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Query: IDP92606 gamma-adaptin, putative [Toxoplasma gondii ME49] TGME49_113670 [Toxoplasma gondii ME49], from CSGID

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSCKLREFIRNIRAAKTAADERAVVSKECAEIRTAFKEGDGRYRHRNVAKVLFISMLGYPTQFAQLECLKLLASPRFAEKRVGYLGLSCLLDEQSEVLMLATNSIKNDLQHPNQYVNGLALTALGNIGTGEMCGAIMTQVEDLLRCSNPFIRKKAALCGVRVVKRVGDCEEKLLACLPALLADRNHGVLISACALITALAERDPSLVSTMRTHIPTLVKSLKACLTAGYAHAAEYDIAGITDPLLQCRLLRVLALLAKGDAESSASLSDVLAHVATNTEGAKNVGNSVLYECVRTIMTIEDDPGLRVLGVNILGRFLSSRELNVKYVALGTLQQVVRVDSKAVMRHRDILLDCLKDQDLSLRRRAVEVLFCLITDDNVRGLVKELLNFLLMLNDAEFKQFVVNKIAVAASRHAPSTRWQIDTLLKLMTLGGDAVDDAITYSFVDLVVSTPPLHSYVVHKCYFSFQHSLSNNAALWQAGVYCVGEFGDLLVKPEKGHLLSPNGGGSMTEDTLAITPRQVADLLISVADQLSSFPKAKQGVLTQTLLTAAAKLAARLPSQRERLVGLLKRFETSNNVEVQQRSSEYMGLLEWDEWKENTSIFDRMPVCDAKLSSRRSLSSLGSGSFASLLSGRSGSAEALSPAPASRPVGDVWFDATEVPLNVGSPLAASSGRDDSEKDERNDRASQVSHGDSLFDEKPAQRNGIAAGSGKKTNDLLDLDDLLNMGYSSESRASPQGIPPHASGAPSSGAGVAGGSAVGASSGDKSIDMLADLLEGTSVSLGGGAAVATPAGNSAADMRGSTSAQGGGSLDSLFGLSPSQLSLPSGTSLSAVQSPTSADPFDSFLASSAKGVNSGATPGIGSGLLGTVGSENGAFPPMNVLNEDDLCVDFICSRQGQSGSTATLLHEASGSEKGASIRAEFRNRGQAQITNLLFEAAVPKYLKLTIQPATGTSVPPTGTGVVTQDMCVCFGDGASAPGAKPLLMKCRISFNKDGAMLQKFVNVGDFPAGLLALast
1 -7.570PB014998 gi|86133284|ref|ZP_01051866.1| hypothetical protein MED152_01230 [Tenacibaculum sp. MED152]gi|85820147|gb|EAQ41294.1| hypothetical protein MED152_01230 [Polaribacter dokdonensis MED152]  ali follow..  10  5..........................................................................................................................................KITEELQNLGNA-GKDNRQRVANIVLENKELFEP----LLEVTFQVDEPISVKAAWVLEWICTHHQLSW--MIPHLTFFTENLKNLTFDS----------------AIRPCAKICEHLANAYYSKRDNE-------------------------FKSKLKNEHIQEIIETGFDWL---ITPQKIAVRAYTMNTLYLFGLENDWVHPELKHLIETKIIHESKGTKARGKHILNLIEKHQK......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 192
2 -2.990PB032818 Q5LA03_BACFN/1-211 PB032818; Pfam-B_32818;  ali follow..  14  21...NVEDFVSLTR-AVNLGITNIRFLPDVANFKRLFKVATQGGKLGLAEKSASRKML-YGISESFFKEIDTSIKKNCRTQNDVQAYLFMYQGFSSDLMMLMGNLMQWKFRMPAIFKKAL-----------SMTEKTVHDVCTKTVWKADDVHKTAA-----------------VRQYKERLGFSEQWMSEYVYNIVL-LAKKEPKH.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 204
3 -2.850PB034679 gi|150005530|ref|YP_001300274.1| hypothetical protein BVU_3014 [Bacteroides vulgatus ATCC 8482]gi|149933954|gb|ABR40652.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]  ali follow..  9  7........................................................................................................................................IHEIINTIFVAKGLLKRKVL--ALALLKEDENRLKILIEK--EIIHQNGNFVELDFLDFFELLLEANEEINTATVEENIEYLHELMDYYLKEKIQSRKESYVR--------NIKITFQKLARVTIRNIINLQHNIDNAFKH-----------------------------------------EPTYQIKIAKLQNIQRLIDSTEHLILHEERDFFRQATDEE--LTRILLELRQELQLAHSLIRAQQDIINYLNQIKNQVILVEKIRKVKYLQDQFELRARSNLSEIME-FKLSPSYLASDEVRPIILKVISNQKYREIVRKNEAGAFSEEDLEAQAMYEEVI-------------------------------------------------------NLDEVVTAFVQSGAEARW--KGEPVSDLFSFLLQYHFHREVDEKERTTFFCQIVSLYESQLE.............................................................................................................................................................................................................................................................................................................................................................................................................................. 388
4 -2.690PB022697 Q5LAY4_BACFN/1-165 PB022697; Pfam-B_22697;  ali follow..  6  6................................DASLQKAAGEGMDEFIQVFT--------------DKYKEVIGGELTAETMPLL-------TGEQHSLLAYQIFRDEVMFGGYIFDNPFAKVMRLWGAEDFSK-LVYKAKKIYDAHRHDLEKERTEDEFMAMYEQYEAFDDLEEEYLDIEEE--------VTALVASYVDDHLELFAKIV............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 165
5 -2.560HGC00374 gi|162831834|dbj|BABA01012875.1|1.0 TMP00304;  ali follow..  19  9..DELLERIRDIRA-----SEKRVYRK----VKEIFALSVDYDSKSQVAQSFFKSV-----NKLEYAATGHTAPELIAKR----------ADASKDNMGLTSKVRRGDVTVAKNYMTHEEISTLNLI------------VNMYLDYAELQAKGHIPMHM-----------ADWESKLGDFLRFNGREVLENFGTVKREVAEKLALE.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 170
6 -2.410PB007733 A3U921_9FLAO/1-209 PB007733; Pfam-B_7733;  ali follow..  14  74ASERLSELNARLASIKSKSERRKYTKIVQKYIEEQFAAE--------LKKLILVKLIHRQTGVTTFQLIKNLRSRAFWYDTTAGLFDIEL-REDFLIEDILQRSFQRNILDNQPSVLNIDYFEASS.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 207
7 -2.380PB001025 Q1QFV3_NITHX/1-288 PB001025; Pfam-B_1025;  ali follow..  10  15MKSDSPDLKTAMLGRIRADEPRKVWTPS-DAVDKTLQR----TKAEALRRILYDQLTQKPNPPDPRSVIDAVGRRDQTRMLVDGMTAANDLGLTDAVIVVHTDARRRAIKLGNATITMRVVQALHWLRDLLVRDGESEQIQRKLAKEDPAVGPPLKADLAAGMTALPTWMLVFLKPLIETDPDDRGQHPDNVHAAADQDRQRH....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 250
8 -2.270PB012991 Q2RHT0_MOOTA/1-175 PB012991; Pfam-B_12991;  ali follow..  10  5.............................EEVRTGWSRWDSFLKGVFLLRIAVVDGQGGGIGKHITARLRQELPPEVEILALG-AATVAMIKAGANEGATGERAIIYNAPRVE-----AITGSLAIILADAMLGELTPAMAAAIAASPARINRSGVEVIGVTPEPLPHLIEALVNRVKFFYQEGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 172
9 -2.140HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561;  ali follow..  13  33MAKSTKTYEERIRALEKKEQESIEATKKLIAQRKELKRKKAEESKKRTHRLC---QIG--------GAVESVLGCPIEEEDLPKL--IGFLKRQETNGKFFSKAMQKELVTDME................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 134
10 -2.060PB000119 Q6KIT1_MYCMO/1-381 PB000119; Pfam-B_119;  ali follow..  11  149LIEGFSNFLFCIVVAPNLVKILNKNLPNLWGEKFTFTFKEIKFKKINFFSSIFL-------SFISIFALTITFAYNSTFLNLAQIVRINTIRPNPN----IFNFDLNNLPIENGLLTVEAIWFLSKMELTDTATVIIINNTAYVNINKNSVKHNAVLFVEKFFKDDVEVFSPKIPALYFVVNNSTKNIFSSV---ISSLSTNNPKLIFTFT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 375
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.