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Query: IDP92584 adaptin N terminal region domain-containing protein [Toxoplasma gondii ME49] TGME49_044290 [Toxoplasma gondii ME49], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MNAAGSNVSKEFFHLIKAIGEARSKQEEDRIVANEIATLKVKLNEPNISQHKMQELLIRSLYVELLGHDASFAHFHAVKMTNQTNNIKAKRLGYLACNLFLSEDNELMLLLINTIQKDLASPNILNVQSALHCVARLLTPEMLPALLPSLSSLLQHSHAAVRRKAVMAVHKVLDLKEREQERRAKLAQQKGSRASSVDEDFESEVMEGLREKMRRALCDSDPSVMAVSLHVIHRLAAKNVAAWRDLVSSLVSILKQIIDRKLPKDYEYHRVPAPWIQIKILSLLSTLAAGDQRASEEVYELLQEVMRRADAAGVNVAYAVIYECVRTIAALYPYPKLLDIAGCSISRFISAENNNLRYVGVTGLAAVVQVSPAYATQHQLVVVDCLEDSDDTLKRKTLDLLVKITNPVNVAVVVEKLLGHSRATVDAHLRANLIQKIIMLAERYSPDPRWFLETILCVLEVSGPSLPLASGGNAGARRCLSGGSTAGNLAAGLCYSTAYSLLQLVAEGPTDDEESDKAFREYAVNDMVALLERKKLVIPDVLMQVISWVLGEFGCYYHAGESVIDLLASCLERSYEDPTTQAWILTAILKLCVFYGRCASVSTVDAGSDPSKSSRPRGISCGLLHLLQKQQRQLVTPPEVQERCFRGLLLLQMVSWQVLREIFPFDASTEDVHVDRNLPFLNAFVEESVAAGGKRYVSRHQRVKEEGDRAVFAAPPKQPETVAPSLNFAPYAPPRAPSAAVVGAQARGAEGMSPSGMNGAAAVRGPEEAAEKEGGFQVHGPRRWGPTGYRSAASSVVSTTPGPSADPADSSSRASSSPQAAASVETAGRQPLASHQPRAMTARELTAAALFSGTAAAPVTRGTRSGGASFATSSLPRSPVSSSSSGGRRAAEVEGREAQARRASRGAGSEDARGEASERGGSPAADVATSSVDLLELESPGGGTEPQPHGDREDRRSAGRKSEKRETACLIDVLSLDFLQDGPEAASNGEHADKGRRTVASLLPLHTSTAEVGARWASLPGEASLSIPCVSASGVTRSCQEFLTNVLQQAIALHVVEVIGDEAIAAAQTPLGGDGVVYVHLKVKDQVASFIIKASTAQLast
1 -158.000IDP92584 adaptin N terminal region domain-containing protein [Toxoplasma gondii ME49] TGME49_044290 [Toxoplasma gondii ME49]  ali  100  1MNAAGSNVSKEFFHLIKAIGEARSKQEEDRIVANEIATLKVKLNEPNISQHKMQELLIRSLYVELLGHDASFAHFHAVKMTNQTNNIKAKRLGYLACNLFLSEDNELMLLLINTIQKDLASPNILNVQSALHCVARLLTPEMLPALLPSLSSLLQHSHAAVRRKAVMAVHKVLDLKEREQERRAKLAQQKGSRASSVDEDFESEVMEGLREKMRRALCDSDPSVMAVSLHVIHRLAAKNVAAWRDLVSSLVSILKQIIDRKLPKDYEYHRVPAPWIQIKILSLLSTLAAGDQRASEEVYELLQEVMRRADAAGVNVAYAVIYECVRTIAALYPYPKLLDIAGCSISRFISAENNNLRYVGVTGLAAVVQVSPAYATQHQLVVVDCLEDSDDTLKRKTLDLLVKITNPVNVAVVVEKLLGHSRATVDAHLRANLIQKIIMLAERYSPDPRWFLETILCVLEVSGPSLPLASGGNAGARRCLSGGSTAGNLAAGLCYSTAYSLLQLVAEGPTDDEESDKAFREYAVNDMVALLERKKLVIPDVLMQVISWVLGEFGCYYHAGESVIDLLASCLERSYEDPTTQAWILTAILKLCVFYGRCASVSTVDAGSDPSKSSRPRGISCGLLHLLQKQQRQLVTPPEVQERCFRGLLLLQMVSWQVLREIFPFDASTEDVHVDRNLPFLNAFVEESVAAGGKRYVSRHQRVKEEGDRAVFAAPPKQPETVAPSLNFAPYAPPRAPSAAVVGAQARGAEGMSPSGMNGAAAVRGPEEAAEKEGGFQVHGPRRWGPTGYRSAASSVVSTTPGPSADPADSSSRASSSPQAAASVETAGRQPLASHQPRAMTARELTAAALFSGTAAAPVTRGTRSGGASFATSSLPRSPVSSSSSGGRRAAEVEGREAQARRASRGAGSEDARGEASERGGSPAADVATSSVDLLELESPGGGTEPQPHGDREDRRSAGRKSEKRETACLIDVLSLDFLQDGPEAASNGEHADKGRRTVASLLPLHTSTAEVGARWASLPGEASLSIPCVSASGVTRSCQEFLTNVLQQAIALHVVEVIGDEAIAAAQTPLGGDGVVYVHLKVKDQVASFIIKASTAQ 1098
2 -104.000IDP92606 gamma-adaptin, putative [Toxoplasma gondii ME49] TGME49_113670 [Toxoplasma gondii ME49]  ali follow..  18  1.......MSCKLREFIRNIRAAKTAADERAVVSKECAEIRTAFKEGDGR--YRHRNVAKVLFISMLGYPTQFAQLECLKLL-ASPRFAEKRVGYLGLSCLLDEQSEVLMLATNSIKNDLQHPNQYVNGLALTALGNIGTGEMCGAIMTQVEDLLRCSNPFIRKKAALCGVRVVKRV--------------------------GDCEEKLLACLPALLADRNHGVLISACALITALAERDPSLVSTMRTHIPTLVKSLKAYAHAAEYDIAGITDPLLQCRLLRVLALLAKGDAESSASLSDVLAHVATNTEGAK-NVGNSVLYECVRTIMTIEDDPGLRVLGVNILGRFLSSRELNVKYVALGTLQQVVRVDSKAVMRHRDILLDCLKDQDLSLRRRAVEVLFCLITDDNVRGLVKELLNFLLMLNDAEFKQFVVNKIAVAASRHAPSTRWQIDTLLKLMTLGGDAVDDAITYSFVDLVV-----------------------------------STPPLHSYVVHKCYFSFQHSL-SNNAALWQAGVYCVGEFGDLLVKPEQVADLLISVADQKAKQGVLTQTLLTAAAKLAARLPSQRE--RLVGLLKRFETSNNVEVQQRSSEYMGLLEWDEWKENTSIAKLSSRRSLSSLGSGSFASLLSGRSGSAEALSPAPASRPVGDVWFDATEVPLNVGSPLAASSGRDDSEKDERNDRASQVSHGDSLFDEKPAQRNGIAAGSGKKTNDLLDLDDLLNMGYSSESRASPQGIPPHASGAPSSGAGVAGGSAVGASSGDKSIDMLADLLEGTSVSLGGGAAVATPAGNSAADMRGSTSAQGGGSLDSLFGLSPSQLSLPSGTSLSAVQSPTSADPFDSFLASSAKGVNS.................................................................................................................................................................................................................... 852
3 -101.000IDP06034 adaptin, putative [Toxoplasma gondii ME49] EEA97063 [Toxoplasma gondii ME49]  ali follow..  15  3......QSRTSLPSLIRGLRAAQQEGNDDEFLSASLQQIKEELVSASSSASVRSTALLKLAYLQMLGVDLGFATFSVVEAMSVRQLSGSGAEGRNLADEKQKQQQALSLLTTNLFKKDFNSKETHETSLALSTLAVMSTPEIAAALLPDVLLLLASSRSILRKKAAVCASRFLIQV--------------------------PALLPSSFPKLRQQLSEEETPVVTSLCSALLQLIAERPQQYLSLVPPLFHLLCASSSNKLLKIFALLAPFEPRLPLKLLRPLRTLLEQSRAKSVEVEILFEEAAAKARRTA-AAGALLANSEVAGEEPPREDDAFLRSCLRRIHALLTSADRNLRCVGVDILARLFAEKRDMIPEFRKFVLQAAEECDPTIRSRGIDLLTKTATAESFTQIAEQLVAAAGALSPASLRASFLLPVLRMGAELVEDFEWYLALLASIAVDGGESSVDSYRGRPAGAGLEE-------------EGAEPSVSGLVAEQLVDITVRVPAVRPCAALLASLICDSAGASTAPVVVRAAAWIVGEYFEYLDGNFDACRSLIRLARCLVLPPPVQQVVVSAAVKVFLGASRRRGLGQPRLCSAKEDLTRLCEVQEAMLAMLERCKAAAEGEHGSSPSSSVEVYDRVRLAEQLVRFFGPGDSETAGQGEGLRVWGVRQGAFLPVLPGAQQQVPLDASLDLSSPFFDYRRLQSQQASGARAPEALPQAPSSVGAASEVGGALNRKGDTSGDASGVGWRGGGPSSNGKKRFDVIRSAIAPGQPQG-SPGSTTSPEKPACAVSLCLNSSGPEASLVSSSVSAVSSVESPPNSGGGATAAWDMKVRKCLRPSETAQEAGVPLPLSLQLQLKGRLWQSCGGDELLRIFCCVGEVQGPTAPDAPPAVAVALCCEKAGSVETEVSEVGIVFSEADSLGLPALVPLASELKRRSERVVVKPASFSSLLCCASTAELRDWRL-EPDRQKQQRSAPFAVEIPATVGLLPLQMTEDELASFFTQAGGAVSAQHSERVAVRTRTPSP---AAGCTDTWCVSLGGGAPTSPLSVLQ-----------YLRIVACAANMFLLPQQP. 1229
4 -91.200IDP92581 splicing factor 3a protein, putative [Toxoplasma gondii ME49] TGME49_021940 [Toxoplasma gondii ME49]  ali follow..  12  2.....APSIRGVSLFIQDVRNAPSSSREQARVLQELSKIRQRFAHPKLTGYEKKKCLTKLLYIHLLGYPVDIGHAEAISLL-SSPHYSERSAAFLFCSLLLVDSPDLRSLCCSSIKKELSLQHEDFAALALDCASYISDPDAAAELFPLMQATASSASPLIRQKAYSCMLVFFRLRPSLL-----------------------PCEVWASRLGQALLFEQDLSCLLSLVNLIFHAVLQTSQLHQQLQLSAINILARILSRDVPENLFYRGIPAPWLAVRLLQLLQCFQVSGGKREVLSDEPSRREDKRRDRQQREAVALSLNEIVKTIFTATANEEERQSSSGKGDRTGGSGQHAVLYEAISLSTHLADADKDLKLSAAALLCSFVEEGDSNFRYKSLSLVAAMAADPDVHPELKGAVPAILRHRDAETLPNISAHIAVLVETYAPDPTWLVDVAFQMLQRAPQHSLQTN---------------------------------------------ETETNSQGGKRIPRRSVDQTSSCKDQAVLQNFWKMRFLTNLFSGPPFTFIPLNDEA-PAASCCPLLPLLLFALVKLAHAFPADSA--PVLQVLQELHDSRDLELQTRAVELSALLELPD-----------------RQFVAQTLALL-PPYRRRQLLSRPPPPRALAGSGGGRTTRAGANRAAEERLSAHLRAAPAATREAVAAVFSSSPRATGRSCETRGRRGSSRSPQRESFERERSSSESSPSRESSDGNSESDRDSRDTGEESGEETGGRQSEDRRGGREERERGRRSSDSSGAGRSVESAESEEEREHESRGSSRSVEREEEERRMQEKFMELLKSHPLPQSQNPEDQNRELWKRACIASEGTLCLLPGLLEVYVHRKFDKKDGMLLLEWRNLSRDKLLGLQRQVQLCPLKGRLRVEKTSSLSFSVFTLLRRWGTARVFETSAGGETSRLASPVAPRRVYACPLPQQIQLPLSLPVVMANFLVPAKAVNEVFLRYWKQLLSREEEREGEKVIVGPLALPPHQVPLFLSAGFKFH-VIKVGRSLCGSGTFHTGTPAASMCTVELNPNVARITVRAAHPR 1242
5 -83.800IDP92583 beta adaptin protein, putative [Toxoplasma gondii ME49] TGME49_040870 [Toxoplasma gondii ME49]  ali follow..  13  1..................MTDGNYFQPA---KRGELHELKEELHSSN--KEKKKEAVKKVIAAMTVGKDVSSLFPDVVNCM-QTTNMELKKLVYLYVINYAKAQPELAILAINTFRKDSLDPNPLIRALAVRTMGCIRLEEITEYLVEPLRRSCKDPDPYVRKTAAICVAKLFSIRPDMVGE------------------------EGFIEELTTMLSDSNPVVVANAVAALSEISENSGRNY-------MKNILNAKESNVNKLLAALNECTEWGQVFILDALAQFEPETPRAAESVLDRVTARLSHANSA-VVLSAIKVVMKLLDKVTNPDVVRAVHRKLCPPLVTLLSAEPEIQYVALRNIELIVQKRPSILASEVKMFF-CKYNDPVYVKIEKLDILVRLVSEKNVDQVLSELKEYA-TEVDVDFVRKAVRCIGRCAIKLDCAAERCVAVLLDLIQTKVNYVVQEAIVAIKDIFR-----------------------------------KYPNQYESMISTLCENLETLD---EPAAKASMVWIVGEYVDRIDNADELLETFLETFHD--EPSIVQLQLLTATVKLFLKKPAHTQDLVTKVLKMATEETYNPDLRDRAYIYWRMLAR----------------------NPEAAKKVVFAPKPPINEDADALDYNTLDRLIGNISLLSSVYHKAPETFVARAMPPSAALPKEVGSCSSDGESTDARVEQAKQSMQKQHYSSDEKEEESSPTSSEDSDSDSDGPTDLLGLSDEATPRKRSSKESSDDLFDLSSPPEDPRGVGKTLVLAADRPGNQGRTGLQVSAALTRAHGRIQLHLTLANKSSMTLNGWAIQFNRNSFGLAPAANLQVADLLSGQSAETTVPVVPGQLMSNAAPEQPLSLQVAVKTNLDIFCFTVPFDLSV-------------------------------------------------------------------------VLQENSSADKDVFRQRWQNIGEARQSSLMASAPSSQSPQAVTKQMQ----AANISLVRSADTFDALYFSATTTNNLVVLAEVSLQRNGVKLVTRSEAAA 905
6 -79.000IDP06032 beta-adaptin-like protein, putative [Toxoplasma gondii ME49] EEB01577 [Toxoplasma gondii ME49]  ali follow..  13  1MAAASPSAPPPPPPTHHVVVPRPPAGPQVDQKRGELYELRQVLRSTERDVTKQRDALKKLIAYMTVGLDVSRLFADVVMLA-STADLVQKKMIYQYLTNYADTNPSLSLLAINTFQKDCNDEDPRLRGLALRSLCSLRLSCMLEYIEPAARKGASDPSPYVRRAAVMGMLKVCKLLQELMATDEESSL---------------QRIDEIRQRLHEALFDDDPQVTINAICALNELEAETGG-------------LQVTKKIATHFLNRIKRFSEWGVCVILNLVASYQPETEEEAFDVMNILDDKLKSSSAAVVLGCANCFLELTRGNAE--LRKQVYCRLKPPLLTLATTGYPEIAHTILRHILLIVQTGGEDIFAGESRQLFCRYTDPSYLKATKLQTLAAIATENNCVDMIAEIREYV-CDADADIARQSLAALGVIACRIPSAADDVVTLLLSFVEMELADFLASAAFVILRDILR----------------------------------KYTKMISRLVEAIRIYALR---LSDGEGVAAVVWMLGEFSKNIDDAPYILEEIVDRFDEE--PPVVRMELLTAATKTFFNYPGEMQPILGKLLEKAVNDTSNPDIHDKALFYYRFLKTSLQARRILSTPLPPAEELESSADRELSERLLEEFNSLAVVYRLPSSAFLCVSPIPFRGKLALPANASAAKRGALAPALFLDGREGRGTEREQERDQQRERARERARERGENDLDALEVRHESFRESDERRHLSEESQGEQRGRSNQLGDLLLALEADTAADLLDRQREDSRDNGARVSSGASREAPASDRLRLASSVTLDSAT....................................................................................................................................................................................................................................................................... 772
7 -57.300IDP06029 adaptin N terminal region domain-containing protein [Toxoplasma gondii ME49] EEB01203 [Toxoplasma gondii ME49]  ali follow..  15  10TGPLLDRASAGMRALINIVSKSECQYFEEG--HFNAAQVKKELQDAS--VESKVTAMKRLLAAHAGGADVSALLPEVVKAI-AVPDLELKRLVYLFLIQYAEGNRDLALLSINSFQKDLTDRNQVVRAAALKALASIRLLEVVQLLVISLKRAAADCSPFVRRTAAQCVVKVFALD--------------------------QDQFEELKSIVLTLLADVEVSVVGAALIAFRELCLRHSHLLLHEGESHPDDREQYLHGHYRRLQKCLLQLEPFTQVVAVDIFMRYCRLFPTDFRLFLSNLPLLLHSESSAVVVAATAALFSLLP------SATSAWQAAVHPLLRCMHTSAPDLQEPLLHTIAVLGSAAPSLFIPHVRSFFLRFSDS-PTVKQAKLKVLRSLLVSASSQYLLTEVRTYIHWPGDQALLSSSFRLLTFLALRFPGVQAASMQTFVQLLDAPSAALAAEAVLALQTLLQRQLEQQRESSARG----------------------------GQLGHLLLQLVSQFPRVHAPPARASVVWIVGQYQREVGWAADFLRQLVPKFKAE--AEEVKLQILLLALKVWAFHWLNKR----GLAGDENDRVFNPDGEDGSGAPPAATR................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 709
8 -15.600IDP90382 hypothetical protein [Chlamydia trachomatis D/UW-3/CX] CT_350 [Chlamydia trachomatis D/UW-3/CX]  ali follow..  10  5........RLAFISFLSFTLS--ASCDFPSSVSQRILFSCRKSVPQALEAYLEASATYQQHDFSVLRV-----AESYLQQSFLSEDTYIRKSAIIGAGLSGSSE------ALELLSEAIETQDLYEQLLILNAATSQLSKTSDKLLF----KGLTASHPVIRLEAAYRLACM--KNSKVSDYLYSFIYKLPEEIQNLAATIFLQL-EEADAYIHHLLSSPNNLTRNYVAYLIGEYKQKR------FLPTLRSLLTS---------------ASPLDQEGALYALGKLE------DSGSYPRIKALSSRSNPEVVLAAAQTL-EEALPILTNQQKLLRALYTARFLSQFYNATQEEIRLNTALALVHQGCTDPQVLH----YLTEILESKVLHRIFLPTHSTGKAIQFWKECTTFPLMSQ-RTLAMYRVAEDTILSALLKLPND-------YLPYLERILASQKTILAAKAIAFLSVTAHPQALSLVSKAALTPGDPIIRAYANLALYTMTKDPEKKAVLYRYSSYLRYQVSPETRTQLMLAILET----LVSSKT-----DEDIRVFLSLMKKT--HYKNIPILSGLLMRI........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 564
9 -14.100IDP90389 hypothetical protein [Chlamydia trachomatis D/UW-3/CX] CT_384 [Chlamydia trachomatis D/UW-3/CX]  ali follow..  7.........................................................SNSIQQRMRFCEYRTAAQEAKTSLSSDCSLLEARLALRALAKHLEADRDIH-LAASLLQKNIRHSSLTVRVITILAVGMARDYRLVPIVL----QALSDDSDTVREIAVQVAVMY----------------------------------SCLLRAVGDLANDSSIQVRITAYRAAAVLEIQD------LVPHLRVVVQNTQLDGTERREAWRSLCV--QALMTCEMLKEYP------EKCTEEQIRTLLAADHPE-------VQVATLQIILRGGRVFRSSSIMESVQKLACNSLSARVQMQAAAILYLE--------PFGEDKLTEGLSATSSILCEAASEAVCSLGIHG-----VHLAGRFLSKVQGMRSRVNLAFALLVSREKVEEAGDVVASFIKKIIRLLVAAQYSKAKMVVAQYLAGQQVGWSFCSEVFWEEGDSEDFVEPLQEESFAFALEKALSGEAGLHAVISLYPHSRWQDKLTILEA----IAYSEN-----RIATCFLRERCLQE--AASLQSAAAGAVFAL........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 537
10 -12.200IDP91695 gene: KPNA1; importin subunit alpha-1 [Homo sapiens] NP_002255 [Homo sapiens]  ali follow..  1...............MTTPGKENFRLKSYKNKSLNPDEMRRRREEEGLQLRKQKEQLFKRRNVATAEEETEEEVMSDGGFHEAQIS---------------NMEMAPGGVITSDMIEMIFSKSPEQQLSATQKFRKLLSKEPNPPIDEVISTLKRKENCTLQFESAWVLTNIASGNSLQTRIV---------------------IQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMC-CNILPPLLQLFSKQNRLTMTRNAV-------WALSNLCR-----PPPEFAKVSPCLNVLSWLLFVSDTD-------VLADACWALSYLSDGPNIDAGVCRRLVELLMHNDYKVVSPALRAVGNIVTGDDIQTQV--QSLLHLLSSPKESIKKEACWTISNITAGNR-ANIFPALISILQTA-EFRTRKEAAWAITNATSGGSAEQ--CIKPLCDLLTVMDSKIVQVALNGLENILRLGEQE------AKRNGTGINPYCALIEEA--------------GLDKIEFLQSHEN----QEIYQKAFDLIEHYFGTEDEDSSIA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 514
11 -11.100IDP00843 hypothetical protein SACOL1859 SACOL1859 [Staphylococcus aureus subsp. aureus COL]  ali follow..  213......................KISENEKLELQTYMSKIEKVLLKYQTYLKETCKECLFYPYLLVQG-EAGIGKSHLLAHLSKK--RDENHIIYLFLGQFFTKNEDPWHQILNDLEVTNSVDNFLRS-IIIDALNEGEGKRLWGNYFQSFINHIKK--SNIA---LIFSIRTPFEDVILPKNAIQDNNIVVFQHEGFSKEENYNPIVSFCDFLNPEFNNP-------FLKLMCEYCVNKFKEFDQTISELFTNVLKTVNINLSKEDKFDFDKNINVVQKVIKGLVELMNDSEFNQEESYTVVNNIAKEYVQKSNRFLEALIDENILIKNTGYKGEMIIYFSYERMGDYFLS-----EYLLEKYRNVDKRDLVTKLQSDEKVTRYFQKEDDLSYNRGLINELFIKLANENNYNMIYSFINSLVWRKDGSISKHTKCYISDNVIPYDAFRNNFLDVLLIKMPQKNHPLNIWALHKL---LKQCNLGKRDFLWTQYISINNEKVFEIINWLFSNYKKLDEETAEKYMIFLTWIFSATNNKLRDLGTKSLVKLFKTFPTKIIG---LLKLFENN-----NDPYIVERLYASVLGATLRIDICEIHIEIEEIFDKEMVYPHILMRDYARQTIEYISL.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 839
12 -9.850IDP06368 gene: ORF64; ORF64 [Human herpesvirus 8] YP_001129421 [Human herpesvirus 8]  ali follow..  10  858...........LTSLRGKIAEALTRQENKNAVDQILTDAEGLLKAQAVSIPVLENYVHNAGVLLKGEKSERFSRLKAIQNLVSSESFITVTLHSTNLGNLVTNVPKLHLLTSPSVRQSLSTLCTTLLRDALDALEKKDPALLGEGTTLALETLLGYGSVQDYKETVQIISSLVGIQKLVRDQGADKWATAVTRLTDLKSTLATTAIETATKRIQRDLKEAQKHETNRAKQKVLALDNASPERVATLLQQATAKAREFAEKHFKILLPVPADAPVQASPTPMEYSASPLPDPKDIDRATSIHGEQAWKKIQQAFKDFNFAVLWDALAAEYQ-RRGSPLPAAVGPALSGFLETILGTLNDIYMDKLRSFLPDAQPFQAPPFDWLTPYQDQVSFFLRTIGLPLVRALADKISVQAL----LSHALQSGDLQQAT-----VGTPLELPATEYARIASNMKSVFNDHGLQVRSEVADYVKTLIPHPDAIVADGLPAFLKTSLLQQEAKLLALQRADFESLESDMRAHAITQLLLSLQDPVGFLEGIIYDKVLWLITVYA--PVEEKQRMHVLLDEVKKQRAN-------TETALELEAAATHGDDARLLQRAVDELSKAAVESWRQKIQTLKSLVQEAEQAGLLLATIDTVAGQAQETISPSTLQGLYQQGQEAMA........................................................................................................................................................................................................................................................................................................................................................................................................................................... 1607
13 -9.330IDP90302 sensory transduction histidine kinase, putative [Borrelia burgdorferi B31] BB_0420 [Borrelia burgdorferi B31]  ali follow..  741..........................FEQKRRYSFVMNEKKIAEAANA---------AKTIFIANVSHDIR-GIMAATELLDTTI-LTDVQKDYVRM---INYSSDSLLSLID----DILY------------LSKIDVNELVESQEIDLESEMEMVLKAFQSQC----------------------AKKNIDLFSYSKSIFNNYIKGDIVKIKQVLIN----LIGNAFKFIVLNYEEVCRTRTDGNRVLVTVEFKVIDTGK-------GIEKE----NFSKIFEIFKQEDDSSSRVISRELIRLMGGLGNVLLSQKSIKIFEHCSILLGCSSNVRYVASFEDAYKVFKKYPSYNFVYIGIRLANNIERLNSDV-----QIIFLFYYLDNKALKNLKYGYVKKPLMGLGICSILYKKEFNPEMDFEDLVPIDSALRIKE----------------INVLIAEDNQVNQKVLKDILVVIINENFIDVVDDGVKALKSLKDKKYTIS------IDIRMPRYDGFSVAKEIRKFEKAKNLKPCVLVAVTAHALGDYISKPIHISSIKTILKKYLQFEVDDIGENE-LCRGLLEKAFDEEDLSLIKDISHSISGALSNMRSELYKDFQKIETSKDSISELKKMYSFVKDDLFQLISDIKENILFESEIVSENKLYFKNNDQFLNLLNKLLIGIKTR...................................................................................................................................................................................................................................................................................................................................................................................................................... 1438
14 -9.120IDP90881 DNA-directed RNA polymerase subunit beta` [Vibrio cholerae O1 biovar eltor str. N16961] VC0329 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  10  259.RFATSDLNDLYRRVINRLKRLLELAAPDIIVRNEKRMLQESVDARGRAITGSNKRPLKSLADMIKGKQ---GRFR--------QNLLGKRVDYSGRS-VITVGPYLRL----------------QCGLPKKMALELFKPFIYSKLTRGLATTIKAAKKMVEREEAVV-------------------------------------------DILDEVIREHP-VLLNRAPTLHRLGIQAFEP--VLIEGKAIQLHPLVCAAYNADFD-----GDQMAVHV------LTLEAQLEARTLMMSTNNILSPASGDPIIVPSQDVVLGLYYMTREKIGEGMYLTGPAEAEKAYRTKTAEL-HARVKVRITETIKHENGKLTTETKMIDTTVGRAMLWQIVPKGLPYSLVNQKLGKKQISNLLNEAYRKLGLKDTVIFADQIMYTGFAYAALSGVSVGIDDMVVPAAKYTEIAEAEEEVREIQEQVTAGERYNKVIDIWASTNDRVAKAMMENLSSEQVINRQGEQEKQESFNSIYMMADSGARGSAAQIETPITANFKEGLNVLQYFISTLADTALKTANSGYLTRRLVDVAQDVVVTEHDCGTLEGVVMTPHIEGGDVKVALTELAL.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 840
15 -9.100IDP91942 immunoglobulin A1 protease [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100007536 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  1304LEDQFAKTKQQLEDSLKKLLSADAGLASANPVTEGY--LVDKIKRN------KEALLLGLTYLE---YNFSYGQVNVKDLVLYHLDFFGKG-----------SPLDTLIELGKSGFNNLLAKNNVDT----ISLASQHGTTDLFSTLEHYRKVFTSNNDWFKSETKAYIVEEKSTIAEVKAKQKQAGTKYSIGVYDRITSNTWKYRNMVLPLLT--LPERSVFVISTMSSLGFGAYDRYRSSDHKAGKALNDFVEENARETAKRQRDHYDY---WYRIKLYRTILLYFDSSNPAMKNFFGPVGNKVVHNQHGAYATGDGVYYMSYRMLDK---THEMTHDSDQDIGLLQAPDQPSDATITINSILKHSKSDSTEGSRLQVL-FQNAADLQNYVH-NMFDLIYMMLSVYQKIEALRKIENQYLTDPADGNDVYATNVVKNLTEDEAKK----LTSFDSLID-RNGYFTIKLFAPIFSALSGEKGTPGDLMGRRIAFELKDGMVPYISNQYEE-DAKQQGQTINLYGKERGLVTDEKKVFDGKYKTWAEFKTAMYQERVDQFGNL----VTFKDPTKPWPRYGTKTINNVDELQKLMDEAVLQDATGTRWSNYNPETDSAVHKKRAIFKAYLDQTNDFRSSI.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 1999

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Schwarzenbacher R, Godzik A, Jaroszewski L. The JCSG MR pipeline: optimized alignments, multiple models and parallel searches. Acta Crystallogr D Biol Crystallogr. 2008 Jan;64(Pt 1):133-40. Epub 2007 Dec 5.