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Query: IDP90410 hypothetical protein [Chlamydia trachomatis D/UW-3/CX] CT_663 [Chlamydia trachomatis D/UW-3/CX], from CSGID

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130
# Score Template Links and tools%idFirst MLEKLIKNFVAYMGVASELEFDADGSYVFPISSLVRMRVRQNADEEIIISAFLGEIPASMDIEKAYARMMEGNLFGQETGGAALGLDSDGHAVLVRRVPGEVSQEDFASYIESVLNYAEAWLEDLGLSKTEQELast
1 -3.740PB002534 Q8H9W1_9CAUD/1-397 PB002534; Pfam-B_2534;  ali follow..  8  27.....IASFGFEVELEGSDEWPRIDGWNRKEDGSL------RSGMEYVFDGPASGAEAIQRVDRFAATMEAVKPAPTFRCSTHLHMDMRDSSM---------------DVLIKTVLTYMVFEDVFFDHCEPYR 133
2 -3.230PB047496 gi|150008556|ref|YP_001303299.1| hypothetical protein BDI_1942 [Parabacteroides distasonis ATCC 8503]gi|149936980|gb|ABR43677.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503]  ali follow..  10  84.AEKKMKEYCAKVGIVENYVFNSDSTFTSALKRGSL-------KGTYSVSPEDKTVTLRYTVGNKKLTVSTLTAHVVLSGNELTLLFNADKLLKFLSTVSSISSNTTLKAINKLASEYD.............. 197
3 -3.110HGC00857 gi|162620543|dbj|BAAW01002606.1|2.0 TMP01139;  ali follow..  9  3...................................................NFHSKKVMCIQQEIYARMIMYNFVQMITSHVVIVKKQRKHTY-------KANFSVATHMCRLFYREKTTSPNLETIIAK... 74
4 -2.660PB001025 Q1QFV3_NITHX/1-288 PB001025; Pfam-B_1025;  ali follow..  12  10..................LQFSDMKSDSPDLKTAMLGRIRADEPRKVWTPSDFVDLASRDAVDKTLQRLTKAEALRRIDRG.................................................... 72
5 -2.610HGC01024 gi|162869036|dbj|BABB01000971.1|4.0 TMP01399;  ali follow..  6  16..............................................AFMVGCGKQVPENIIQPDRMENIL-YDYHLSISMGNNLSYSDNYQKEAYKNYV-HITEAEFDSSMVWYTRHTEELASLYKKLGERFR 104
6 -2.590HGC00573 gi|163306732|dbj|BABD01003960.1|2.0 TMP00669;  ali follow..  6  1...................................................................................MAQQKNEVQSLLEKAMFQATVADFWMAGLELGVIKTNQRDEASPKEVCSG 50
7 -2.470PB006101 JCVI_PEP_1096697844517 /source_dna_id=JCVI_ORF_1096697844516 /offset=0 /translation_table=11 /length=371 /full_length=371  ali follow..  7  47..GKIGRELVDIYSSYISGLPQPEPRYDLRYIKPRKFNSILKHAKNIVV---AFSLEGNSLDSEILRRNFNSESLDKIQSDSSLFYFVRRNQYARGQVVLYLFSENDDDLYSKIKRNRNSILKFFDDELKK.. 172
8 -2.140PB007843 JCVI_PEP_1096682172521 /source_dna_id=JCVI_ORF_1096682172520 /offset=0 /translation_table=11 /length=152 /full_length=152  ali follow..  12  1.LEKIIS-ISGRPGLFEVHTQTRTGVVATSLVDGKRINANARNQVSLLSEINIYGLEKEVPLQEVLTMIHTKE------EGKQCSVKPKSPADELEAYFFDVFQDDEERVYPSDIKKIIQWYNILAE...... 120
9 -2.140PB031792 gi|154174791|ref|YP_001409041.1| flavodoxin family protein [Campylobacter curvus 525.92]gi|112804021|gb|EAU01365.1| flavodoxin family protein [Campylobacter curvus 525.92]  ali follow..  13  10...............................AHFKRYIKEHVKGKKTGLFITLGADPAGEHGESMLKVGREL-------------LNEGGNEILAEFICQGAIDPKVIEEMKEMAAK................ 82
10 -2.020PB060121 Q64SA7_BACFR/1-251 PB060121; Pfam-B_60121;  ali follow..  12  34.LKEIGK--GGYSPVLPMRVTNENGE-VIESRSRFAFIRMDSGEVDVVFYPTLKSSPLECYNEEQQKQLLDGKSIIARRSKAFVQIDEETKQVM------YVPTPIIARNLKVLAEVMHLGTVEVNGMQHGEP 163
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 1 0 5   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;