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current user: public |
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| Query: IDP02151 hypothetical protein GBAA3159 [Bacillus anthracis str. `Ames Ancestor`] GBAA3159 [Bacillus anthracis str. `Ames Ancestor`], from CSGID |
| . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . | |||||||
| # | Score | Template | Links and tools | %id | First | MNFKKGITAFLLGTVFVFSSVGVSEAYVKEGWKLPSKSATYKWGDRLDDGSSIIKSGWQAADSAWYTASRINFTVSASSVNTLNSWFESSSTYYGRMKTSYNTSTKKVTKFAGDINAGNTNITKSNVAKSTGVHEFGHAIGIGHNSGTSIMNSNRNRTTMHVPQTDDKNGVNAIY | Last |
| 1 | -5.980 | sp|Q5XUX0|FBX31_HUMAN F-box only protein 31 OS=Homo sapiens GN=FBXO31 PE=1 SV=2 | ali | 11 | 1 | ..................................................................................................................LRKLEITGVSCRDVYAKLLHRYRHILGLDIGPYGGLLNVVVDGLFIIDPHVDDPMRFKPLF | 72 |
| 2 | -5.700 | sp|Q8N2A0|CX062_HUMAN Putative uncharacterized protein encoded by LINC00269 OS=Homo sapiens GN=LINC00269 PE=5 SV=1 | ali | 14 | 142 | ...........................................................................................................................TSGDPPASASQSAG-ITGVSHSARPKSCF....................... | 169 |
| 3 | -5.600 | sp|Q8N122|RPTOR_HUMAN Regulatory-associated protein of mTOR OS=Homo sapiens GN=RPTOR PE=1 SV=1 | ali | 9 | 1 | .KDRMKTVSVALVLCLNVGVDPPDVVKTTPCARWIDPL-----SMGPQKALETIGANLQKQYENWQPRARYKQSLDPTVDE---------------------------------VKKLCTSLRRNAKEERVLFHYNGH--GVPRPTVNGEVWVFNKNYTQYIPLS-DCSNAGLIV | 152 |
| 4 | -5.600 | tr|F5H7J5|F5H7J5_HUMAN Uncharacterized protein OS=Homo sapiens GN=RPTOR PE=4 SV=1 | ali | 9 | 1 | .KDRMKTVSVALVLCLNVGVDPPDVVKTTPCARWIDPL-----SMGPQKALETIGANLQKQYENWQPRARYKQSLDPTVDE---------------------------------VKKLCTSLRRNAKEERVLFHYNGH--GVPRPTVNGEVWVFNKNYTQYIPLS-DCSNAGLIV | 152 |
| 5 | -5.570 | sp|Q3B7T1|EDRF1_HUMAN Erythroid differentiation-related factor 1 OS=Homo sapiens GN=EDRF1 PE=1 SV=1 | ali | 14 | 34 | ............................................................................................................................SKSHVSMAVHRIGRTLLLDELDIQELFMRSSQTGD................ | 68 |
| 6 | -5.140 | tr|F5GXN7|F5GXN7_HUMAN Uncharacterized protein OS=Homo sapiens PE=4 SV=1 | ali | 15 | 66 | ...........................................................................................................................TSGDLPTLASPSPG-ITGVGHCARLQMLFKCSSLSSPLIP............ | 104 |
| 7 | -5.020 | sp|Q9NX78|CN101_HUMAN UPF0679 protein C14orf101 OS=Homo sapiens GN=C14orf101 PE=1 SV=3 | ali | 12 | 34 | ...........................................................................................................................VCDQRTNYVIDKFAKNL-LTSMPHDAIIL-----------LRGDLPGNSLRY | 73 |
| 8 | -4.830 | sp|Q96D46|NMD3_HUMAN 60S ribosomal export protein NMD3 OS=Homo sapiens GN=NMD3 PE=1 SV=1 | ali | 14 | 97 | ................................................................................................................GEVWVQKTSEMNTDKQYFCRTH-LGHLLNPGDLDLANCNLNDEHVNKMNSDRVPDVVLIKKSY | 162 |
| 9 | -4.720 | tr|C9J0U9|C9J0U9_HUMAN Uncharacterized protein OS=Homo sapiens GN=TSSC1 PE=4 SV=1 | ali | 15 | 1 | ................................................................................................................................KNVLLHQAGEIWHISASPADRGVLTT..................... | 26 |
| 10 | -4.460 | tr|F8W9Z4|F8W9Z4_HUMAN Uncharacterized protein OS=Homo sapiens GN=AMBRA1 PE=4 SV=1 | ali | 14 | 60 | ...........................................................................................................................TSGDLPTSASQSAG-ITGVSHRAWPRLLE....................... | 87 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Plewczynski D, Tkacz A, Wyrwicz LS, Godzik A, Kloczkowski A, Rychlewski L. Support-vector-machine classification of linear functional motifs in proteins. J Mol Model 2006 Aug;12(4):453-61. Epub 2005 Dec 10. |