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Query: CPX_91702_91677 Complex of EZRI_HUMAN with M1_I34A1 [Undefined organism], from CSGID

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MPKPINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTIGLREVWYFGLHYVDNKGFPTWLKLDKKVSAQEVRKENPLQFKFRAKFYPEDVAEELIQDITQKLFFLQVKEGILSDEIYCPPETAVLLGSYAVQAKFGDYNKEVHKSGYLSSERLIPQRVMDQHKLTRDQWEDRIQVWHAEHRGMLKDNAMLEYLKIAQDLEMYGINYFEIKNKKGTDLWLGVDALGLNIYEKDDKLTPKIGFPWSEIRNISFNDKKFVIKPIDKKAPDFVFYAPRLRINKRILQLCMGNHELYMRRRKPDTIEVQQMKAQAREEKHQKQLERQQLETEKKRRETVEREKEQMMREKEELMLRLQDYEEKTKKAERELSEQIQRALQLEEERKRAQEEAERLEADRMAALRAKEELERQAVDQIKSQEQLAAELAEYTAKIALLEEARRRKEDEVEEWQHRAKEAQDDLVKTKEELHLVMTAPPPPPPPVYEPVSYHVQESLQDEGAEPTGYSAELSSEGIRDDRNEEKRITEAEKNERVQRQLLTLSSELSQARDENKRTHNDIIHNENMRQGRDKYKTLRQIRQGNTKQRIDEFEALXMSLLTEVETYVLSIIPSGPLKAEIAQRLEDVFAGKNTDLEVLMEWLKTRPILSPLTKGILGFVFTLTVPSERGLQRRRFVQNALNGNGDPNNMDKAVKLYRKLKREITFHGAKEISLSYSAGALASCMGLIYNRMGAVTTEVAFGLVCATCEQIADSQHRSHRQMVTTTNPLIRHENRMVLASTTAKAMEQMAGSSEQAAEAMEVASQARQMVQAMRTIGTHPSSSAGLKNDLLENLQAYQKRMGVQMQRFKLast
1 -6.860HGC00921 gi|162841401|dbj|BABA01003308.1|3.0 TMP01242;  ali follow..  11  6LPNTDQARIRALKTAVVKGDMCDVYDLPVSLKTLGEARIFLSKFETAHSYYVHCYGEQSRNSKKHQANVKTARLYISHFIQVALYGLPVDNFSVPDLSSEASLAEWGQKIIEGERKRTSQGGIPIYNPTIAKVKVHYDIFMEGYEKQKSLQSLTNRSLEQLASMRVQADRLILDIWNQVEAKFQDVSPNE--KRLEKCRDYGLIIIIGPEKNRIRRFFKIC---LSIHIP---------FFWKSLQKITFR............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 258
2 -3.430HGC00711 gi|162743779|dbj|BAAZ01020484.1|1.0 TMP00907;  ali follow..  13  33.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTVLVVGVIAVLLAAALGVSGLIQAQAAAGRSRAA------ADLAALGG--ATALSSIVAPGDPCEAASRVARANGAEVTTCSVTGEDVVVEVSVEARV-RPAVS-SARAG....... 137
3 -3.100HGC00690 gi|162868815|dbj|BABB01001192.1|3.0 TMP00870;  ali follow..  11  5...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ILREIFLSVIAFLAGAGVSAGVFAFVLVIGVVPRILRCSRIENIILIENVMICGVVAGNISDTAYNLGFANMPKVPVSNICGNIIIAIYGLGIFVGCIAVALAEILHTFPIIYKRMKLR..... 128
4 -2.830HGC00485 gi|163636056|dbj|BABG01000217.1|3.0 TMP00523;  ali follow..  20  19.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AVNAQRSQLLTVMADAVSECRTAADQAAELNETGQVG-RLAEVWSAIRAKEGTEAKILSDVVAQFYAY............ 95
5 -2.660PB047496 gi|150008556|ref|YP_001303299.1| hypothetical protein BDI_1942 [Parabacteroides distasonis ATCC 8503]gi|149936980|gb|ABR43677.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503]  ali follow..  11  40....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TSVTGGKAVTFENLQGTWMYVNPALQLEGDNALKNVAGSLAATEAEKKMKESALKRGSLKGTYS--VSPEDKTVTLRYTVGNTVSTLTAHVVLSGNELTLLFNADKLLKFLSTVSS--SSNTTLKNKLASEYDGMM--LGFD..... 204
6 -2.650PB000790 _Gut.Meta.Jp.0111831_ gi|163310496|dbj|BABD01000203.1||3 (- 2591:4589~0 complete)  ali follow..  11  232..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................WESYFLLAEAAEYGWISNITPKE--------LGIRSSFEYFGVSEYADQYINSTTRNRLGTSVAFDDTVEPTSEVMTVYNYPTASKTLYGKAMNDHLT--KIITQK-QVLEIHRRLGRYPTTLDNA-DP--ENYQKAVELLG....... 426
7 -2.620PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;  ali follow..  13  363...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................QASDLLTEGKALSH----------SNYIKQHIEGKTTIIFVRD-KQDLEKSLYTLEY--KNGQIYQLR-----------GKHNDVQMAANKWAKLLKSKTKVLQ 451
8 -2.490PB032818 Q5LA03_BACFN/1-211 PB032818; Pfam-B_32818;  ali follow..  20  61......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................VATQGGKLGLAEKSAKMLMQDYGISESFFK--EIDTSIKKNCRTQNDVQAYLFMYQGFSSDLM-NLMQWKFRMPAIFKK.. 142
9 -2.370PB002794 gi|86143885|ref|ZP_01062253.1| hypothetical protein MED217_03525 [Flavobacterium sp. MED217]gi|85829592|gb|EAQ48055.1| hypothetical protein MED217_03525 [Leeuwenhoekiella blandensis MED217]  ali follow..  13  234................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................IESNPKIKVSTPDSNFKKPNLEDRFQPSDSLMTETLARVVEQ--KNFSKAKQAYRILS--------LK----YPEKSG----DQIRAIEKLQEN......... 313
10 -2.300PB000119 Q6KIT1_MYCMO/1-381 PB000119; Pfam-B_119;  ali follow..  17  188..............................EIKFKKINFFSSIFFALTITFAYNS-TFLNLAQIVRINTIRPNPN-IFNFDLNNLPIENGLLTVEAI----WFLQSKMELTD------TATVIIINNTAVNINKNSVKHNNFAVNYLKS-------------------------------------EENNWYLTGRDFPLLGLFVEKF--KDDVEVFSPKIPALYFVVNNSTK----NIFSSVGISSLSTNNPKLIF--------TFTF.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 376

FFAS is supported by the NIH grant R01-GM087218-01
1 3 7 8 0 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Sasin JM, Godzik A, Bujnicki JM. SURF'S UP! - protein classification by surface comparisons. J Biosci. 2007 Jan;32(1):97-100.