKDN........................................................................................................................................................................................................................................................................................................... 299
5 -16.700CPX_91685_91738 Complex of CO1A2_HUMAN with Q5YB85_STRSG [Undefined organism]  ali follow..  100 1368RKLKKGTASVAVALTVLGAGLASHTEVKAAENTYDRWKAQTEEARTDKLIAGFANLDADVTNLGKMMDELQKLKDFSKQNNSIGEYARYLQKLNDQFQEYYEQVVGDDSRRVLAKELAKNTELNEKLSELSTTSQALAKELQEQKENYDLVKTVHADTVKKHQKLVDEITKKLGEEETERHSLQEELNKAQQELAQKQQELKDKQADYDLVVETHAYTVKEHQKLVDEITKKLGEEETERHSLQEELNKAQQELAQKQQELEAEKLAKEGIVDSLTAYVTEKEAEVKKLTDSLAAKDAEIQEKEAEKDRQQHMYEAFMSQLKEKVEKQEQELAKLKQLETINNNLLGNAKDMIAKLSAKNEQLASDKAKLEEQNKISDASRKGLRRDLNASREAKKQLEAEHQKLEEQNKISEASRKGLRRDLDASREAKKQVEKDLANLTAELDKVKEDKQISDASRKGLRRDLDASREAKKQVEKALEEANSKLAALEKLNKELEESKKLTEKEKAELQAKLEAEAKALKEKLAKQAEELAKLRAGKASDSQTPEATPGNKVVPGKGQASQAGTKPNQNKEPMKETKRQLPSTGEATNPFFTAAAL 1965
6 -12.800IDP91740 Q6V4L1_STRPY [Streptococcus pyogenes]  ali follow..  58  1RKLKTGTASVAVALTVVGAGLASQTEVKAEN-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAQNGVLSELPGQAQAFSRAFLHEREKNGELRLENEGLKTDLKKKEQELESLKGDVEKLKDEVALERLKNERHVHDEEAELERLKNERYEHDKKEAERKALEDKLADKQEHLNGALRYINEK-----------------------------EAERKEKEAEQKKLKEEKQISDASRQGLRRDLDASREAKKQVEKELDKVKEEKQVSDASRQGLRRDLDASREAKKKVEADLAALTAEHQKLKEEKQISDASRQGLSRDLEASREAKKKVEADLAEANSKLQALEKLNKELEEGKKLSEKEKAELQARLEAEAKALKEQLAKQAEELAKLRAGKASDSQTPDAKPGNKAVPGKGQAPQAGTKPNQNKAPMKETKRQLPSTGETT......... 398
7 -12.300IDP91742 Q6V4L9_STRPY [Streptococcus pyogenes]  ali follow..  83  1RKLKTGTASVAVALTVLGAGFANQTEVKAAD....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 31
8 -11.800IDP06012 membrane-attack complex / perforin domain-containing protein [Toxoplasma gondii ME49] EEB00555 [Toxoplasma gondii ME49]  ali follow..  9  12.....................................................................................................................................................................................................................................................................................................................................................................TESRLQHIPFSTTRYLPIRSHVLQSTVERIESPEALNEVPTKVERNEFTEKGDKTEQVLTAQADHKSLLEGRSVRLESTSTAPDDDFDFLFEDDTPKKPKSRVNKGTSSDETSPGDRSSGEGSSDSDSLLSVVHRTKGNATQANKNQTRITHPKSKAQHQKKVTKKQGIPGSDSLGTSSADFDFDIDSSSNTQADDSQRQSLGDSSALDLFGSDTGDTGDIFGFSNSSSDGGNAAANDG.. 250
9 -9.600IDP05117 putative collagen-binding protein [Clostridium difficile 630] CD2831 [Peptoclostridium difficile 630]  ali follow..  12  1..MKKGN-ALLISLIMI---MVVST-IYPTVSYASELGENSQIQSGST-------------------------NSSTGEEKESDNKKPEQTPEKDKATDNKKPEQTPEEEKPTDNKKPEQTPEEDKSTDNKKPEQTPEGEKPIDNKKPEQIPEEDKSTDNKKSEQALEDEKPLDNKNTEKTPEEDNLLEDENLLKVLEEELNEENED....................................................................................................................................................................................................................................................................................................................................................................................................... 179
10 -8.350IDP91352 electron transport complex protein RnfC [Vibrio vulnificus CMCP6] VV1_3095 [Vibrio vulnificus CMCP6]  ali follow..  10  438..............................................................................................................RQAKAEIRTRAQEADAAERAKLRFEEKKARMEREKEERENRFKKAAEDRRKEMKSTGGDDAIAAAIARVKAQKTQDSEQAPSVKPAVAAAIAKAKAKQAAAADSGSSEPDNSEMVKLREERKRLARERKAEKEQSKTPDSEEQGDKKSAVAAAIARAKAKKAQQPPLASSESSADEPEDKKAAVAAAIARAKARKAQQTDEPAPEQNREESQAAEDAPKKAAVAAAIARAKARKAQQTDESAPEQNREESQPAEDDPKKAAVAAAIARAKARKAQQTSEPAPEQNREESQPAEDDPKKAAVAAAIARAKARKAQQTDEPAPEQNREELQPTEDDPKKAAVAAAIARAKARKAQQTDEPAPEQNREESQPAEDDPKKAAVAAAIARAKARKAQQTDEPAPEQNREESQPAEDDPKKAAVAAAIARAKARKAQQTDEPAPEQNREESQPAEDDPKKAAVAAAIARAKARKAQQAEQKQNTEENE...... 919
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Schwarzenbacher R, Godzik A, Jaroszewski L. The JCSG MR pipeline: optimized alignments, multiple models and parallel searches. Acta Crystallogr D Biol Crystallogr. 2008 Jan;64(Pt 1):133-40. Epub 2007 Dec 5.