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Query: IDP90826 gene: alaS; alanyl-tRNA synthetase [Yersinia pestis CO92] YPO3305 [Yersinia pestis CO92], from CSGID

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSKSTAEIRQAFLDFFHSKGHQVVSSSTLVPNNDPTLLFTNAGMNQFKDVFLGLDKRAYSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKHDAINFAWELLTSEQWFNLPKEKLWVTVYETDDEAYNIWANEVGVPHERIIRIGDNKGGAFASDNFWQMGDTGPCGPCSEIFFDHGDHIWGGPPGSAEEDGDRYIEIWNIVFMQFNRQSDGTMLPLPKPSVDTGMGLERIAAVLQHVNSNYEIDLFRDLIAAVADVTGATDLSSKSLRVIADHIRSCAFLISDGVIPSNENRGYVLRRIIRRAIRHGNMLGAKETFFYKLVAPLIAVMGPAAAELKQQQAMVEQVLKTEEEQFARTLERGLALLDDELSKLTGDTLDGETAFRLYDTYGFPVDLTADVCRERNLKVDEAGFEQAMEAQRRRARESSGFGADYNSLIRVDSASQFSGYDHVQQHATVTALFRNGEAVDEIHAGEEAVVVLNRTPFYGESGGQVGDKGELKNATATFSVTDTQKYGQAIGHVGILTTGTLRVNHSVEALVDVVRRNRIRLNHSATHLLHAALRNVLGEHVAQKGSLVNDKYLRFDFSHFEAMKPEQIRLVEDLVNEQIRRNMPVQTEVMELDAAKEKGAMALFGEKYDDQVRVLTMGDFSTELCGGTHASRTGDIGLFRILTESGTAAGIRRIEAVTGEGAIALLHQQSDLLQDVAHLVKGDIHNLADKVRAVLDRSKMLERELQQLKDQQAAQESASLSSSAKLINGVKLLVSQLDNVEPKMLRTMVDDLKNQLGSAIIVLATTADDKVSLIVGVTKDLTGKVKAGELIADIAQQVGGKGGGRPDMAQAGGTDVQALPAALASVEAWVASRMLast
1 -101.000sp|P49588|SYAC_HUMAN Alanyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=AARS PE=1 SV=2  ali   47  4.TLTASEIRQRFIDFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLT--QEFGIPIERLYVTYFGGDLECKQIWQN-LGLDDTKILPGN-------MKDNFWEMGDTGPCGPCSEIHYDRIGG--RDAAHLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTGMGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLAD.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 300
2 -93.300sp|Q5JTZ9|SYAM_HUMAN Alanyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=AARS2 PE=1 SV=1  ali   48  35PAAKASAVRAAFLNFFRDRGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRFRRVANSQKCVRAGGHHNDLEDVGRDLSHHTFFEMLGNWAFGEYFKEEACNMAWELLT--QVYGIPEERLWISYFDGDLETRDIWLS-LGVPASRVLSFGP-------QENFWEMGDTGPCGPCTEIHYDLAG----------GVGAPQLVELWNLVFMQHNREADGSLQPLPQRHVDTGMGLERLVAVLQGKHSTYDTDLFSPLLNAIQQGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 300
3 -89.000sp|P49588|SYAC_HUMAN Alanyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=AARS PE=1 SV=2  ali   43  1.........................................................................................................................................ECKQIWQN-LGLDDTKILPGNM-------KDNFWEMGDTGPCGPCSEIHYDRIGGRDAA--HLVNQDDPNVLEIWNLVFIQYNREADGILKPLPKKSIDTGMGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPGIDMAYRVLADHARTITVALADGGRPDNTGRGYVLRRILRRAVRYAEKLNASRGFFATLVDVVVQSLGDAFPELKKDPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ.......................................................................................................................................................................................................................................................................................................................................................................................................................................................... 299
4 -84.900sp|Q5JTZ9|SYAM_HUMAN Alanyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=AARS2 PE=1 SV=1  ali   39  1.............................................................................................................MAWELLT--QVYGIPEERLWISYFDGDPETRDIWLS-LGVPASRVLSFGP-------QENFWEMGDTGPCGPCTEIHYDLAG----------GVGAPQLVELWNLVFMQHNREADGSLQPLPQRHVDTGMGLERLVAVLQGKHSTYDTDLFSPLLNAIQQGCRAPPRTDTAYRVVADHIRTLSVCISDGIFPGMSGPPLVLRRILRRAVRFSEILKAPPGFLGSLVPVVVETLGDAYPELQRNSAQIANLVSEDEAAFLASLERGRRIIDRTLRTLGSDMFPAEVAWSLCGDLGLPL..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 300
5 -74.700sp|P49588|SYAC_HUMAN Alanyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=AARS PE=1 SV=2  ali   36  2......................................................................................................................................................................................................................................................................................................................................................................................................................SQGKGAGGEDLIMLDIYAIEELRARGLEVTDDSPKYNYH---------LDSSGSYVFENTVATVMALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDDSFTVKNAQVRGGYVLHIGTI-YGDLKVGDQVWLFIDEPRRRPIMSNHTATHILNFALRSVLG-EADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANEMIEAAKAVYTQDCPLAAAKAQGLRAVFDETYPDPVRVVSIGVTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIR...................................................................................................................................................................................... 300
6 -69.800sp|Q5JTZ9|SYAM_HUMAN Alanyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=AARS2 PE=1 SV=1  ali   25  2.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................HEAVAPECLRLGDQVQLHVDEAWRLGCMAKHTATHLLNWALRQTLGPGTEQQGSHLNPEQLRLDVTTQTPLTPEQLRAVENTVQEAVGQDEAVYMEEVPLALTAQVPGLRSLDEVYPDPVRVVSVGQTSVELCCGTHLLRTGAVGDLVIIGDRQLSKGTTRLLAVTGEQAQQARELGQSLAQEVKAATERLSLGSRDVAEALRLSKDIGRLIEAVETAVMPQWQRRELLATVKMLQ--RRANTAIRKLQMGQAAKKTQELLERHSKGPLIVDTVSAESLSVLVKV......................................................... 299
7 -69.700sp|P49588|SYAC_HUMAN Alanyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=AARS PE=1 SV=2  ali   38  1..............................................................................................................................................................................................................................................................................................HARTITVALADGGRPDNTGRGYVLRRILRRAVRYAHELNASRGFFATLVDVVVQSLGDAFPELKKDPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKSQGKGAGGEDDDSPKYNYHLDSSGSYVFENTVATVMALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDDSFTVKNAQVRGGYVLHIGTI-YGDLKVGDQVWLFIDEPRRRP............................................................................................................................................................................................................................................................................................................................ 300
8 -69.500sp|Q5JTZ9|SYAM_HUMAN Alanyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=AARS2 PE=1 SV=1  ali   28  1......................................................................................................................................................................................................................................................................................................................................................................................................................DMVELMLEEKGVQLDSAGLERAQEEAQHRARQAEPVQKQDDSPKYNYSLRPSGSYEFGTCEAQVLQLYEDGTAVASVGKGQRCGLLLDRTNFYAEQGGQASDRGYLVRAGQEDVLFPVARAQGGFILHEAVAPECLRLGDQVQLHVDEAWRLGCMAKHTATHLLNWALRQTLGPGTEQQGSHLNPEQLRLDVTTQTPLTPEQLRAVENTVQEAVGQDEAVYMEEVPLALTAQVPGLRSLDEVYPDPVRVVSVGVPVAHALDPASQAALQ........................................................................................................................................................................................................ 293
9 -64.700sp|Q5JTZ9|SYAM_HUMAN Alanyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=AARS2 PE=1 SV=1  ali   29  12...............................................................................................................................................................................................................................................................................ADEGRTDTAYRVVADHIRTLSVCISDGIFPGMSGPPLVLRRILRRAVRFSMELKAPPGFLGSLVPVVVETLGDAYPELQRNSAQIANLVSEDEAAFLASLERGRRIIDRTLRTLGPSPAEVAWSLSLCGDLGLPLDMVELMLEEKGVQLDSAGLERLAQEEAQHRARQAEPVQKQGLWLDNYSLRPSGSYEFGTCEAQVLQLYEDGTAVASVGKGQRCGLLLDRTNFYAEQGGQASDRGYLVRAGQEFPVARAQVCGGFI........................................................................................................................................................................................................................................................................................................................................................ 300
10 -62.600sp|P49588|SYAC_HUMAN Alanyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=AARS PE=1 SV=2  ali   28  1...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................IMSNHTATHILNFALRSVLG-EADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEIANEMIEAAKAVYTQDCPLAAAKAQGLRAVFDETYPDPVRVVSIGVTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLKKCLSVMEAKVKAQTAPN-KDVQREIADLGEALATAVIPQWQK------------DELRETLKSLKKVMDDLDRASKADVQKRVLEKTKQFIDSNPNQPLVILEMESGAS-----AKALNEALKLFKMHSPQTSAMLFTVDNEAGKIT.............. 300
11 -57.300sp|Q9BTE6|AASD1_HUMAN Alanyl-tRNA editing protein Aarsd1 OS=Homo sapiens GN=AARSD1 PE=1 SV=2  ali follow..  18  13................................................................................................................................................................................................................................................................................................................................................................................................................................................................................EFTTTVVSCCPAELQTEGSEVLSGFQVVLEDTVLFPEGGGQPDDRGTIND----ISVLRVTRRGEQADH---FTQTPLDPGSQVLVRVDWERRFDHMQQHSGQHLITAVADHLFKLKT--TSWELGRFRSAIEL-DTPSMTAEQVAAIEQSVNEKIRDRLPVNVRELSLDDPEEQVSGRGLPDDHAGPIRVVNIEGVDSNMCCGTHVSNLSDLQVIKILGTEKGKKNRTNLIFLSGNRVLKWMERSHGTEKALTALLKCGAEDHVEAVKKLQNSTKILQKNNLNLLRDLAVHIAHSLRNSP---DWGGVVILHRKEGDSEFMNIIANEIGSEETLLFLTVGDEKGGGLFLLAG------PPASVETLGPRVAEVLEGKGAGKKGRFQGKATKMSRRMEAQALLQDYISTQS 409
12 -43.500sp|Q5JTZ9|SYAM_HUMAN Alanyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=AARS2 PE=1 SV=1  ali   22  1...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTHLLRTGAVGDLVIIGDRQLSKGTTRLLAVTGEQAQQARELGQSLAQEVKAATERLSLGSRDRRELLATVKMLQRRANTAIRKLQMGQAAKKTQELLERHSKGPLIVDTVSAESLSVLVKVVRQLCEQAPSTSVLLLSPPMGKVLCACQVAQGAMPTFTAEAWALAVCSHMGGKAWGSRVVAQGTGSTT-DLEAALSIAQTYALSQL 235
13 -36.200sp|P26639|SYTC_HUMAN Threonyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=TARS PE=1 SV=3  ali   12  6....................................................................................................................................................................................................................................................................................................................................................................................................................ASSPSGKMGGEEKPIGAGEEKQKEGGKKKNKEGSGDGGRAELNPW-PEYIYTRLEMYNILKAEHDSILAEKAEKDSKPIK-----VTLPDGKQVDAESWKTTPYQIACGISQGLADNTVIAKVNNVVWD----LDRPLEEDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGCLCYGPPIENGFYYDMYL-EEGGVSSNDFSSLEALCKKIIKEKQAFERLEVKKETLLAMFKYNKFKCRILNEKVTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTMETLQRIYGI................................................................................................................................................................................. 300
14 -31.900sp|P49588|SYAC_HUMAN Alanyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=AARS PE=1 SV=2  ali   21  1.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................RIVAVTGAEAQKALRKAESLKKCLSVMEAKVKAQTAPQKDELRETLKSLKKVMDDLDRASKADVQKRVLEKTSNPNQPLVILEMESGASAKALNEALKLFKMHSPQTSAMLFTVEAGKITCLCQVPQNAARGLKASEWVQQVSGLMDGKGGGKDVSAQATGKNVGCLQEALQLATSFAQLRL 213
15 -19.600sp|Q9BW92|SYTM_HUMAN Threonyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=TARS2 PE=1 SV=1  ali   15  2.................................................................................................................................................................................................................................................................................................................ALYQRWRCLRLQGLQACRLHTAV---------------STPPRWLAERLGLFEELWAAQVKRLASM-------AQKEPRTIKISLPGGQKIDAVAWNTTPYQLARQISST-----------------------------------------------------------------------------LADTAVAAQVNGEPYDLERPLETDSDLRFLTFDSPEGKAVFW-----------------------------HSSTHVLGAAAEQFLGAVLCRGPSTEYGFYHDFFLGKERTIRGSELPVLERICQELTAAARPFRRLEASRDQLRQLFKDNPFKLHLGPTATVYGCGTL-VDLCQGPHLRHTGQIGGLKLLSNSSSPETLQRVSGIS................................................................................................................................................................................ 280
16 -11.800sp|A2RTX5|SYTC2_HUMAN Probable threonyl-tRNA synthetase 2, cytoplasmic OS=Homo sapiens GN=TARSL2 PE=1 SV=1  ali   13  42............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................LAESTVIAKVNGELWDLDRPLEGDSSLELLTFDNEEAQAVYW-----------------------------HSSAHILGEAMELYYGGHLCYGPPIEN-GFYYDMFIEDRAVSSTELSALENICKAIIKEKQPFERLEVSKEILLEM-CRILNEKVNTATTTVYRCGPL-IDLCKGPHVRHTGKIKTIKIFKNSSTMETLQRIYGI----SFPDNKMMRDWEKFQEEAKNRDHRKIGKEQELFFFHDLSPGSCFFLPRGAFIYNTLTDFIREEYHKRDFT....................................................................................................... 299
17 -11.700sp|P26639|SYTC_HUMAN Threonyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=TARS PE=1 SV=3  ali   14  5...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................HSSAHIMGEAMERVYGGCLCYGPPI--ENGFYYDMYLEEGVSSNDFSSLEALCKKIIKEKQAFERLEVKKETLLAM-KCRILNEKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTMETLQRIYGI----SFPDPKMLKEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNALIEFIRSEYRKRGFQEVVT................................................................................................... 224
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 9 7   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Jaroszewski L, Li W, Godzik A. A segment alignment approach to protein comparison. Bioinformatics. 2003 Apr 12;19(6):742-9.