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Query: IDP00328 gene: murI; glutamate racemase Cj1652c [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819], from CSGID

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEALDFFEQFQIDMLIIACNTASAYALDALRAKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATIKSEEYQKRLLSQGYTNINALATGLFVPMVEEGIFEGDFLQSAMEYYFKNITTPDALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLKERENIDLKNHKAKLHFYASSDVESLKNTAKIWLNLLRKLast
1 -3.950PB031792 gi|154174791|ref|YP_001409041.1| flavodoxin family protein [Campylobacter curvus 525.92]gi|112804021|gb|EAU01365.1| flavodoxin family protein [Campylobacter curvus 525.92]  ali follow..  19  6..........................................................................................GGPEAHFKRYIK-EHVKGKKTGLFITLGADPAGEHGESMLKVGRELLNEGGNEILAEFICQGAIDPKVIEEMKE...................................................................................... 78
2 -3.770PB001572 gi|163816107|ref|ZP_02207475.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]gi|158448527|gb|EDP25522.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]  ali follow..  8  114............IKLAPVNAPYFDGAKLLIAADCTAYAYASFHEKFIKDYSEKLTEIIRRNDIQSVTIV--------------RMEVPCCGGLEMAAKKALQDSGKF--QVATISIDGRI.................................................................................................................................. 222
3 -3.610PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991;  ali follow..  16  34LRIAVVDGQGGGIHITARLRQELPPEVEI-------LALGTNAAATVAMIKAGANE---ATGERAIIYNAPRVEAI-TGSLAIILADAMLGELTPAMAAAIAASPARKFLLPI......................................................................................................................................... 138
4 -2.650PB155142 _HOMD.0127537_ bfor_c_1_1790 Tannerella forsythia ATCC 43037 [677748 - 680894] ORF  ali follow..  11  2......................................................................TQTSASVLNLINPE-DIESQTILKDAAATALYGSRGANGVVLI----TTKSGRRGKTHIAFTAEYGTSDFATPHALDYMDAGQYAQYTWESLKNKYL................................................................................... 93
5 -2.640PB003142 Q8DVS6_STRMU/1-162 PB003142; Pfam-B_3142;  ali follow..  13  9..........PGRPLSNFLLEGTIMKLTVYFDGVFRYPFGKEPKDS------DIWNFIAKKLPSLIKKYDHIKTSSHADSIPQPKK------MNPKRMQRVLNKSKKQSAVSTKAQAEMQKLHEALKKEKK....................................................................................................................... 134
6 -2.580PB000119 Q6KIT1_MYCMO/1-381 PB000119; Pfam-B_119;  ali follow..  11  160............IVVAPNLVKILNKNLPNLWGEKFTFTFKEIKFKKINFFSSIFLSFIS---ALTITFAYNSTFLNLAQIVR-------INTIRPNPNP--EIFNFDLNNLPIENGLLTVEAIWFQSKMELTDTATVIIINNTAYVNINKNSVKHNNFAVNYLKS------EENNWYLTGRDFPLLGLFVEKFFKDDVEVFSPKIPALYFVVNNSTKNIFSSVGISSLSTNNPKLIFT............ 373
7 -2.170PB009534 gi|153852721|ref|ZP_01994158.1| hypothetical protein DORLON_00140 [Dorea longicatena DSM 13814]gi|149754363|gb|EDM64294.1| hypothetical protein DORLON_00140 [Dorea longicatena DSM 13814]  ali follow..  15  59.........MSVLKVIQKIHEIYPEASVENIGET----------DFIVTYEEQDGKGGVIHVAKIVMVVMISFFGAAFSTMAFNNDVGVTKMFGQIYELLTGTKSNG--CIGIIIGILTFFNHFGKKRLSVDPT--------------VEMRLYENDIQTTLVETYSRKEKELDV........................................................................... 209
8 -2.070PB019388 gi|83589066|ref|YP_429075.1| Radical SAM [Moorella thermoacetica ATCC 39073]gi|83571980|gb|ABC18532.1| Radical SAM [Moorella thermoacetica ATCC 39073]  ali follow..  7  14.PYQVLASSAITYEEMLRLHAIEGLLKYYGADHAFAYLAATAFDGSYFAIYEALAAWWEARGLLRRGHSQRDLFNHLASFAIHLARGIATRVTVPPLPGYHDSILEINEHSGCARNLTPAQLDRFYQLLKFDCLCRDRSRNFPGWMPPSPLTEEERSNWPRSMEKYMPGLVKESP-LRRHGFIELFPCHPERPEEDNPTIV................................................. 234
9 -1.970PB001823 Q5L7Q9_BACFN/1-326 PB001823; Pfam-B_1823;  ali follow..  11  107...........................AIMFEDTQNGDYD---NDLIIHVKNTASNTETWQTIEIQPIALGSTKTIKLG-----CILSDGSTHMISDDVRTDLFGGRQGFINTVNDNDPIRYKLASTNIKNYAMPKKEKTSAAWVAWFIEVDGKRMYAASSDIDYKSYDMVNKENMPYGLASYPQEKNSLFETYPGFSDWINGKVS............................................ 292
10 -1.950HGC00991 gi|163600283|dbj|BABF01000984.1|3.0 TMP01348;  ali follow..  8  1..............................................................................................................MQVDTKLINLKLWGYITMKKMIAYCGLDCEKCDAYIATINDNQELRKKTAKLWAELNNAPILPEHINCGCR..................................................................... 72
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 8 3 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Grynberg M, Erlandsen H, Godzik A. HEPN: a common domain in bacterial drug resistance and human neurodegenerative proteins. Trends Biochem Sci. 2003 May;28(5):224-6. Review.