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Query: IDP91202 gene: aroQ; 3-dehydroquinate dehydratase [Bifidobacterium longum DJO10A] BLD_0610 [Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088], from CSGID

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .
# Score Template Links and tools%idFirst MTKVIVVNGPNLGRLGVRQPDVYGRQDLDTLRKLCAEWGKDLGLEVEVRQTDDEAEMVRWMHQAADEKTPVVMNPAAFTHYSYALADAAHMVIDENLPLMEVHISNPSARDEFRKRSVISPVATGTITGMGFYGYKLALDAVAHLLSELast
1 -3.510HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561;  ali follow..  13  13...LLLICNRELLLIGKRKDEDDMAKSTKTYEERIRALEKKEQESIE..................................................................................................... 56
2 -3.120PB083081 gi|160890648|ref|ZP_02071651.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]gi|156859647|gb|EDO53078.1| hypothetical protein BACUNI_03093 [Bacteroides uniformis ATCC 8492]  ali follow..  9  1MKKTIFYSMFEIDNYEEPSETIWGEVVDEATGKRVLTDQGSEGIRVRLTELSNVQHNPDFYCMMDGTFQNTKIFKGEYNGPFIPLVRENTDGTLLHDGSVNTEISGTTKVK..................................... 130
3 -2.850HGC00933 gi|162753228|dbj|BAAZ01012194.1|2.0 TMP01261;  ali follow..  17  114IEKSLVSKNPLVRILALLDRRL-GKRRLLALEESMEQ----------------ELDWVRAFYVIRMQAEGLMEK.......................................................................... 170
4 -2.470PB044380 A7LRP7_BACOV/1-223 PB044380; Pfam-B_44380;  ali follow..  7  129..................VDAVSRVVTPDDLDNAGNVLFKLNDADKDEEKSLRAALTLHTIRET-DLFEIFSSQVENKNVIDSLMGKYLDGNGNP..................................................... 204
5 -2.410PB007843 JCVI_PEP_1096682172521 /source_dna_id=JCVI_ORF_1096682172520 /offset=0 /translation_table=11 /length=152 /full_length=152  ali follow..  14  1LEKIISISGPGLFEVHTQTRTGVVATSLVDGKRINANARNQVSLEINIYGLEKEVPLQEVLTMIHTKEEG.............................................................................. 73
6 -2.360HGC00248 gi|162576253|dbj|BAAV01029229.1|2.0 TMP00024;  ali follow..  8  36..........NCITILQNDHVLADAIRLNLLSERIDIVKPGWPRSGKTLNDTDMKYILRRMEKYGISSEKKIIRIVGNENPYHPIRDYLNGL........................................................ 121
7 -2.240PB009510 _JGI.0345302_ 2004041369 [Human Gut Community Subject 8]  ali follow..  8  17GKWMFQVMGLEYDKALKLAEELPEQFFPETATWGLCWHEIKWGLPVQENLS---------YQERRQAIYEKRDYHSPMTPYI--MERYLENATGFTVHIAD............................................... 106
8 -2.110PB012771 _Gut.Meta.Jp.0094636_ gi|162817068|dbj|BABA01027641.1||1 (+ 249:636~0 complete)  ali follow..  9  29.........PTCMLGDKSPNGKWASLYERYLQEKHPHEYVRL-----------ADELAALLESVQRECE............................................................................... 79
9 -2.060PB032242 Q8FLW6_COREF/1-257 PB032242; Pfam-B_32242;  ali follow..  8  87.....LTYFPILGSAAMYQAFMIGNISNKLVPAAIVAQS-----SIGAKAGSKRGDLAAVMAIGGAATMHLLSLLIFVGFLGTWLVSLVP.......................................................... 166
10 -1.980PB021133 Q64YN4_BACFR/1-310 PB021133; Pfam-B_21133;  ali follow..  9  63..........NIGQLLKTDAKFY-AIHVSPSEKELQAMGNTEHEQAESMKRYIREVFIPEYAKNFNK---------GLSEADIKFYGKIHFNRSHSDNELNMHCHLIVSRKDQSNKKKLSPLTNPIKGGFDRKSLFQQAKLGFG.... 193
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Harder T, Kolodny R, Sitbon E, Li Z, Godzik A. Using an alignment of fragment strings for comparing protein structures. Bioinformatics. 2007 Jan 15;23(2):e219-24.