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Query: IDP95385 set238a-022 [Vibrio cholerae], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MARLQFQLKVNGLEDESLVVRGFEGQESLSDSVWRSEPCYGFRYQVDLASALSNLTAEQFVDQTAHLTILRDGQVVQQINGIVRQLSKGDTGHRHTFYSLTLVPALERLSLRSNSRIFQQQSVPEIISILLQEMGIEDYAFALKRECAQREFCVQYREADLQFLHRIAAEEGLVYSHLHEAQKHTLLFTDSSDSQPKLAKPVPYNALAGGEINLPYVVDLQFKTTAQVSHTELKDYSFKKPAYGFTQRTQGKDIAYQQPNYEHFDAPGRYKDDANGKAFSQIRLEYLRRDALLADAKSDEPLLLAGVRFDLQDHLDLAMNRDWLVVQANHQGTQPQALQEEGGSGATTYSNQLKLIPAHITWRARPCAKPQVDGPMIATVVGPQGEEIYCDNFGRVKVHFPWDRYSSSNEKSSCWVRVAQEWAGSQYGSMAIPRVGHEVIVSFLNGDPDQPIITGRTYHATNTAPYALPDHKTKTVLRTETHQGQGYNELSFEDQAGSEQILLHAQKDWDALIEHDHTEVIRHDQHLTVDNDRFTRIQRNQHLTVEGEVRGKIALDSSHEVGASLQHKVGQRIAVEAGKEISLKSGAKIVVEAGAELTLTAGCSFVKVDAGGVHLVGPAINLNAGGSAGSGSAYGGQLAAAPRMLAQAKPVAELVQPDIAASMQSGAARVIDVASLPTIMPSSANNTANDEPVAEEKTPERILKSDLLKPSDELEKLAKRQASAYRQGNHSDEVKLLQEALIKLGFDLGKAGADGDFGSKTKTAIEQFQKSYQPSHQTHPSYSIGPVDGIVGKGTLLALDEALMDGWVYESPRFPMTLVNGELAPIEFLNFYNGDEIEESDYEEAARELNCEVAAIKAVAKTETGSYGAYFNFGQGDDDVPAILFERHHFHKYTNGKYDMYEDISNPIAGGYGTISTQYSKLMKAYALDKRAALKSVSWGKFQILASNYVEAGYSSPEDFILDISKSEKNQLKSFVNFIKSDKVLLSSIRSKNWLSFARRYNGPRQKGYDLKMEKNYNDLLLast
1 -281.000IDP95385 set238a-022 [Vibrio cholerae]  ali  100  1MARLQFQLKVNGLEDESLVVRGFEGQESLSDSVWRSEPCYGFRYQVDLASALSNLTAEQFVDQTAHLTILRDGQVVQQINGIVRQLSKGDTGHRHTFYSLTLVPALERLSLRSNSRIFQQQSVPEIISILLQEMGIEDYAFALKRECAQREFCVQYREADLQFLHRIAAEEGLVYSHLHEAQKHTLLFTDSSDSQPKLAKPVPYNALAGGEINLPYVVDLQFKTTAQVSHTELKDYSFKKPAYGFTQRTQGKDIAYQQPNYEHFDAPGRYKDDANGKAFSQIRLEYLRRDALLADAKSDEPLLLAGVRFDLQDHLDLAMNRDWLVVQANHQGTQPQALQEEGGSGATTYSNQLKLIPAHITWRARPCAKPQVDGPMIATVVGPQGEEIYCDNFGRVKVHFPWDRYSSSNEKSSCWVRVAQEWAGSQYGSMAIPRVGHEVIVSFLNGDPDQPIITGRTYHATNTAPYALPDHKTKTVLRTETHQGQGYNELSFEDQAGSEQILLHAQKDWDALIEHDHTEVIRHDQHLTVDNDRFTRIQRNQHLTVEGEVRGKIALDSSHEVGASLQHKVGQRIAVEAGKEISLKSGAKIVVEAGAELTLTAGCSFVKVDAGGVHLVGPAINLNAGGSAGSGSAYGGQLAAAPRMLAQAKPVAELVQPDIAASMQSGAARVIDVASLPTIMPSSANNTANDEPVAEEKTPERILKSDLLKPSDELEKLAKRQASAYRQGNHSDEVKLLQEALIKLGFDLGKAGADGDFGSKTKTAIEQFQKSYQPSHQTHPSYSIGPVDGIVGKGTLLALDEALMDGWVYESPRFPMTLVNGELAPIEFLNFYNGDEIEESDYEEAARELNCEVAAIKAVAKTETGSYGAYFNFGQGDDDVPAILFERHHFHKYTNGKYDMYEDISNPIAGGYGTISTQYSKLMKAYALDKRAALKSVSWGKFQILASNYVEAGYSSPEDFILDISKSEKNQLKSFVNFIKSDKVLLSSIRSKNWLSFARRYNGPRQKGYDLKMEKNYNDLL 1021
2 -192.000IDP95313 VgrG protein [Vibrio cholerae O1 biovar El Tor str. N16961] NP_232524 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  82  1MARLQFQLKVDGLEDESLVVRGFEGQESLSDSVWRCEPCYGFRYQVDLASALSNLTAEQFVDQTAHLTILRDGQVVQQINGIVRQLSKGDTGHRHTFYSLTLVPALERLSLRSNSRIFQQQSVPEIISILLQEMGIEDYAFALKRECAQREFCVQYRETDLQFLHRIAAEEGLVYSHLHEAQKHTLLFTDSSDSQPKLAKPVPYNALAGGEINLPYVVDLQFKTTAQVSHTELKDYSFKKPAYGFTQRTQGKDIAYQQPNYEHFDAPGRYKDDANGKAFSQIRLEYLRRDALLADAKSDEPLLLAGVRFDLQDHLDHAMNRDWLVVQANHQGTQPQALQEEGGSGATTYSNQLKLIPAHITWRARPCAKPQVDGPMIATVVGPQGEEIYCDNFGRVKVHFPWDRYSSSNEKSSCWVRVAQEWAGSQYGSMAIPRVGHEVIVSFLNGDPDQPIITGRTYHATNTAPYALPDHKTKTVLRTETHQGQGYNELSFEDQAGSEQILLHAQKDWDALIEHDHTEVIRHDQHLTVDNDRFTRIQRNQHLTVEGEVRSKIALDSSHEVGASLQHKVGQRIAVEAGKEISLKSGAKIVVEAGAELTLKAGGSFVKVDAGGVHLVGPAINLNAGGSAGSGSAYGGQLAAAPRMLAQAKPVAELVQPDIAASMQSGAARVIDVASLPTMMPSSANNTANDEPVAEEKTPERILKSDLLKPSDELEKLAKRQASAYRQGNHSDEVKLLQEALIKLGFDLGKAGADGDFGSKTKTAIEQFQKSYQPSHQTHPSYSIGAVDGIVGKGTLLALDEALMDGWVYENNIYQIWPLGKTSEKYESAGRGPGVISTGNGDYGGASYGCYQMSSNLGVVQKY--IQSSKFKEFFSGLNPATKEFNVVW------------QDIASRYPQEF---REEQHQFIKRTHYDIQIGH-----GKGLLFEHN------AAVHDLIWSTSVQFGGRTNLIFNALNGQN--MESMTDKDIIILVQDYSSPS----DLKKRAVSEKLL 1005
3 -177.000IDP95384 set238a-021 [Vibrio cholerae]  ali follow..  97  1MARLQFQLKVDGLEDESLVVRGFEGQESLSDSVWRSEPCYGFRYQVDLASALSNLTAEQFVDQTAHLTILRDGQVVQQINGIVRQFSKGDTGHRHTFYSLTLVPALERLSLRSNSRIFQQQSVPEIISILLQEMGIEDYAFALKRECAQREFCVQYRETDLQFLHRIAAEEGLVYSYLHEAQKHTLLFTDSSDSQPKLAKPVPYNALAGGEINLPYVVDLQFKTTAQVSHTELKDYSFKKPAYGFTQRTQGKDIAYQQPNYEHFDAPGRYKDDANGKAFSQIRLEYLRRDALLADAKSDEPLLLAGVRFDLQDHLDLAMNRDWLVVQANHQGTQPQALQEEGGAGATTYSNQLKLIPAHITWRARPCAKPQVDGPMIATVVGPQGEEIYCDNFGRVKVHFPWDRYSSSNEKSSCWVRVAQEWVGSQYGSMAIPRVGHEVIVSFLNGDPDQPIITGRTYHATNTAPYALPDHKTKTVLRTETHQGQGYNELSFEDQAGSEQILLHAQKDWDALIEHDHTEVIRHDQHLTVDNDRFTRIQRNQHLTVEGEVRSKIALDSSHEVGASLQHKVGQRIAVEAGKEISLKSGAKIVVEAGAELTLKAGGSFVKVDAGGVHLVGPVINLNAGGSAGSGSAYGGQLAAAPRMLAQAKPVAELVQPDIVASMQSGAARVIDVASLPHNDAGFS................................................................................................................................................................................................................................................................................................................................................. 684
4 -169.000IDP04129 conserved hypothetical protein [Yersinia pestis CO92] YPO0764 [Yersinia pestis CO92]  ali follow..  35  34.SGLQFKLTAAGLPPQTFAVVDFSLNEAFSSP---------FVLHVGLASADPAVDFSAVLDEDATLSIWREGILQRSITGMIASFEQGNTGFHQTRYSMVIRPALWRTSLRRNSRIFQLESVEAIISTLLKENGINDFAFGFRHSHPAREFCVQYQESDFDFIQRLTAEEGIFYYFEFSTGKNTVVYADDVGSLPKGA-SLPYNPNVAAQAQELSITTFTRSAQVRPAMVQLKDYTFKNPKWAAEFSEQARELQNQRPDYEHFDFPGRFKDEQHGKDFTRYRLEALRNDANKGQGESNEFTLQPGQLFSLSAHPRDDLNHAWQIVSIQHTGKQMQALEQESGDQGTVLFNQFSFIPPTQTWRPTPLPKPVTDGPQIAMVVGPPSEEIYCDEYGRIRLQFQWDRYGQSNDQSSCWIRVTQPWAGQGWGMLAIPRIGQEVVVDFLHGDPDQPIVTGRTYHANNLPPSALPGAKTQMALQSKTHKGEGYNELRFEDQDGKQELSMRAQRDMNTTVLNDRSTTVSGNHTETVTKDQAVTVSGNQTMDITQDQTITVTGTQRIDVTQDRIIDVTAEQQTTVKADDRLLISGKQKTKIDLDQEYEVVGSTLKVGGYQKNTLEGYKKSKIGGDNTTTVGGHDKLTVGDTITITAGTSITLQCGASSIVMDEAGNIKIT-GVNITSAASTTHTIKAKTVTSCGDT................................................................................................................................................................................................................................................................................................................................... 728
5 -167.000IDP95327 hypothetical protein [Vibrio cholerae] AHX36826 [Vibrio cholerae]  ali follow..  82  1MARLQFQLKVDGLEDESLVVRGFEGQESLSDSVWRSEPCYGFRYQVDLASALSNLTAEQFVDQTAHLTILRDGQVVQQINGIVRQFSKGDTGHRHTFYSLTLVPALERLSLRSNSRIFQQQSVPEIISILLQEMGIEDYAFALKRECAQREFCVQYRETDLQFLHRIAAEEGLVYSHLHEAQKHTLLFTDSSDSQPKLAKPVPYNALAGGEINLPYVVDLQFKTTAQVSHTELKDYSFKKPAYGFTQRTQGKDIAYQQPNYEHFDAPGRYKDDTNGKAFSQIRLEYLRRDALLADAKSDEPLLLAGVRFDLQDHLDHAMNRDWLVVQANHQGTQPQALQEEGGAGATTYSNQLKLIPAHITWRARPCAKPQVDGPMIATVVGPQGEEIYCDNFGRVKVHFPWDRYSSSNEKSSCWVRVAQEWAGSQYGSMAIPRVGHEVIVSFLNGDPDQPIITGRTYHATNTAPYVLPDHKTKTVLRTETHQGQGYNELSFEDQAGSEQILLHAQKDWDALIEHDHTEVIRHDQHLTVDNDRFIRIQRNQHVTIEGESRSKIVLDSSHEVGASLQHKVGQRIAVEAGKEISLKSGAKIVVEAGAELTLKAGGSFVKVDAGGVHLVGPAINLNAGGSAGSGSAYGGQLAAAPRMLAQAKPVAELVQPDIAASMQSGAARVIDVASLPTMMPSSANNTANGEPVAEEKTPERILKSDLLKPSDELEKLAKRQAGAYRQGNHSDEVKLLQEALIKLGFDLGKAGADGDFGSKTKTAIEQFQKSYQPSHQTHPSYSIGPVDGIVGKGTLLALDEALMDGWVDSKRSLVFSSNGMALLR----EIEELRLIPYDDQTGKSISSYVEGATIGYGYLIPKNEWSIYKNGITKEIAEELFLRKVPRFQENVQSKIKVDINQNQFDALVLLCYNIGEGNFNTSSVL--------------KLVNGGSAPVYGNNIDNAWLAWNKSQGKVMQGLIKRRKCENVYHKGVYEK-W........................... 976
6 -166.000IDP04387 putative Rhs accessory genetic element [Yersinia pestis CO92] YPO3606 [Yersinia pestis CO92]  ali follow..  38  169.SGLQFTLTTASLPPQTFAVVDFTLSEMLSSP---------FVLNVGLASADPAVDFAAVLDEDATLFIWREGVLQRSITGMVASFEQGDTGFHQTRYSMVIRPALWRTSLRRNARIFQQASVEEIITTLLKENGINDFAFGFRHPHPVREFCVQYQESDFDFIQRLTAEEGIFYYFEFSAGKNTVVYADDVGSLPKGA-SLPYNPNVAAQAQELSITTFTRSAQVRPAMVQLKDYTFKNPNWAAAFSEQSGELQNQRPDYEHFDFPGRFKDAQHGQDFTRYRLDALRNDANLGQGASNDFTLQPGQLFSLYNHPRGDLNHAWQLLGIQHSGKQMQALEQASGDQGTVLFNHFSFIPHTQTWRPTPLAKPAMDGPQIAMVVGPPGEEIYCDEYGRIRLQFLWDRYGQSNDNSSCWIRVTQPWAGQGWGMLAIPRIGQEVVVDFLHGDPDQPIVTGRTYHANNIPPGSLPASKTQMAFRSKTHKGEGYNEMRFEDAKGGEGLFMHAQKDMTTMVLNDRKTDVTQDHSEHIGQDQSVTVVRNQSNTIQNDRRVEVTRDQQTEVGNDYQLVVKGEKKEFVTKIRYTEVHETLTVTKSIKIHAKQGDISISTPNAGITITHDG-AIVLQGKYIRLAADMIDLNPEE........................................................................................................................................................................................................................................................................................................................................................................................... 800
7 -160.000IDP95318 hypothetical protein [Vibrio cholerae] AHX36850 [Vibrio cholerae]  ali follow..  80  1MARLQFQLKVDGLEDESLVVRGFEGQESLSDSVWRSEPCYGFRYQVDLASALSNLTAEQFVDQTAHLTILRDGQVVQQINGIVRQFSKGDTGHRHTFYSLTLVPALERLSLRSNSRIFQQQSVPEIISILLQEMGIEDYAFALKRECAQREFCVQYRETDLQFLHRIAAEEGLVYSHLHEAQKHTLLFTDSSDSQPKLAKPVPYNALAGGEINLPYVVDLQFKTTAQVSHTELKDYSFKKPAYGFTQRTQGKDIAYQQPNYEHFDAPGRYKDDANGKAFSQIRLEYLRRDALLADAKSDEPLLLAGVRFDLQDHLDLAMNRDWLVVQANHQGTQPQALQEEGGAGATTYSNQLKLIPAHITWRARPCAKPQVDGPMIATVVGPQGEEIYCDNFGRVKVHFPWDRYSSSNEKSSCWVRVAQEWAGSQYGSMAIPRVGHEVIVSFLNGDPDQPIITGRTYHATNTAPYALPDHKTKTVLRTETHQGQGYNELSFEDQAGSEQILLHAQKDWDALIEHDHTEVIRHDQHLTVDNDRFTRIQRNQHLTVEGEVRSKIALDSSHEVGASLQHKVGQHIAVEAGKEISLKSGAKIVVEAGAELTLKAGGSFVKVDAGGVHLVGPAINLNAGGSAGSGSAYGGQLAAAPRMLAQAKPVAELVQPDIAASMQSGAARVIDVASLPTMMPSSANNTANDEPVAEEKTPERILKSDLLKPSDELEKLAKRQASAYRQGNHSDEVKLLQEALIKLGFDLGKAGADGDFGSKTKTAIEQFQKSYQPSHQTHPSYSIGPVDGIVGNGTLLALDEALMDGWVYENDEMDLKWLTVPKGQLTFDAEG------NDVDSSTFFSRKVHVPNMRGSVIGNSGVTIGRGLDLGNPPSAASGQTPSKINLKELFELANLNPKLSKWLLSVEGKTKDSALESLKNSGLSELTITRKQQYIMFNHV-EEKTRVLITKPDV---GMPRNVKDVLVDITSYSKTRAWYVPTLVNDDYSNFKKSLDYKNSDKVPLRKRVRYEHL. 1037
8 -159.000IDP90091 ZZZ_0007 [Escherichia coli 042]  ali follow..  21  15QSEHFIRLHG---CDISLFPLEIKGKESISDV---------YSYEIKCFSRTDHNSLDKLHGTRLSCEIGEQYNSARFIHGVVTKVIYNYDNSMQHTCIIILQPEIAELASGKRTRVWSNIKPSDIVSTILEDSLFSPPQVILYKEQNLLEYKIQYQESDLDFINRILSEAGIYYFFVHNRDKHIMTLADDPASHPKASYDKLLPCENLKESRHGYIREWSFTESLKCPSVTLSGYNESNVSEITIKSESK--LTDVKPSKGVYEDIIPERKRELIKKRSEALIASCDSELKIWSGKTDSWWLSCGECFSLDKQD-------YRITSLYLNAVNNDNEHAG------LCYCDLCASDNKSSLNFSRFKTPIIPGVLLARVVGPDSEEYYTDDNGRVKISFLWEKSAAGTDKTSCWVRVSQVWSGEGFGSQFIPRIGSEVLVSFIQGNPDYPVIVGTVYNGQNTSPFSLPENNCKSGFITRSVKNGEGHQLVFDDKEGEEKVIVTSSGDSLLTVKKDMISTINRSMSLTIAEGRNAEIGNDRLVLKEGDLHNDVHGNINIKVSN------GDYNLKVSGGSGSLITDKNLTLESTQSIKIKVGANEITISTSGIDIKAAKITIEGQVSAEVKAA-----------TLKFESQAISEVKGTMLTLQGSAMTQIKGG........................................................................................................................................................................................................................................................................................................................................................... 655
9 -159.000IDP95386 set238a-023 [Vibrio cholerae]  ali follow..  80  68MARLQFQLKVDGLEDESLVVRGFEGQESLSDSVWRSEPCYGFRYQVDLASALSNLTAEQFVDQTAHLTILRDGQVVQQINGIVRQFSKGDTGHRHTFYSLTLVPALERLSLRSNSRIFQQQSVPEIISILLQEMGIEDYAFALKRECAQREFCVQYRETDLQFLHRIAAEEGLVYSYLHEAQKHTLLFTDSSDSQPKLAKPVPYNALAGGEINLPYVVDLQFKTTAQVSHTELKDYSFKKPAYGFTQRTQGKDIAYQQPNYEHFDAPGRYKDDANGKAFSQIRLEYLRRDALLADAKSDEPLLLAGVRFDLQDHLDHAMNRDWLVVQANHQGTQPQALQEEGGSGATTYSNQLKLIPAHITWRARPCAKPQVDGPMIATVVGPQGEEIYCDNFGRVKVHFPWDRYSSSNEKSSCWVRVAQEWAGSQYGSMAIPRVGHEVIVSFLNGDPDQPIITGRTYHATNTAPYALPDHKTKTVLRTETHQGQGYNELSFEDQAGSEQILLHAQKDWDALIEHDHTEVIRHDQHLTVDNDRFTRIQRNQHLTVEGEVRSKIALDSSHEVGASLQHKVGQRIAVEAGKEISLKSGAKIVVEAGAELTLKAGGSFVKVDAGGVHLVGPAINLNAGGSAGSGSAYGGQLAAAPRMLAQAKPVAELVQPDIAASMQSGAARVIDVASLPTMMPSSANNTANDEPVAEEKTPERILKSDLLKPSDELEKLAKRQASAYRQGNHSDEVKLLQEALIKLGFDLGKAGADGDFGGKTKTAIEQFQKSYQPSHQTHPSYSIGAVDGIVGKGTLLALDEALMDGWVYENDEMDLKWLTVPKGQLTFDAEGNDIEGNIYFSRVIHWPGNSESGVTIGRGYDIGNRSQPEVCDLLIKSGVAHDQATVISKGAGLKGSNADNYVRLNKTNTEISRKAQHNIFLTIYPEYIKRAKINYDKWTTEKGVILANIEGVDYKDKTPWDELDPKIQDVIVDLVGFTKGPRPMVYGLNDKDYISTNPTLKGRRRASY---LRGDY.... 1092
10 -159.000IDP95315 VgrG protein [Vibrio cholerae 1587] EAY35041 [Vibrio cholerae 1587]  ali follow..  80  1MARLQFQLKVDGLEDESLVVRGFEGQESLSDSVWRSEPCYGFRYQVDLASALSNLTAEQFVDQTAHLTILRDGQVVQQINGIVRQLSKGDTGHRHTFYSLTLVPALERLSLRSNSRIFQQQSVPEIISILLQEMGIEDYAFALKRECAQREFCVQYRETDLQFLHRIAAEEGLVYSHLHEAQKHTLLFTDSSDSQPKLAKPVPYNALAGGEINLPYVVDLQFKTTAQVSHTELKDYSFKKPAYGFTQRTQGKDIAYQQPNYEHFDAPGRYKDDANGKAFSQIRLEYLRRDALLADAKSDEPLLLAGVRFDLQDHLDLAMNRDWLVVQANHQGTQPQALQEEGGSGATTYSNQLKLIPAHITWRARPCAKPQVDGPMIATVVGPQGEEIYCDNFGRVKVHFPWDRYSSSNEKSSCWVRVAQEWAGSQYGSMAIPRVGHEVIVSFLNGDPDQPIVTGRTYHATNTAPYALPDHKTKTVLRTETHQGQGYNELSFEDQAGSEQILLHAQKDCDALIEHDHTEVIRHDQHLTVDNDRFTRIQRNQHLTVEGEVRSKIALDSSHEVGASLQHKVGQRIAVEAGKEISLKSGAKIVVEAGAELTLKAGGSFVKVDAGGVHLVGPAINLNAGGSAGSGSAYGGQLAAAPRMLAQAKPVAELVQPDISASMQSGAARVIDVASLPTMMPSSANNTANDEPVAEEKTPERILKSDLLKPSDELEKLAKRQASAYRQGNHSDEVKLLQEALIKLGFDLGKAGADGDFGGKTKTAIEQFQKSYQPSHQTHPSYSIGPVDGIVGNGTLLALDEALMDGWVYENDEMDLKWLTVPKGQLTFDAEGNDV---DSSTFFSRKVHVPNMRGSVIGNSGVTIGRGLDLGNPPSAASGQTPSKINLKELFELANLNPKLSKWLLSVEGKTKDSALESLKNSGLSDEELTITRK-QQYIMFNHV-EEKTRVLITKPDV---GMPRNVKDVLVDITSYSKTRAWYVPTLVNDDYSNFKKSLDYKNS-KVPLRKRVRYEHL. 1039
11 -153.000IDP04399 putative Rhs accessory genetic element [Yersinia pestis CO92] YPO3613 [Yersinia pestis CO92]  ali follow..  38  109.SGLQFTLTTASLPPQTFAVVDFTLSEMLSSP---------FVLNVGLASADPAVDFAAVLDEDATLFIWREGVLQRSITGMVASFEQGDTGFHQTRYSMVIRPALWRTSLRRNARIFQQASVEEIITTLLKENGINDFAFGFRHPHPVREFCVQYQESDFDFIQRLTAEEGIFYYFEFSAGKNTVVYADDVGSLPKGA-SLPYNPNVAAQAQELSITTFTRSAQVRPAMVQLKDYTFKNPNWAAAFSEQSGELQNQRPDYEHFDFPGRFKDAQHGQDFTRYRLDALRNDANLGQGASNDFTLQPGQLFSLYNHPRGDLNHAWQLLGVQHSGKQMQALEQASGDQGTVLFNHFSFIPHTQTWRPTPLAKPAMDGPQIAMVVGPPGEEIYCDEYGRIRLQFLWDRYGQSNDNSSCWIRVTQPWAGQGWGMLAIPRIGQEVVVDFLHGDPDQPIVTGRTYHANNIPPGSLPASKTQMAFRSKTHQGEGYNEMRFEDAKGGEGLFMHAQKDMSTTVKDNQTTTVGNQTVTVEKGDRTVTVGNETTDITQGSLTETIKVRRSTCANFIQVKDAPGTQLYTATEQIKFVVGKSITLNPDSIILQFSGSTSITLNAANIDAIAPLINLNKDKG.......................................................................................................................................................................................................................................................................................................................................................................................................... 732
12 -153.000IDP04108 conserved hypothetical protein [Yersinia pestis CO92] YPO0507 [Yersinia pestis CO92]  ali follow..  20  2...QLIEIENEVLSGQDAFPLSFKTQEKVSGN---------PSYQLVFQVAEADLDLVSLLGEIIKVRIELPDSAYRTFFTYVIAGADEGQRQDKFVYSLELSTWTWFLMQNRNCRIFQDLNIIDIIEQVFSKYNFADYRFDIVGNYRLREYCVQFAETDFDFVNRLMEDEGVWYYFEHNEDKHTLVMTDQQQFPVLEGHELSFLPDSEERAIREGIQRIQRSQRIHSSEIVLRDFDFLNPRNTLQTHIEESRQHLQGVPLEWYDYAAGYTDPQHGESIARLRLEAIQSNGQLLSGESNATGLVPGRSFALVQHPDNNRNRGFKLISCDYSFVQDGP---DSASQGRNVACKFKALNDDVVYRPQCTPPPKVPGVQSATVVGARESEVHTDKFARIRVHFHWDRYKTTEDDSSCWIRVVQAWAGKGWGVLAMPRVGQEVLVNYVDGDLDRPMVTGIVYNGENPPPYRLPDHINYSGFVSRSLRFGHASQLTFDDNRGNERIMLHAERDLQRTVERNSATAVGQDKYDTVERTATEWINNHISYKDSATGISVSTTGTSLSVTGMSTSVTGVSVGFTLIGTSFTGVSTSFTGVGTSFTGASNSLTGVSNSMTGCSSSFTGTSNSMTGSSHSMTGMSTSITGHSMSQTGSS----SSITGDSTSFTGSSVSSTGSSVSTTGVSTSTTGSSTSTTGCSVSTTGSSTSTTGNSVSMT---GNSTSTTGCSISTTGSSIGTVGSSISTTGSSVSTTGSSISTTGLS.................................................................................................................................................................................................................................................................... 758
13 -149.000IDP04121 conserved hypothetical protein [Yersinia pestis CO92] YPO2725 [Yersinia pestis CO92]  ali follow..  22  1MSNLSSPAMPYLLGEPALVLSKLEGEEAFSTL---------YSYTITAKTPASNVDLKSLIGKEMTIEMELDGNGTREITGLVERARYIGRDANQAIFEITIKPWFYLANLTSDFKIYQNKNVVDIIEEVFSDYNF-PFEKRLATTYPILDFQVQYGETDFNFLQRLMEEWGIYWFFEHQDHKQKLILVDHVGAHKRSFSAIEYLS-DEPKAGEEYITQFQTQETLTSGTWVTNDYDFTKSRADILAMDSK-PRKTSFNDLEIYHWPGDYDQPDIGEHLSRVRIEERGALGSRAVGSGQLRGIVCGANFELKGFPVDKANREYMIISSRLTVAEVDQLS--GGEDAFSCESSFTVQPTTKIYRHPQTPKPKTNGPQNAIIVGPPGEEIWTDEYGRVKVRFVWDRYGTNSESDSCWLRVSQAWAGNSFGGIYIPRIGQEVIVDCINGDPDRPMVMGSLYNNVTRPPWDLPANATQSGMVSRTVGGGNYNGVRFEDKSGLEQYWEQAERDMSRLTKNNETQIIGADSVLNVGANRSEVVGANYNQDVLGTSMLAIGAASMLQVGLARSVVVGGAHSLNVVLANATNVGGANMTNVGGFNGLAVGGAHQTAVGGAATLAGGPIAIGAGGELILSGDIVKIVGKSK---VIIQGGEVHINSDDCCGRKTGNGGGAFGAFASLAGLLPLAGAIALPLPLPLLPIVVPPVTSPPD-----PTVPPDPTLPPDPTLPPDPTLPPETTAPPETTAPPETTAPPETTAPPE................................................................................................................................................................................................................................................................... 770
14 -144.000IDP04459 conserved hypothetical protein [Yersinia pestis CO92] YPO1472 [Yersinia pestis CO92]  ali follow..  17  10FDHSHHKLVV-RDSTAAVDVLGFEGHESLSQP---------FCYDIQFTSADKAIGPATMLMHDASLTLAAPQQTQRVIQGVVTGFKRLSASKEECRYELSLQPRLALLSRSHQNGIYQDMSVPQIVEKILRERHDQDFVFTLAREYPRREQVMQYGEDDLTFIRRLLAEVGIWFRFTADPKLNIDVVEFYDDQRFYQQGLTLVPPSGMHDSGMESVWDLSSAHQVVEKSVSTGDYNYRTATADLTAGADI-TRGDTTTYGEAYHYADNYPESESGAFYARLRHERYLNNQARFAGVANAAALAPGQELNVTGNDVPAQFGKVIITRITSHARRDR-----------SYEVHFEAIPYSEDYCPALIRKPTMAGTLPARVTSTTANDGHIDKDGRYRVNLMFDRDSWESGYESLWVRQARPYAGDSYGLHLPLLAGTEVAIAFEDGNPDRPYIAYVLHDSAHGDHVTIS------NYKRNVLRTPSNNKLRLEDERGKEHIKLSTEYGGKSQLNLGHLVDNEKQEGFELRTDSFGVLRAEKGLFITADGQAKAQGQVLEMQPAISLLKSAQEQMEAISADAQTATASPADLQVQISLL---------------------------QQNLTELKQAVLLLSAPKGIALSSGEHLQMSASDNLIATAGKNADVSVAKNFFIGVGNTLSIFVRKLGMKLIANQGPITVQAQ---NDLMELLARKAITITSTEDEIKITAKKRITLNAGGSYITLDENR-IESGTAGEYLTKAGYYGRLDKAKLPTEFPALAAKTED.................................................................................................................................................................................................................................... 774
15 -9.370CPX_91702_91677 Complex of EZRI_HUMAN with M1_I34A1 [Undefined organism]  ali follow..  4....................................................................................................PINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTIGL---------------------EVWY-FGLHYVDNKGFPTWLKLDKKVSAQEVRKENP-------RAKFYPEDVAEELIQDITQKQVKEGILSDEIYCPP-----------------ETAVLLGSYAVQAKFGDYNKEVHKSGYLS--------------------RLIPQRVMDQHKLTRDQWEDRIQVWHAEHRGMLKDNAM-----------EYLKIAQDLEMYGINYFEIKNKKGTDLWLGVDALGLNIYEKD--KLKIGFPWSEIRNISNDKKFVIKPIDK---------------KAPDFVFYRLRINKRILQLCMGNHELYMRRRKPDTIEVQQMKAQA------REEKHQKQLERQQLETEKKRRETVEREKEQMMREKEELMLRLQDYEEKTKKAERELSEQIQRALQLEEERKRAQEEAERLEADRMAALRAKEELERQAVDQIKSQEQLAAELAEYTAKIALLEEARRRKEDEVEEWQHRAKEAQDDLVKTKEELHLVMTAPPPPPPPVYEPVSYHVQESLQDEGAEPTGYSAELSSEGIRDDRNEEKRITEAEKN-QARDENKRTHNDIIHNENMRQGRDKYKTLRQIRQGNTKQRIDEFEALXMSLLTEVETYVLSIIPSGPLKAEIAQRLEDVFAGKNTDLEVLMEWLKTRPILSPLTKGILGFVFTLTVPSERGLQRRRFVQNALNGNGDPNNMDKAVKLYRKLKREITFHGAKEISLSYSAGALASCMGLIYNRMGAVTTEVAFGLVCATCEQIADSQHRSHRQMVTTTNPLIRHENRMVLASTTAK-AMEQMAGSSEQAA-----E--AMEVA-SQARQMVQAMRTIGTHPSSSAGLKN-DLLENLQAY----QKRMGVQMQR...... 837

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Sasin JM, Godzik A, Bujnicki JM. SURF'S UP! - protein classification by surface comparisons. J Biosci. 2007 Jan;32(1):97-100.