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Query: IDP05689 putative cellsurface protein [Listeria monocytogenes EGD-e] lmo1654 [Listeria monocytogenes EGD-e], from CSGID

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKKILSLLVAFVCLWSILLPGQEADAAAKINSWDLVDSSKHLDYSGNSKYMSFIQSGANTWNAYKKGVIRPASGANKSDVYCSDISANNNINATTYSNGKITFNKKNMDKKNNAGKQNVATHELGHGLRLGHNASSDVMYQYSTSKTTLSTNDKQSYDAAYKKYLast
1 -6.690PB042013 A7V626_BACUN/1-162 PB042013; Pfam-B_42013;  ali follow..  8  1MKRNYFFTMLAAVLLAVAGA------------------------NAQESAEFRPAELAGIWQLCHYVSEIPDVPSDDGRIVNFTMIPGKDAIITGYGTYQQLTDNSYKESIEKNIHLPMLDHK--NILEFEIGDDGVMYLKYFIAKDLNGNELNTWFHETWKR. 150
2 -6.280PB005346 A0R807_PELPD/1-258 PB005346; Pfam-B_5346;  ali follow..  16  171.........................................................................................................................HEIGLFIGYPAKDVAAFMGLVRLPFTCQRLGNPARSLALAEQY 217
3 -6.130HGC00683 gi|163310582|dbj|BABD01000118.1|4.0 TMP00861;  ali follow..  10  1MKTLKITFVMLMTALFLVLPSCSKDDVN---------VTLTPSEEVVNAFQQKYPDVKNKWELVGAYEAEFIYSGTYSENGQHIVLDKVEAQAYITQGGKWVRSEFDVTKDYQDSSSLVVPRAVRETIAAKGKKVDDVKLFDWSDRNDYFYVEFDE........ 149
4 -5.920PB064361 Q64PJ4_BACFR/1-580 PB064361; Pfam-B_64361;  ali follow..  12  1MKIERLFIYCLLAGTSLLASCNSEDMTDNPVE-TLSEGMYPLTFTAMSDYDDTDGKHKSKWDGGEVIGVKIGTDGAVGSYTLDSDGKPTTSTSNIQSTASQTVYGWYPNTADQDNTGNKFPYVL--QLNLEHQ--VKFRVKLNGDVPNLSDAKVF......... 186
5 -5.370PB009233 Q7MX23_PORGI/1-175 PB009233; Pfam-B_9233;  ali follow..  5  9VRGAISFFLVALGICLAVSCT-----------------------YRKDERILYRQVPHGRWQKRDVLDYEILIPDYTRSYSLELLIRHDNRYE--YRDLALAYEVSVGERLIFADSVDLLADKPQQWNG................................... 113
6 -4.960HGC00947 gi|162844524|dbj|BABA01000185.1|4.0 TMP01280;  ali follow..  7  1MRKLVKLILLCLIAYPIISIVSSCSEEEDCSMNARPMMQCYL-YKIDGETERVVNDTLDS-FGTDSIILNNQKRVHGLSLPLRYTADSTVLVFHYSKDVKIKKDT----VIRQKNTPYFLSMDCGYQM-TGRSYSRHLLDSIYIQTAEVSIYGTENLKLFYRN. 166
7 -4.590PB009671 Q5LCM2_BACFN/1-111 PB009671; Pfam-B_9671;  ali follow..  14  1MKKVLVALTMVMGMGSAVAQEPVKLPAMEQNQQTSQDKFTKITVKEPQVVKSTLSKDYEGTI-VKEAFVAEKENGKVYKIIVTAIKED-----------------------QSTEEITVLLNEKGEPV.................................... 107
8 -4.380PB045813 Q5LF03_BACFN/1-275 PB045813; Pfam-B_45813;  ali follow..  8  152.........................................IRLSEIYQVNEAYEWVTDTVKTQLKKDFQGLEEDLQKIQDVIDSGVLSPKKKEPWLAFGIAICTILANEVEGME--MTLVDGNREVPVLRYEGSEQLIDPMKLLWSRVRAGETCEVAEAYKQ. 272
9 -4.320PB047496 gi|150008556|ref|YP_001303299.1| hypothetical protein BDI_1942 [Parabacteroides distasonis ATCC 8503]gi|149936980|gb|ABR43677.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503]  ali follow..  12  1MKKLLCMWMVVCGLLLIPGNMKGQSLKDILNSSAVKNAVTSVTGGKAVTFENL----QGTWM-EGDNALKNVAGSLAATEAEKKMKEYCAKVGIVEGVFNYVFNSDSTFTSALKRGSLKGTYSVGNELTL---NADKLLKFLSTVSSISSNTTLKAINKLASEY 196
10 -4.070HGC01056 gi|162659434|dbj|BAAX01000171.1|2.0 TMP01455;  ali follow..  16  1MKKLLLAMIAVAALISFAA-------------------------DHNETYADQRDDSINAFLRNENIKVINEAEFEKRFEARKAGDKAVKLTDTDPNNNEYVINDGCGDYIAKGKTQNVLCRFTEYCL.................................... 118
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.