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Query: IDP92066 gene: GAPDH2; apicoplast glyceraldehyde-3-phosphate dehydrogenase 2 [Toxoplasma gondii] ABO93620 [Toxoplasma gondii], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSLYPRSSVRLRTRGLFFSSSLPLSHCLFLALFLFLSFDNFLPTSRSLNSFSVPAAALRLDGRDGPRPQTPETFSSSAFAEPSPESTPGACPLSSNDGELSLQQAEALLREEQTLATEYAQRAAGDVQQFTAAAQEAAARGDMSAAKELAAAAAASAAEAEDLAAYAQAVGETDPAVLRERAKEEAERFEQEERRQRGGDAASSGTCSESSDAAFAPEFSDLRDLFFGACDATVSPDDLPSVPEALEKLAGLESDVQARGDQLDEKEKVVAEYLVAAQEAAVRHEEASRAFEDAKRNKKENLAAAAEKAALEAAAEYADLTTAAQLVTEEAEQESAKALADAVAAGDLRFAINQKIVNEAGPEARGKVPRALLAPKHVRISDPAAGRVLKIFFHNNFAPFEDLPCAALHADAHLCRQHPRCVVQVEQSGDEVLQRCLLDEAYLALLTKTPDFCAAAPAEAETGLGNSAAQATGTPVSPFAGAAPLEPMAAVTEGEIEAVALDLLQESGVDGPAVLEHMARDGRGSASDLCSLVQTLATELLQTERDPRCAAAPTSEDRENIALTTEALLTSAFGFLGPASPSATAATAATVASGTPQNARSASIRSHRRNSFAPTGKRAVAPVPRVSPTGLFGLLGSSSEKASAPIRLGINGMGRIGRLVFRIAMSRPDVAVTHINCSMDPAYIAYMLKYDSVHGKFDGEIVPTETSLIVNGQEVTVSNTRDPEEIPWADKGADYVCESTGVFCTTEAAAKHVNRPGGAKHAIISAPAKDETTPTLVVGVNAEQDYESSMKVVSCASCTTNGLAPLVKVIDENFGLVEGLMTTVHAATGTQKVVDGTSKKDWRGGRAAAGNIIPSATGAAKAVARCLPHMKGKLTGMAFRVPTLDVSVVDLTCRLNKSTTYEEIKKAVREASETYMRGIIGYTEEPIVSQDIVGSQCSTVFDANAGIMLNPNFVKLVSWYDNEYAYSARLVDLIAVMAAKDGVVSPGTGLDRRPFLast
1 -310.000IDP92066 gene: GAPDH2; apicoplast glyceraldehyde-3-phosphate dehydrogenase 2 [Toxoplasma gondii] ABO93620 [Toxoplasma gondii]  ali  100  1MSLYPRSSVRLRTRGLFFSSSLPLSHCLFLALFLFLSFDNFLPTSRSLNSFSVPAAALRLDGRDGPRPQTPETFSSSAFAEPSPESTPGACPLSSNDGELSLQQAEALLREEQTLATEYAQRAAGDVQQFTAAAQEAAARGDMSAAKELAAAAAASAAEAEDLAAYAQAVGETDPAVLRERAKEEAERFEQEERRQRGGDAASSGTCSESSDAAFAPEFSDLRDLFFGACDATVSPDDLPSVPEALEKLAGLESDVQARGDQLDEKEKVVAEYLVAAQEAAVRHEEASRAFEDAKRNKKENLAAAAEKAALEAAAEYADLTTAAQLVTEEAEQESAKALADAVAAGDLRFAINQKIVNEAGPEARGKVPRALLAPKHVRISDPAAGRVLKIFFHNNFAPFEDLPCAALHADAHLCRQHPRCVVQVEQSGDEVLQRCLLDEAYLALLTKTPDFCAAAPAEAETGLGNSAAQATGTPVSPFAGAAPLEPMAAVTEGEIEAVALDLLQESGVDGPAVLEHMARDGRGSASDLCSLVQTLATELLQTERDPRCAAAPTSEDRENIALTTEALLTSAFGFLGPASPSATAATAATVASGTPQNARSASIRSHRRNSFAPTGKRAVAPVPRVSPTGLFGLLGSSSEKASAPIRLGINGMGRIGRLVFRIAMSRPDVAVTHINCSMDPAYIAYMLKYDSVHGKFDGEIVPTETSLIVNGQEVTVSNTRDPEEIPWADKGADYVCESTGVFCTTEAAAKHVNRPGGAKHAIISAPAKDETTPTLVVGVNAEQDYESSMKVVSCASCTTNGLAPLVKVIDENFGLVEGLMTTVHAATGTQKVVDGTSKKDWRGGRAAAGNIIPSATGAAKAVARCLPHMKGKLTGMAFRVPTLDVSVVDLTCRLNKSTTYEEIKKAVREASETYMRGIIGYTEEPIVSQDIVGSQCSTVFDANAGIMLNPNFVKLVSWYDNEYAYSARLVDLIAVMAAKDGVVSPGTGLDRRPF 995
2 -117.000IDP91830 gene: gapA; glyceraldehyde-3-phosphate dehydrogenase A [Escherichia coli str. K-12 substr. MG1655] b1779 [Escherichia coli str. K-12 substr. MG1655]  ali follow..  56  1...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MTIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARKH--ITAGAKKVVMTGPSKD--NTPMFVKGANFDK-YAGQDIVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTEDDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDLIAHISK................ 331
3 -116.000IDP04619 glyceraldehyde-3-phosphate dehydrogenase [Bacillus anthracis str. Sterne] BAS4478 [Bacillus anthracis str. Sterne]  ali follow..  44  1....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MTRVAINGFGRIGRMVFRQAIKESAFEIVAINASYPSETLAHLIKYDTVHGKFDGTVEAFEDHLLVDGKMIRLLNNRDPKELPWTDLGVEVVIEATGKFNSKEKAILH--VEAGAKKVILTAPGKNE-DVTIVVGVNEDQLDITKHTVISNASCTTNCLAPVVKVLDEQFGIENGLMTTVHAYTNDQKNIDNPH-KDLRRARACGQSIIPTTTGAAKALAKVLPHLNGKLHGMALRVPTPNVSLVDLVVDVKRDVTVEAINDAFKTVANGALKGIVEFSEEPLVSIDFNTNTHSAIIDGLSTMVMGDRKVKVLAWYDNEWGYSRRVVDLVTLVVDELAKQENVQHI..... 342
4 -116.000IDP90703 gene: gapA; glyceraldehyde 3-phosphate dehydrogenase A [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj1403c [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  41  1...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MAVKVAINGFGRIGRCVARIILERNDIELVAINDTTDIELTKYLFKYDTVHGEFKGSVDSEGDDLVVNGKKIKVFKSRNVKDLDFAKHGAQIVLECTGAHLTMAKCQEF--IDMGVQKVIMSAPAKDD-TPTYVLGVNSELY--KGESIISNASCTTNCLGPVCRVLQDNFGIEKGLMTTIHAYTNGQSIIDAKA-KDKRRSRAAAQNIIPTSTGAAKAMKLVMPELNGKLHGQSMRVPVIDVSSVDLTAQLSRKVSKDEINEAFRKAAATNLKGILMVDDDERVSSDFITCSYGAIVASDLTQVIADDFIKVIAWYDNEWGYSSRLVDMAVYIANK............... 331
5 -114.000IDP01044 gene: epd; D-erythrose 4-phosphate dehydrogenase STM3070 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  32  1...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MTVRIAINGFGRIGRNVVRALYESGRRAEITVNELADAAGMAHLLKYDTSHGRFAWEVRHEREQLFVGDDVIRILHERTLADLPWRELGVDVVLDCTGVYGNREHGEAH--IAAGAKKVLFSHPGSNDLDATVVFGVNQNQL-RAEHRIVSNASCTTNCIIPVIKLLDDAYGIESGTVTTIHSAMNDQQVIDAYH-SDLRRTRAASQSIIPVDTKLAAGITRIFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKASEVNQLLQKAAQGAFHGIVDYTESPLVSIDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLDTTLAMAAVGFRLDASAS...... 345
6 -114.000IDP02589 gene: gapA1; glyceraldehyde 3-phosphate dehydrogenase [Staphylococcus aureus subsp. aureus COL] AAW36394 [Staphylococcus aureus subsp. aureus COL]  ali follow..  41  1...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAH--IEAGAKKVLISAPATGD-LKTIVFNTNHQELDG-SETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVATGSLTELTVVLEKQDVTVEQVNEAMKNA---SNESFGYTEDEIVSSDVVGMTYGSLFDATQTRVMSRQLVKVAAWYDNEMSYTAQLVRTLAYLAELSK............. 336
7 -113.000IDP00501 gene: epd; D-erythrose 4-phosphate dehydrogenase YPO0922 [Yersinia pestis CO92]  ali follow..  31  1...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MAIRIAINGFGRIGRSVLRALYESGRISVVAINELASAEGMAHLLKYDSSHGRFAWDVRQECDSLYVGDDIIRLIHQSEIEQLPWSELGIDVVLDCSGVYGSREDGEAH--VASGAKKVLFAHPGGHDLDATVVYGVNHQDL-RAEHRIVSNASCTTNCIIPIIQLLDIAYGIESGTVTTIHSSMNDQPVIDAYH-QDLRRTRAASQSIIPVDTKLAAGITRIFPKFCDRFEAISVRVPTINVTAIDLSVSVTHPVGVAEVNQLLQKAARGAFRGIVDYTELPLVSMDFNHDPHSAIVDGTQTRVSGQHLIKTLVWCDNEWGFANRMLDTTLAMAKSG.............. 337
8 -113.000IDP06322 glyceraldehyde-3-phosphate dehydrogenase [Streptococcus pneumoniae TIGR4] NP_346439 [Streptococcus pneumoniae TIGR4]  ali follow..  45  1...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MVVKVGINGFGRIGRLAFRRIQNVEGVEVTRINDLTDPVMLAHLLKYDTTQGRFDGTVEVKEGGFEVNGKFIKVSAERDPEQIDWATDGVEIVLEATGFFAKKEAAEKH--LKGGAKKVVITAPGGND-VKTVVFNTNHDVLDG-TETVISGASCTTNCLAPMAKALQDNFGVVEGLMTTIHAYTGDQMILDGPHGGDLRRARAGAANIVPNSTGAAKAIGLVIPELNGKLDGSAQRVPTPTGSVTELVAVLEKNVTVDEVNAAMKAASN----ESYGYTEDPIVSSDIVGMSYGSLFDATQTKVDGKQLVKVVSWYDNEMSYTAQLVRTLEYFAKIAK............. 335
9 -22.700IDP01957 putative methyl-accepting chemotaxis protein [Salmonella typhimurium LT2] STM1657 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  10  70.......................................................................................................................................................................................................EEVAAGNLSIHISEFGNNCAGRLIPGINSLSENISSQTAMTLSEQLAARSLSLSVKTEQQSASLIQTAASIDEMAASTKNNADNTRMASIQADCATQRKGGELMVRVTENMRSITDCASQMTEIISLIDGIAFQTNILAAARAGDHGKGFSVVAGEVRNLAHRSAEAAKSIKALIDVTHDNVRQGAAIVQEAEKNMQEIVGGSGQLNVLMSEISTTTREQEKGINQITLALSDLESATHSNVLMVEALSASSDVLKAQVIELQTKTDKFRLSQP.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 360
10 -22.500IDP02076 putative methyl-accepting chemotaxis protein [Salmonella typhimurium LT2] STM3216 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  10  1..........MFLHNIKIRSKLFMAFGLFIVLMVVSSALSLFSLDRAFNDFIIAQQLMLLDEEGRWSQSSQKELDEISQRITALLDELSSNRHDAASQKIITEIREARQQYLESRFRILQDIQSHNRQAAIQEMMTRTVQVQKVYKDKVQELIAVQDAQMHNAGVQVEGDFKTNRTLLITLAYIVRSITRPLDEAVRFAEAIADGDLTRHITTDYKDETGVLLQALMAMKTRLGSESISTAAAQIVAGNQDLAARTEEQASSVEETAASMEQITATVKNTADHTSEATKLSAGAASKNNGEMMNQVTQKMRVINDTANRMSDIINIIDSIAFQTNILAAARAGEHGRGFAVVAGEVRQLAQKSASSASEIRNLIEDSTSQTQEGMHLVEKASALINGMVDNVEEMDVILREIGQASREQTDGISQINSAIGLIDAATQQNSCLVEESVAAAASLNEQALHLKELVNVFRVREEDTQPA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 521
11 -21.800IDP01940 gene: trg; methyl-accepting chemotaxis protein III [Salmonella typhimurium LT2] STM1626 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  10  13LGFLHHIRLVPL---------FSSILGGILLLFALSAGLAGYFLLQADRDQR--GAASRIAEMDEMKANIAAAETRIKQSQDGFNAYMSRAVKTPADDALDNELNARYTAYINGLQPMLKFAKNGMFEAIINHENEQAKQLDAAYNHVLLKAIELRTERARLLSEQAYQRTRLGMMFMIGAMVLRRTVIQPLQQSASRIERIAAGDLTMADEPTGRSEIGRLSHHLQQMQHALGAEEIYRGTSEITAGNTDLSSRTEQQAAAIEQTAASMEQLTATVKQNADNAHHASKLAEDASGSRGGQMVSGVVQTMGNISTSSKKISEITAVINSIAFQTNILAAARAGEQGRGFAVVASEVRTLASRSAQAAKEIEGLIGASVSLIEQGSEEVIAAGSTMNEIVDAVKRVTDIMLDIAAASDEQSRGIVQVSQAISEMDRVTQQNASLVEEASAAARSLEEQAARLTQAVDAFRLHDTGATMRSS................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 539
12 -21.500IDP02460 gene: cheD; methyl-accepting chemotaxis protein [Yersinia pestis CO92] YPO1675 [Yersinia pestis CO92]  ali follow..  12  230.......................................................................................................................................................................................................KHIANGDLTQNIEVHGRNEVGTLAASLKHMQSELGADAIYSGASEIAVGNNDLSARTEQQAASLEETAASMEQLTATVKQNAENARQASQLALSASEQKGGKVVADVVQTMHEIAGSSQKIADITSVIDGIAFQTNILAAARAGEQGRGFAVVAGEVRNLAQRSAQAAKEIKGLIDDSVNRVDLGSVLVESAGETMGDIVNAVTRVTDIMGEIASASDEQSRGIDQIGQAVAEMDRVTQQNASLVEESASAAASLEEQASMLTQAMSVFVLSVDNSNSTSDVRKVKQPTQEMNSTAKKALGNNLQDN......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 553
13 -21.400IDP01089 gene: tsr; methyl-accepting chemotaxis protein I STM4533 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  12  230.......................................................................................................................................................................................................RHIASGDLVKRIDVEGSNEMGQLAENLRHMQSELGANAIYSGASEIAMGNNDLSSRTEQQAASLEETAASMEQLTATVKQNAENARQASHLALSASEQKGGKVVDNVVQTMRDIASSSQKIADIISVIDGIAFQTNILAAARAGEQGRGFAVVAGEVRNLAQRSAQAAREIKSLIEDSVSRVDVGSTLVESAGETMDEIVNAVTRVTDIMGEIASASDEQSRGIDQVGLAVAEMDRVTQQNASLVEESAAAAAALEEQASRLTQAVAVFRIHQQQQRAREVAAV................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 530
14 -21.200IDP01047 putative methyl-accepting chemotaxis protein STM3152 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  13  219................................................................................................................................................................................................ERIRQQFQRIAQGDLSQPIEALGRNCVGRLVPLLRAMQDSLGSDNIWRGATEISTGNNDLSSRTEEQAAALEETAASMEQLTATVKMNAEHARQASQLADAASLGKGGELVSDVVETMNGISASSQQIAEITTVINSIAFQTNILAAARAGEQGRGFAVVAGEVRNLASRSAGAAKEIEALIGESVRRVAQGAQLVQETGATMDAILRGVTEVTTIMKQIASASEEQSKGISQVGVAITQMDSVTQQNAALVEQVSAAAAALERQTEDLQRSVQQFRLSASEPQ....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 519
15 -21.200IDP02090 gene: tcp; methyl-accepting transmembrane citrate/phenol chemoreceptor [Salmonella typhimurium LT2] STM3577 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  10  214........................................................................................................QRVLLRPLQRIMAHIQTIADGDLTHEIEAEGR-SEMGQLAAGLKTMQQSLIRTVSAVRDN---------------------ADSIYTGAGEISAGS-------------------------------------------------SDLSSRTEQQASALEETAASMEQLTATVRQNTDNARQATGLAKTASERKGGRVVDNVVSTMNDIAESSEKIVDITSVIDGIAFQTNILAAARAGEQGRGFAVVAGEVRTLASRSAQAAKEIKVLIENSVSRIDTGSTQVREAGETMKEIVNAVTRVTDIMGEIASASDEQSKGIEQVAQAVSEMDSVTQQNASLVEESAAAAAALEDQANELRQAVAAFRIQKQPRREASPTTLSKGLTPQPAAEQAN.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 543
16 -20.700IDP02783 gene: asd; aspartate-semialdehyde dehydrogenase [Francisella tularensis subsp. tularensis SCHU S4] FTT0425c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  14  1....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MLKVGFIG-GMVGSVLMSRMIESKDFDCILP--------------------TFFSTSQVGQLPTGFMQQYGALQDAYSIDQLS----SMDILLSCQGGEYTKEIHHK---REAGWQGFWIDAASTDKDSTLVLDPLNHDQIINNGKKDFIGSNCTVSLMSLAIAGLLKEDLVEWVNSSTYQAISGAELSKDSSKIPQQKTVQTLAYNLLPMPSGQTKEEYKAATELNKPVDGICVRVPSLRSHSQALTVKLRQKLTIEEIKQKISQGNEWVKVIDNNKEDTLKYLTP-NSGTLDIAIGRIKSSLLADDIFHCFTVGDQ--GAAEPLRRVLNII.................. 362
17 -20.200IDP02252 gene: tsr2; putative methyl-accepting chemotaxis protein [Yersinia pestis CO92] YPO1229 [Yersinia pestis CO92]  ali follow..  11  299..........................................................................................................................................................................................THIQQAMDAISSGS----ADLTQRLPIEGRDEVAQIARSFNQFADKLTSESVRVAANEIAAGNQDLSGRTESAAASLQQTSAALEQISATVAQSASAARQANNAVFSASESRGGDVITKVITTMESIEKASGKIGDITSVIDGIAFQTNILAAARAGEQGRGFAVVAGEVRILAQRSAQAAKEIKALIESTVSSVASGSSQVRQASNAMTDIVSSVSDVTTIMSEITNAADEQMRGIHEINSAVAQLDTMVQQNAALVQESTAASAALQAQAADLTDTVNQFK.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 594
18 -20.100IDP90899 gene: asd; aspartate-semialdehyde dehydrogenase [Yersinia pestis CO92] YPO3949 [Yersinia pestis CO92]  ali follow..  14  1....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MKNVGFIG-GMVGSVLMQRMIEERDFDGIRP----------VFFSTSQHGQA----------APAFAGHQGTLQDAYDIDALS----ALDIIITCQGGDYTNQIYPK---REIGWQGYWIDAASSQDDTIIILDPVNHDVIKQKGIKTFAGGNCTVSLMLMSLGGLFANNLVEWASVATYQAASGMGMLHAGVAKELQDPASAIAGSLIPLDNGQSREEWKGQAETNKPVDGLCVRVGALRCHSQAFTLKLKKDVPLAEIEQMLATHNDWVRVIPNDRELSMRELTP-VTGTLNTPVGRLRKLNMGPEYLSAFTVGDQ--GAAEPLRRMLRIL.................. 366
19 -17.800IDP02042 gene: asd; aspartate-semialdehyde dehydrogenase [Coxiella burnetii RSA 493] CBU_0875 [Coxiella burnetii RSA 493]  ali follow..  15  1.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MAAVYDVAVVG-GVVGEMILQLLDERQ------------PVGKIYPLASERSEGK---RISFGGKQKKVGNLATFDFS------------KVQFAFFSAGAERSAEYAPR---AEAGCIVIDNTSHFRETDIPLVVPEVNAQALENRYRNIIANPNCSTIQLVVALKPIYDAVGIVRVNVATYQSVSGTAHLLNGQPITSSVFPLQIAFNAIPEEMKMVWETQKIMGDPNLLVNPTAVRVPVFFAHSEAVHIETRDPISPEEVKERLSQAPGII---VIDKENTYPTAISHAVNADAVFVGRIRRDISHPNGLDLWIVADN--GAALNAVQIAEVLINEDFYS........... 340
20 -17.200IDP90223 gene: Asd; Aspartate semialdehyde dehydrogenase Asd SA1226 [Staphylococcus aureus subsp. aureus N315]  ali follow..  16  1....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MTKLAVVG-GLVGTKMLETLNRKPFDELVLFSS------------------------RSAGQEVEFQEKTYTVQELTDARASE----HFDYVLMSAGGGTSEHFAPL---EKAGAIVIDNSSQWRAEDIDLIVPEVNEPTFTR---GIIANPNCSTIQSVVPLKVLQDAYGLKRVAYTTYQAVSGKDLAEGVNGKAPEAYPHPIYNNVLPEEQKMIDETRKILNAPDLKVTATCARVPVQDSHSVEIDVTLDKETTAEDIKALFDQDDRVVL--VDNPENNEYPMAINSTNKDEVFVGRIRRDDSLENTFHVWCTSDN--GAALNAVQVLEQVMRLKGAN........... 329
21 -16.700IDP90732 gene: asd; aspartate-semialdehyde dehydrogenase [Campylobacter jejuni subsp. jejuni NCTC 11168] Cj1023c [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]  ali follow..  13  1.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MSKKQKIAIVG-GAVGEELLNVLDELPVESILPLASA-----------------------KSVGSEVEFKGKAYKV---KELTENVFKENPIDIAFFSAGGSVSEKYAKF---VESGAVVIDNTSHFREKDVPLVVPECNPEDIKDKKTGIIANPNCSTIQMVQVLKPLNDAFNLKRVDVSTYQAASGAKEGMQELVEAMQS-PYTLALNLIPMDNDYTKEELKMVNETQ-EVSATCVRVPVLRSHSEAITMHFEKEIDVKKAKEILKKAPSVIV--IDDPKNKKYPMPLMTSDTNETYVGRIRADVYDKKILHLWCVADQ--GAATNAVRIAQKWLELKN............. 342
22 -16.700IDP04599 aspartate-semialdehyde dehydrogenase [Bacillus anthracis str. Sterne] BAS2268 [Bacillus anthracis str. Sterne]  ali follow..  15  1................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MSEKGYHLAVVG-GAVGQKIIELLEKETKFNIAEV----------TLLSSKRSAGK---TVQFKGREIIIQEAKINSFE------------GIDIAFFSAGGEVSRQFVNQ---VSSGAIVIDNTSEYRMAHDVPLVVPEVNTHTLKEHKGIIAVPNCSALQMVTALQPIRKVFGLERIIVSTYQAVSGAKSILAGEEAKKDKKHYPIAFNVLPEEVKMIQETKKILEDPNLKMAATCVRVPVISGHSESVYIELEKEATVAEIKEVLFDAPGVIL--QDNPSEQLYPMPLYAEGKIDTFVGRIRKDPDTPNGFHLWIVSDN--GAAWNSVQIAETMAEE............... 344
23 -15.300IDP02467 gene: asd-2; aspartate-semialdehyde dehydrogenase [Bacillus anthracis str. `Ames Ancestor`] GBAA3937 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  13  2................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................EKQKTFHVAVVG-GAVGEQMLNTLEKRPIGKLTLLSS------------------------RSAGKKLVFKGEEFTVQEATPES-------GVDIALFSAGGSVSKQLAPE---AKRGAIVVDNTSAFRMTENVPLVVPEVNENDLKEHNGIIANPNCSTIQMVVALEPVRQQYGLKRVIVSTYQAVSGAAAAIEELHEQSQANGEEVKANVLPVSGDKFPIAFNAIPQIDKEVAATCVRLPVVSGHSESVYIEVEKEGVTVEELKSLLANAEG----LQDNPEEQLYPMP-AVGKNEVFVGRIRKDLNNDKGFHLWVVSDN--GAAWNSVQIAERLVKLQ.............. 346
24 -15.200IDP00998 gene: usg; hypothetical protein STM2369 STM2369 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  14  1.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MSEGWNIAILG-GAVGEALLETLAERQ-GEIYALAR------------------------ESAGEHLRFGGKSVIVQDAADFD------TQAQLAFFVAGAEASAAWIDD---TNAGCLVIDSSGLFAEPDVPLVVPEVNPYVLADRNRNVIAVADSLTSQLLAALKPLIDQGGLSRIAVTSMLSASAQDALAGQSAKEDDFFGRQLAFNMLPLLPDRVDEVRKILQDDGVMISASVVQSPVFYGHAQMVSFEALRPLAAEEAREAFSRGED-----LSEETDYPTQVGDASGNPQLSI-GCVHNDYGMPEQIQFWSVADN--GGALMAVKIAEKLVQE............... 334
25 -15.100IDP91521 C2 domain-containing protein [Toxoplasma gondii ME49] TGME49_040910 [Toxoplasma gondii ME49]  ali follow..  10 1141.....RATRNLPTK---WNRDDVLDAFLQMGLELL-AFYSKVPCSYRVRGFSLPCVTQKVTERERRRILAQKEKQSREDAQRKARKQRRKAGHEGADNGAEDKQGAEGNEEEHGDAAAAAVAEESVSAEAVQGDEEPKKVVKKGAVPRVKKRSYDQVEGTEVAAIAIERDFFTEAEAPDFKNLMDVEHAINTHLGLSPGRVRAFQARYAEKRIVFAVGPPMDDATEADAVSSVALMEKLRDILPSMAHEEGRFQEVTGGGATLQWDGPGTNILDRIAQEQATAGEGEQQTSEGIPTRDMQVDGTAVLEEAGEKSDKKKKKKEKKEKKEKKEKKEKKEKKEKKKKKGGETAAEPEEASAVLAPPPVPVPAAAIPSVLLPADSEDGEKEQPKEKKKEKKEKKKKKD-----GETDAEPEEASAVLAPPPVPVPAAAIPSILLPTDGEDGEKEKTKEKKTEKKKEKHTEKKHKKKSEALPESETTAVVTVTPGEEDETSPLVPVPSSIASSEAPEPPASTAPEPKAKPGLSMGAALLAVRARSRLQRKHLAQQLSSSSSSEVSASSASSLSPSSSSSSDFAETRAKADALRARLQAAQARLAAARETEVSSSETESSETSEASFLSSDGEWDALWQSQRAAAMERQQRLQKMVSG-----KAAYRRLEEENTRLAATRRRDDKLQRQVEAERERAVELLKEATRRAKEEK--------DLIARQPPPARDWS----DTVVLSTPQIFVNSQAACAPFADSGRDE------GGRDEWYEVSDACSRRAESSNESRTTAGAKLRQQ-LA............................................................................................................................................................................................... 1987
26 -15.000IDP00107 gene: argC; N-acetyl-gamma-glutamylphosphate reductase NT01SF4834 [Shigella flexneri 2a str. 2457T]  ali follow..  12  1....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MLNTLIVG-GYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISHPQLKGIVELPLQMSDISEFSPGVDVVFLATAHEVSHDLAPQFLEVVFDLSGAFRVNDATF---------EKYYGFTHQYPELLEQAAYGLAEWCGNKKEANLIAVPGCYPTAAQLALKPLIDADLLDLNQWPVINATSGVS----GAGRKAAISNSFCEVSLQPYGVFTHRHQPEIATHLGADVIFTPHLGNFPRGILETITCRLKSGVTQAQVAQALQQAYAHK---LVRLYDKGVPALKNVVGLPFCDI----GFAVQGEHLIIVATEDN--GAAAQAVQCANIRFGYAETQ........... 331
27 -14.600IDP90617 gene: argC; N-acetyl-gamma-glutamyl-phosphate reductase [Yersinia pestis CO92] YPO3927 [Yersinia pestis CO92]  ali follow..  14  1....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MLNTLIVG-GYAGAELTAYLNRHPHMNITGLAVSAQSADAGKLLSHPQLKGILDLPLQLVDVAQAAKGIDVVFLATAHEVSHDLAPQFLAVVFDLSGAFRVRDAAF---------SQYYGFEHQHPDWLDKAVYGLAEQSEDIKQAQLIAVPGCPTASQLALKPLVDGQLLNDAQWPVINAVSGVS-----GAGRKASMGNSFCEVSLQPYGLFTHRHQPEIVTHLGTPVIFTPHLGNFARGILATITCRLKAGVTAQNIADAYHHAYQNK---LVRLYQQGVPALAVVGLPFCDI-----GFSVQGEHLIIVATEDN--GAAAQAVQCMNIRFGFPETQ........... 331
28 -14.500IDP92687 Ser-Asp rich fibrinogen/bone sialoprotein-binding protein SdrE [Staphylococcus aureus subsp. aureus str. Newman] YP_001331559 [Staphylococcus aureus subsp. aureus str. Newman]  ali follow..  7  1..................................MINRDNMISNRLSIRKYTVGTASILVGGLGNQEAKAAENTSTENAKQDDATTSDNKEVVSETENNSTTENNSTNPIKKETNTDSQPEAKKESTSSSTQKQQNNVTATTETKPQNIEKENVKPSTDKTATEDTSVILEEKKAPNNTNNDVTTKPSTSEPSTSEIQTKPTTPQESTNIENSQPQPTPSKVDNQVTDATNPKEPVNVSKEELKNNPEKLKELVRNDSNTDHSTKPVATAPTSVAPKRVNAKMRFAVAQPAAVASNNVNDLIKVTKQTIKVGDGKDNV..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 300
29 -14.300IDP92699 Ser-Asp rich fibrinogen/bone sialoprotein-binding protein SdrE [Staphylococcus aureus subsp. aureus USA300_TCH1516] YP_001574462 [Staphylococcus aureus subsp. aureus USA300_TCH1516]  ali follow..  6  1..MINRDNKKAITK-------------------------GMISNRLSIRKYTVGTASILVGGLGNQEAKAAENTSTENAKQDDATTSDNKEVVSETENNSTTENNSTNPIKKETNTDSQPEAKKESTSSSTQKQQNNVTATTETKPQNIEKENVKPSTDKTATEDTSVILEEKKAPNNTNNDVTTKPSTSEPSTSEIQTKPTTPQESTNIENSQPQPTPSKVDNQVTDATNPKEPVNVSKEELKNNPEKLKELVRNDSNTDHSTKPVATAPTSVAPKRVNAKMRFAVAQPAAVASNNVNDLIKVTKQTIKVGDGKDNV..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 300
30 -13.800IDP91343 methyl-accepting chemotaxis protein [Vibrio vulnificus CMCP6] VV2_0072 [Vibrio vulnificus CMCP6]  ali follow..  11  40VAGYTLEELMGQPHNIVRHPDMPPE--AFKDLWEHLKAGK-MVKNRCKNGYWVDAFASPIKDSSG---KVVEYQSVRLCPSRENVENATRLYAQIRAGKTPIQLKLPRTRLWQRQSILFFGATLLSLAFNTALP----GLGIWSLLLLSVAISYSSTRRLESLSAEARKVFDNPMELVYNKKVDDISEIKLALKMRQSELNAVVGRIQDSNQ------------------------QLIDSARNSSSNSDKASHNLKGQTHETEQVAAAITEMHSTANEIAQNAQSASDATDQAHSAASAGQLDETSDVVSQLAQHGKTIGDVLIIIQGVAEQTNLLAAARAGEQGRGFAVVADEVRKLAQRSHESTEEIQKVIGLGTHLAEQCVSSADSSGQKLQILLDQVTDISDRNNQIATAVEEMARVTEDMSSSVQSISDACSATNVLSSDTCHQCNALVKSLDSQGKLVSQFR.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 517
31 -12.800IDP00139 gene: argC; N-acetyl-gamma-glutamyl-phosphate reductase BA_4355 [Bacillus anthracis str. Ames]  ali follow..  12  1.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MKVAIIG-GYGGIELIRLLEQHPYFSIASLHSFSQVGECITNV-YPHFQNVLVHTLQEIDVEEIEKEAEIVFLATPAGVSAELTPKLLAKVIDLSGDFRMKDPFI---------EQWYKRAAAKEGVLREAVYGLSEKRSEIQKANLIANPGCFATAALLAILPLVRSGIIEEDSIIIDAKSGVSGAGKTPTTMTHFPELYDNLRIYKVNEHQHIPEIEQMLAEWNRPITFSTHLIPISRGIMVTLYAKVKREMEIEQLQQLYEEAEQSAFIRIRMQGEFPSPK-EVRGSNYCDM---GIAYDERTGRVTIVSVIDN--GAAGQAIQNANIVAGLEETT........... 336
32 -12.700IDP01485 hemolysin secretion protein HylB VCA0220 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  12  233.......................................................................................................................................................................................................SAAANLSLRTRLELDGNDELCDIGKSFNAFIDKVNSKELATMASSVSQRAHMTQSNCASQRDRTVQVATAIHELGATVSEIASNAAMAADVAKQATLHSGVNELDNATQVVSSLATQINGISSTLDTIRSISEQTNLLAAARAGEQGRGFAVVADEVRTLASRSAASTEEIQQVINRGRSQSDVVVEFSAKANQSLTEINSQIDQINDQNIQVATATEEQSTVVEDINRNVEDINQLTTETSHVADELSRASASLQRLSSQLDKLVGSFE.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 547
33 -12.700IDP04179 methyl-accepting chemotaxis protein [Vibrio cholerae O1 biovar eltor str. N16961] VCA0068 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  9  232.......................................................................................................................................................................................................REIAKGNLLVKAQEEGNNEITLLARDVNATVTQLISTDVASASTELATVMTQASVNSDQEKQEVEQVASAVNQLQSTAQSVTDHAHSADGAAQQANQLASADQLREAAQVVNQLKEQSERIGNVTEVIRSISEQTNLLAAARAGESGRGFAVVADEVRMLAARTQTSTQEIQAIIEESLSLLEQNQSLAAKVSASLTEINHSISALGQINAQVATASEEQSQVTKDINRNLSNIYELVSQNVTGITQSAAASHELSDLAEQQHQQLQYFR.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 546
34 -12.500IDP90276 patatin-like phospholipase domain-containing protein [Toxoplasma gondii ME49] TGME49_032600 [Toxoplasma gondii ME49]  ali follow..  15  4......NSVSLRS----------LSLCLLFSLLLF----SFCMDTRS-------SAT---DGAD--------KAESAVSAAPESAEEPSGEDASESSGEDEEDSEEEDENEDEDFSSLFGSLGGG------GFGRGLDNLQGMSGLFDNLGTDSDGEHKLGNLASLLPNLG-----MIGKGGGDGKEELAELLSKASAQQNSGTNQVSP----------DFVNQIFSMLSKNNTALNDIMSEFMQDPYMDIKETERPKIDPEVFANPPAQTDNAAGNAKDGETPESSPAEAYASDAATADGPEEIILSKIKKFVKKPGDRDADNAAADPFAETNDAGVCHILVLSGGGARSAFQ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 299
35 -12.300IDP95280 methyl-accepting chemotaxis protein [Acinetobacter baumannii ATCC 17978] YP_001085820 [Acinetobacter baumannii ATCC 17978]  ali follow..  11  277.................................................................................................................................................................TLRSVMDKQRVARLQEEYDRNQNAILRLLDEIADLADGDLRSYATVSEDFTGAIADSINFAIDQLRDLVSRIHETSQERYTQDTQSITNQLAEASEHQAQEIAGASTAMNEMAQSIDQVSANASESAEVAQRSVQIASNEQIQETSKRIKRLGESSQEIGNIVSLINDIADQTNILAASMAGEAGRGFAVVADEVQRLAERSASATKQIETLVEQTTTEVVRGANLAKDAGIALDEIQKVSGDLAKLIASISDAAKLQSASASHIATTMTVVQEITSQTTTATFDTARSVSELANMAESLRESVTDFKLP............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 624
36 -9.990IDP91038 hypothetical protein SAHV_2481 [Staphylococcus aureus subsp. aureus Mu3] SAHV_2481 [Staphylococcus aureus subsp. aureus Mu3]  ali follow..  8  13.......................................DFLSNKLSIRKFTVGTASILIGS-TQQEAEAAENNIENPTTLKDNVQSKEVKIEEVTNKDTAPQGVEAKSEVTSNKDTIEHEASVKAEDISKKEDTPKEVANVAEVQPKSSVTHNAEAPKVRKARSVDEGSFDITRDSKNVVESTPITIQGKEHFEGYGSVDIQKNPTDLGVSEVTRFNVGNESNGLIGALQLKNKIDFSKD--NFKVRVANNHQSNTTGADGW............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 242
37 -9.960IDP92013 adenosine monophosphate deaminase, putative [Toxoplasma gondii ME49] TGME49_034280 [Toxoplasma gondii ME49]  ali follow..  14  432LAVSPLSNNAL--------AKNPLCSFFKIGLNVSISTDD--PTDEPLNSVNVSN--IRLQYRLRIALSRPFSPAVHPATCPPSVSPRSALLPEKSEPTFAAFEDAFEPGNEADEPAQVLRVAAPENFRAAERETKAET-GGDNGATEKTTRASLVFDREQEELHASHSITVSPPDSAEGTEKDGEKKARLGLRSPKTGSDSESPGLLEVAEESAVMDLGEIPGGVSSPMPRSESFEVLDGPSREALQTLDAYTHLEAREENVDVLKVALTSQRSPALLSGS-GTGRTLRRASMDESDGRRRSGAGLLQLLTSPLLQQQLSHASSVI--VGEYANSTAEGDEERRGDSEGDPDDAKRSENEKETEEAK................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 914
38 -9.440IDP95064 methyl-accepting chemotaxis protein, partial [Campylobacter jejuni] AGM39603 [Campylobacter jejuni]  ali follow..  8  35.......................................................................................................................................................................................................................................KNKITSLEQAALESKLKTDLLNVLLTGVLKNITIIQGDMLENVNKAEVISSYSKTSLAEMDELNHRNITESANKTRDVAGTLHRSVDEITNVINLIKDVSDQTNLLAAARAGEHGRGFAVVADEVRKLAEKTQKATTEVEMNIEQVEKISIDSNAHIMSFSEKFTHLVNEAHSTNSNAVGIASEAFVSLAKLDHIAFKLNGYKEIFSKSGKQLADHTS.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 281
39 -9.170IDP01046 putative methyl-accepting chemotaxis protein STM3138 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  8  8.......................................................................................................................................................................................................................LRHWNNNVVKIPPPAAESGANASDVVVDTPEPYERILCQKILMGISTIDIIRNAIIKSCEQLNIEKERINELNEQNDKARSSLKSTTSSDIGCRMGDLNTSLTQINACIKEIQKIANQTNLIAAARVGDAGRGFSVISKEVKNLSEDVKHSSKSVSTLTSVIKDNTARVSEVLDNQQPVIDNITTNINQIVESIGIVIDKSLSMKSVMQYISTVQ..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 237
40 -9.010IDP06012 membrane-attack complex / perforin domain-containing protein [Toxoplasma gondii ME49] EEB00555 [Toxoplasma gondii ME49]  ali follow..  9  1.................................MLLS-----PTESRLQH-TTRYLPIRSHVLQSERIESPEALNEVPTKVERNEFTEKGDKTEQVLTAQADHKSLLEGRSVRLESTSTAPDDDDFLFEDDTPKKPKSRVNKGTSSDETSPGDRSSGEGSSDSDSLLSVVHRTKGNATQANKNQTRIT-AQHQKKVTKKQGIPGSDSLGTSSADFDFDIDSSSNTQADDSQRQSLGDSSALDLFGSDTGDTGDIFGFSNSSSDGGNAAANDGGLFSSSGMGPTGASDETSANPLGSILGGVL..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 280
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.