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Query: IDP00597 gene: murI; glutamate racemase YPO3909 [Yersinia pestis CO92], from CSGID

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MATKPQDANTTSREAITSKADSPPRPTALIFDSGVGGLSVYQEIRQLLPDLHYIYAFDNVAFPYGEKSGEFIVERVLEIVTAVQQRHPLAIVVIACNTASTVSLPALRERFAFPVVGVVPAIKPAVRLTRNGVVGLLATRATVHASYTLDLIARFATDCKIELLGSSELVEVAETKLHGGVVPLEVLKKILHPWLSMREPPDTIVLGCTHFPLLTEELAQVLPEGTRMVDSGAAIARRTAWLISSQENVISSQDENIAYCMALDEDTDALLPVLQSYGFPKLQKLPILast
1 -7.090sp|P14061|DHB1_HUMAN Estradiol 17-beta-dehydrogenase 1 OS=Homo sapiens GN=HSD17B1 PE=1 SV=3  ali follow..  15  12...............................SSGIGSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHT---------FHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAPK........................................ 249
2 -6.990sp|Q9Y6N5|SQRD_HUMAN Sulfide:quinone oxidoreductase, mitochondrial OS=Homo sapiens GN=SQRDL PE=1 SV=1  ali follow..  9  28.........GPLQLHTGASHAARNHYEVLVLGGGSGGITMAARMKRKVGAENVAIVEPSERHFYGAKQLSSSGRPTASVIPSGVEKARVTELNPDKNCIHTDDDEKISYRYLIIALGIIKGLPEGFAHPKIGSNYSVK-----TVEKTWKALQDFKEGNAIFTFPNTPV...................................................................................................................... 199
3 -6.710sp|Q8NEC7|GSTCD_HUMAN Glutathione S-transferase C-terminal domain-containing protein OS=Homo sapiens GN=GSTCD PE=1 SV=2  ali   9  1.................................GGGHVGIV--LAHMLPSCQVTLI-KELSLIRAKKRSDELIWFIQANMEYFTGMFNIGVALHACGVATDMVIEHCIKTRASFVTCIQNTSKFNFPKSEQFKKTLSYKEHMILCRFADQTAVQLPPQRRLIGKQCMCLVDLDRARAAEECGYSVQVISMEPESCSPK---NNMIVG................................................................................ 180
4 -6.640sp|P53004|BIEA_HUMAN Biliverdin reductase A OS=Homo sapiens GN=BLVRA PE=1 SV=2  ali follow..  10  2..................NAEPERKFGVVVVGVGRAGSVRMRDLRNPHPSSAFLNLIGFVS----RRELGSIDGVQQISLEDALSSQEVEVAYICSESSSDYIRQFLNAGKHVPMTLSLAAAQELWELAEQKGKVLHEEHVELLMEEFAFLKKEVVGK................................................................................................................................. 143
5 -6.540sp|Q7Z5M8|AB12B_HUMAN Abhydrolase domain-containing protein 12B OS=Homo sapiens GN=ABHD12B PE=2 SV=1  ali follow..  12  114TVPSCRGEDAKGKDCCWYEAALRDGNPIIVYLHGSAEVKVLSDGGFHVLSVDYRGFGDST----GKPTEEGLTTDAICVYEWTKARSGITPVCLSLGTGVATNAAKVLEEKGCPVDAIVNMWVASINYPLLKIYRNIPGFLRTLMDALRKDKIIFPNDENVKFLSSPLLILHGEDDRTVPLEYGKKLYEIARNAYRNKERVKMVIFGFQHSPTLLITVRDFLSKQWS............................................................ 362
6 -6.530sp|Q9Y4L1|HYOU1_HUMAN(removed signalp:1-32) Hypoxia up-regulated protein 1 OS=Homo sapiens GN=HYOU1 PE=1 SV=1  ali   16  84..............................FDRTLGGLEMELRLRE--------RLAGLFNEQRKGQRAKDVRENPRAMAKLLREANRLKT-VLSANADHMAQIEGLMDDVDF--------------------------KAKVTRVEFEELCADLFERVP------------------------GPVQQALQSAEMSLDEIEQVILGATRVPRVQEVLLKAVGKE-KNINADEAAA................................................... 234
7 -6.510sp|Q02338|BDH_HUMAN D-beta-hydroxybutyrate dehydrogenase, mitochondrial OS=Homo sapiens GN=BDH1 PE=1 SV=3  ali follow..  15  64...............................DSGFGGFLVFAGCLMKDKGHDGVKELDSLNVQLNVCSSEEVEKVVEIVRSSLKDPEKGMWGLV--NNAGITSLETYKQVAEVNLWGTVRMTKPLIRRAKGRVVNISSMLGRMANPARKFGVEAFSDCLRYEMYPLGVKVSVVEPGNFIAATSLYSPESIQAIAKKMWEELPEVVRKDYGKKYFDEKIAKMETYCSSGSTDTSPVIDAVTHALTAT......................................... 309
8 -6.420sp|Q8NEC7|GSTCD_HUMAN Glutathione S-transferase C-terminal domain-containing protein OS=Homo sapiens GN=GSTCD PE=1 SV=2  ali   11  116MSSDRALRKQQQLNNLVYVVTNQAKPGDRIVDFCSGGGHVGIVLAHMLPSCQVTLI-KELSLIRAKKRSDELIWFIQANMEYFTGMFNIGVALHACGVATDMVIEHIKTRASFVTCPIQNTSKFNFPKSEQFKKTLSYKEHMILCRFADQTAVQLPPQRRLIGKQCMCLVDL................................................................................................................... 298
9 -6.330sp|Q9BPW9|DHRS9_HUMAN(removed signalp:1-17) Dehydrogenase/reductase SDR family member 9 OS=Homo sapiens GN=DHRS9 PE=1 SV=1  ali follow..  13  21...............................DSGFGGFHVIAACLTESGSTALKAETSERLRTV-DVTDPENVKRTAQWVKNQVGEKGLWGLI---NNAGVPGLEDYREPIEVNLFGLISVTLPLVKKAQGRVINVSSVGGRLAIVPSKYAVEGFNDSLRRDMKAFGVHVSCIEPGLFKTNLADP--VKVIEKKLAIWEQLSPDIKQQYGEGYIEKSLDKLKGNKSYVNMDLSPVVECMDHALTSL......................................... 258
10 -6.300sp|P22570|ADRO_HUMAN(removed signalp:1-24) NADPH:adrenodoxin oxidoreductase, mitochondrial OS=Homo sapiens GN=FDXR PE=1 SV=3  ali follow..  13  1...........TPSFCHHFSTQEKTPQICVVGSGPAGFYTAQHLLKHPQAHVDIY--EKQPVPFGVAPDHPEVKNVINTFTQTAHSGRCAFW---VEVGRDVTVPELREAYHAVVL--------SYGAEDHRALEIPGLPGVCSARAFVGWYNGLPENQELEPDLSCDTAVILGQGNVALDVARILLTP.................................................................................................. 174
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Grynberg M, Erlandsen H, Godzik A. HEPN: a common domain in bacterial drug resistance and human neurodegenerative proteins. Trends Biochem Sci. 2003 May;28(5):224-6. Review.