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Query: IDP06256 gene: glyQ; glycyl-tRNA synthetase subunit alpha [Streptococcus pneumoniae TIGR4] NP_345929 [Streptococcus pneumoniae TIGR4], from CSGID

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSKKLTFQEIILTLQQFWNDQDCMLMQAYDNEKGAGTMSPYTFLRAIGPEPWNAAYVEPSRRPADGRYGENPNRLYQHHQFQVVMKPSPSNIQELYLESLEKLGINPLEHDIRFVEDNWENPSTGSAGLGWEVWLDGMEITQFTYFQQVGGLATGPVTAEVTYGLERLASYIQEVDSVYDIEWADGVKYGEIFIQPEYEHSKYSFEISDQEMLLENFDKFEKEAGRALEEGLVHPAYDYVLKCSHTFNLLDARGAVSVTERAGYIARIRNLARVVAKTFVAERKRLGYPLLDEETRAKLLAEDAELast
1 -54.400sp|P49588|SYAC_HUMAN Alanyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=AARS PE=1 SV=2  ali   16  1MDSTLTASEIRQRFIDFFKRNEHTYVHSSATIPNAGMNQFKIFLNTIDPSHSRAANTQKCIRAGGGKDVYHHTFFEMLGSWSFGD-YFKELACKMALELLTQENLGLDDTKIL-KDNFWEMGDTGPCGPCSEIHYD-LEIWNLVFIQYNREKPLPKKSIDTGMGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTG--------------------------------KVGAEDADGIDMAYRVLAD.................................................... 300
2 -47.000sp|Q5JTZ9|SYAM_HUMAN Alanyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=AARS2 PE=1 SV=1  ali   17  34.PPAAKASAVRAAFLNFFRDRGHRLVPSASVRPNAGMNQFKIFLGTVDPRSRRVANSQKCVRAGGGRDLSHHTFFEMLGNWAFGGEYFKEEACNMAWELLTQVSLGVPASRVL-QENFWEMGDTGPCGPCTEIHYD-VELWNLVFMQHNREQPLPQRHVDTGMGLERLVAVLQGKHSTYDTDLFSPLLNAIQQGC.............................................................................................................. 300
3 -39.700sp|Q5JTZ9|SYAM_HUMAN Alanyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=AARS2 PE=1 SV=1  ali   17  56..................................................................................................................QENFWEMGDTGPCGPCTEIHYD-VELWNLVFMQHNREQPLPQRHVDTGMGLERLVAVLQGKHSTYDTDLFSPLLNAIQQGCRAPPYLGRVGVA---------------------DEGRTDTAYRVVADHIRTLSVCISDGIFPGMSGPPLVLRLRRAVRFSMEI-VVETLGDAYPELQRNSAQIANLVSED 254
4 -39.600sp|P49588|SYAC_HUMAN Alanyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=AARS PE=1 SV=2  ali   17  2...............................................................................................CKQIWQNLGLDDTK-PGNMKDNFWEMGDTGPCGPCSEIHYD-LEIWNLVFIQYNREKPLPKKSIDTGMGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAE---------------------DADGIDMAYRVLADHARTITVALADGGRPDNTGRGYVLRLRRAVRYAHEK-VVQSLGDAFPELKKDPDMVKDIINEE 228
5 -13.100sp|Q5JTZ9|SYAM_HUMAN Alanyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=AARS2 PE=1 SV=1  ali   20  13....................................................................................................................................................................................................................................DEGRTDTAYRVVADHIRTLSVCISDGIFPGMSGPPLVLRLRRAVRFSMEILKAPPGFLGYPELQRNSAQIANLVSED 104
6 -10.600sp|P49588|SYAC_HUMAN Alanyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=AARS PE=1 SV=2  ali   19  1..................................................................................................................................................................................................................................................HARTITVALADGGRPDNTGRGYVLRLRRAVRYAHEK-VVQSLGDAFPELKKDPDMVKDIINEE 78
7 -8.430sp|Q9NYC9|DYH9_HUMAN Dynein heavy chain 9, axonemal OS=Homo sapiens GN=DNAH9 PE=1 SV=3  ali   10  51..............................LVHTSETIRVCYFMERLMARQRPVMLV--------GTAGTGKSVLVGAKLASLDPEAYLVKNVPFNYYTTSAMLQAVLEKPLEKKAGRNYGP---PGNKKLIYFIDDMNMPEVDAYGTVQPHTIIRQHLDYGHWYDRSKLSLKEITNVYVSCMNPTAGSFTINPRLQRHFSVFVLSFPGADALSSIYSIITQHLKLGNFPASLQKSIPPLIDLALAFHQKIATTFLPTGIKFHYIFNLRDFANIFQGILFSSVECV................... 297
8 -8.040sp|Q8IVF4|DYH10_HUMAN Dynein heavy chain 10, axonemal OS=Homo sapiens GN=DNAH10 PE=1 SV=4  ali   13  28..............................LVHTVDTTRTTWILEQMVKIKQPVIFV--------GESGTSKTATTQ----NFLKNLSEETNIVLMVNFSSRTTSMDIQRNLEANVEKRTKDTYGPMGKRLLVFMDDMNMPRVDEYGTQQPIALLKLLLEKGYLYDR------NCKSIRDLGFIAAM-RNEVDPRFISLFSVFNVPFPSEESLHLIYSSILKGHTSTFHESIVAVSGKLTFCTLALYKNIVQD-LPPTPSKFHYIFNLRDLSRVFNGLVLTNPERF................... 274
9 -8.000sp|Q9UFH2|DYH17_HUMAN Dynein heavy chain 17, axonemal OS=Homo sapiens GN=DNAH17 PE=2 SV=2  ali   14..............................LVHTTETIRIRYFMDLLMEKSWPVMLV--------GNAGTGKSVLMGDKLESLNTDNYLVQAVPFNFYTTSAMLQGVLEKPLEKKSGRNYGP---PGTKKLVYFIDDMNMPEVDKYGTVAPHTLIRQHMDHRHWYDRHKLTLKDIHNCYVACMNPTSGSFTIDSRLQRHFCVFAVSFPGQEALTTIYNTITQHLAFRSVSMAIQRISSQLVAAALALHQKITATFLPTAIKFHYVFNLRDLSNIFQGLLFSTAEVL................... 260
10 -7.840sp|Q9Y285|SYFA_HUMAN Phenylalanyl-tRNA synthetase alpha chain OS=Homo sapiens GN=FARSA PE=1 SV=3  ali follow..  12  317..................DEARKNLLRTHTTSASARALYRLAQKKPFTP---KYFSIDRVFR-NETLDATHLAEFHQIEGVVADHGLTLGHLMGVLREFFTKLG----ITQLRFKPAYNPYTE-----PSMEVFSKWVEVGNSGVFRPE-GLPENVSVIAWGLSLERPTMIKYGINNI............................................................................................................................... 474

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;