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Query: IDP95280 methyl-accepting chemotaxis protein [Acinetobacter baumannii ATCC 17978] YP_001085820 [Acinetobacter baumannii ATCC 17978], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MPRHNQLIRSLGELRLLSQTISKQATEATESGSQEAITKLQQSKKDFDENLLEIENIHGKSTDEYQKVEKIWGEVSKNIDLISSHQRVLNQLYDTNISISETVPEIQAEYNLMVDQMARQGLPSSQVIIAKNQVFIAERILRSINSVLSGTDGNVSTSDFSVDIETFGTYLNAELNGNAELGVDRIADPALRESLESIKSEYDKVLKSAAATVLKNGSQIVNVRQASSQIFSKSDVMLESLGHLSDVARKNWLTLFLGAVLILSLGGLIFSVFKLITLRSVMDKQRVARLQEEYDRNQNAILRLLDEIADLADGDLRSYATVSEDFTGAIADSINFAIDQLRDLVSRIHETSQEVARYTQDTQSITNQLAEASEHQAQEIAGASTAMNEMAQSIDQVSANASESAEVAQRSVQIASNGAQVVNRSIEGMDTIREQIQETSKRIKRLGESSQEIGNIVSLINDIADQTNILALNAAIQASMAGEAGRGFAVVADEVQRLAERSASATKQIETLVKTIQTDTNEAVISMEQTTTEVVRGANLAKDAGIALDEIQKVSGDLAKLIASISDAAKLQSASASHIATTMTVVQEITSQTTTATFDTARSVSELANMAESLRESVTDFKLPDLast
1 -93.200IDP95280 methyl-accepting chemotaxis protein [Acinetobacter baumannii ATCC 17978] YP_001085820 [Acinetobacter baumannii ATCC 17978]  ali  100  1MPRHNQLIRSLGELRLLSQTISKQATEATESGSQEAITKLQQSKKDFDENLLEIENIHGKSTDEYQKVEKIWGEVSKNIDLISSHQRVLNQLYDTNISISETVPEIQAEYNLMVDQMARQGLPSSQVIIAKNQVFIAERILRSINSVLSGTDGNVSTSDFSVDIETFGTYLNAELNGNAELGVDRIADPALRESLESIKSEYDKVLKSAAATVLKNGSQIVNVRQASSQIFSKSDVMLESLGHLSDVARKNWLTLFLGAVLILSLGGLIFSVFKLITLRSVMDKQRVARLQEEYDRNQNAILRLLDEIADLADGDLRSYATVSEDFTGAIADSINFAIDQLRDLVSRIHETSQEVARYTQDTQSITNQLAEASEHQAQEIAGASTAMNEMAQSIDQVSANASESAEVAQRSVQIASNGAQVVNRSIEGMDTIREQIQETSKRIKRLGESSQEIGNIVSLINDIADQTNILALNAAIQASMAGEAGRGFAVVADEVQRLAERSASATKQIETLVKTIQTDTNEAVISMEQTTTEVVRGANLAKDAGIALDEIQKVSGDLAKLIASISDAAKLQSASASHIATTMTVVQEITSQTTTATFDTARSVSELANMAESLRESVTDFKLPD 625
2 -67.000IDP04179 methyl-accepting chemotaxis protein [Vibrio cholerae O1 biovar eltor str. N16961] VCA0068 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  28  216....................................................................................................................................................................................................................................................................................................LAGIIVTPIRQLQQTVREIAKGNLLVKAQEGNNEITLLARDVNATVTQLRQTVESLVRISTDVASASTELATVMTQASVNSDQEKQEVEQVASAVNQLQSTAQSVTDHAHSADGAAQQANQLASQSLRMFEESHRATAKMADQLREAAQVVNQLKEQSERIGNVTEVIRSISEQTNLLALNAAIEAARAGESGRGFAVVADEVRMLAARTQTSTQEIQAIIEELQNQSNTANSSMHSSLSLLEQNQSLAAKVSASLTEINHSISALGQINAQVATASEEQSQVTKDINRNLSNIYELVSQNVTGITQSAAASHELSDLAEQQHQQLQYFRV.. 547
3 -64.700IDP01485 hemolysin secretion protein HylB VCA0220 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  26  218......................................................................................................................................................................................................................................................................................................TNLRSRVAYLKDRMSSAANLSLRTRLELGNDELCDIGKSFNAFIDKVHHSIEEVAENSKELATMASSVSQRAHMTQSNCASQRDRTVQVATAIHELGATVSEIASNAAMAADVAKQATLHSGEGKKVVGEVQNRIQTLVNELDNATQVVSSLATQINGISSTLDTIRSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRSAASTEEIQQVINRLQTESTRAVEAMEKGRSQSDVVVEFSAKANQSLTEINSQIDQINDQNIQVATATEEQSTVVEDINRNVEDINQLTTETSHVADELSRASASLQRLSSQLDKLVGSFEL.. 548
4 -56.700IDP91343 methyl-accepting chemotaxis protein [Vibrio vulnificus CMCP6] VV2_0072 [Vibrio vulnificus CMCP6]  ali follow..  25  190.......................................................................................................................................................................................................................................................................................................SSTRRLESLSAEARKVFDNPLMELVYNKVDDISEIKLALKMRQSELNAVVGRIQDSNQQLIDSARNSSSNSDKASHNLKGQTHETEQVAAAITEMHSTANEIAQNAQSASDATDQAHSAASEGMITVQDTVKAIKLLAGQLDETSDVVSQLAQHGKTIGDVLIIIQGVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRKLAQRSHESTEEIQKVIGLIQSSTQKAVSSMSEGTHLAEQCVSSADSSGQKLQILLDQVTDISDRNNQIATAVEEMARVTEDMSSSVQSISDACSATNVLSSDTCHQCNALVKSLDSQGKLVSQFR... 517
5 -52.000IDP02252 gene: tsr2; putative methyl-accepting chemotaxis protein [Yersinia pestis CO92] YPO1229 [Yersinia pestis CO92]  ali follow..  29  290....................................................................................................................................................................................................................................................................................................ITQRALTPLTHIQQAMDAISSGDLTQRLPIGRDEVAQIARSFNQFADKLSLVMAQIRGTSESVRVAANEIAAGNQDLSGRTESAAASLQQTSAALEQISATVAQSASAARQANNAVFSASEDASRGGDVITKVITTMESIE--------------KASGKIGDITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRILAQRSAQAAKEIKALI--------------ESTVSSVASGSSQVRQASNAMTDIVSSVSDVTTIMSEITNAADEQMRGIHEINSAVAQLDTMVQQNAALVQESTAASAALQAQAADLTDTVNQFKI.. 595
6 -51.000IDP02090 gene: tcp; methyl-accepting transmembrane citrate/phenol chemoreceptor [Salmonella typhimurium LT2] STM3577 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  29  213....................................................................................................................................................................................................................................................................................................LQRVLLRPLQRIMAHIQTIADGDLTHEIEAGRSEMGQLAAGLKTMQQSLIRTVSAVRDNADSIYTGAGEISAGSSDLSSRTEQQASALEETAASMEQLTATVRQNTDNARQATGLAKTASETARKGGRVVDNVVSTMNDIA--------------ESSEKIVDITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRTLASRSAQAAKEIKVLI--------------ENSVSRIDTGSTQVREAGETMKEIVNAVTRVTDIMGEIASASDEQSKGIEQVAQAVSEMDSVTQQNASLVEESAAAAAALEDQANELRQAVAAFRIQK 518
7 -50.900IDP02460 gene: cheD; methyl-accepting chemotaxis protein [Yersinia pestis CO92] YPO1675 [Yersinia pestis CO92]  ali follow..  29  214....................................................................................................................................................................................................................................................................................................MQQILIHPLNHLIAHIKHIANGDLTQNIEVGRNEVGTLAASLKHMQSELVTIVGEVRVGADAIYSGASEIAVGNNDLSARTEQQAASLEETAASMEQLTATVKQNAENARQASQLALSASETAQKGGKVVADVVQTMHEIA--------------GSSQKIADITSVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAKEIKGLI--------------DDSVNRVDLGSVLVESAGETMGDIVNAVTRVTDIMGEIASASDEQSRGIDQIGQAVAEMDRVTQQNASLVEESASAAASLEEQASMLTQAMSVFVLSV 519
8 -50.800IDP01940 gene: trg; methyl-accepting chemotaxis protein III [Salmonella typhimurium LT2] STM1626 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  28  226....................................................................................................................................................................................................................................................................................................LRRTVIQPLQQSASRIERIAAGDLTMADEPGRSEIGRLSHHLQQMQHALQQTVGAVRQGAEEIYRGTSEITAGNTDLSSRTEQQAAAIEQTAASMEQLTATVKQNADNAHHASKLAEDASGKASRGGQMVSGVVQTMGNI--------------STSSKKISEITAVINSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLASRSAQAAKEIEGLI--------------GASVSLIEQGSEEVIAAGSTMNEIVDAVKRVTDIMLDIAAASDEQSRGIVQVSQAISEMDRVTQQNASLVEEASAAARSLEEQAARLTQAVDAFRLHD 531
9 -50.700IDP01089 gene: tsr; methyl-accepting chemotaxis protein I STM4533 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  29  214....................................................................................................................................................................................................................................................................................................IKLSLIAPMNRLIESIRHIASGDLVKRIDVGSNEMGQLAENLRHMQSELMRTVGDVRNGANAIYSGASEIAMGNNDLSSRTEQQAASLEETAASMEQLTATVKQNAENARQASHLALSASETAQKGGKVVDNVVQTMRDIA--------------SSSQKIADIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLAQRSAQAAREIKSLI--------------EDSVSRVDVGSTLVESAGETMDEIVNAVTRVTDIMGEIASASDEQSRGIDQVGLAVAEMDRVTQQNASLVEESAAAAAALEEQASRLTQAVAVFRIHQ 519
10 -50.300IDP01047 putative methyl-accepting chemotaxis protein STM3152 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  30  210....................................................................................................................................................................................................................................................................................................LVAMMVKPLERIRQQFQRIAQGDLSQPIEAGRNCVGRLVPLLRAMQDSLREAVSTIRAGSDNIWRGATEISTGNNDLSSRTEEQAAALEETAASMEQLTATVKMNAEHARQASQLADAASLTAGKGGELVSDVVETMNGIS--------------ASSQQIAEITTVINSIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRNLASRSAGAAKEIEALI--------------GESVRRVAQGAQLVQETGATMDAILRGVTEVTTIMKQIASASEEQSKGISQVGVAITQMDSVTQQNAALVEQVSAAAAALERQTEDLQRSVQQFRLSA 515
11 -49.100IDP02076 putative methyl-accepting chemotaxis protein [Salmonella typhimurium LT2] STM3216 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  25  210....................................................................................................................................................................................................................................................................................................IVRSITRPLDEAVRFAEAIADGDLTRHITTDKDETGVLLQALMAMKTRLLDIVQEVQNGSESISTAAAQIVAGNQDLAARTEEQASSVEETAASMEQITATVKNTADHTSEATKLSAGAASVVKNNGEMMNQVTQKMRVI--------------NDTANRMSDIINIIDSIAFQTNILALNAAVEAARAGEHGRGFAVVAGEVRQLAQKSASSASEIRNLI--------------EDSTSQTQEGMHLVEKASALINGMVDNVEEMDVILREIGQASREQTDGISQINSAIGLIDAATQQNSCLVEESVAAAASLNEQALHLKELVNVFRVRE 515
12 -47.600IDP95064 methyl-accepting chemotaxis protein, partial [Campylobacter jejuni] AGM39603 [Campylobacter jejuni]  ali follow..  22  2..................................................................................................................................................................................................................................................................................................................................GSKINHSDLQKLEEENKNLTHKIEKFQSENLELKNKITSLEQAALESKLKTDLLNVLLTGVLKNITIIQGDMLENVNKAEVISSYSKTSLAEMDELNHIANSINASLRNITESANKTRDVAGTLHRSVDEITNVINLIKDVSDQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAEKTQKATTEVEMNINLLKQNANEMYTQSEQVEKISIDSNAHIMSFSEKFTHLVNEAHSTNSNAVGIASEAFVSLAKLDHIAFKLNGYKEIFSKSGKQLADHTS....................... 281
13 -44.900IDP01957 putative methyl-accepting chemotaxis protein [Salmonella typhimurium LT2] STM1657 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  28  54....................................................................................................................................................................................................................................................................................................MTCYLVVPINTVKKSIEEVAAGNLSIHISEGNNCAGRLIPGINSLSENISALVREIRSSSQTAMTLSEQLAARSLSLSVKTEQQSASLIQTAASIDEMAASTKNNADNTRMASIQADCATQCARKGGELMVRVTENMRSIT--------------DCASQMTEIISLIDGIAFQTNILALNAAVEAARAGDHGKGFSVVAGEVRNLAHRSAEAAKSIKALI--------------DVTHDNVRQGAAIVQEAEKNMQEIVGGSGQLNVLMSEISTTTREQEKGINQITLALSDLESATHSNVLMVEALSASSDVLKAQVIELQTKTDKFRLSQ 359
14 -42.400IDP01046 putative methyl-accepting chemotaxis protein STM3138 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  16  1.................................................................................................................................................................................................................................................................................................................................................MFKKVLGLRHWNNNVVKIPPPAAESGANASDVVVDTPEPYERILMGISTIDIIRNAIIKSCEQLNIEKERINELNEQNDKARSSLKSLVEFITEIGTTSSDIGCRMGDLNTSLTQINACIKEIQKIANQTNLIAINSAIEAARVGDAGRGFSVISKEVKNLSEDVKHSSKSVSTLTSVIKDNTARVSEVLDNQQPVIDNITTNINQIVESIGIVIDKSLSMKSVMQYISTVQFLNIVKVDHVIWKMEVYKLLLNKDINSK............................ 265
15 -34.400IDP91610 gene: ECs4554; EspB protein [Escherichia coli O157:H7 str. Sakai] BAB37977 [Escherichia coli O157:H7 str. Sakai]  ali follow..  14  43....................................................................................................................................................................................................................................................................................................................................VDICKLMLEIQKLLGKMVTLLQQQAVFESQNKAIEEKKAAATAALVGGIISSALGILGSFAAMNNAAKGAGEIAEKASSASSKAAGAASEVANKALVKATESVADEEASSAMQKAMATTTKAASRASGVADDVAKASDFAEDLADAAEKTSRINKLLNSVDKLTNTTAVAVTSLAEGTKTLPTTISESVKSTHEVNEQRAKSLENFQQGNLELY--KQDVRRTQDDITTRLRDITSAVRDLLEVQNRMGQSGR................................................ 309
16 -12.300IDP92066 gene: GAPDH2; apicoplast glyceraldehyde-3-phosphate dehydrogenase 2 [Toxoplasma gondii] ABO93620 [Toxoplasma gondii]  ali follow..  8  69.....................................................................................................................................................................QTPETFSSSAFAEPSPESTPGACPLSSNDGELSLQQAEALLREEQTLATEYAQRAAGDVQQFTAAAQEAAARGDMSAAKELAAAAAASAAEAEDLAAYAQAVGETDPAVLRERAKEEAERFEQEERRQRG-------------DAASSGTCSESSDAAAPEFSDLRDLFFGACDAT---------VSPDDLPSVPEALEKLAGLESDVQARGDQLDEKEKVVAEYLVAAQEAAVRHEEASRAFEDAKRNKKE----------------NLAAAAEKAALEAAAEYADLTTAAQLVTEEAEQESAKA------LADAVAAGDLRFAINQKIVNEAGPEARGKVPRALLA--------------PKHVRISDPAAGRVLKIFFHNNFAPFEDLPCAALHADAHLCRQHPRCVVQVEQSGDEVLQRCLLDEAYLALLTKTPDFCAAAPAEAETGLGNSAAQA. 471
17 -12.300IDP91681 LAMC3_HUMAN [Homo sapiens]  ali follow..  8 1072...................................................................................AREAFLEQMMSLEGAVKAAREQLQRLNKGARCAQAGSQKTCTQLADLEAVLESSEEEILHAAAILASLEIPQEGPSQPTKWSHLATEARALARSHRDTATKIAATAWRALLASNTSYALLWNLLEGRVALETQRDLEDRYQEVQAAQKALRTAVAEVLPEAESVLATVQQVGADTAPYLALLASPGKSRAEDLGLKAKALEKTVASWQHMATEAARTLQTAAQATLRQTEPLTKARSRLTATSASQLHQEARAALTQASSSVQAATVTVMGARTLLADLEGMKLQF----PRPKDQAALQRKADSVSDRLLADTRKKTKQAERMLGNAAPLSSSAKKKGREAEVLAKDSAKLAKALLRERKQAHRRASRLTSQTQATLQQASQQVLASEARRQELEEAERVGAGLSEMEQQIRESRISLEKDIETLSELLARLGS---DTHQAPAQALNETQWALERLRLQLGSPGSLQRKLSLLEQESQQQELQIQGFESDLAEIRADKQNLEAILHSLPENCASWQ........................ 1587
18 -10.700IDP91696 gene: LAMB2; laminin subunit beta-2 precursor [Homo sapiens] NP_002283 [Homo sapiens]  ali follow..  8 1233...........................................................HMQEKLGIVQGIVGARNTSAASTAQLVEATEELRREIGEATEHLTQLEADLTDVQDENFNANHALSGLERDRLALNLTLRQLDQHLDLLKHSNFLGAYDSIRHAHSQSAEAERRANTSALAVPSPVSNSASARHRTEALMDAQKEDFNSKHMANQRALGKLSAHTHTLS-LTDINELVCGAPGDAPCATSPCGGAGCRDEDGQPRCGGLS------CNGAAATADLALGRARHTQAELQRALAEGGSILSRVAESEAQQRAQAALDKANASRGQVEQANQELQELIQSVKDFLNQEGADPDSIEMVATRVAEQIQHLAGAIAERVRSLADVDAILARTVGDVRRAEQLLQDARRARSWAEDEKQKAETVQAALEEAQRAQGIAQGAIRGAVADTRDTEQTLYQVQERMA-------------------------GAERALSSAGERARQLDALLEALKLKRAGNSLAASTAEETAGSAQGRAQEAEQLLRGAERKAQGVLAAQARAEQLRDEARDLLQAAQDKLQRLQELEGTYEENERALESKAAQLDGLEARMRSVLQAINL.. 1789
19 -10.600IDP91663 gene: LAMA1; laminin subunit alpha-1 precursor [Homo sapiens] NP_005550 [Homo sapiens]  ali follow..  8 1596...............................................................................................................................................................................NTTKYLQESLLKENMQKDLGKIKLEGVAEETDNLQKKLTRMLASTQKVNRATERIFKESQDLAIAIERLQMSITE-------------------------IMEKTTLNQTLDEDFLLPNSTLQNMQQNGTSLLEIMQIRDFTQLHQNATLELKAAEDLLSQIQENYQKPLEELEVLKEAASHVLSKHNNELKAAEALVREAEAKMQESNHLLLMVNANLREFSDKKLHVQEEQNLTSELIVQGRGLIDAAAAQTDAVQDALEHLEDHQDKLLLWSAKIRHHIDDLVMHMSQRNAVDLRAEDHAAEFQRLADVLYSGLENIRNVSLNATSAAYVHYNIQSLIEESEELARDAHRT-----------VTETSLLSESLVSNGKAAVQRSSRFLKEGNNLSRKLPGIALELSELRNKTNRFQENAVEI---TRQTNESLLILRA......... 1999
20 -10.600CPX_91663_91746 Complex of LAMA1_HUMAN with Q8BDF8_9POXV [Undefined organism]  ali follow..  8 1596...............................................................................................................................................................................NTTKYLQESLLKENMQKDLGKIKLEGVAEETDNLQKKLTRMLASTQKVNRATERIFKESQDLAIAIERLQMSITE-------------------------IMEKTTLNQTLDEDFLLPNSTLQNMQQNGTSLLEIMQIRDFTQLHQNATLELKAAEDLLSQIQENYQKPLEELEVLKEAASHVLSKHNNELKAAEALVREAEAKMQESNHLLLMVNANLREFSDKKLHVQEEQNLTSELIVQGRGLIDAAAAQTDAVQDALEHLEDHQDKLLLWSAKIRHHIDDLVMHMSQRNAVDLRAEDHAAEFQRLADVLYSGLENIRNVSLNATSAAYVHYNIQSLIEESEELARDAHRT-----------VTETSLLSESLVSNGKAAVQRSSRFLKEGNNLSRKLPGIALELSELRNKTNRFQENAVEI---TRQTNESLLILRA......... 1999
21 -10.500IDP00013 LPXTG-motif cell wall anchor domain protein BA_3254 [Bacillus anthracis str. Ames]  ali follow..  9  40...................................................................................................................................................................................................................................................................................LAEIKQHKQGLDAKLQQHKENVDQTLNELNKVKENVDTKELHERKQVADEKINEIKQHKQELDAKLQQDKQIAEDKIAEIKEHKKQVEDKVAEVKEHKQNIDNKVNEIKEHKQTVDEKVNEMKQHKENIDQKVNELKEVKKQVDEKLAELKKAKQTAEDKLAELKENKPNTGNTLEELKKIKSNLDSLSAN-----LELAKQD------------VKNKLAALQEARQDLINKINEIKQTVSDDLSKKKQDLDIKINDFKHTEKKIDD---KLAEIHTTKQNIDNKINEVSQSKQTTTNANNNARELPNAGSKQSNNMALGMLSVLGGILLVTRNKIKT........... 368
22 -9.740IDP91721 gene: MMRN2; multimerin-2 precursor [Homo sapiens] NP_079032 [Homo sapiens]  ali follow..  8  247.............................................................................................................................................................................................................................SFNQSLHSLTQAIRNLSLDVEANRQAISRVQDSAVARADFQELGAKFEAKVQENTQRVGQLRQDVEDRLHAQHFTLHRSISELQADVDTKLKRLHKAQEAPGTNGSLVLATPGAGARPEPDSLQARLGQLQRNLSELHMTTARREEELQYTLEDMRATLTRHVDEIKELYSESDETFDQISKVERQVEELQVNHTALRELRVILMEKSLIMEENKEEVERQLLELNLTLQHLQGGHADLIKYVKDCNCQKLYLDLDVIREGQRDATRALTQVSLDERRQLDGSSLQALQNAVDAVSLAVDAHKAEGERARAATSRLRSQVQALDDEVGALKAAAAEARHEVRQLHSAFAALLEDALRHEAVLAALFGEEVLEEMSEQTPGPLPLSYEQIRVALQDAASGLQ... 649
23 -9.710IDP04182 sensor histidine kinase [Vibrio cholerae O1 biovar eltor str. N16961] VCA0238 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  11  225....................................................................................................................................................................................................................................................................................................LLRTLSKPLAELVKSTTALEQGRLDHRISIGPDELKTLARHFNYMAQSLEQAQQKERMSRQLIEREVADRTQELAQALQTLEKAKHQQKEFANVSHELRSPATAILGEAQITLRSRHNSDDEYRQTLLRISESAEQLAFRIEDLLMLIRHDERLFHPALTELLLGEIWQAVVRQASLLTHAQQVELT-YTDCDK----LLMVIRILVDNALRYDPTQQPIGLNLELDEEAWRVQLVD------QGIGIAEA---DLSVIFERYFRAENGKRYRPDGLGIGLTLAQSIVKQLDGEIRIESVLEQGTT........................... 532
24 -9.560IDP04550 sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_0460 [Clostridium perfringens ATCC 13124]  ali follow..  12  465......................................................................................................................................................................................................................................................................................................DKWKKDYNKILEKTKEISNGNLDSKDDEDCGFFNPMRDELNNIQKGFKAAVDEISNVSHDLKTPLTSIIAYVDLLKG--EEDEEKRKAYLETLERKSQRLKHLIEDLFEVSKATTGNINLNIMDVDISYLMKQVVLELDDKINEAGLDMR-LPLDGQRTYRVFE---------NLII-NV-VKYALPNSR------VYIDIKEGRENVDVIIKNISA--DEITFNINEISDRFVRGKSRNTEGSGLGLAIVKSFVELQGGKFHIE.................................................................. 728
25 -9.340IDP04495 sensory box sensor histidine kinase/response regulator [Vibrio cholerae O1 biovar eltor str. N16961] VC0622 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  14  422...................................................................................................................................................................................................................................................................................................YLSNFITSPLLKLTWAAERVSAGDLDEAM--RKDEIGRLAVSFERMQRSIREKISLIKSQNKELESNLLIIRKQNDELQLANKLKDE----LATTSHELRTPLHGMIGIAEALISANGPISAAHKYQLDIIISSGQRLATLVDDLLDYHKM--DIQRCAVDLSSATRLVLELSHHYNLIG-NA-IKYTSEGDTGQG--IPAEQLEHIFEPLIQAGHDISRQLIELMHGTLYVSSQPMVGTT-LASEEEIAQARLTELPHFQAPEVLDSELPEQSNLPENEHGPVADDEPVNLRVLDSFLRLEGYRVHTAQDGHQVLEAIKREKPELV-DIMMPG 825
26 -9.090IDP95025 Set165a_026 [Vibrio cholerae O1 biovar El Tor]  ali follow..  11  13.........................................................................................................................................................................................................................ENIIDNRKAVRGMRKFEEMTRKHSAKITKLFEDTEKSKQRA--IKNTEKEEVKAATKKLTAEQKAAAQAEKLKAQEAAKLKKFNDWKLAQFRSAAFERLSLEQKMELKRVLSAKRSEEEIREEYRQTTAMMRRENQRRAAYERKQSKINNSGVKGGLTAGATGGGIVALAGNPAALA--AAAVIGGGAMAINSGSQQFRDTKEGANLV--GLD--YNEFAQLANGLIAVTETIPDVSTAADKIKDLLDRSGEVMAETVFDSDKG-DKGEGITGDKESLNNFMNQSPDDAKQQAFVLEAFGSDFYNIIRGIQTNRQGFEAGKQNAVQFNTAETAATEFNKSVASMVSAISNADLN-EFLSPSSLAMFGKLGELLNSIATLLGYLSGALNLLSPAINLVLDGLNLL.... 441
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.