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Query: IDP91913 cell wall surface anchor family protein [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100006539 [Streptococcus pneumoniae str. Canada MDR_19A], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MICPVFILFYYKIEVAGDGTATIVFKDGSAITIPGNQLVAQDPKAQDSTKPTAEKSTVKAPAQRVDVKDITHLTDEEKVKVAILQANGSALDGATINVAGDGTATITFPDGSVVTILGKDTVQQSAKGESVTQEATPEYKLETTPGGDKGGNTGSSDANANEGGGSQAGGSAHTGSQNSAQSQASKQLATEKESAKNAIEKAAKNKQDEIKGAPLSDKEKAELLARVEAEKQAALKEIENAKTMEDVKEAETIGVQAIAMVTVPKRPVAPNAAPKTTSAPQATAGTMQDVTYQSPAGKQLPNTGSASSAALASLGLVVATSGFALLGRKTRRRKLast
1 -91.900IDP91913 cell wall surface anchor family protein [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100006539 [Streptococcus pneumoniae str. Canada MDR_19A]  ali  100  1MICPVFILFYYKIEVAGDGTATIVFKDGSAITIPGNQLVAQDPKAQDSTKPTAEKSTVKAPAQRVDVKDITHLTDEEKVKVAILQANGSALDGATINVAGDGTATITFPDGSVVTILGKDTVQQSAKGESVTQEATPEYKLETTPGGDKGGNTGSSDANANEGGGSQAGGSAHTGSQNSAQSQASKQLATEKESAKNAIEKAAKNKQDEIKGAPLSDKEKAELLARVEAEKQAALKEIENAKTMEDVKEAETIGVQAIAMVTVPKRPVAPNAAPKTTSAPQATAGTMQDVTYQSPAGKQLPNTGSASSAALASLGLVVATSGFALLGRKTRRRK 334
2 -17.900IDP05555 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo1413 [Listeria monocytogenes EGD-e]  ali follow..  10  135................EKANIQVNYVDETNQTLATSDTLSGKLGETYTTSPKAID-------KETPTNATGTYTTNTETIQINYVYEKTAVEGAN-------VSVEYINEATNESIAPTETLSGKIGTTFQAEVKEIDGYELSQVPSNQSGTYTDQTQSVIFKYKKITTPDEVAKDVTVTYKDTKGNQLADPVILKGDIGSTFETEAKSFKGYKLTKTPSNHSSVFTSDSQEVE------SKDDAVITPPVTPVNPDKPIINPVKPVNPATSTVPNKNISKKNTTKTVNQTGKTSTALQLPKTGDSENNLPLIIGVSLLISGVYIFTTRRKRVK 439
3 -15.700IDP05012 cell wall surface anchor family protein [Bacillus anthracis str. Ames] BA_5070 [Bacillus anthracis str. Ames]  ali follow..  13  23................................................................................................................................................................................................................SADTGTVTKEEATQLQQDKAKKEAAIKEQQKIEEEKKRIAQEQLKNDMAKKEEAIKAQQKSEEGKKEAAQVQPKNAATKKEVAKPAVQGEKLPNTASNN--AMMALSACLVGIGTLFGLKRRNKVK 147
4 -14.900IDP01916 hypothetical protein lmo0327 [Listeria monocytogenes EGD-e] lmo0327 [Listeria monocytogenes EGD-e]  ali follow..  12 1054..NEKGVFGASDETVANDYTLTTTYKDANGKELQAPKVDAKTYHIQDTYKTTAAVIP-----VAIPKNDQGTFGANNVT--------------NYVYQTNDYTLTATFKDAQGNELKATEVDAQKYHIHDTYTSKAAVIPGYTLEKTPTNETGTFNASDIQVN---------------------------------KANDYQLTSTFKDQQGNEIALPTVDAKTYHIHEAYTTKARLIPGYSLVAAPKNQIGAFGTSDVTVNY-KKDAIIKPITPAKPTILTIKTPASKVIKTKVVKQTLPKTGDDDAGLLNLLRLIGLVLILGVFLAVGSKKL 1347
5 -12.800IDP91521 C2 domain-containing protein [Toxoplasma gondii ME49] TGME49_040910 [Toxoplasma gondii ME49]  ali follow..  10 1665..EKKHKKKSEALPESETTAVVTVTPGEEDETSPLVPVPSSIASSEAPEPPASTRVTPAPEPKAKPGLSMGAALLAVRARSRLQRKHLAQQL-SSSSSSEVSASSASSLSPSSSSSSDFAETRAKADALRARLQAAQARLAAARETEVSSSETESSETSEASFLSSDGEWDALWQSQRAAAMERQQRLQKMVSGVKAAYRRLEEENTRLAATRRRDDKLQRQVEAERERAVELLKEATRRAKEEKDLIARQPPPARDWSDTVVLSTPQIFVNSQAACAPFADSGRDEGGRDEWYEVSDACSRRAESSNESRTTAGA------------KLRQQQ 1983
6 -11.600IDP91950 beta-N-acetylhexosaminidase [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100006639 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  13 1034......................................LKAALQGLKPAATHSGSLDENEVAANVETRPELITRTEEIPFEVIKKENPNLPAGQEITAGVKGERTVLTENGKTTETVLDSQVTKEVINQVVEVGAPVTHKGDESGLAPTTEVKPRLDIQKEEIP-----------------------------TTVTRENPLLLKGKTQVITKGVNGHRSNFYSVSTSADGKEVKTLVNSVVAQEAVTQIVEVGTMGQAAIAEEKPKLEIPSQPAPSTAPAEESKALPQDPAPVVIEKKLPETGTHDSAGLVVAGLMATLAAYGL--TKRKED. 1312
7 -11.500IDP06525 gene: fms17; LPXTG family cell surface protein Fms17 [Enterococcus faecium DO] AFK58157 [Enterococcus faecium DO]  ali follow..  9  322..........................................................................................................................................................................................................................DEASKRIEVIIPEFWVDAKGQPQYVVVNGQEMAELESGKVPVSAYESATPRVYNETVKETTDKPKEPSGPSNPGQSGKWSVFPQTNEART-LISLLGILLLLGAVLLIKKERGEKN 436
8 -11.300IDP05561 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo2026 [Listeria monocytogenes EGD-e]  ali follow..  9  323................KGADVTVQYLDSNGDTLATPDILSGNEGDAYASTPKTID-------TQTPTNAQGTFTEEPQTVIYVYTKNSV----------AAAPVTVKYLNEEGKILTASDNLTGNVDDPYQTKAKEFAGYTLDESKLPTNASGVFKTNAQTVTYVYKTIPASIKAHDSTMNVGDTWSAKDNFDSAVDSLGVAVPFDEVKVDGSVDTTKAGVYPVTYSFAGDSVTIKVTVKATVVPAPPITPIKPVVPAPA----NPNTPSTQQTPTKQSGTLKIKATHQEQPIVAGNLKLPTTGDNLWDSVLIFGFITVCLSFVLFFRLKKQKN 625
9 -11.300IDP05200 pepdidoglycan bound protein [Listeria monocytogenes EGD-e] lmo2714 [Listeria monocytogenes EGD-e]  ali follow..  16  248........................................................................................................................................................................................................................................................................TAPDKVKKIETKNAVKSATTKPTDVTKVTKDDKTDLPSTGDKGTEIFVVAGVIVILVAVLLLRKRKK... 315
10 -10.900IDP05655 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo0159 [Listeria monocytogenes EGD-e]  ali follow..  11  440LQDKEGNTLQTDLKTDENGVLKVTLVPGSVETSAPTGYKLDNSPVSFEVIAGETDQVVKVTKENTLEVGSVELTKLDSATKA---DKEGNTLQTDLKTDENGVLKVT-PTG---KLDNSPVSFEVVAGETDQVVKVTKENTLEVGSVELTKLDSATKATLAGATFELQDKEGNTLQTGLTTDENGVLKVTDLVPGTYQFVETKAPIGYELDTTPVSVAGETDPIVKVTKENTLVPPTPVPPTPVPPTPVPPTPVPPTPLPPVPYEPTVPPTKPEVPVTPKKTENSEDSPKTTPIRITQSLPKTGDTNSFAGLGVILIALSLSGLLLKRK..... 793
11 -10.800IDP05657 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo0175 [Listeria monocytogenes EGD-e]  ali follow..  10  193................GSDVTEEQFLTDIHASVTDNYDSTISLTSNFTSAVNLAV-------NVQATDKAGNVSNTLNVTVHVSTPAPVA----------GANITVNHLDSNGNKIAESDTLT--------------------------------------------------------------GVVNSNYQSESKKITGYTLETTPTNATGTFTDTPQTVDYIYKKDTVTPTPITVNPVEPVKPVNPVVN--------------------KPVTVKPANDNTNPSTSNSVEKTTYSSLPTTGDTDQSKSSTIFGALLLLISAPLLLFKKK.. 415
12 -10.700IDP02382 hypothetical protein lmo0320 [Listeria monocytogenes EGD-e] lmo0320 [Listeria monocytogenes EGD-e]  ali follow..  11  139..........................DYIQTAINE---LFLNNNPTGTILTITDQNAINAVQEQI-----NTVTSSEKESFQEQLNNAQQQLDARIAQEQAAIQAVNFLEDSPVNSIKAETTQDLIDQAQTLVDVLPASELKDTLQANIVKAQTELDERSKPVTPPKNDPEPDNPEEPVTPVDPATPIPDEPSTPTDPATPEKPEITTPENPESTVVEADSSENEPEKSADSKIVNN------------------------------------PIQITSQATKTATKQAKSSATKTTLPLPKAGDTETTSSILFGTLM-LSSLVLFKRKK.... 399
13 -10.400IDP91911 G5 domain family protein, partial [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100005012 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  17  661...........KVVDNGDGTHTIT-SDGTTTTTDGSHTIKVTGADGKETTTTIFDGKSPKANIVDNGDGTHTLTIVDSDGREYKSIIKDGKDGKTVENNNDGTHVVT-PDGSKTEMVIKD---------------------------------GKDGKSPKVSVEDNGDGSHTITIINSDGTVTKTVIKDGKDGRDGRDGRDGKDGKCGCQDKPVTPSNDKPVPPAPNVPTPEVLVKPVPAQPTPNVPTPEVPVQPTPAVPTPEVPVPEQPVVPTPAQPATPVNAN-APTTGKENRGDKLPETGSQSDYISVLLGSGILLS--LYVGRRKED.. 974
14 -9.820IDP92700 hypothetical protein SAVC_07990 [Staphylococcus aureus subsp. aureus VC40] YP_005291191 [Staphylococcus aureus subsp. aureus VC40]  ali follow..  13 1695.LNKIVNTIKNDIANKTNAEVDRTETDGNDN-------IKVILPKVQVKPAARQSVGVKAEAQNALIDQSDLSTEEERLAAKHLVEQALNQAIDQINHADKTAQVNQDSINAQNIISALQQIQNIATNKINLIKANNEATDEEQNIAIAQVEKELIKAKQQIASAVTNADVAYLLHDEKNEIREIEPVINRKASAREQLTTLFNDKKQAIEANQATVEERNSILAQLQNIYDTAIGQIDQDRSNAQVDKTASLNLQTIHDLDVHPIKKPDAEKTINDDLARVTALVQNYRK-----------SNRNKADA........................ 1999
15 -9.800IDP05117 putative collagen-binding protein [Clostridium difficile 630] CD2831 [Peptoclostridium difficile 630]  ali follow..  11  756.......................................................................NLEDAFGNIVV-----------KDLVSDEDGIIQSTYPRGEKLKDKIKVEIGNKDIGRIVDIGNIENIRQENPPVNPPAPPNTDEPIVNPPVPPST------------------------------------------------DKPRKPSSSSDTEDTIVINPPVPPSEDIINPPIPEVLNPPVPPSEEMIETPVKQIIPIPEVVKPSVSEEKNNKVKDDTLVNPPVPPKTGDSTTIIGEILLVIGAIVGLIVLRRNKNTN. 972
16 -9.710IDP05663 hypothetical protein lmo0333 [Listeria monocytogenes EGD-e] lmo0333 [Listeria monocytogenes EGD-e]  ali follow..  11 1474.........AEKVDINKVGTYTVTLEDGQAANPVEVSVIVSDAAAEKVNVKYVDENGSEISAAETLTGNLDETFSIDAKSIAGYKCDATLSGVFSTVEQKPGVVTIKYEDTNGKAVDEDKQITGEVGDDFEAEAQT---------------------------------SGYSCRAIASGKITEEPQTITFTYSTATPSKKSGEITVQYVDESGKKLADSKKVTGNIDDSYSVEAKAIEGYSVVGDDSAKGVFTEKSQTVTFK---KKNTQVSKDDPKVKGKTNQPSSTDTKLKVDNNSLPATGDTENMILVLIGFNMLIVASIFLFRKPKTNQ 1778
17 -9.460IDP06012 membrane-attack complex / perforin domain-containing protein [Toxoplasma gondii ME49] EEB00555 [Toxoplasma gondii ME49]  ali follow..  8  4...........................SAIGGIGPTESRLQHIPFSTTRYLPIRSHVLQSTVERIESPEALNEVPTKVERNEFTEKGDKTEQVLTAQADHKSLLE------GRSVRLESTSTAPDDDFDFLFEDDTPKKPKSRVNKGTSSDETSPGDRSSGEGSSDSDSLLSVVHRTKGNATQANKNQTRITHPKSKAQHQKKVTKKQGIPGSDSLGTSSADFDFDIDSSSNTQADDSQRQSLGDSSALDLFGSDTGDTGDIFGFSNSSSDGGNAAANDGGLFSSSGMGPTGASDETSANPLGSILGGV......................... 279
18 -9.330IDP91750 SPG2_STRSG [Streptococcus sp. `group G`]  ali follow..  17  525.........................................................................................................................................................................................................................................................................ATPIAKDDAKKDDTKKEDAKKPEAKKEDAKKAETLPTTGEGSNP-TAAALAVMAGAGALAVASKRKED. 593
19 -9.140IDP05502 putative collagen-binding surface protein [Clostridium difficile 630] CD0386 [Peptoclostridium difficile 630]  ali follow..  11  769...............DEAMKVEIAY------TFNASELGGKNLVTFEELYDLSNPDEPVKVAEHKDIADDGQTVLITERIIKIHTTATDKDGNKELEAGKEVTITITLEGGTQYKLVG--WQMLKEENAELLINGKRVESDYTFTADSETMKVEVA-----------------------------------------TFDATSLDGKQLVTFEELYDLSNPDEPKKVTEHKD----------------------EDEGQTITFKEKPEVPEEPET------------PQTPEKPSRPSDSPKTGDNTNLYGLLALLLTSGAGLAFFYKRRKMKK 1013
20 -9.080IDP05538 putative collagen-binding surface protein [Clostridium difficile 630] CD3392 [Peptoclostridium difficile 630]  ali follow..  11  769...............EEEMKVEISY------TFNASALGGKNLVTFEELYDLSNPDEPVKVAEHKDIEDDGQTVLITERIIKIHTTATDKDGNKELEAGKDVTITVTLEGGTQYKLVG--WQMLKEENAELLVNGKRVESDYTFIADSENMKVEVA----------------------------------------------------TFDATSLDGKQLVTFEELYDLSNTDEPKKVTEHKDIEDEGQTIT-----------------------KEKPEVPEKPEQPQTPEKPSRPSDSPKTGDSTNLMAFIVMLLVSGGGLAGT-KRRKMKK 1013
21 -9.060IDP05755 peptidoglycan binding protein [Listeria monocytogenes EGD-e] lmo0732 [Listeria monocytogenes EGD-e]  ali follow..  11  326..................HDLTVNYVDEAGAEIHEPQTVS----------NVGDDYDVTTPEFELAIDKYELDTEQMPTNGLGTLSSEAQTVTYVYKKVNGAPVTVKYEDQNGVEITTSDVLTKEIAGFTLDNSKLPANASGIFETNPQTVTYVYQAVPATIKAHDSTIYVEDKWSAEDNFDSAVNSVGAAVSFDDLEVEGTVDTTKAGVYPVTYSFAGESVTINVTVKAKDLPAPPVTPTKPVVPIQPTNPDQPDIQAAPGEHQASTDKSEALKVTVAQKE--------QPTVAGNLKLPTTGDNDSVLYSVFGLIAVCVAFSLFFWRKKQKH 637
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Reed JC, Doctor K, Rojas A, Zapata JM, Stehlik C, Fiorentino L, Damiano J, Roth W, Matsuzawa S, Newman R, Takayama S, Marusawa H, Xu F, Salvesen G, Godzik A.; RIKEN GER Group; GSL Members. Comparative analysis of apoptosis and inflammation genes of mice and humans. Genome Res. 2003 Jun;13(6B):1376-88.