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Query: IDP05327 gene: alaS; alanyl-tRNA synthetase [Listeria monocytogenes EGD-e] lmo1504 [Listeria monocytogenes EGD-e], from CSGID

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKQLSSAEVRQLFLDFFKEKGHTIEPSAPLVPNNDPTILWINSGVATMKKYFDGSVIPDNPRMANAQKSIRTNDIENVGKTARHHTFFEMLGNFSIGDYFKEGAIVFAWEFLTSPKWIGFDPDKLYVTVYPEDEEAKTLWREKIGLSDDHIVEIEDNFWDIGIGPSGPDSEIFYDRGPAFGDDASDPELYPGGENERYLEIWNLVFSQFNHNPDGTYTPLPKQNIDTGMGLERMVSIIQDAPTNFETDLFMPIIREVEQIAGVKYGHSQENDVAFKVIADHIRTVAFAIGDGALPSNEGRGYILRRLLRRAVRYAKVLTINEPFMYKLVPVVGKIMNSFYPEVENQTDFIQKVIRTEEERFHETLNEGLAILETILKTAKETNEQVIKGADIFKLYDTFGFPVELTEEYAEDHGLKVDHAGFEAEMKEQRARARAARADVKSMQVQGELLANLTEKSAFVGYNSTEHVSEILYLIQNDTLVDEVAAGNEAQVIFKETPFYAESGGQVADKGTIESETGLAYVEDVQKAPNKQNLHRISVKEGVLKTGDTVKLAVDKVKRRETIKNHTATHLLHRALKDTLGEHVNQAGSLVSPDRLRFDFSHFGQITEEELTKMEEIVNEKIWEQINVVIEEMPIAEAKELGAMALFGEKYGDIVRVVQVGKYSIELCGGVHVRNTADIGLFKIVSETGIGAGTRRIEAVTGKEAYRFVTEQENTLKQAASLLKTTTKETPQKVELLQADLREVKRENESLLSKLASAASADIFESPEEIGGVKVIAKQVNAKDMNQLRQFVDNWKDKKIGGILVLGAVQGDKVNLISAVSEEAIKAGYHAGKLLKEVATRCGGNGGGRPDMAQAGGKNPAELGTALDYVSTWVKEQQALast
1 -5.260tr|F5H7J5|F5H7J5_HUMAN Uncharacterized protein OS=Homo sapiens GN=RPTOR PE=4 SV=1  ali   14  2..........KNCIQLAACEATELLPMIPDLPAD----LFTSCLTTPIKIALRWFCMQKCVSLVPGVTLDLIEKIPGRLNDRR-----TPLGE-----------LNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVASLFRNFL---AERIMRSYN---------CTPVSS----------------PRLPPTYMHAMWQAWDLA-------------------VDI---LSQLPTIIEEGTAFRHSPFFAEQLTAFQ............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 181
2 -5.170sp|Q8N122|RPTOR_HUMAN Regulatory-associated protein of mTOR OS=Homo sapiens GN=RPTOR PE=1 SV=1  ali   15  2..........KNCIQLAACEATELLPMIPDLPAD----LFTSCLTTPIKIALRWFCMQKCVSLVPGVTLDLIEKIPGRLNDRR-----TPLGE-----------LNWIFTAITDTIAWNVLPRDLFQKLFRQDLLVASLFRNFL---AERIMRSYN---------CTPVSS----------------PRLPPTYMHAMWQAWDLA-------------------VDI---LSQLPTIIEEGTAFRHSPFF..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 173
3 -5.170sp|O60242|BAI3_HUMAN Brain-specific angiogenesis inhibitor 3 OS=Homo sapiens GN=BAI3 PE=1 SV=2  ali   16  9.........................................................................................IYGSYSVSEMFPKNFTNCTW------------------TLENPDPTKYSIYLKF----------------SKKDLSCSNFSLLAY----QFDHFSHEKIKDLLRKNHSIMQLCNFVFLQYDKN........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 97
4 -5.140sp|Q8TAL6|FIBIN_HUMAN Fin bud initiation factor homolog OS=Homo sapiens GN=FIBIN PE=2 SV=1  ali   16  17.....................HYFVPDGDYEENDDPQLLFRVSDHRRCSQGEGSQVGSLLSLTLREEFTVLGRQVEDAGRVLEKSISYDLDGEESYGKYLRRES....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 105
5 -5.130sp|Q9H5I5|PIEZ2_HUMAN Piezo-type mechanosensitive ion channel component 2 OS=Homo sapiens GN=PIEZO2 PE=2 SV=2  ali   12  8...................................................................................................................................................................................................................................................................................................................................FTWVLFLATVDSFTTWLNSISREHIDISTVLRIERCMLTREIKKGNVPTRESIHMY.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 63
6 -5.080tr|E7EX13|E7EX13_HUMAN Uncharacterized protein OS=Homo sapiens GN=ALPK1 PE=4 SV=1  ali   11  17..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................LLPSELRTLIQEAKEMKWPFVPEK-----WQYKQAVGPEDKTNLKDVIGAGLQQLLASLRASILARDCAAAAAIVFLVDRFDVSGKLLQVAKGLHKLQPATPIAPQ------VVIRQARISVNSGSHPA.................................................................................................................................................................................... 138
7 -4.950sp|O60241|BAI2_HUMAN Brain-specific angiogenesis inhibitor 2 OS=Homo sapiens GN=BAI2 PE=2 SV=2  ali   17  15........................................................................................VLYGAFSLQDLFPTIASGCSW------------------TLENPDPTKYSLYLRFNRQEQVRLLPL-DHY--LVNFTCLRPSP.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 82
8 -4.740sp|Q5T9L3|WLS_HUMAN Protein wntless homolog OS=Homo sapiens GN=WLS PE=1 SV=2  ali   18  23..........................................................................................................................................................HKTKWFVPWGP-NHCDKI----------------RDIEEAIPREIEANDIVFS----------VHIPLPHMEMSPWFQFMLFILQ-LDIAFKLNNQIRENAEVSMDVSLAYRDDAFAEWTEMAHERVPRKLKCTFTSPKTPEHEGR................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 140
9 -4.670tr|E9PG74|E9PG74_HUMAN Uncharacterized protein OS=Homo sapiens GN=TPCN2 PE=4 SV=2  ali   13  2........................................................................................................................................................................................................................................................................................................SQFRGYLMKSLQTSLFR--RRLGTRAAF--EVLSSMVGEGGAFPQAVGVKPQNLLQVLQK--------VQLDSSHKQAMMEKVRSYGSVLLSAEEFQKLFNEL................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 92
10 -4.470sp|Q9H665|IGFR1_HUMAN IGF-like family receptor 1 OS=Homo sapiens GN=IGFLR1 PE=1 SV=1  ali   9  8............................................................................................................................................................EYWNPDNKCCSSCLQRF---------------GPPPCPDYEFRE--NCGLNDHGDFVTPPFRKCSSGQCNPD........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 62
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Schwarzenbacher R, Godzik A, Jaroszewski L. The JCSG MR pipeline: optimized alignments, multiple models and parallel searches. Acta Crystallogr D Biol Crystallogr. 2008 Jan;64(Pt 1):133-40. Epub 2007 Dec 5.