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Query: IDP90401 hypothetical protein [Chlamydia trachomatis D/UW-3/CX] CT_579 [Chlamydia trachomatis D/UW-3/CX], from CSGID

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTTGVRGDNAPDPSLLAQLTQNANSASAASTGKNGQVAGAKQENVDASFEDLLQDAQGTGGSKKATANQTSKSGKSEKAQASSGTSTTTSVAQASQTATAQAVHGARDSGFNSDGSATLPSPTGTEVNGVVLRKGMGTLALMGLIMTLLAQASAKSWSSSFQQQNQAIQNQVAMAPEIGNAIRTQANHQAQATELQAQQSLISGITNIVGFAVSVGGGILSASKSLGGLKSAAFTNETASATTSATSSLAKTATSALDDVAGTATAVGAKATSGAASAASSAATKLTQNMAESASKTLSQTASKSAGGLFGQALNTPSWSEKVSRGMNVVKTQGTRAAKFAGRALSSAMNISQMVHGLTAGIDGIVGGVIGAQVAQEQRMAGMAEARAEELKSLNSVQAQYASQAQQLQEQSQQSFNSALQTLQSISDSALQTTASMFNLast
1 -2.810PB038151 Q8A4A5_BACTN/1-178 PB038151; Pfam-B_38151;  ali follow..  12  8.............................................................................................................................................................ATIFASSHPDIAKRTSISGLLISCV-------ASTFELEDKSSTVSMALMVFGTGL-----FLLGIFRLFWKSKEVVYVPTGSIAKERSIFFDLKHMDKLTDLVNSGSFSADSKIKSEASGNIRMDVILSADNKFAAVQLFQ............................................................................................................................................ 146
2 -2.650PB027498 Q7MTK6_PORGI/1-146 PB027498; Pfam-B_27498;  ali follow..  13  24...............................................................RHSHKRRAAEAKGESLPEEPVRVVPPGCCGMHITCEKDSLLTAVSKSIVYYDDEELDRYAGVLPEEYNTEA----VEEFEEILSTLQEEEVPSWIRSLQMRQIQMPISIEQALFIVSEHRIQHRHD.......................................................................................................................................................................................................................................................... 146
3 -2.530PB029229 gi|150007903|ref|YP_001302646.1| hypothetical protein BDI_1263 [Parabacteroides distasonis ATCC 8503]gi|149936327|gb|ABR43024.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503]  ali follow..  9  1...................................................................................................................................MKTGIRVTVYA-LLAMILFSCEHKDWKNAPQADPEGMC--VYFYPEEGESPIRFDFAGKDGGSV----EIKEGRYRILCYNNDTESLLFRGMEGFDTHEGYTRDGNVFESIYGNGAHYAPPAKGSEDERVVICPDMMWGSCARNVEITELGLSYECISFADKDKVEWIESSEHVITLYPAELICTYTYEVRNVKNMEYMTQ----CGSLSSMAPSMLFANEELDRECVTVPFETELHLESSKMTGKFYTFGHHEENARPHK............................................... 267
4 -2.410HGC01215 gi|162843249|dbj|BABA01001460.1|3.0 TMP01713;  ali follow..  12  1.........................................................................................................................................................................................................LVGVFCVEGFSVDV---IVHIREICFPVLFFCHFSVSDTFANKAASGGNVVSENTIAVHEQTDAYIAMPQLPYLPDAELAGMGGQLHSLTYS.................................................................................................................................................. 90
5 -1.720PB045813 Q5LF03_BACFN/1-275 PB045813; Pfam-B_45813;  ali follow..  10  115...............................................................................................................................................................................................................ECSFTVPKGEHVDEAEKIISSLEIRKDGQKYPAE----IIPIRLSEIYQVNEAYEWVTDTVKTQLKKDFQGLEEDLQKIQDVIDSGVLSPKKKEPWLAFGIAICTILAN-EWVDGNREVP-VLRYEGSEQLIDPMKLLWSRVRAGE...................................................................................... 262
6 -1.580HGC01056 gi|162659434|dbj|BAAX01000171.1|2.0 TMP01455;  ali follow..  7  1...................................................................................................................................MKKLLLAMIAVAALISFAACDHNETYADQRDRELDSINAFLR.......................................................................................................................................................................................................................................................................... 42
7 -1.290PB128892 A6TNK2_9CLOT/1-174 PB128892; Pfam-B_128892;  ali follow..  8  47................................................LQQFIGELKESSFIMEQEKDTGQLFMITDQGKKTLTYFISRIPEEKRLKIDHLLNIKKEEFVRNTEIKGEYEKLTDNEYL-VKLSVIEQGTPIFNLKLSVGNVKQAKDMCEKWRSDAQELYGQI........................................................................................................................................................................................................................................................................... 169
8 -1.250HGC00422 gi|163631722|dbj|BABG01004545.1|2.0 TMP00397;  ali follow..  12  90................................................IRDSIENRADDVCRAKEELRTTPIYPHSAAYAREHGELEQYRASNNVNRQCKESIEAAVREHFDGMYL------SHDAAKGVIETYGMERVSMV-LSNTVQLSRRNKEWAKTIPNDNPETVRCLNSHPAVLDGFIDLVREEQQRSRTQREKL............................................................................................................................................................................................................................................... 244
9 -1.130PB030138 Q7MX14_PORGI/1-113 PB030138; Pfam-B_30138;  ali follow..  14  25..............................................................RRDELEKRIERIRREVEQEEQAELDGQSSSHDYSGYRPR-IRGTFVEGTQHLKERQLQGETQST-----SGRTLRTLALLIAVCLL................................................................................................................................................................................................................................................................................................... 105
10 -0.994HGC00711 gi|162743779|dbj|BAAZ01020484.1|1.0 TMP00907;  ali follow..  14  20..................................................................................................................................................................................GAASGALSDERGAGTVLVV--GVIAVLLAAALGVSGLIQAQAAAGRSRAAADLAALGGATALSSIVAPGDPCEAASRVARANGAEVTTCSVTGEDVVVEVSVEARVLGVSRPAVSSARA.............................................................................................................................................. 136
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 1 6   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Sequence clustering strategies improve remote homology recognitions while reducing search times. Protein Eng. 2002 Aug;15(8):643-9.