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Query: IDP90920 gene: glyQ; glycyl-tRNA synthetase subunit alpha [Vibrio cholerae O1 biovar eltor str. N16961] VC0021 [Vibrio cholerae O1 biovar El Tor str. N16961], from CSGID

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSGNIWVYFSVIFYQFRQKNRANLTMQKYDIKTFQGMILALQDYWAQQGCTIVQPLDMEVGAGTSHPMTCLRALGPEPIATAYVQPSRRPTDGRYGENPNRLQHYYQFQVIIKPSPDNIQELYLGSLRVLGVDPCVHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVTGEITYGIERLAMYIQGVDSVYDLVWTDGPLGKVTYGDIFHQNEVEQSTYNFEHADVDFLFTYFDQCEKECKYLLELEKPLPLPAYERILKAAHAFNLLDARKAISVTERQRYILRIRNLTKSVAEAYYASREALGFPMCKKSEQKLast
1 -49.100sp|P49588|SYAC_HUMAN Alanyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=AARS PE=1 SV=2  ali   11  1...........................MDSTLTASEIRQRFIDFFKRNEHTYVHSSATIPLDDPTLLFAFLNTIDPSHSRAANTQKCIRANDLDDVGTFFEMLGSWSFGDYFK----ELACKMALELLTQEFGIPIERLYVKDNFWEMGDTGPCGPCSEIHYD-LEIWNLVFIQYNREKPLPKKSIDTGMGLERLVSVLQNKMSNYDTDFVPYFEAIQKGTGARPYTGK---------------------------------------VGAEDADGIDMAYRVLAD............................................ 300
2 -41.000sp|Q5JTZ9|SYAM_HUMAN Alanyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=AARS2 PE=1 SV=1  ali   14  31.........................SSEPPAAKASAVRAAFLNFFRDRGHRLVPSASVRPRGDPSLLFVFLGTVDPRSRRVANSQKCVRANDLEDVGRDLS---HHTFFEMLGNWFKEEACNMAWELLTQVYGIPEERLWIQENFWEMGDTGPCGPCTEIHYD-VELWNLVFMQHNREQPLPQRHVDTGMGLERLVAVLQGKHSTYDTDFSPLLNAIQQGC............................................................................................................. 300
3 -39.300sp|P49588|SYAC_HUMAN Alanyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=AARS PE=1 SV=2  ali   13  7.................................................................................................................................QNLGLDDTKIL-KDNFWEMGDTGPCGPCSEIHYD-LEIWNLVFIQYNREKPLPKKSIDTGMGLERLVSVLQNKMSNYDTDFVPYFEAIQKGTGARPYT----------------------------GKVGAEDADGIDMAYRVLADHARTITVALADGGRPDNTGRGYVLRLRRAVRYAHEK-LNASRGFFATLVDVVVQS 206
4 -38.900sp|Q5JTZ9|SYAM_HUMAN Alanyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=AARS2 PE=1 SV=1  ali   12  41.................................................................................................................................LSLGVPASRVL-QENFWEMGDTGPCGPCTEIHYD-VELWNLVFMQHNREQPLPQRHVDTGMGLERLVAVLQGKHSTYDTDFSPLLNAIQQGCRAPPYL----------------------------GRVGVADEGRTDTAYRVVADHIRTLSVCISDGIFPGMSGPPLVLRLRRAVRFSMEI-VVETLGDAYPELQRNSAQ 246
5 -12.400sp|Q5JTZ9|SYAM_HUMAN Alanyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=AARS2 PE=1 SV=1  ali   8  1.........................................................................................................................................................................................................................................................RAPPYLGRVGVADEGRTDTAYRVVADHIRTLSVCISDGIFPGMSGPPLVLRLRRAVRFSMEI-VVETLGDAYPELQRNSAQ 96
6 -9.390sp|P49588|SYAC_HUMAN Alanyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=AARS PE=1 SV=2  ali   20  1...................................................................................................................................................................................................................................................................................HARTITVALADGGRPDNTGRGYVLRLRRAVRYAHEK-VVQSLGDAFPELKKDPDM 70
7 -7.710sp|Q9NYC9|DYH9_HUMAN Dynein heavy chain 9, axonemal OS=Homo sapiens GN=DNAH9 PE=1 SV=3  ali   9  32.....WSKLVPQFEFDPEMPLQACLVHTSETIRVCYFMERLMA--------------------RQRPVMLVGTAG--TGKSVLVGAKLASLDPE------------AYLVKNVPFNYYTTSAMLQAVLEKPLEKKAGRNY----------GPPGNKKLIYFIDDMNMPEVDAYGTVQPHTIIRQHLDYGHWYDRSKLSLK---EITNVQYVSCMNPTAGSFTINPRLQRHFSVFVLSFPGADALSSIYSIILTQHLKLGNFPASLQKSIPPLIDLALAFHQKIATT-FLPTGIKFHYIFNLRDFANIFQGILFSSVECV........... 297
8 -7.140sp|Q96DT5|DYH11_HUMAN Dynein heavy chain 11, axonemal OS=Homo sapiens GN=DNAH11 PE=1 SV=3  ali   12  7............................................................................................................................................ILEKPLEKKAGHNYGPGGNYFIDDMNMPEVDLYGTVQPHTLIRQHIDYGHWYDRQKVMLK---EIHNCQYVACMNPMVGSFTISPRLQRHFTVFAFNFPSLDALNTIYGQIFSFHFQQQAFAPSILRSGPTLIQATIAFHQTMMCN-FLPTAIKFHYIFNLRDLSNVFQGILFASPECL........... 185
9 -6.820sp|Q8IYD8|FANCM_HUMAN Fanconi anemia group M protein OS=Homo sapiens GN=FANCM PE=1 SV=2  ali   6  1....................................................IEACYQVMGIPQSHMAEMTGSTQASSKRVLFLTPQVMVNDLSRIDEAHKALGNYAYCQVVRELVKYTNHFRILALSAT--GSDIKAVQQVIT--------------NLLIGQIELRSPDILTYSHERKVEKLIVPLGEELAAIQKTYIQI-------LESFARSLIQRNVLMRRDIPNLTKYQI-------ILARDQFRKNPSPNIVGIQQGIIEGEFAICISLYHGYELLQQMGMRSLYF---FLCGIMDGTKGMTRSKNELGRNEDFMKLYNHLEC 268
10 -6.670sp|Q9UFH2|DYH17_HUMAN Dynein heavy chain 17, axonemal OS=Homo sapiens GN=DNAH17 PE=2 SV=2  ali   8  82............................................................................................................................................VLEKPLEKKSGRNYGP---YFIDDMNMPEVDKYGTVAPHTLIRQHMDHRHWYDRHKLTLK---DIHNCQYVACMNPTSGSFTIDSRLQRHFCVFAVSFPGQEALTTIYNTILTQHLAFRSVSMAIQRISSQLVAAALALHQKITAT-FLPTAIKFHYVFNLRDLSNIFQGLLFSTAEVL........... 260
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Jaroszewski L, Li W, Godzik A. A segment alignment approach to protein comparison. Bioinformatics. 2003 Apr 12;19(6):742-9.