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Query: IDP00002 surface layer protein, (pxo1-54) GBAA_pXO1_0079 [Bacillus anthracis str. `Ames Ancestor`], from CSGID

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKKLIYLEEQTMANKFLKTATALTIMGTSLLGAGAFTVKADNTDSLKFNDVPANHWSTKAIYGLANRKVVAGYGNGQFGFGDNVTRGQVARMIYAYVKPADADASFKNPFSDIKGHMFEKEILALAKEGLVAGYGEGKFGPDDILTREQMAQVLTNAFKFKATKTTSFTDIDKNSWALKAISALEENGVTIGTGDKLYSPYAHVTREQYSQFLFNSINVLEKETKPEVKPETKPETKPETKPETKPETKPDVLDDKLVSNEFTFNKEWYESSKVINNSSSIQAQSLINEVNKKYNTNLKYAEVGGVIRLVDNGMYLPEGSLKAQFYIVPINEGSFKVIFLDNNDATVELAKKWTTLLKSDLNLDEEIQGTVESHKLNTFEKGNYKVRIGNSTADHMMYVQVESKLast
1 -5.260sp|Q6P1X5|TAF2_HUMAN Transcription initiation factor TFIID subunit 2 OS=Homo sapiens GN=TAF2 PE=1 SV=3  ali   13........................................................................................KSLFTRMFCCKSCPNIVKTNNFMSFQSYFLQKTMPVAMA----------LLRDVHNLCPKEVLTFILDLIKYNDNRKNKFSD---NYYRAEMIDALANSVTPAVSVNNEVRTLDNLNPRLILEEITRFLNMEK....................................................................................................................................................................................... 134
2 -4.630sp|Q96PZ7|CSMD1_HUMAN CUB and sushi domain-containing protein 1 OS=Homo sapiens GN=CSMD1 PE=1 SV=2  ali   13  13......................................................................................................................QPATLTVDWFNATSSKVNATFSEASPVEKKEEAHLLLKAFQIKGQADIFVSKFENDNWGLDG-GGFTFQGDIHGKDFGKFK............................................................................................................................................................................................................. 107
3 -4.580sp|Q7Z408|CSMD2_HUMAN CUB and sushi domain-containing protein 2 OS=Homo sapiens GN=CSMD2 PE=1 SV=2  ali   10  18......................................................................................................................QPAMLRVTGFQVANSKVNATMIDHSGVEKKEDFHLLLQVYQITGPVEIFMNKFKDDHWALDGHATFIYQGSVKGQGFGQFG----FQR...................................................................................................................................................................................................... 115
4 -4.470sp|Q6NSW5|FA45B_HUMAN Protein FAM45B OS=Homo sapiens GN=FAM45B PE=2 SV=1  ali   8...........................................................DTQLMLGVGLIEKDTNGEV-PS--TTATLRNLLLRKCCLTDENKLLHPFVFGQYRRTWFYITIIEVPDSSILKKVTAKDFNPEK----AAFTRILCRMYLKHGSPVKMM----------ESYIAVLTKGICQSEENGSF.............................................................................................................................................................................................................. 143
5 -4.410sp|Q9BRQ4|CK070_HUMAN Uncharacterized protein C11orf70 OS=Homo sapiens GN=C11orf70 PE=2 SV=3  ali   13  52.QTFQSYRKDDFVMAFFKDPNVIPNLKLLSDSSGQWIILGTEVKKIEAINVPCTQLSMSFFHRLYDEDIVRDSGHIVKCLDSFCDPFLISDELRRVL---VEDSEKYEIFSQPDRE---EFLFCLFKHLCLGG--EDVISPYLETTKLIYKDLV----SVRKNPQTKKIQITSSVFKVSAYD-----------SAGMCYPSAKNHEQTFSYFIVDPIR.......................................................................................................................................................................................... 251
6 -4.400sp|Q7Z407|CSMD3_HUMAN CUB and sushi domain-containing protein 3 OS=Homo sapiens GN=CSMD3 PE=2 SV=3  ali   12  2......................................................................................................................QPMTLTVTSFNASTGRVNATLSNSNMVYKSQEARLMLRIYLIKVPAHASVKKMKEENWAMDG-ATYVFQGFIQGKDYGQFG............................................................................................................................................................................................................. 95
7 -4.320sp|Q92615|LAR4B_HUMAN La-related protein 4B OS=Homo sapiens GN=LARP4B PE=1 SV=3  ali   1..............................................................................................................................AIAINTFLPKNGFRP-SLYAQQRYATSFYFPPMYSPQQQFPLYSLITPQTWSATVTPFPNTGFINGFTSPAF.............................................................................................................................................................................................................. 82
8 -4.200sp|Q8TCE6|FA45A_HUMAN Protein FAM45A OS=Homo sapiens GN=FAM45A PE=2 SV=1  ali   10.............................................................QLMLGVGLIEKDTNGEV-PS--TTATLRNLLLRKCCLTDENKLLHPFVFGQYRRTWFYITTIEVPDSSILKKVTAKDFNPEK----AAFTRILCRMYLKHGSPVKMM----------ESYIAVLTKGICQSEENGSF.............................................................................................................................................................................................................. 143
9 -4.180sp|Q8N2C7|UNC80_HUMAN Protein unc-80 homolog OS=Homo sapiens GN=UNC80 PE=2 SV=2  ali   15  28.........................................................................................................................IKIVKSLGCAYGCGEGHRGLSGDRLRHQVFRENAQNCKLYKLDKMQFRQTMRDYVNKDSLNNVVD--FLHALLGFCMEP............................................................................................................................................................................................................ 106
10 -4.070sp|Q9H9T3|ELP3_HUMAN Elongator complex protein 3 OS=Homo sapiens GN=ELP3 PE=1 SV=2  ali   2.........................................ERDIEQFTEFFENPAFRPDGLKLYPTLVIRGWKSGRYKS---YSPSDLVELVARILALVPPWTRVYRVQRDIP------------MPLVSSGVEHGNLR-LARMKDLGIQCRDVRTREVGIQEIHHKVRPYQVELVRRDYVANGGWETFLSYED................................................................................................................................................................................................................. 148

FFAS is supported by the NIH grant R01-GM087218-01
1 3 9 5 6 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Comparative analysis of protein domain organization. Genome Res. 2004 Mar;14(3):343-53.