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Query: IDP92118 adenosine/AMP deaminase domain containing protein [Toxoplasma gondii ME49] TGME49_015480 [Toxoplasma gondii ME49], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTTHVALESSPWKNAAVAPNGVANAARLSAPVYENGRSSTTNVDFLWRADCCCCCGHGVPVDLLLEYAHKIPKVELHVHMEGTLEATLAKEIATKNGVPMGSAGEEAFNDDENGIAFGDLNSFLAAYFHRESVLRHREDIYNVVLRYFEKSAAQNVRHIELLFDFQSPFRQTPPRDALQGMYDACLEAEKRWGVTSRRILCFIRSFPLKKHLECVEMVTPYMSLFDGFGLAASELGHENYKFRKVFDLVKQKGFPCVAHAGEEGPAQNVIDALLHNHAARIDHGTSAVEDPGLLKHLVANQVPLTVCPLSNVCLGVCRNLEEHPLLRCMPKCSLESETPNGVSHEVFQSQRDRLRCEQLDKLKAADKDPKCALGVPDPVPYVAGQPAAEAISLGPKRVTGSRIGVQFESLIDQGLQVTINSDDPAFFGGGMNENFRGIIETCRVKENACTGMAADDSNGGTPLLKESLHWRLDTIKTVVLNSVYAAFLPLEKKQALAQEVESFDAEFRKKHRIATLast
1 -142.000IDP92118 adenosine/AMP deaminase domain containing protein [Toxoplasma gondii ME49] TGME49_015480 [Toxoplasma gondii ME49]  ali  100  1MTTHVALESSPWKNAAVAPNGVANAARLSAPVYENGRSSTTNVDFLWRADCCCCCGHGVPVDLLLEYAHKIPKVELHVHMEGTLEATLAKEIATKNGVPMGSAGEEAFNDDENGIAFGDLNSFLAAYFHRESVLRHREDIYNVVLRYFEKSAAQNVRHIELLFDFQSPFRQTPPRDALQGMYDACLEAEKRWGVTSRRILCFIRSFPLKKHLECVEMVTPYMSLFDGFGLAASELGHENYKFRKVFDLVKQKGFPCVAHAGEEGPAQNVIDALLHNHAARIDHGTSAVEDPGLLKHLVANQVPLTVCPLSNVCLGVCRNLEEHPLLRCMPKCSLESETPNGVSHEVFQSQRDRLRCEQLDKLKAADKDPKCALGVPDPVPYVAGQPAAEAISLGPKRVTGSRIGVQFESLIDQGLQVTINSDDPAFFGGGMNENFRGIIETCRVKENACTGMAADDSNGGTPLLKESLHWRLDTIKTVVLNSVYAAFLPLEKKQALAQEVESFDAEFRKKHRIAT 515
2 -91.900IDP00965 gene: add; adenosine deaminase STM1463 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  22  3...................................................................DITLPLTDIHRHLDGNIRAQTILDLGRQFNIALPAQTLETLIPHVQTSTEPDLVSFLTKLDWGVKVLASLDACRRVAFENIEDAARNGLHYVELRFSPGYMAHQLPIAGVVEAVIDGVRDGCNTFGVEARLIGIMSRTFGEAACLQELDALLAHRENITALDLAGDELGFPGSLFLSHFNRARDAGWHITVHAGEAAGPESIWQAIRELGAERIGHGVKAVEDRALMDFLAQQRIGIESCLTSNIQTSTVASLADHPLKT----------------------------------------------------------------------------------FLEHGVLASLNTDDPAVQGVDIIHEYHVAAPAA--------------------------GLSREQIRQAQINGLEIAFLSDSEKRALREKVAEA............ 333
3 -90.400IDP04388 adenosine deaminase [Vibrio cholerae O1 biovar eltor str. N16961] VC2751 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  22  2..................................................................ITSSLPLTDLHRHLDGNIRTQTILELGQKFGVKLPANTLQTLTPYVQVEAEPSLVAFLSKLDWGVAVLGDLDACRRVAYENVEDALNARIDYAELRFSPYYMAMSLPVTGVVEAVVDGVRAGVRDFGIQANLIGIMSRTFGTDACQQELDAILSQKNHIVAVDLAGDELGQPGDRFIQHFKQVRDAGLHVTVHAGEAAGPESMWQAIRDLGATRIGHGVKAIHDPKLMDYLAQHRIGIESCLTSNLQTSTVDSLATHPLKR----------------------------------------------------------------------------------FLEHGILACINTDDPAVEGIELPYEYEVAAPQA--------------------------GLSQEQIRQAQLNGLELAFLSDSEKKALLAKAALR............ 333
4 -83.500IDP92021 adenosine/AMP deaminase domain containing protein [Toxoplasma gondii ME49] TGME49_005720 [Toxoplasma gondii ME49]  ali follow..  18  2........................................................SPSATLPSFEEIASLPKIELHAHLFGSIRVPVLEEIRQRAAEEHKQTTESCYNVARIEGKCIDIGDAFAYFSAVYEIVRRKDDIVYALRRVLEDFSQDNVVYLELRTTLKTIPEGIDPDNYVALLVEELKSAEKQYPMIVRLILSLNRSRLTSEVVKILDLVAKYPEWIVGVDIAGDPRKGNILPALMNPSGAHHGKLKVTVHTSEVEGSEKETKAVLKLAPHRIGHGCYLAVDQ--REFLLKEKICVEICPSSNMCTLNLRDLKDHPFSY----------------------------------------------------------------------------------YYGKKVAVCICTDDIGLFDTSLSKELHVLSQAY--------------------------NLSLSDVMDLQRSALAAAFCRDEDKAKIEEKFFRPH........... 365
5 -52.500IDP92013 adenosine monophosphate deaminase, putative [Toxoplasma gondii ME49] TGME49_034280 [Toxoplasma gondii ME49]  ali follow..  11  114VDTHICMQQKHLLRFIRKKYRTEPETVVAKTRDGNEQTLMELFHTEVGIGAHDASIDHLNVHALGSCFQRFDLFDVFLKTDNYIEGRFLAEITREVISDLEERKYQHVEWRL------SIYGRSRDEWTKLAKWVVKNKLSSKRVRWMVQVPRLYHVYRRLGMIRSFGLLENIFEPLYDAVRNPEEHPEVFTFLHMLVGWDSVDDESYASKYTMEGGELPKPAENPPYSYWGYYMYANIRALNEFMVARGLRALAFRPHCGEAGSVSHLATMF--LLADAINHGIMLKKCPVLQYLFYLAQIGLAVSPLSN--NALFMDIAKNPL----------------------------------------------------------------------------------CSFFKIGLNVSISTDDPLMFHFTLLEEYSVAAHTWKLSP--------------------------VDLCELARNSVLQSGFEAEFKRHWLGPKYKLGGRRGNCMRQTN 536
6 -12.400IDP00467 N-formimino-L-glutamate deiminase YPO1974 [Yersinia pestis CO92]  ali follow..  13  49......................................................................LP-PNLHSHA-----QRMMSGLAEVAG-------DPQDSFWTWRDLMYRLVQQL-----------TPEQVGVIARQLYIEMLKGGYTVAEFHY--LHHSPDGSPYNDIGEMTAQLSQAAQDAGIGMTLLPVLYQSRFIQDTESYLRQQQVIRRQLQNQGLCFHSLRAVELSQMQQILHVSDKQLPVHIHIAEQ--QKEVNDCLAWCGQRPVAHATHLDTSE--LVMLANSQAVAGLCPTTEANLGD---FPGVDYIHHQGRWGIGSDSHV--SLDVVEELRWLE................................................................................................................................................................. 336
7 -11.600IDP04464 gene: hutI; imidazolonepropionase [Yersinia pestis CO92] YPO1972 [Yersinia pestis CO92]  ali follow..  12  65......................................................................TP-IDCHTHLVFGDDRSNEFEQ--------------RLNGVSYAEIAANGGGIISTVRATRQA--SEQQLLEQALFRLKPLLAEGVTTIEIKSGGLNLESEIKMLRVARRLGELLPIDVKTTCLAAHALPPEFIGQPDDYIDVVCNSIIPQENLADAVDAFCEHLAFSPAQVERVFLAAQKAGLPVKLHAEQLSALRGA-TLAAKFHAISADHLEYATESD--VQAMANAGTVAVLLPGAYYLLRETQCPPIDLFRQYKVPMALASDANPGTSLSLRLMLNMACTLFRMTPEEALAGVT.................................................................................................................................................. 351
8 -7.270IDP00130 gene: yjjV; putative deoxyribonuclease YjjV NT01ST5659 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  10  2.....................................................................SWRFIDTHCHFD--------------------------------------------------------PPFTGDERASIQRACEAGVEKI------------IVPATEAAHFPRVLALAARFPSLYAALLHPIVIERHADDDSDKLQQALAQQQNVVAVGEIGPQFARQERFLDAQLQLAKRYDLPVILHSRRT---DKLAMHLKRQDLPRTGHGFA--GSLQQAERFVRLGYKIGVTITYPRASKTRDVMARLPLDA----LLLETDAPDM.............................................................................................................................................................................. 210
9 -7.060IDP00957 gene: ycfH; predicted metallodependent hydrolase STM1202 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  12  1......................................................................MFLVDSHCHLD----------------------------------------------------GLDYQSLHKDVDDVLAKAAARDVKFC------------LAVATTLPGYRHMRKLVGKRDNVVFSCGVHPLNQDEAYDVEELRLLAAE--DDVVAMGETGETKIRQQASFIHHIQIGRELHKPVIVHTRDAR--ADTLAILREEKVTDCGGVLHCFTDRETAGKLLDLGFYISFSVTFRNAEQLRDAARYVPLDR----LLVETDSPYLA............................................................................................................................................................................. 210
10 -6.930IDP00442 gene: trpH; hypothetical protein YPO2211 YPO2211 [Yersinia pestis CO92]  ali follow..  12  2..........................................................KELTDATTLSTAFTLYDLHSH-DGTLTPSELVIRAAQMRVGV------AITDHDTTAGLAEAAAAIEQHQLALRLI-------------------PGVEISTLWENHEIHIVGLGIDVQHVSLRTLLEAQSEHRYQRAQEISTRLEKARIVGAWEGANRLAHFARYLVELGLASN--------VGQVFKKYLAKGKTGYVPAQWCTIEQAIDAIKQSGGQAVLAHDLTAKWLKRLLAHFAEHGGAMEVAQCQQAPHERALLGQ---ARDYHLLASQGSD.................................................................................................................................................................................. 262
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Sequence clustering strategies improve remote homology recognitions while reducing search times. Protein Eng. 2002 Aug;15(8):643-9.