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Query: IDP91966 ABC transporter substrate-binding protein - glutamine-binding protein [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100001092 [Streptococcus pneumoniae str. Canada MDR_19A], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKSKKWIFVLCNFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKNQVVGADIDMAQAIADELGVKLEILSMSFDNVLTSLQTGKADLAVAGISATDERKEVFDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKAQLTSLTNMGEAVNELQAGKIDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRKNSDDLKEVVDKVIQKLKDEGTYQSYLEKAASLTEVEELast
1 -107.000IDP91966 ABC transporter substrate-binding protein - glutamine-binding protein [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100001092 [Streptococcus pneumoniae str. Canada MDR_19A]  ali  100  1MKSKKWIFVLCNFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVDGKNQVVGADIDMAQAIADELGVKLEILSMSFDNVLTSLQTGKADLAVAGISATDERKEVFDFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKAQLTSLTNMGEAVNELQAGKIDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRKNSDDLKEVVDKVIQKLKDEGTYQSYLEKAASLTEVEE 271
2 -102.000IDP91967 amino acid ABC transporter, periplasmic amino acid-binding protein, putative [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100008960 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  46  3.KMKKVLMTMFGLVMLPLLFACSNNQS---AGIEAIKSKGKLVVALNPDFAPFEYQKVVDGKNQIVGSDIELAKAIATELGVELELSPMSFDNVLASVQSGKADLAISGVSKTDERSKVFDFSTPYYTAKNKLIVKKSDLATYQSVNDLAQKKVGAQKGSIQETMAKDLLQNSSLVSLPKNGNLITDLKSGQVDAVIFEEPVAKGFVENNPDLAIADLNFEKEQDDSYAVAMKKDSKELKEAVDKTIQKLKESGELDKLIEDAFKASIEK. 268
3 -96.800IDP01968 gene: fliY; cystine transporter subunit [Salmonella typhimurium LT2] STM1954 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  25  1MKLALLGRQALMGVMAVALAGMSAKSFADEGLLNKVKERGTLLVGLEGTYPPFSFQ---GEDGKLTGFEVDFAEALAKHLGVKASLKPTKWDGMLASLDAKRIDVVINQVTISDVRKKKYDFSTPYTVSGIQALVKKGNEGTIKTAADLQGKKVGVGLGTNYEEWLRQHVQGVDIRTYDDDPTKYQDLRVGRIDAILVDRLAALDLVKKTKGT--LAVTGDAFSRQESGVALRKGNEDLLKAVDNAIAEMQKDGTLKALSEKWFGADVTQ. 266
4 -96.000IDP04547 amino acid ABC transporter, amino acid-binding protein [Clostridium perfringens ATCC 13124] CPF_0581 [Clostridium perfringens ATCC 13124]  ali follow..  35  1MKFKKILSVAMIGGLTLSLAGCGAKTAGSNDKVAKIKESGKLVVGLSADYAPYEFHIIKDGKDQIVGLDIDIAKEVAKNLGVDLEIKEMEFGAIIQSVKNGMIDMGISGITPDEKRKEAVDFSDIYYEAEQGILINKDNKESIKGIGDLKGKKVGAQMGSIQAEIAKG-IEGADVKLLDNVNTLILELKTGKLDAVITELPVAKIASEVNSELAVADEVIKN-SEGGSAIAIQKGNKDLVDEVNSTIKELKESGKIDQFTNDAIELVPYQK 275
5 -95.800IDP01925 gene: fliY; cystine transporter subunit [Yersinia pestis CO92] YPO1846 [Yersinia pestis CO92]  ali follow..  25  1MSFSIVRRIVLGMVAVALATGLNVKSYAAGDLLEQVKQRGTLIVGLEGTYPPFSFQ---GEDGKLTGFEVDFANALAEHMGVKAKITPTKWDGMLASLESKRIDVAINQVTISDERKKKYDFSTPYTVSGIQVLTKKGNEGQFTKPEDLQGKKVGVGLGSNYEQWLRENLKDVDIRTYDDDPTKYQDLRVGRTDAILVDRLAALDLVKKTND---LAVAGPAFARQESGVAMRKNNPELLAAVNNAIAEMQKDGTLAKISEKYFGADVTQ. 266
6 -93.300IDP91975 ABC transporter substrate-binding protein - glutamine transport [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100009843 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  23  1..MKKWMLVLVSLMTALFLVACGKNSSESGDNWSKYQSNKSITIGFDSTFVPMGFA---QKDGSYAGFDIDLATAVFEKYGITVNWQPIDWDLKEAELTKGTIDLIWNGYSATDERREKVAFSNSYMKNEQVLVTKKSS--GITTAKDMTGKTLGAQAGSSGYADFEANVANKEANQYQTFNEALIDLKNDRIDGLLIDRVYANYYLEAEGVLNDYNVFTVGLETEAFAVGSRKEDTTLVKKINEAFSSLYKDGKFQEISQKWFGEDVATK 272
7 -93.200IDP05446 hypothetical protein lmo1738 [Listeria monocytogenes EGD-e] lmo1738 [Listeria monocytogenes EGD-e]  ali follow..  23  1..MKKGLLITVMLMVMLALGACSSSES-KEDQWSRIKKDKEVVIGLDDSFVPMGFR---DKDDNLVGFDIDLAKAVFAEYGIKAKFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVAFSQPYMKNEQVLVTLKSS--NINQFSDMKNKTLGAQNGASSIDDMAKKINNNEPELYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIITGGFDATDFAVGMRKSDKELQKKINEAFEKLYKEGKMQEISKKWFGDDEIAK 270
8 -90.200IDP05139 amino acid ABC transporter, solute binding protein [Bacillus anthracis str. Sterne] BAS0353 [Bacillus anthracis str. Sterne]  ali follow..  23  3.RKLLTIVASITLCTSFILGACSKESATT-----SSNGKKEFRYAMSGLYKPFNYK---ENDGKLVGFDVEIGEALAKKMNMKPTPITNPWETLIQGLKAKKYDVILGSMAITEERLKAVNFSNPYYRSGAQIFVAKKN-TSISSPEDLKGKKIGVVKASTFKDLVAKH--TDQITEYDSDITALMDLEPGRIDAVITDQMVGLRMIKEGKSN--IKEAGKPLNLDEMGIAIRKDDKEMVEKVNKALDEIIKDGTYEKISKKWFGRNILGE 259
9 -90.200IDP05579 amino acid ABC transporter, amino acid-binding protein [Bacillus anthracis str. Ames] BA_0855 [Bacillus anthracis str. Ames]  ali follow..  24  1MK-KLFSVLAVTTLAIGIVAGCGKEEKASQDALQKIKQSGELVIGTEGTYPPFTFH---DSSNKLTGFDVELAEEVAKRLGVKPVFKETQWDSLLAGLDAKRFDMVANEVGIREDRQKKYDFSKPYVSSSAALVIAKDK-DKPATFADVKGLKGAQSLTSNYADIAKKN--GAEIIGVEGFSQAAELLASGRVDFTINDKLSVLNYLETKKDAKI-KIVDTEKEASESGFLFRKGSTKLVQEVDKALEDMKKDGTYDKITKKWFGENVSK. 265
10 -89.100IDP00474 gene: glnH; glutamine ABC transporter periplasmic protein YPO2512 [Yersinia pestis CO92]  ali follow..  31  1..MKSLVKVSLAALALAFAVS-------------AYAAEKELIVATDTAFVPFEFKQ----GDKYVGFDIDLWDAIAKKLDLKYTLKPMDFSGIIPALQTKNVDLALAGITITDERKKAVDFSDGYYNSGLLVMVKADN-NDIKSEADLQGKVLAVKSGTGSVDYAKANIKTKDLRQFPNIDNAYLELGTGRADAVLHDTPNILYFIKTAGNGQF-KAVGESIKAQQYGVAFPQGS-DLREKVNAALKSLKEDGTYAEIYKKWFGVEP... 246
11 -89.000IDP02749 amino acid ABC transporter, periplasmic amino acid-binding protein [Coxiella burnetii RSA 493] CBU_0482 [Coxiella burnetii RSA 493]  ali follow..  22  11.RFFRWIPAFVRMTGTFYFVSCLFVSP--------VFATDTIKFATEATYPPYVY---MGPSGQVEGFGADIVKAVCKQMQAVCTISNQPWDSLIPSLKLGKFDALFGGMNITTARQKEVDFTDPYYTNSVSFIADKNTPL-TLSKQGLKGKIIGVQGGTTFDSYLQDSFGNITIQRYPSEEDALMDLTSGRVDAVVGDTPLIKQWLKQNGRREYVLINDPNYFGKGVGIAVKKGNQALLLKLNKALAAIKANGVYAAIVQKYFGQE.... 269
12 -89.000IDP01901 gene: artI; arginine transport system [Salmonella typhimurium LT2] STM0890 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  26  1..MKKVLIAALIAGFSL-----------------SATAAQTIRFATEASYPPFES---MDANNKIVGFDVDLANALCKEIDASCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREKQVLFTTPYYDNSALFVGQQGK---YTSVDQLKGKKVGVQNGTTHQKFIMDKHPEITTVPYDSYQNAKLDLQNGRIDAVFGDTAVVTEWLKANPKLAPVKVTDKDYFGTGLGIAVRQGNTELQQKFNTALEKVKKDGTYETIYNKWFQK..... 243
13 -88.700IDP00526 gene: artI; arginine-binding periplasmic protein 1 precursor YPO1351 [Yersinia pestis CO92]  ali follow..  27  1..MKKLIIATVLASISL-----------------SASAAETIRFAAEATYPPFEF---IDANNKMQGFDIDLANALCKEMQADCTFTNQAFDSLIPSLKFKRFDAVISGMDITPERQKQVAFTQPYYDNSALFIAQKDK---VADLAALKGKRVGMQNGSTHQKYLMEKHPEITAVPYDSYQNAILDLKNGRLDAVFGDTAVVNEWLKQNDQLAAVKVTDADYFGTGLGIAVRQSNTELQGKLDAALTKVKADGTYQTIYKKWFQQ..... 243
14 -88.300IDP05630 amino acid ABC transporter, substrate-binding protein [Clostridium difficile 630] CD1774 [Peptoclostridium difficile 630]  ali follow..  22  1MKLKKVGIFTIMLGLLGGVVGCSKPDNEKDKD-ASKESKKEVVVGFDNTFVPMGFL---DEKGDTVGFDVDLAKETFKRLGMEVKFQPIDWSMKETELNDSTVDVLWNGYSITDERKKIVSYTEPYLQNKQIIVTLSDS--KINSKADLKDKEVGTQQGSTALDAVEKDLKGGAPVLYDTYDKALRDLEIGRTSAVVGDEVLIRYYMGQKGEDKY-KVLKDDFGLEDYVVATSKENPELCEKINETLKEMKKDGTFDKIYDKWFK...... 267
15 -88.300IDP91031 solute-binding periplasmic protein precursor for ABC transporter [Yersinia pestis KIM 10] y4125 [Yersinia pestis KIM10+]  ali follow..  25  1..MKQDLSIKKSAIALTLLAGLATSGTAYADKLDDIKQAGVVRIAVFDSNPPFGYID--PQTKKLVGYDVDVANAIAKDLGVKVELRATNPANRIPLLASKKVDLIAANFTITDERAKEVNFSLPYFATGQKFIARKGV---LKTPEDIGKLRIGADKGTVQEITLREHYPTAKVISYDDTPLAFTALRNGNVQAITQDDAKLVGLLGNIPEAQ-FEISPFSITKEYQGVGIPKGEDRLTAVVNETLIKLEKEGDAVKIYDRWFGPETNSA 267
16 -87.800IDP01430 amino acid ABC transporter, periplasmic amino acid-binding protein VC1863 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  23  1MDMKKWLVATALIATTISGVT-------------QAKEWKTVRFGIEGAYPPFSW---TEADGSLKGFDVDMANALCAEMQVECKIVPQDWDGIIPSLLARKYDAIIAAMSITEERKKKVDFTGKYAQIPNKFIAKKGADL-AFTKEGLKGVKIGVQRATTHDKYITDNYGDVDIVRYGSFDEAYLDLANGRIAAVLGDASALEEGMLNKPGGDAYELTDPKWFGEGMGIAVRKQDKELTEKLDAAITALREKGIYQQIQAKYFKYDVYGE 260
17 -87.400IDP01699 extracellular solute-binding protein [Yersinia pestis CO92] YPO3343 [Yersinia pestis CO92]  ali follow..  22  1MQMKKLSLGIMVLALISSQHVLAKN-------WQEIKQSGELRIGVPGDYAPLAFH---DKQGQLIGYDVDMANAFGEDLKLKVNFVSTSWPTLSDDLAADKFDIAMGGVTATPGREAQFALSHAVVKNGKIALTHCQKVNKFPTLDDRQNVKVIVNPGGTNQSFVDANIKQAQIIRTKDNVANLQGIRNKSADIMFTDLIEGDYYQSKEPGVFCVATPEVAGTGSYKVYMMAKDNQPLLEEVNQWL----AGKTKTLLAQKWNISE.... 256
18 -87.100IDP91990 ABC transporter substrate-binding protein - unknown substrate [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100004332 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  29  1MKFKPLLTVLALAFALIFITACSSGGNAGARTIDEIKKSGELRIAVFGDKKPFGY---VDNDGSYQGYDIELGNQLAQDLGVKVKYISVDAANRAEYLISNKVDITLANFTVTDERKKQVDFALPYMKVSLGVVSPKTG--LITDVKQLEGKTLIVTKGTTAETYFEKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWALENKGFEV--GITSLGDPDTIAAAVQKGNQELLDFINKDIEKLGKENFFHKAYEKTLHPTYGDA 274
19 -87.100IDP04366 amino acid ABC transporter, amino acid-binding protein [Clostridium perfringens ATCC 13124] CPF_1531 [Clostridium perfringens ATCC 13124]  ali follow..  21  1MK-KLLFLLISIVILSILISGCSSKKI------ETKKDSNTVIIGIDDTFVPMGFK---NEKGDIVGFDVDLSKEAFKRMNLKVIFQPIDWSMKETELTNGNIDLIWNGYTMTHEREKKVAFTNSYLKNRQVIVTLSNS--NINTLNDLKGKTVTTQDGSSSLDTLFERFKNGEPVLFDSFNDCFMDLEAGRSDAVVCDEILAQYYIFKNDPSKF-HVLTEDLGEESYSIGLRKNS-NLIDHLNKTLEDMKEDGTIAKISNKWFGKDLEK. 262
20 -86.100IDP06533 extracellular solute-binding protein, family 3 [Enterococcus faecium DO] EAN09753 [Enterococcus faecium DO]  ali follow..  22  3.RLKKIRLIFLLGIAFLALAGCKGNGLANEDILERSKSTNEIIWGVKYDTRLFGMMD--IESRTVQGFDVDIAKAITKKINGKTEFVEVTSKTRIPLLKNGNIDAIIATMTITDERKKQVDFSDVYFDAGQALLVKKGS--QIKSVDDLNASTVLAVKGSTSAANIRQHAPDAKILELENYAEAFTALQSGQGDAMTTDNAILLGIADENPEYE---LVGGTFTNEPYGIAINKGQENFLKAVNQALEEMHADGTYDKIYQKWFPNETEGK 269
21 -86.000IDP01356 amino acid ABC transporter, periplasmic amino acid-binding portion VC0010 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  22  1..MKHWFNIALAALAL---------------SSATVQAATEVKVGMSGRYFPFTFVK----QDELQGFEVDVWNEIGKRNDYKVEFVTANFSGLLGLLETGRIDTISNQITITDARKAKYLFSDPYVIDGAQITVRKGN-EAIKGIDDLAGKTVAVNLGSNFEQLLRNHDKDGKINIKTYDTGIEHDVALGRADAFVMDRLSALELIEKTGLPLQLAGSPFETIENAWPFVNNEKGQQLQGEVNKALAAMRADGTLSQIALKWFGTDISQ. 248
22 -85.600IDP91402 ABC-type amino acid transport, signal transduction system [Vibrio vulnificus CMCP6] VV1_1001 [Vibrio vulnificus CMCP6]  ali follow..  21  1..MNNWIKASIAAIALSVATF-------------QAVAEEVVKVGMSGRYFPFTFVK----QDQLQGFEVDMWDEIGKRNGYKVEYVTANFSGLFGLLETGRIDTISNQITMTDARKAKYLFADPYVVDGAQITVRKGN-DSIKGVADLAGKTVAVNLGSNFEQLLRDYDKDGKINIKTYDTGIEHDVALGRADAFVMDRLSALELIKKTGLPLQLAGEPFETIANAWPFVNNERGVKLQGEVNKALAEMRADGTVEQISIKWFGADITK. 250
23 -84.000IDP05633 amino-acid ABC transporter,substrate-binding protein [Clostridium difficile 630] CD2177 [Peptoclostridium difficile 630]  ali follow..  23  1MK-KLKLIIMFALVSALLVTGCSSGNN------KNKEEQKVIRVATSGTYYPFAFKD----KDKLKGFEVDFWDEFAKRTNCKVEWVLTDFSGLFGLLEADKADAVSAQLTATPEREKKYAFSDAYNYSGTNIIVREDD-TSIKSIDDLVGKKVGVGTGAVANEILKEKYPNDEIKSSATLKGNYQDLEMGRLDAVVAQDVEALIAIKEQKL---LKMIEPPIQFGACSFALQKNGEKWTKEINEVIEEMYKDGTLTKISENWLGKDITKE 263
24 -83.700IDP05634 amino-acid ABC transporter,substrate-binding protein [Clostridium difficile 630] CD2174 [Peptoclostridium difficile 630]  ali follow..  21  7IKRNIIKCLVAVLSLTFVITGCSKK--------EEVKNEKVITVASSNSADPYSYVD----NGEHKGFEVDMWKEIGKRSGYKIKMEPTGFSSIFGMLDSGKVDVAANFFGMSKERLEKYDASIPYGSDSVCIAVKDGN-NEINKLEDLKGKVVAVSEGSQGQQVATSVNKDFQEKVYGDGTSGLQDLDLGRVSAWIDAELTIVGDAKKANM---VRVLDKKLSATNIAYFFKKNDDKIKEDVNKAIEEMLADGTVKKISEKWFGMDVSAD 267
25 -83.400IDP02641 amino acid ABC transporter amino acid-binding protein [Bacillus anthracis str. `Ames Ancestor`] GBAA0640 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  26  5..KKLFTLIVFSCLFVLVVAGCGSKKDEAGGAVEQIKKRGKLVVGVKNDTNLFGLKN--PSTGQVEGFDVDVAKALAKKILKKLELKEVTSKTRIPLLKNGDIDAIIATMTITEERKKEVDFSDVYFKAGQSLLVKKGS--DIKSIDDVKGVKVLAVKGSTSTNNIRQKSPEATVLEFENYSEAFTALKAGKGDVLTTDNAILYGMAKQDSNYE---VVGKIFTDEPYGIAVQKGADDLTKEINSLIKDMKANGEYDKLYEKWIGQKPEK. 276
26 -82.700IDP05245 hypothetical protein lmo2349 [Listeria monocytogenes EGD-e] lmo2349 [Listeria monocytogenes EGD-e]  ali follow..  20  1MK-KKYGILALALTAALTLSACGGKEEPEAAN----QKVQTITVGTGTQFPNVCF---LDENGKLTGYDVELVKEIDKRLGYKFKFKTMDFSNLLVSLGAGKVDIVAHQMEKSKEREKKFLFNDVAYNNFPLQLTVLDSNNSINSTKDLAGKRVITSATSNGALVLKKINEEEIAYEGQGSNDTANQLKTGRADATISTPFAVDFQNKTSAI---EKVVGDVLSNAKVYFMLGKDETKLSKKVDEALQSIIDDGTLKKLSEKWLGADYSKE 267
27 -81.700IDP91891 putative glutamine-binding protein precursor [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100007700 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  23  1............MISLFGLAAAKPVQ--ADTSIADIQKRGELVVGVKQDVPNFGYKD--PKTGTYSGIETDLAKMVADELKVKIRYVPVTAQTRGPLLDNEQVDMDIATFTITDERKKLYNFTSPYYTDASGFLVNKSA--KIKKIEDLNSKTIGVAQGSITQCLITELGKTFKFVELGSYPELITSLHAHRIDAFSVDRSILSGYTSKRTE-----LLDDSFKPSDYGIVTKKSNTELNDYLDNLVTKWSKDGSLQKLYDRYKLKPSSH. 251
28 -81.000IDP91961 ABC transporter substrate-binding protein - amino acid transport [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100005438 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  19  1MKKKYSSLAALGLVAAGVLAACSGGAKKE----GEAASKKEIIVATNGSPRPFIY----EENGELTGYEIEVVRAIFKDSDYDVKFEKTEWSGVFAGLDADRYNMAVNNLSYTKERAEKYLYAAPIAQNPNVLVVKKDD-SSIKSLDDIGGKSTEVVQATTSAKQLEAYNAEILNYTKADFQQIMVRLSDGQFDYKIFDKIGVETVIKNQGLDNLKVIELPSDQQPYVYPLLAQGQDELKSFVDKRIKELYKDGTLEKLSKQFFGDTYLPA 271
29 -79.900IDP91962 amino acid ABC transporter, amino acid-binding protein, putative [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100007760 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  20  1MKK-----FSLLLAILPFLVACGNQATPK-----ETSAQKTIVLATAGDVPPFDYED----KGNLTGFDIEVLKAVDEKLSYEIQFQRTAWESIFPGLDSGHYQAAANNLSYTKERAEKYLYSLPISNNPLVLVSNKKN--PLTSLDQIAGKTTQEDTGTSNAQFINNWNQKTINFSGEDIGKRILDLANGEFDFLVFDKVSVQKIIKDR-GLDLSVVDLPSADSPSNYIIFSSDQKEFKEQFDKALKELYQDGTLEKLSNTYLGGSYLPD 261
30 -75.300IDP90988 gene: gltI; glutamate and aspartate transporter subunit [Yersinia pestis KIM 10] y1189 [Yersinia pestis KIM10+]  ali follow..  19  1MQMRKLALVLLLAGMTSSVAQAEAKADTAIDTLQKVKNNGVIVVGHRESSVPFSY---YDNQQKVVGYSQDYSNLIVDAIRLEVKLIPITSQNRIPLLQNGTFDFECGSTTNNLERQQQAAFSNTIFVVGTRLLTKKD--SEVKDFKDLAGKAVVVTSGTTSEVLLNKLNENMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKKPDEWSIVGTPQSEEAYGCMMRKNDPAFKALLDKTIATAQTTGVAEKSFDRWFKNPIPPK 280
31 -68.700IDP91898 amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100003105 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  20  1..MRKIYLSIFTSLLLMLGLV------------NVAQADEYLRIGMEAAYAPFNWTQDDDSNQYANGYDVQIAKKIAKDLGKEPLVVKTKWEGLVPALTSGKIDMIIAGMSPTAERKQEIAFSSSYYTSEPVLLVKKDSAVSAKSLDDFNGAKITSQQGVYLYDLIAQIPGAKKETAMGDFAQMRQALEAGVIDAYVSERPEALTAEAANSKFKMIQVPGFKTGEEDTAIAILRKNDNRISQINASIETISKDDQVALMDRMIKEQPAEAT 269
32 -66.800IDP91947 amino acid ABC transporter, amino acid-binding protein/permease protein [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100001889 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  27  253.........................TTTTLAGLKAIPVKAKYIIASDSSFAPFVF---QNSSNQYTGIDMELIKAIAKDQGFEIEITNPGFDAAISAVQAGQADGIIAGMSVTDARKATFDFSESYYTANTILGVKESS--NIASYEDLKGKTVGVKNGTASQTFLTENQSGYKIKTFADGSSMYDSLNTGAIDAVMDDEPVLKYSISQGQKLK---TPISGTPIGETAFAVKKGNPELIEMFNNGLANLKANGEFQKILDKYLASESST. 492
33 -45.100IDP01503 amino acid ABC transporter, periplasmic amino acid-binding protein, putative VCA0978 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  22  1..MMKSIATLISVVLCSFSA-----------------WAQTITAAQD-PWPPF-----VMENAQQKGLSVDIVTAAFATQGYTVEFTIMPWSRALNDVKEGKIDILP-ATWFTQERTAYLTYSDNYLTNQVKFIKKAGDNFEFAGLASLNGKKVGIVRGYGYGDEFMND-PSFFRPESTDLKQNLQKLQAGRIDLAVEDELVAKSIITEAGNLADFAFTNQAISENPLHVTSGKRSEELVAAFNKGLAEIKANGTFDKLLADY........ 240
34 -35.700IDP00173 putative membrane protein YPO2922 [Yersinia pestis CO92]  ali follow..  20  1MTRIKLSYFTIGLVALLLALALWPWRNGQEGQLDQIKARGELRVSTISSPLIY-------EKDTPSGFDYELAKRFADYLGVKLVIIPHNIDDLFDALDNDDTDLLAAGLIYNRERLNRARTGPAYYSVSQQLVYRLGS-PRPKSFSDLKGQVVVASGSAHMTTLKRLKQTKYPELNWSSGKELLEQVAEGKLDYTLGDSATIALLQRIHPQLA---VAFDVTDEEPVTWYFQSDDDSLYAAMLDFYSEMVEDGSLARLEEKYLG...... 266
35 -23.100IDP05398 putative phosphonate ABC transporter, phosphonate-binding protein [Bacillus anthracis str. Ames] BA_3750 [Bacillus anthracis str. Ames]  ali follow..  11  1MLKKFFAMSTTVVLAAGLLSGCGTKESSANKNADTKYVPKTLNVQFVPSQNADTLEAKAK----------PLEKLLSDKLNIPVKVISTNYNTIVEAMASKQVDVGFLPFGVDDETGAPKKDLVDFYKS--EFVVKKD--SNINSVKDLKGKKIGYVTSSAGYVWPAAVLLKEGVDPLKGHDQSLIALLNGDVDAAVVFQDARNIVKKDYPNIDQTKIVKFTEKIPNDTISVRSDDEEWSKKLQDAFIEIGKNEEGHKIIKEVYSHE.... 289
36 -21.500IDP05207 putative sulfonate ABC transporter,solute-binding lipoprotein [Clostridium difficile 630] CD2365 [Peptoclostridium difficile 630]  ali follow..  14  3LSKKIQALILFGVMGTSILTGCSSKPKEKEEAKTG-KDDYTITVGYYNC--------------HMTAGPVAESAGIYKDLGLNVKT--VGNGKVPEAMAAGKMDAGYIGTKGL-PKGSPITIAANNHTGGSEYLIVSKD---IKEPKDLIGKKIATDMSDFLWTSDYGPESKYEVVNMDSDKDKYLALKTGKIQAFTSCDPWGSVAENDGAGKIIASTQYKEKANGK---NFIKEHPDLAKKLVLAHTK-TNPAEAAKIFAKYYNVE.... 273
37 -21.200IDP05042 putative sulfonate ABC transporter, sulfonate-binding protein [Bacillus anthracis str. Ames] BA_2921 [Bacillus anthracis str. Ames]  ali follow..  15  1MY-KKFKVLSFTLAISLFLFGCEKSTASSKK------EDVTVQIGIQQGLSPLLLAQKKG-----------WFEEEFKKEGVKVKWTEFQ-PPYFEAIASNRLDFGEVGSAQAAGIGFTEIANTSYARKGTGILVQKD--SKITSIKELKGKKIAVAKGSSAFNLLYRALDKEGINAKDQPDEAQPAFESGSVDAWAIWDPFISLHTVNKGAKVITDGERLNVSSPEFLIARTKFAKEHPELVEKFLKVYEKARVWQD............. 250
38 -20.500IDP05622 ABC transporter, substrate-binding lipoprotein [Clostridium difficile 630] CD0999 [Peptoclostridium difficile 630]  ali follow..  14  1MK-KYISIILLVVLTMVVLVGCSPGKDNPKNKELSVVKQVKVAVPDGLPAVAI----------------KLANENPEIKEGYETVYSIEK-EAISTRVMKKDADIAIVPSNMA-NKTSSYNIVGTVGMGSLYLV----STENIKDYSDLVGKEVGCGKGLTPDITIKSLLSDIKFNYVSSASELVPLLATGKVKTGIVPEPALSALMSKNPDIKIIKSLNDSWKEVS---EFLRDNKDFVDSFVGQLSNSID................... 256
39 -20.100IDP05119 ABC transporter, substrate-binding protein [Clostridium difficile 630] CD2989 [Peptoclostridium difficile 630]  ali follow..  18  1MKLKKLIGITILTLATASLAGCAKKNNGEKLS--------EINLT---------YVKSPLNVPSIIQKQDDLFGKEFKKDNIKVNFHEIT-PEQTQALAAGEIDFLTSALIAASNGVELKILNTYSRSPKGFMILTNN--NSIKSAADLVGKKVAGPKGTILHQVLISALDKEGLSMDDGIPEASAALSDGSVDAALIAGPAAL--KAMKSGSKLVANGEGLVDGIIVTAVSTDFAEKHPEIVERFMKVEKETLEYVN............. 250
40 -20.000IDP93815 sensor kinase protein [Yersinia enterocolitica subsp. enterocolitica 8081] YP_001007719 [Yersinia enterocolitica subsp. enterocolitica 8081]  ali follow..  17  1MKLYKIYLTWALTLLSSTAVYAAEAIVFSPQELDYIKTHPVVNYGIFPNSYPIEK---FNSIGEHIGLTRDYIDIISTVTGIKFKPVFSNDRESVTNLQSGKISL-LTSTSISFAQTHGLISSVPIFTTWPLTVTRKAT-RHIATPDDLMEGYVSITDYSSLIEWFTKQFPGVNYKIVYSPEETIAEVINRQAEAAVVLSPTALYYMNVK--PGQLKISRPHSAKISLAMAAHPEDQILINIINKAIASISAK-QQAELTAKWIISD.... 262
41 -19.600IDP90302 sensory transduction histidine kinase, putative [Borrelia burgdorferi B31] BB_0420 [Borrelia burgdorferi B31]  ali follow..  13  1MKKANFLSTNFLILLL------------VCFVNVNLFSKDIFKFKLVDQFFPFYY---KNNKGEYEGLIFSILDKWAKDNNADIMVE---HIDNLNESEIEDEAI-YLGLTYNVKLNDFFYFKSELARSISILFFKNSNKKKNTHSTFLSNFNIGVIKNTIYEDILRLKNVN-TIFLADNSQELVLALKNDKVDYIYGDCKTLHYIANNFLSEDLVIFTGDVFYSIKNRVAISRNAPEIVKNLNLDLFSYLMK-MPEELVFSFLD...... 245
42 -18.800IDP05024 ABC transporter, substrate-binding protein, putative [Bacillus anthracis str. Sterne] BAS4675 [Bacillus anthracis str. Sterne]  ali follow..  17  1...........MLLAVFTFAACSSKKEGTKEQTQNIR-----EVTHSLFYAPL----------------VGIEKGFFKDEGLNVDLQTTA-DKTMTALLSGGIDIALVGSETSGAKDPIINFAQLTQTDGTFLVSRKK--LDSFNWNDVKGVTFLGRKGGMPQMVGEYVLKDTNLIQNIEFANIANAYASGTGEFVQLFEPTASIFEKEGKGYIVASFGNESGTVPYTSFMAKKKDKAAAEKFTRALYKAQQ................... 241
43 -18.400IDP91135 hypothetical protein SAOUHSC_00137 [Staphylococcus aureus subsp. aureus NCTC 8325] SAOUHSC_00137 [Staphylococcus aureus subsp. aureus NCTC 8325]  ali follow..  10  1MKR----LSIIVIIGIFIITGCDWQRTSKERSKNA-QNQQVIKIG----YLPITHSANLMMTKKLLSQ---------NHPKYKLELVKFNWPDLMDALNSGRIDGASTLIELAKQKGSNIKAVALGHHEGNVIMGQKG--MHLNEFNNNDDYHFGIHRYSTHYLLLEELRKQLKIKPGHSPAEMPAALSEHRITGYSVAEPFGALGEKLGKGKTLKHGDDVIPDAYCCVLVLRGE-QAFVQDYKKSGFKMNDRKQSVDIMTHHFKQS.... 268
44 -18.000IDP04166 sensory box sensor histidine kinase/response regulator VieS [Vibrio cholerae O1 biovar eltor str. N16961] VC1653 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  22  2...................................................PYWG----GTGQEPIGIEHDFASGIAKELGINIEYKGFTIEALLNAVSTGKADM-AIGFGQTLAREGKFLFSKPLYENVRVIWLRDKA----MEEKPFASLKWVCIQGTSYCEILKD-RGYPNIIMARNYSSSVEMIRQGIADATVTNYVSLNHYLSQKRLALGKVIFDPDLGVQTNRILINNNEPLLLSAINKVIDADKQG.................. 194
45 -17.200IDP91987 ABC transporter substrate-binding protein [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100008765 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  14  3.KTWKVFLTLVTALVAVVLVACGQGTASKDNKEAELKK-----VDFILDWTP---------NTNHTGLYVAKEKGYFKEAGVDVDLKLPPEESSSDLVINGKAPFAVYFAKKLEKGAGITAVAAIVEHNTSGIISRKS--DNVSSPKDLVGKKYGTWNDPTELAMLKTLVESQGGDFEKNDSNSITPIANGVFDTALKDYVKEFDYYSPVIIANNDYLKDNKEEARKVIQAIKKGYQYAMEHPEEAADILIK................... 269
46 -16.500IDP05631 ABC transporter, substrate-binding protein [Clostridium difficile 630] CD1979 [Peptoclostridium difficile 630]  ali follow..  14  1MNFKKLGILGLVSVFTLATITGCSSNNNKDKNNDKDTSSKKVTMVLD--WTP---------NTNHTGLFVALDKGYYKEEGLDVEIVQPPESGAETLVATGKADFGISYQETSEDPLPIKAVATVIQHNTSGFASPKE--KNITTAKDFEGKTYGGWGSPSEEAVFKAVMKKNRALKIVNTGQDDFFAAMKTVDFAWIFEGWDAVKADLIGDLNFIPVKDLDERLDYYTPLI-KDNPELAKKFLKATTK...................... 253
47 -15.300IDP05357 putative ABC transporter, substrate-binding protein [Bacillus anthracis str. Ames] BA_0382 [Bacillus anthracis str. Ames]  ali follow..  14  1..MKKGLKVMLAALLAVGVAGCNPAKKEESASKDQ-------KVKVVLDWFP---------NTNHTGLYVAQAKDYYKKQGLDVEIIQPG-VTAEQMIASGKADFAISATLARVEGIPVVSVGAIIQHNTSAFASLKKD--NMTSPKDFEGKRYGGWGGPAEEATLKTIMDKNKVEKIILGQTDFFKSIGRDADFEVKDLDPALDFYSPVMITSEKHTKQDKDFVKKFMSATTEGYNFAIKEPKEAADILIK................... 264
48 -13.300IDP05563 hypothetical protein lmo2417 [Listeria monocytogenes EGD-e] lmo2417 [Listeria monocytogenes EGD-e]  ali follow..  10  1..MKKVLGLIFTLSLVLVLTACGGSSDKASSS----KDDKQLVVGASNT--------------------LEQAKPILKDKGIDLKIVKYDYVMPNKALEEGDLDAHIEPMGIYSKKVKDIK-----LKDGAQVLLSNSKSDWPRVIGIFVDNGLGVKPQDATFDDIKDNPKNLKFKYDFDPAYLMTAYNNEEGDVVAINSNFV---VDQGLNPSKDAIAIESKDSPYANIVVTTEKKKDDKNITELVKVLHSKEIQDYITKEWDG...... 269
49 -12.900IDP91970 lipoprotein [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100005433 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  13  1MKIKKWLLVALATVAGLALAACGNSEKKAD-------NATTIKIATVNR--------------------WDKIQELVKKDGITLEFTEFDYSQPNKATADGEVDLLYSGLNGSANKYTKVE-----IPANGEIAVPNDATNESRALYLLQSA-IKLDVSGTALATVANIKENPKNLKITELDASQTARSLSSVDAAVVNNTFVTEAKLDYKKALFKEQADENSKQWYNIIVAKKDWET-ADAIKKVIAAYHTDDVKKVIEESSDG...... 278
50 -12.300IDP05547 putative lipoprotein [Listeria monocytogenes EGD-e] lmo0285 [Listeria monocytogenes EGD-e]  ali follow..  16  3.KLTKGLGILLASSLVLGLAACGGGSDDKAL------STEKITIGTTAG--------------------AEEVQKLAKKDGLEIKIKTFDYNTPNTALNDGDLDANN----------QTIPFLEQQKKDKGYKLDVAFKSNDIKDLKNLKGDKIAVPNDPSNEYRGLKLFEDAGVIKLKDGVEEIVELEASQIPAQLDEVAAANFAMGAGLSINKDAIYHEPTKDNPYPNVFVVRSANKDDEVVKTLEKYYHSDEVKAFIEKEFN...... 266
51 -12.100IDP01383 thiosulfate ABC transporter, periplasmic thiosulfate-binding protein VC0538 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  13  1MNR------IKSTLTALLLAGSFQASAADQTIL--NSSYDIARELFVAYNPVFA-----EHWQQKTGKTVEIKQSHAGSSAQARSILQGLAADVVTFNQVTDVQILHKGKLIPANWQTLLPNASSPYYSTTAFLVRKGNPKNIQDWSDLVRDDVKSVFPNQQDEFLKKFLANVAVFDTGGRGATTSFVERGIGDVLITFESEVNNIRQQYGADDYQVVVPKTSILAEFPVAVRNGTYDVATEYVSYLYSEPAQRLLAE............. 280
52 -12.000IDP05580 putative lipoprotein [Bacillus anthracis str. Ames] BA_0936 [Bacillus anthracis str. Ames]  ali follow..  17  1M-LKKLGILVLGSAVALSLVACGDSTKEASNEKKEEPKQEA...................................................................................................................................................................................................................................... 40
53 -11.800IDP05370 putative ABC transporter, substrate-binding protein [Bacillus anthracis str. Ames] BA_5220 [Bacillus anthracis str. Ames]  ali follow..  13  1..MKKLLLTALISTSIFGLAACGGKDN----------DEKKLVVGASNV--------------------LEKAKPLLEKKGIELEVKKFDYVLPNKSLADKDLDANY----------QHIPYLEKEIKDKKYEFEVAGKSQKYKSLKELDGATIIMSNSVADHGRGLAILQKEGILKIKDGVDPVKATPKDNNKEGDAVLINSNYAIDTKLNPEKDAIAIESNDSPYANVVAVRKGDKDKKEIKELVEVLHSKEIEDFINKEYKGA..... 264
54 -11.800IDP00164 gene: acfC; accessory colonization factor AcfC VC0841 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  9  1MYFMKSKNRFLLISLLSFSTS---------------VFADVNLYGPGGPHVPLI----------------KVAESFEKSQSKRVNITFGPQATWNDKAKKN-ADILFGAIAEGHSERFSKFNIHPVFMREAIILVKKGNPKNIKGMADLLKPGIGIVVNDKNVEKLQAFRSNIHVFAPNSGSARKAFVDGEDIDAWIT----VDWAIANPTIGDMVRMEDEYRIYRDFNVVLAKNPSSEAIDF---FDYLTKSKDAEAIFQHY........ 252
55 -11.600IDP05442 putative lipoprotein [Bacillus anthracis str. Ames] BA_0171 [Bacillus anthracis str. Ames]  ali follow..  17  1MSKKLLSLFSAVIVAAFVITGCGQSDTTNKEQKENAAKENK...................................................................................................................................................................................................................................... 41
56 -11.300IDP05714 putative ABC transporter, substrate-binding protein [Bacillus anthracis str. Ames] BA_0175 [Bacillus anthracis str. Ames]  ali follow..  13  1MKK---VLLSIVSGAVLLLGACSAGSDKEVKA----LDEKKITVGVTGG--------------------FEKVKEVAAKDGLEIDVKVFDYVAPNVSLDEKSLDVNS----------QTKSYLDVFKAERNMKLTEVFSSKSLKDVKDLDGDAIAVPNDPTNELRALKLFEKAGVLKVDPKATEIVELEASQLPTQLSEVKAANFALGAKLSPAKDSIFREGKDSPYVNWVVVRTENKDDAVVNKLKKAYQSKEVKEFIEKKFDGS..... 265
57 -11.300IDP02622 ABC transporter, periplasmic substrate-binding protein [Coxiella burnetii RSA 493] CBU_0109 [Coxiella burnetii RSA 493]  ali follow..  14  2..LKKLMRLLISGVMLVGLTACHQKE-----------AKNEVRVGTIAGPETQLMEVAKQVALNRYGLHVNIIT--------------SDYNTPNEALADGSVDANM----------QHLPYLKAQIEMRGYKIVSIGKSKKITALTQLTGAKIAVPSDPSNEARALLLLEKAQLIQLKTHVTIIVELDAAQLSRSLGDVDLANYAIPAGLSPSRDALLTEGPNSPYANVVAVREDDKNDPRLKQLVSALHSPAVLSAAKKIFGD...... 260
58 -11.200IDP01405 gene: metQ; lipoprotein YaeC VC0905 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  10  3.FSLKSLLTIAAAASTLILAGCGEKAV----------DNNKVKIGVMAGAEAQVAEVAAKVAKEKYNLDVELVT--------------TDYVTPNAALDDGSIDANA----------QHKPYLDKQIADRGYKLAIVGNSKQIKSVDELDGARIAVPNDPTNLGRSLLLLQQQGLLKLREDVGLILELDAAQLPRSLDDVALSTYASSINLTPEKDGIFVENKESPYVNILVAREANVNAENVQNFKKAYQTDEVAKAASEIFQG...... 263
59 -11.000IDP04248 ABC transporter, substrate-binding protein [Clostridium perfringens ATCC 13124] CPF_1477 [Clostridium perfringens ATCC 13124]  ali follow..  13  1MKKKILATLLTGLVLGTSLVGCGKTEGAEAG--------KKLVVSTWGLNEDVLKETVFEPFAKEHGVEIERLTKMKNNPNSQIDITYLA-AGIFDKLDYSKIP--ASEMNEKAKSTVEAGYGPAYTLNSIGIVVDPSAGIEINSWEDLKNKKAGVDVKTDNGEAAFKELEALKVKTYSKSSDLANMFSNGEIVAAVASDFAFGTISKAKPEVINVI-SGTYLNFNTININKNSKNKDLAYEINYALSKEVQEKTAKAL............ 296
60 -10.800IDP04509 iron compound ABC transporter, iron compound-binding protein [Clostridium perfringens ATCC 13124] CPF_0440 [Clostridium perfringens ATCC 13124]  ali follow..  13  2LKRKKLLALTLTALVSMGVLAGCGQKNQEAKAEETGSGEKVVNVYSSRHYDIDK----------------QLFKDFESDTGIKVNLVDGKSDELIERMAREGADVFLTVGAENIAQLNEKDLIKDISSEKRIIVYNKENPETIKTYNDLKGKVLTRSSSSSYNEWAQGIVNNFARTPEGNDRDQAKAIMAGIGDVGIMNSYYIAKMISSSDGKEIGVLFPENTHLNLSFGAVTKNAKN-EENAVALLEYLTEEKAQKAYVDENGEFALNTK 310
61 -10.800IDP91956 ABC transporter, substrate-binding protein [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100005733 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  11  1..MFKNFKKIAFTSSLILLAACSNNASNTNQSTGSVDKSQEIVIYTNSASNGRA----------------DWLQTKASEQGYNLRLVDISGGELADRLIAEKADMVIGLNKLEFNRIKAEKLLVKYIVNQPLVLIGNKDAKMPSDWTDFKGKIFASIVSRYKDEKGELGISDKNAHVYAEGEDYISSIMDNNNDLKYSMMWGSGVLQNQKEREYKFQVMSPKVGVVTEQVGILNTSKK-QALLKEFVDWFGSSELQKEWSDKFGSIPANKK 309
62 -10.700IDP05415 putative ABC transporter, substrate-binding protein [Bacillus anthracis str. Ames] BA_5219 [Bacillus anthracis str. Ames]  ali follow..  14  1..MKKILLSVVTALSVFTLAACGGK------------EENKLVVGASNV--------------------LEKAQPILEKKGIKLEIKKFDYVLPNKALADKEIDANY----------QHIPYLDKEIQEKGYKIVNAGKSKRYKSLKDLDGGTVIMSNNVAERGRMLALLQKGGVIKLKDVKATVKDVVENNLKFKTDVEPGLSPKLYENNEGDALFINSNYAIDAKLNIAVRKGDEK--KEIKELVEVLHSKEIQDFINKEYKGA..... 262
63 -10.600IDP92625 ABC transporter, substrate-binding protein [Streptococcus pneumoniae str. Canada MDR_19F] SpneCMD_010100009638 [Streptococcus pneumoniae str. Canada MDR_19F]  ali follow..  11  1MKKKYAFASASVVALAAGLAACGNLTGNSKKAADSGDK------------PVIKMYQIGDKPDNLDELLANANKIIEEKVGAKLDIQYLGWGDYGKKMSGENYDIAFADNYIVNAQKGAYELYKKEGKD-----LYKALDPAYIKGNTVNGKIYAVPVAAFNGTLLAKYIDISGVTSYETLEPVLKQIKEKAPDVVPFAIGKVFIPSDNFDYPVANGLPFVIDLEGDTTKVVNRYEVPRFKEHLKTLHKFYEAGYIPK............. 262
64 -10.500IDP05685 gene: opuCC; hypothetical protein lmo1426 [Listeria monocytogenes EGD-e] lmo1426 [Listeria monocytogenes EGD-e]  ali follow..  15  1MKKKIALFSVLLLTSSLFLSSCSLPGLGGS-------SKDTIRIGAMA------------TESQIVS----LKELIEHDTGLKVEIVNNSTIVQHQAMLNGDVDIALAAVKKGFEERFHQTWFDSYFANTYVFMVRQDKKYNLNTVSDMRKVENELTAGVDNSWMEREGDGYKAFSK--QIGLIYTALKNNQMDVALG----STDGRIPTYNLKLLKDDKKFFPPYDASALATDEILKKHPELKTTINKLKGKISTEEMQK.......... 278
65 -10.500IDP05554 hypothetical protein CD3669 [Clostridium difficile 630] CD3669 [Peptoclostridium difficile 630]  ali follow..  12  1MKNKKIMLVLSILSISIFAVGCTNAQNGSDSSKKETKSNTNVEQPKEENNTEKEVPNNKAKPTP---------KEETKAQSATIYSFDVDKTDLIEDLNKIDENTLFEELQKLKVVPESAKLNS---------FTTKDIDGVKTGILDVSSDFTKSNLGSDAETLMLDSVAR-TYIKNMNVEQIKITVDGSNYES............................................................................ 179
66 -10.200IDP05439 hypothetical protein lmo2499 [Listeria monocytogenes EGD-e] lmo2499 [Listeria monocytogenes EGD-e]  ali follow..  15  1MKKKYLGIVAMLAAVMLVFAACGSDSSSADKANGSTKGSGSLTAVGSTALQP-------------------LVEAASKEFKAQINVQGGGSGTGLTQVQQGAVEIGNSDVFAEEKDGVDAS-DHRVAVVGMAPVVNKDVTGKTTNWKDVGGKDEKITIINRAEGSGTRATFEKWGLDGKTPIKAQEQDSSGTVRKIVSETPGAISYLA............................................................... 214
67 -10.100IDP05670 hypothetical protein lmo0617 [Listeria monocytogenes EGD-e] lmo0617 [Listeria monocytogenes EGD-e]  ali follow..  9  1MKLKSILLLMGIITFALALTACGGTEDKASTEKIETAKAETKKKSNPNELGDYKVEVKDFEGNNAIAIKTKFTNNSKENISFTTVSADASMGGSEKDVQPGGTLEVTELYKLQDTQNTDIEATELISFSKNSV.......................................................................................................................................... 157
68 -10.000IDP91953 extracellular solute-binding lipoprotein [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100002215 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  14  1MKFRKLACTVLASAAVLGLAACGNSGGSKDAGKSGGDGAK-----TEITWWAFPVFTQEKTGDGVGTYEKSIIEAFEKA-DVKVKLETIDFKSITTAIEAGTADVLFDAPGRIIQKNGKLAELNDLFTDD---FVKDVNNENIVQASKAGDKAYMYPISSAPFYMAKKMLEDAGVANLVKEGWTTDDFEK................................................................................. 192
69 -9.650IDP90639 lipoprotein, NLPA family [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj0771c [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  15  1...........MNLFKIIILACILNLSSL--------FAQNITIGATPN--------------------LELMKDDFKNKGYELKIVEFDYILPNRALEEKELDANL----------QHKPFLEEYNLKKGSNLIATTPSKKIKNLENLEGARVAIPNDATNESRALELLEKAKLIELNKNTLKFIELKAAQLPRALDDVDIANFALGAGLNPSKDTIFREDKNSPYVNYVVVRSEGKNSEKTKVIDEILRSDKFKAIINEHYKD...... 250
70 -9.580IDP05164 putative ABC transporter, substrate-binding protein [Bacillus anthracis str. Ames] BA_1735 [Bacillus anthracis str. Ames]  ali follow..  15  1MKKFSSLLFVCTLLFSAVVTGCSSKTGNVDAK-SKTTNEKKIVVYSAGPKGLAE----------------KIQKDFEKKTGIKVEMFQGTTGKILARMEAEKVDVVVLASLPAMEGLKKDGQTLAYKEAKQADKLRSEWSDD-EDWSDIKGKVNLPDPALSGSALD-EQLKKNEVTVAGANQEALDPVVTGAKDMVIAGVDYMTYSAKAKGEPVDIVYPKSGTVISPRAAGIMKDSKN-VEGAKEFIDYLLSDDVQKQISKAY........ 296
71 -9.240IDP05678 hypothetical protein lmo1041 [Listeria monocytogenes EGD-e] lmo1041 [Listeria monocytogenes EGD-e]  ali follow..  14  2....KKIVLIICCGLLLLLGACEDTPEKVQTTTIHISAAASLKDSIDDVKPLFE----------------------KANPTIKLSFDFGGSGQIRERVESGAIDGVLLASKKDADKQNLAEKTKEFAGNELVLIEPKNVDQKTEANLEQLLNDASVPAGAYAKQTLENL--KAKLVLATDVRQVLSYVEAGNADAGFV---YQTDALLSKKVQVKAKIDEKLHDPIAYYSAQVSDSDK--KEETATFLDFMNKSEAQKILEKY........ 250
72 -9.240IDP05504 gene: modA; putative molybdenum ABC transporter,substrate-binding protein [Clostridium difficile 630] CD0869 [Peptoclostridium difficile 630]  ali follow..  13  1MK-KILGILGLVACLTLGTVGCNSNEDKKDEKTTKSSDSVELNISAAASLKEAMAKIEEEYKKVDSNVKLTVNYGASGSLQQQIE-------------QGAPCDLFISAMKVLDEEKLLVSDTMKDLVKNDLVLISSAD-SSVSGMKDLTTDKVKVPAGKYADEVLTNL--KDKLVFAKDVKEVLAWVQSGNADVGFV---YFSDTVNNDKIKVVEKTDEKTHSPITYPVSVIKASKN--VDAAKKFEEFLLSESGQKIFEEF........ 264
73 -9.220IDP05694 hypothetical protein lmo2007 [Listeria monocytogenes EGD-e] lmo2007 [Listeria monocytogenes EGD-e]  ali follow..  9  1MK-KKWGVIIASLCLLLGLSACGSDEKADANEVPTLK-----------------WYMIGTPQKDTEEVMKEVNKYTEEKIGVKVEMTQIDWGDYGKRMQGENFDIAYSAAGEFVSYSQK-KYLDKEGKK-----MKAELNDVLWEGATIDGNIYGVPSNKFNKNLVDKYMDVTKVKNFSDLEPMLKTIKENEPSITPIGGNKDFKPAFPYDDNAVPLPFAVNQYEDTGKIVNFYEQPETLDIL-KSLHSFYQKGYVTK............. 258
74 -9.160IDP00403 gene: pal; peptidoglycan-associated outer membrane lipoprotein YPO1125 [Yersinia pestis CO92]  ali follow..  13  1MQLNKVLKGLMLALPVLAVAACSSNKSANNDQSGMGAGTGTENGSNLSSEEQARLQMQELQKNNIVYFGFD-AAFLRSNPSDKVVVETPEYNIALGERRASAVKMYLQGKGVSADQISIVSYGK................................................................................................................................................... 145
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. Discovering new genes with advanced homology detection. Trends Biotechnol. 2002 Aug;20(8):315-6.