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Query: IDP00328 gene: murI; glutamate racemase Cj1652c [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819], from CSGID

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKIGVFDSGVGGLSVLKSLYEARLFDEIIYYGDTARVPYGVKDKDTIIKFCLEALDFFEQFQIDMLIIACNTASAYALDALRAKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATIKSEEYQKRLLSQGYTNINALATGLFVPMVEEGIFEGDFLQSAMEYYFKNITTPDALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLKERENIDLKNHKAKLHFYASSDVESLKNTAKIWLNLLRKLast
1 -5.260sp|Q8IYV9|IZUM1_HUMAN Izumo sperm-egg fusion protein 1 OS=Homo sapiens GN=IZUMO1 PE=1 SV=2  ali   13  2...................................................................VICDPSVVLALKSLEKDYHKAMMERVENAVKDFQELSLNEDAYMGVVDEATLQKSWSLLKDLKRITDSDVKG------DLFVKELFWMLHLQKETFATYVARFQKMLQTLIWCKN.................................................................... 130
2 -4.870sp|O00507|USP9Y_HUMAN Probable ubiquitin carboxyl-terminal hydrolase FAF-Y OS=Homo sapiens GN=USP9Y PE=1 SV=2  ali   11  4...........................................................................................VCCEALEVMTLCFALLPTALDALSKEKAWQT--IIDLLLHCPSKTVRQLAQEQFFLMCTRCCMGHRPLLFFITLLFTILGSAREKGKYSGDY-LLRHLLNYAYNGNINIPNAEVLLVSEIDWLKRIRDNVKNTGETGVEEPILEGHLGVTKELLAFQTS 163
3 -4.800sp|Q6ZN90|PRAML_HUMAN Leucine-rich repeat-containing protein PRAME-like OS=Homo sapiens GN=PRAMEL PE=2 SV=2  ali   21  2.........TMGLMELKQVLYPIPVD----CIYLHGVCRGPVNEDKLCQLQAEIQKQLQAMQQADMQWSPSTVFAYAAGAV......................................................................................................................................................................... 70
4 -4.780sp|P46100|ATRX_HUMAN Transcriptional regulator ATRX OS=Homo sapiens GN=ATRX PE=1 SV=5  ali   15  1.....................................PYIPFNLGALSAMSNQQLEDLINQGREKVVEATNSVTAVRIQPLED....................................................................................................................................................................... 46
5 -4.520sp|Q93008|USP9X_HUMAN Probable ubiquitin carboxyl-terminal hydrolase FAF-X OS=Homo sapiens GN=USP9X PE=1 SV=3  ali   10  3...........................................................................................VCCEALEVMTLCFALIPTALDALSKEKAWQT--IIDLLLHCHSKTVRQVAQEQFFLMCTRCCMGHRPLLFFITLLFTVLGSARERAKHSGDY-LLRHLLNYAYNSNINVPNAEVLLNNEIDWLKRIRDDVKRTGETGIEETILEGHLGVTKELLAFQTS 162
6 -4.450sp|P98173|FAM3A_HUMAN Protein FAM3A OS=Homo sapiens GN=FAM3A PE=1 SV=2  ali   7  62.....FDMWAGDVNDLLKFIRPLHEGTLVFVADDPATKMNEETRKLFSELGSRNAKELAFRDSWVFVGAKGVQNKSPFEQHVKN...................................................................................................................................................................... 142
7 -4.410sp|Q0VG06|FP100_HUMAN Fanconi anemia-associated protein of 100 kDa OS=Homo sapiens GN=FAAP100 PE=1 SV=3  ali   16  13.....FCCPLGGLAAGKPRVLCHEAEVFLSTGSELVYVYDQEGGTAAFRFPDQVWHLELLAPRRLLYALCARRGLYCLS........................................................................................................................................................................... 88
8 -4.320sp|O75592|MYCB2_HUMAN Probable E3 ubiquitin-protein ligase MYCBP2 OS=Homo sapiens GN=MYCBP2 PE=1 SV=3  ali   13  1.................................................................AIILCNVCGNLCTDCDRKEEEEAIKVDLHEGCGRTKLFWLMALADSKTMKAMVEFREHTGKPTTSSSEACRFCGSRSGTELSAVGSVCSDADCQEYAKIACSK--------THPCGH.................................................................... 125
9 -4.160sp|Q2KHR3|QSER1_HUMAN Glutamine and serine-rich protein 1 OS=Homo sapiens GN=QSER1 PE=1 SV=3  ali   12  37.............ALLQKFVPEIRDGQREFAATNS---YLGYFGDAKSKYKRIYVKFIENANKKEYVRVC.................................................................................................................................................................................... 90
10 -4.100sp|Q92520|FAM3C_HUMAN Protein FAM3C OS=Homo sapiens GN=FAM3C PE=1 SV=1  ali   10  62.....FDMWGGDVAPFIEFLKAIQDGTIVLMGDDGATKLNDEARRLIADLGSTSITNLGFRDNWVFCGGKGIKTKSPFEQHIKN...................................................................................................................................................................... 142
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 8 3 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Grynberg M, Erlandsen H, Godzik A. HEPN: a common domain in bacterial drug resistance and human neurodegenerative proteins. Trends Biochem Sci. 2003 May;28(5):224-6. Review.