current user: public

If you have questions about the server, please let us know.

Query: IDP05533 hypothetical protein CD2149 [Clostridium difficile 630] CD2149 [Peptoclostridium difficile 630], from CSGID

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .  320    .  330    .  340    .  350    .  360    .  370    .  380    .  390    .  400    .  410    .
# Score Template Links and tools%idFirst MGRRTTRVSRLGKEKKRSVLIVLAALVLIMGGFTYFFNSKFLYNGKIAKNVYIEGVNVSDMTKAEALKAITDKYTPEDLNLAYDGKKYTISPKDIDLKYDTEDVVKDAYESTKKGSYFQNLKKYIDIRVNKANMKIKAEYDEAKLSSKVSSIADSINVKMKNASISVGSGGLSYTDSVVGREFDLAANKESIYNMIKNKEHKTLELKVNLQKPDITTEQVKTVNSVIGQYSTTYSQAVEGRSYNVGLSARKTSDVLLMPGEEFSYNKLTGPSNKANGYKDAPVIVYGKLEQSAGGGVCQTSSTVYNAALLSGMEITQVTNHSSASTYVPKGRDATVSDGGLNLKFKNPYKHPVYIKNYAGGGSVSSVIYGNSGDKPNISIEVKQTGQNKYSTYRIFKDSNGKVIKKEHISNSSYKELKKLast
1 -6.380sp|O43187|IRAK2_HUMAN Interleukin-1 receptor-associated kinase-like 2 OS=Homo sapiens GN=IRAK2 PE=1 SV=2  ali   11  164....................................................................................................................................................................................................................................SLRSDLPTSSDSKDFSTSIPKQEKLLSLAGDSLFWSEADV---VQATDDFNQNRKI-------SQGTA------DVYRGHRQAELQICLRCCHPNVLPVL--G-------------FCAARQFHSFIYPYMANGSLQDRLQG................................................. 300
2 -6.330sp|O14976|GAK_HUMAN Cyclin-G-associated kinase OS=Homo sapiens GN=GAK PE=1 SV=2  ali   16  150.....................................................................................................................................................................................................................TIAEMRKQDLAKDTDPLKLKLLDWIEGKERNIRALLSTLH-TVLWDGESVGMADLVAPEQVKKHYRRAVLAVHPDKAAGQP----QHAKMIFMEL-----------------------NDA---------EFENQGSRPLF................................................................. 261
3 -6.280sp|Q494R0|YP028_HUMAN Putative uncharacterized protein encoded by NCRNA00095 OS=Homo sapiens GN=NCRNA00095 PE=5 SV=1  ali follow..  16  22...................................................................................................................................................................................................................................SPLSTTLGTSPACGLEIPPTSGARPDGSCSLPAPVYHLKSRQW-KGMGRGYRQRWRL---------GRGDCDMGCVVQASGLFP-AEMRERTTKKMATSPLDLCAGA..................................................................................... 118
4 -6.140sp|Q9BRP9|YK016_HUMAN Putative uncharacterized protein MGC13053 OS=Homo sapiens PE=2 SV=2  ali follow..  20  1..................................................................................................................................................................................................................MQPSWTPAPVQRTACNITAWGGEFGKEGEGRCEQVALSSGPPEGAL-QPPGAENLRPSTGETFVQSG--------DGGWRGAMKGRRHRQASTIFVPTAQDGAQMV--KAHTRTTQYTE--QDSVVARGLLDAK........................................................................... 139
5 -6.040sp|O75061|AUXI_HUMAN Putative tyrosine-protein phosphatase auxilin OS=Homo sapiens GN=DNAJC6 PE=1 SV=3  ali   12  52.....................................................................................................................................................................................................................TIAEMRKEEMAKEMDPEKLKILEWIEGKERNIRALLSTMH-TVLWAGETVGMADLVTPEQVKKVYRKAVLVVHPDKATGQP----QYAKMIFMELNDAWSEFENQGQKPL................................................................................................ 162
6 -5.690sp|O75061|AUXI_HUMAN Putative tyrosine-protein phosphatase auxilin OS=Homo sapiens GN=DNAJC6 PE=1 SV=3  ali   12  202..............................................................................................................................................................................................................TIAEMRKEEMAKEMDPEKLKILEWIE-------GKERNIRALLSTMH-TVLWAGETVGMADLVTPEQVKKVYRKAVLVVHPDKATGQP----QYAKMIFMELNDA............................................................................................................ 300
7 -5.570sp|Q8TDX9|PK1L1_HUMAN Polycystic kidney disease protein 1-like 1 OS=Homo sapiens GN=PKD1L1 PE=2 SV=1  ali   96.................................................................................................................................................................................................................................................SSGITEQTVTIKPYSLSSGETYVLQVSVASKHGLLGKAQLYLTVNPA------DMACQVQPH--GLEAHTVFSVF-KPDFHYEFSYQIGNTSKHTLYHGRD----TQYYFVLPAGEHLDNYKVMVSTKGSKVQPCTVVVTVLPRYHGNDCLGEDLYNSSLKNLSTLQLMGSYTEIRN. 271
8 -5.550sp|Q9P2N4|ATS9_HUMAN(removed signalp:1-18) A disintegrin and metalloproteinase with thrombospondin motifs 9 OS=Homo sapiens GN=ADAMTS9 PE=2 SV=4  ali   132...............................................................................................................................................................................PTECPYNGSRRDDCQCRKDYTAAGFSSFQKIRIDLTSMQIITTDLQFARTSEGHPVPFATAGDCYSAAKCPQGRFSIN----LYGTGLSLTESA----ISQGNYAVSDIKDGTRVVGKCGGYCGKCTPSSGTGLEVRV.......................................................................................................... 266
9 -5.320sp|Q99798|ACON_HUMAN Aconitate hydratase, mitochondrial OS=Homo sapiens GN=ACO2 PE=1 SV=2  ali   13  35........................................................................................................................................................................................................DQLIEINLSELKPHITPDLAHPVAEVGKVAEKEIGSCTNSSYEDMGRSAAVAKQFTITPG-----SEQIRATIERDGYAQI-LRDLGGIVLANACGPCIGQWDRKDIKKGEKNTIVTSYNRNFT-GRNDANPETHAF-----------VTSPEIVTALAIAGTLKFN.................................................... 208
10 -5.240sp|O95405|ZFYV9_HUMAN Zinc finger FYVE domain-containing protein 9 OS=Homo sapiens GN=ZFYVE9 PE=1 SV=2  ali   12  8.........................................................................................................................................................................................GNNTKNKNDILGKAKLGENSATNVCSPSLGNISNVDTNGEHLESYEAEISTRPCLALAPDSPDNDLRAG---------QFGISARKPFTTLG-EVAPVWVPDSQAP-----NCMKCEARFT--------FTKRRHHCRACGKV-----ASCCSLKCKLLYMDRKEARV.................................................................. 149

FFAS is supported by the NIH grant R01-GM087218-01
1 4 0 1 8 1   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Wooley JC, Godzik A. Probing metagenomics by rapid cluster analysis of very large datasets. PLoS ONE. 2008;3(10):e3375. Epub 2008 Oct 10.