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Query: IDP05557 gene: glyQ; glycyl-tRNA synthetase subunit alpha [Listeria monocytogenes EGD-e] lmo1459 [Listeria monocytogenes EGD-e], from CSGID

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSPYTFLKAIGPEPWKAGYVEPSRRPADGRYGENPNRLFQHHQFQVVMKPSPDNIQELYLGSLEKLGINPLEHDIRFVEDNWENPSLGCAGLGWEVWLDGMEITQFTYFQQVGGLECFPVTSEITYGVERLASYIQDKENVFDLEWTEGISYRDIFFQAEFENSTYAFETSNTDMLLTLFDTYEREATRQMQDGLVFPAYDYVLKCSHTFNLLDARGVVSVTERAQYIGRIRNLARRIAKTFYESREKLGFPLLKEEGGKRHELast
1 -4.150PB005346 A0R807_PELPD/1-258 PB005346; Pfam-B_5346;  ali follow..  10  2.............................................................................................TDSLFWAIDIKNQFHHNWMGMSQINQTTSGNFYSHRNITDVLENFTDALDCLTAHLMLECSEVLAGVKPANLISIVNRTRPCGRNLYLLWQQHHTDLAQRLNNLVRLEHHLSHPGIRTLLHKAGYKDDADCEGMLLELRSRIGGNNSFPHEIGLFIGYPA.......... 181
2 -4.030PB044863 Q5LB69_BACFN/1-105 PB044863; Pfam-B_44863;  ali follow..  11  11................................................................TRSMEISEENLVTIEKY--QHLIDSNGIVDEAVLEKLKL-SLIASQEEDSKDLLDLCIDVAFGLQQLIKLYLTWLSKQEAE...................................................................................................................... 101
3 -3.990HGC01215 gi|162843249|dbj|BABA01001460.1|3.0 TMP01713;  ali follow..  10  9..........................................................................................GFSVDVFIVHIREI-LFFCHFSVSDTFANKAASGGNVVSENTIAVHEQTDAY-----IAMPQLPYLPDAELAGMGGQLHSLTYSRIQRISTTEYIFSLKDWIDKLAQRAAVLSLHREKLYDATAYYRCQPVCE---YIFTLRRIL............................ 149
4 -2.920PB038401 Q8RFH0_FUSNN/1-210 PB038401; Pfam-B_38401;  ali follow..  7  1....MDIGPCSIPTGEFLVGDPLVYLGSKYEK----------EYFQKIPTGEFRTEICVVKASDGDCDRYAAVRLKFNDNYFEEA-----------------------MKGIEDLKDINEGDFFGFNVD------AGLACICDKKLHDLYCEFDEKFVKENPDGNAYDDADLFKKSYEDNPKYQRDGGDWINWTIPGTDYHLPIFQS-------GDGAYPV-DKDGNVCQL................................ 191
5 -2.480PB202086 Q8G498_BIFLO/2-200 PB202086; Pfam-B_202086;  ali follow..  7  82.....................................................................................................EYNALLNGDAADAAAVKAEQVKDSKTVESLGKELKASAPEYEG--------------VAENAQGLDAAAVKLNEQADWYETHEKSLSKAVRAVVESKAAKRLDDAKTNLTAKLASKLLADSDGK...................................... 194
6 -2.450PB002534 Q8H9W1_9CAUD/1-397 PB002534; Pfam-B_2534;  ali follow..  9  8...........................................IGHRKRDLPELQAHEELPAIASFGFEVELEGSDEWPDGWNRKEDGSLRSGMEYVFDG-RVDRFAATMEAVKPAPTFRCLHMDMRLIKTVLTY----MVFEDVFFDHCEPYRRDSNFCIPFFSNDWLAQAFGRRLLAVNEDGLRVRGLMNWPKYSALNLQTVTTFGSIEFRGSHAMTSRDEMVGLMQRMLCLKAFAKGHEGVDTSEFLEVLTNVDLRDVFH 242
7 -2.100PB037276 Q24TM0_DESHY/1-190 PB037276; Pfam-B_37276;  ali follow..  12  41................................................................................................IAPGIQMSQLTMDSTFQSIAPVKKFLQIDYCIECYEVEYQNGTVSFLGEGDLCVTDLSRQVFVSSRLPLRKYRGVTLHTLSAGFPQAEINLAGIVNELCGKEQSLLVKSREDVERIFGKLSEVDERIQAPYY-WIKTM............................. 188
8 -2.080PB022697 Q5LAY4_BACFN/1-165 PB022697; Pfam-B_22697;  ali follow..  14  60.....................................................................................................EVMFGGFCQLIQNGYGGYIFDNP-WGAEDFSKLVYKAKKIYDAH------------RHDLEKERTEDEFMAMYEQYEAFDDLEEEYLDIEEEVTALVA-SYVDDHLELFAKIV................................................. 165
9 -1.990PB000790 _Gut.Meta.Jp.0111831_ gi|163310496|dbj|BABD01000203.1||3 (- 2591:4589~0 complete)  ali follow..  10  227...............................................................................................IYFAPWES----FLLAEAAEY----------G-----WISNIPKEAYELGIRSSFEYFGVSEYADQYINSTTRNRLGTSVAFDDTVEPTSEVMTYRDGYTNTDQIQEVVY-----NYPTASKTLYGKAMNDHLTKI------ITQKYIADHRRLGLPFFEIPANE... 374
10 -1.970PB064361 Q64PJ4_BACFR/1-580 PB064361; Pfam-B_64361;  ali follow..  7  39.YPLTFTAMQGE-----VVATPQTRVSDYDDTDGKHK----SKWDGGEV----------------IGVKIGTDGAVGSYTLDSDGKPTTSTSNIPAYWQSTASQTVGWYPNTADISLTGQD-NTGNKFPYVLKGVSSKQYSYKENVQLNLEHQLVKFRVKLNGDVPNLSDAKVFFYGYPTCKNEYGTVIPQGDKTYLAT----RKVGDYYTAM----LAPDTKTSNNFVKIEV.............................. 237
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.