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Query: IDP06515 protein of hypothetical function DUF552 [Enterococcus faecium DO] AFK58423 [Enterococcus faecium DO], from CSGID

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MPLLNRGAIANFFGLADEEEYEYQDYPETTKKAVQPTKKNTTQNQSTHSVSAANTHEKQKTATSRPVTHESIQPAEKKKVIELHQSPTKTVAKERTASRTSTQPKANLAGKITVMEPRAYSEAMAIAKRIIAGEATLVNFHLVEEKQARRIVDFLTGTVYALDGDIKRVGDEIFLCTPTGMEIDSSTAQSFADANLFDLLast
1 -4.320PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991;  ali follow..  12  29........................................................................................................KGVFLLRIAVVDGQGGGIGKHITARLRQELPPEVEILALGTNAAATVAMIKAGANEGATGEIYNAPRVEAITGSLAIILADAMLGELTPA..... 121
2 -3.720PB022815 A4DEQ0_LISMO/1-452 PB022815; Pfam-B_22815;  ali follow..  12  317........................................................................VIAHDNAVKLLYQMKHEVEEQQYKVRFEKIKDLEKTIDNYAFIVPKQASDLSNYIKQHIEGKTTIIFVRDKQDLEKSLYLEYKNGQIYQLRGKHNCPTKDVQMAANKWAKLLKSKTKVLQN...... 452
3 -3.150PB064361 Q64PJ4_BACFR/1-580 PB064361; Pfam-B_64361;  ali follow..  8  18...........LASCNSEDMTDNPVETLSEGMYPLTFTAMQGEVVATPQTRVSDYDDTDGKHKSKWDGGEVIGVKIGTDGAVGSYTLDSDGKPTTSTSNIPAYWQSTASQTVYGWYPNT-NTGNKFPYVLKGVSSFRVKLNGDVPNLSDAKVFFYGYPTCKNYGTVIPQGDKT-MLAPDTKT................. 228
4 -3.110PB155142 _HOMD.0127537_ bfor_c_1_1790 Tannerella forsythia ATCC 43037 [677748 - 680894] ORF  ali follow..  15  9........................................................................................................................................LNLINPEDIESQTILKDAAATALYGSRG-----ANGVVLITTKS................... 47
5 -3.020PB001572 gi|163816107|ref|ZP_02207475.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]gi|158448527|gb|EDP25522.1| hypothetical protein COPEUT_02291 [Coprococcus eutactus ATCC 27759]  ali follow..  11  59........................................................FRRPAAASGEAVQASSYEQAAVECVQNTTDKTVNQQAGDIYNYERPSQLTQWPVQIKLAPVNAFDGAKLLIEKFIKGHVTLIGCPKLDSVDSEKLTEIIR------RNDIQSVT--VRMEVPCCGGLEMAAKKALQDSG.... 206
6 -3.000PB001025 Q1QFV3_NITHX/1-288 PB001025; Pfam-B_1025;  ali follow..  12  15..................................................................................................................MKSDSPDLKTAMLGRIRAEPRKVWTPSDFSRDAVDKTLQRLT------AEALRRIDRGLYDQPGFN................... 80
7 -2.930PB000119 Q6KIT1_MYCMO/1-381 PB000119; Pfam-B_119;  ali follow..  14  267....................................................................................................QSKMELTDTATVIIINNTAYVNINK--NSVKHNNFAVNYLKSEENN-------YLTGRDFPLLG-VEKFKDDVEVFSPK-FVVNNSTKNIFSSVGISSL 363
8 -2.670HGC00166 gi|163579340|dbj|BABE01005762.1|1.0 TMP00473;  ali follow..  8  137.........................................................................................................TTPARTLLDCAVFPFPQALPIYDSLRKSLTTIEEVQSLDEVSVTKLLKYANPLSENGGESLMRGQITELSFGSSCWQCSS.............. 223
9 -2.660PB013946 A7ABR4_9PORP/121-442 PB013946; Pfam-B_13946;  ali follow..  7  141........WCDYLRMLKKLGQDLRNPKNICPEDFMAAHDNATRKIEAIHEKERAAEQRRWEIERREREQQRQLQRKKDAEDFIANKSKFFGLVITDEEIIVKVLESIDE---YYNEGKTQGICVFGSGYYKKADTLILSARIGDEIIETVEVDLRTLEVVQCHGKHNQ............................... 297
10 -2.640PB000821 Q82P27_STRAW/1-209 PB000821; Pfam-B_821;  ali follow..  13  6...........................................................................DKTASPYDTGTPVPGPGGMAVTYEQVATGGLPVAGLERPVVPRLSAGLKLHGEYQGSGFTEPKYIARRGDGQVVQLSRLLHLVASSVDGDIETIAHRV---GRFGREVSADNVRYLIEQKL... 126
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.