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Query: IDP95473 hypothetical protein EF2671 [Enterococcus faecalis V583] NP_816307 [Enterococcus faecalis V583], from CSGID

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKFKEIEGSTMEREWELFLAPYEQAVSELKVKLRGIRKQFREQDKHIPIEFVTGRVKPVDSILTKTAIRHIPLNRIEEEMQDIAGLRIMCQFVEDIYQVVALLRNRKDLKIVEERDYIENKKESGYRSYHVVVEYPVQLVTGEKIILAEIQIRTLSMNFWATIEHSLNYKYQGVFPEEMKERLQRAAEAAYLLDEEMSSIREEIQEAQHYFSHGRGLLENEYYKQIKNETPENQLast
1 -97.900IDP95473 hypothetical protein EF2671 [Enterococcus faecalis V583] NP_816307 [Enterococcus faecalis V583]  ali  100  1MKFKEIEGSTMEREWELFLAPYEQAVSELKVKLRGIRKQFREQDKHIPIEFVTGRVKPVDSILTKTAIRHIPLNRIEEEMQDIAGLRIMCQFVEDIYQVVALLRNRKDLKIVEERDYIENKKESGYRSYHVVVEYPVQLVTGEKIILAEIQIRTLSMNFWATIEHSLNYKYQGVFPEEMKERLQRAAEAAYLLDEEMSSIREEIQEAQHYFSHGRGLLENEYYKQIKNETPENQ 234
2 -82.400IDP95475 GTP pyrophosphokinase [Streptococcus mutans UA159] NP_721439 [Streptococcus mutans UA159]  ali follow..  61  2.............NWEEFLDPYIQAVGELKIKFRGIRKQFRKQKRHSPIEFVTGRVKPIESIKEKMVLRGIKKENLTQDMQDIAGLRIMVQFVDDVNDVLELLRQRKDMKVIQERDYINNLKPSGYRSYHVIVEYPVDTISGQRIIMAEIQIRTLAMNFWATIEHSLNYKYHGEFPEDIKRRLELTSKIAFQLDEEMRQIRDDIKEAQLLFDAETRKLND.............. 208
3 -50.900IDP05203 hypothetical protein CD1708 [Clostridium difficile 630] CD1708 [Peptoclostridium difficile 630]  ali follow..  18  1MGLKEFD-EESIDMLRTMSPTLETISDEIEEYFENILDE-----KNQEYINVTSRIKSESSLREKIIRNRYEASNLIHNVSDLIGLRIECRFIEDENKIYRLLRRYFNKTDDKINYYLSERQPNKQKNGFEIYKIDGVFAYLDREVKFELQIKSLVNVFWSEIEHKIIYKNNTYLLKFIKDMMDSIKNNLTMIDNQLLSIYKNFHSGKSFNMKVSKKEIEKLFAKL........ 239
4 -45.100IDP04269 gene: relA; GTP pyrophosphokinase [Clostridium perfringens ATCC 13124] CPF_2193 [Clostridium perfringens ATCC 13124]  ali follow..  20  183LCLRYIHPEEYYDLVNMIAEKRVEREKFISRIIEELKENLDKANID---SDIEGRPKHFYSIYRKMVNKHKSI----EQIFDLTAIRILVNTVKDCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVI-------GSEGKTFEIQIRTFEMHRTAEYGIAAHWKYKSGVTGTDSKDMTFENKL-----TWLRDILEWQKEAVDATEFMEGFKLDLFSDEIFVFTPKGV 397
5 -44.200IDP02040 gene: relA; GTP pyrophosphokinase [Bacillus anthracis str. `Ames Ancestor`] GBAA4637 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  22  190TSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVMTGIREKLDEVAIQ---PEISGRPKHIYSIYRKMALQNKQF----NEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTTVI-------GPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTGTLEK---------TWFRQILEWQNEASNAEEFMESLKIDLFSDMVFVFTPKGD 402
6 -44.000IDP05744 gene: relA; putative GTP pyrophosphokinase [Clostridium difficile 630] CD2744 [Peptoclostridium difficile 630]  ali follow..  20  187RALRFMDPEGYYDLVSRVSMKRSQREDYIQGIVELLKDKFKDLSIP---CDVYGRPKHFYSIYRKMQKKHKTF----EEIFDLTAVRILVDNVKDCYAVLGIVHTLWRPIPGRFKDYIAMPKPNMYQSLHTTVV-------GPDGEPLEIQIRTHEMHNIAENGIAAHWKYKEGISSKESKVEEKLQ---------LRQMMEWEKDLKDPQEFMDALKEDVFNSQVYVFTPKGD 398
7 -43.700IDP01729 gene: spoT; guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase/(p)ppGpp synthase [Francisella tularensis subsp. tularensis SCHU S4] FTT0808 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  18  188LAFEGMYPYRYHILEEKVKKVEKNKEKVFYEVKEALAEKLNDLVSL---EDIKARKKTLYSIYNKMRKKGISF----DEIMDMYAYKIIVPNRIDCYVALGKVHELYKPIPQKFKDYIATPKANGYRSLHTVVL-------GPYNIPLEIQIKTEQMDRQAEYGIAAHWSYKIGEKTDKALQ------------RWLKKISDINVYTASSVEFLENVKTDIFNNDVFVFTPQGE 395
8 -43.600IDP02827 gene: relA; GTP pyrophosphokinase [Francisella tularensis subsp. tularensis SCHU S4] FTT1508c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  21  202RAFFFLQQDEYKRIAKSLGVTRKQREDFLHQVIQELKSTLKKYNLH---AGIQGRVKHIYSIYKKFKNKG---YQELDDLYDITAVRVITNNVDECYKVLAEVNNLYSPIPEEFSDYIAHPKPNGYKSIHTVV--------KVGEQNIEVQIRTQQMHEESELGFAAHWRYKEGVKFD------------ASYEARVAWLRSLL-EWEKEINEDDSQITKELNKKLYVFTPANE 408
9 -35.100IDP95474 hypothetical protein VC1224 [Vibrio cholerae O1 biovar El Tor str. N16961] NP_230869 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  16  58IANQNYPIVQPYQDFDVLYSKAHQAQIELETLCKSTALLTHT-------QAYFAGTKSRQRALEKVELE---LDGQAERITDLARATIVAHDVASLVTAYETLSREATVV--KVKNRFKNPAESGYRDLNVLVQLPK------TGIIAEVQLHLAAIAQVKSGAEHELYEQIQTIERTARQEQRELTEWENAQIAKMRSASRDL.............................. 243
10 -6.540IDP05363 hypothetical protein BA_2032 [Bacillus anthracis str. Ames] BA_2032 [Bacillus anthracis str. Ames]  ali follow..  13  59...........................................................DYLYVKVSEVGTPDSYSETLTIN--GVRYAGSSLDEVSSYTGPFGSEKTFRLRIKDSYIFSNTPNSTNTIAFEARVPFSMQVLSKNISVHVE................................................................................... 148

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.